RchiOBHm_Chr5g0030631

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000079
Physical Location & Seq
Reverse (-)
24275326 .. 24277563
2238 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ30995

Sequence Viewer

Length: 1374 bp
ATGACTATGCAAATGGGTTCGAAGTCCAACTCGAAGCCCGGTCAAGATAGGATCAGTGGCTTACCCGATGAGATTCTTTGCCACATTCTTTCCTTCACTTCCACAGTTGATGCTGTGAAGGCCAGCGTTTTGTCTCGTAGATGGGAGAATATGTGGCTGCGTGTTCCCACTTTGTACTTAAGTGATGATGACTTTCGCAGTGATGAAAGAGAATTCGACCCAGAGCGTTTTGTGGCCTTTGTGGACCGTGCACTTTTCCTCCGTGGCTCCTCAAGCATTCATAGAATCTCTATTAGATGTAGTGATACGGAGAATTATCCTCATCTTGATGAGTGGATTTGCACTGCAATTAGGGGTAATGTTGTCGAACTTGAACTTGATCTTCATGAGTCTGATTTTCAATATGAGCCTCTTGAGTTGCCTAGAAGCCTTTTCATGTCCAGGAGTTTGGTGGTTTTGAAGCTGACGCTGGAAGAGAATTATGTTGCAATTCCTCCCAGCTCAGATTGTTTTCCATGTCTCAAGCTTCTTGATGTTTCAGTCTTTTATCCTGATCCTGCCACAATGGAGAGTCTCTTTACTTGTGGTCCTGTACTTGAACACTTGATCATAGAGGGATATCTTGGTGAGGACCAATATTTGAATTTCAACATCTTTGCACCTAAACTAAAAAGACTGGAACTGAGATTTGATCCATGTGATGAAGTTGATTCTGTGTCCAACATTTTGTTTAATGTCAACGCTCCTAAGCTTGAAAGGTTAGATCTGAATGAGAACTTTTTGGCGAGCTATTGTCTGAGTGAAAATGCCCTAAGTGAAGCCAACATTAGTTTCAGTGACCTGCATTCGGACATTCAATTCATCACTGGTTCTGTTGACCATATACAAAGGCTTTTTGAAGGGATTGTCAATGTCAAACATCTGTCACTTCAAGCTCCATTTTTAGGGGATCCGGACACTGAAAGTCGTTGTAATCTGCCTAAACTAAATAATTTGAAGCATTTGGAGCTACAACTGGAAAACTGCTGCTCTTGGCAATTACTGACCAGATTGCTCACTATATCGCCAAATCTGGAATATCTTGTACTGGAAATTAACATACAATGTTGTGAGTATCCTAACGAGGATGGCTGGTCTCCACCAAAGCTTGTGCCTATTTGTTTGGTCTCATGCCTTAAAAATCTGTTCATACGCGGATTCAAGGGAAAGCCAGATGATATAGAAGTTGCAAAGTACTTGTTGAAGCATGGTGAAGTCTTGAATAATGTAACAATTTATTCTTATGATGTCCCTGCAGAAGACATGTTGAAGGTATCCCAAGAAATAAAGGGTTCAAACACTTGTCAAGTCGAATTTCCAAAGATTGATATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

457

Amino Acids

52.19

Weight (kDa)

4.72

Isoelectric Point (pI)

43.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 18 - 55 7.9e-08 F-box domain
LRR_At1g61320_AtMIF1 PF23622 97 - 427 9.5e-08 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 109 - 262 8e-12 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 381 - 425 5.6e-11 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 849
AccII CGCG 1 cut(s) 1194
AccIII TCCGGA 1 cut(s) 952
AciI CCGC 1 cut(s) 1194
AclWI GGATC 5 cut(s) 59, 548, 686, 944, 957
AcsI RAATTY 3 cut(s) 212, 643, 1352
AfaI GTAC 4 cut(s) 176, 594, 1086, 1235
AfiI CCNNNNNNNGG 2 cut(s) 847, 944
AflII CTTAAG 1 cut(s) 178
AflIII ACRYGT 1 cut(s) 1302
AjnI CCWGG 1 cut(s) 440
AjuI GAANNNNNNNTTGG 2 cut(s) 815, 847
AluBI AGCT 8 cut(s) 463, 501, 526, 751, 789, 935, 1009, 1147
AluI AGCT 8 cut(s) 463, 501, 526, 751, 789, 935, 1009, 1147
Alw21I GWGCWC 1 cut(s) 253
Alw26I GTCTC 5 cut(s) 138, 524, 578, 1140, 1171
Alw44I GTGCAC 1 cut(s) 249
AlwI GGATC 5 cut(s) 59, 548, 686, 944, 957
Aor13HI TCCGGA 1 cut(s) 952
AoxI GGCC 2 cut(s) 120, 234
ApaLI GTGCAC 1 cut(s) 249
ApeKI GCWGC 2 cut(s) 157, 1026
ApoI RAATTY 3 cut(s) 212, 643, 1352
AspS9I GGNCC 3 cut(s) 244, 587, 631
AsuC2I CCSGG 1 cut(s) 39
AsuHPI GGTGA 2 cut(s) 638, 1262
AsuII TTCGAA 1 cut(s) 20
AvaII GGWCC 3 cut(s) 244, 587, 631
BaeGI GKGCMC 1 cut(s) 253
BamHI GGATCC 1 cut(s) 949
BbsI GAAGAC 1 cut(s) 1305
Bbv12I GWGCWC 1 cut(s) 253
BbvI GCAGC 2 cut(s) 144, 1013
BccI CCATC 2 cut(s) 135, 1121
BciT130I CCWGG 1 cut(s) 442
BciVI GTATCC 2 cut(s) 1125, 1324
BclI TGATCA 1 cut(s) 606
BcnI CCSGG 1 cut(s) 39
BcoDI GTCTC 5 cut(s) 138, 524, 578, 1140, 1171
BfaI CTAG 1 cut(s) 423
BfmI CTRYAG 1 cut(s) 1293
BfrI CTTAAG 1 cut(s) 178
BfuAI ACCTGC 1 cut(s) 849
BfuI GTATCC 2 cut(s) 1125, 1324
BglII AGATCT 1 cut(s) 763
BisI GCNGC 2 cut(s) 158, 1027
BlsI GCNGC 2 cut(s) 159, 1028
BmcAI AGTACT 1 cut(s) 1235
Bme1390I CCNGG 2 cut(s) 39, 442
Bme18I GGWCC 3 cut(s) 244, 587, 631
BmgT120I GGNCC 3 cut(s) 244, 587, 631
BmiI GGNNCC 2 cut(s) 268, 951
BmrFI CCNGG 2 cut(s) 39, 442
BmsI GCATC 1 cut(s) 100
BpiI GAAGAC 1 cut(s) 1305
Bpu10I CCTNAGC 1 cut(s) 747
Bpu14I TTCGAA 1 cut(s) 20
BpuEI CTTGAG 3 cut(s) 256, 434, 506
BpuMI CCSGG 1 cut(s) 39
BsaI GGTCTC 2 cut(s) 1140, 1171
BsaJI CCNNGG 1 cut(s) 262
BsaWI WCCGGW 1 cut(s) 952
BsaXI ACNNNNNCTCC 4 cut(s) 137, 167, 243, 273
Bsc4I CCNNNNNNNGG 2 cut(s) 847, 944
Bse1I ACTGG 4 cut(s) 681, 871, 1020, 1092
BseAI TCCGGA 1 cut(s) 952
BseBI CCWGG 1 cut(s) 442
BseDI CCNNGG 1 cut(s) 262
BseGI GGATG 1 cut(s) 1132
BseLI CCNNNNNNNGG 2 cut(s) 847, 944
BseMII CTCAG 3 cut(s) 516, 674, 788
BseNI ACTGG 4 cut(s) 681, 871, 1020, 1092
BseRI GAGGAG 1 cut(s) 259
BseSI GKGCMC 1 cut(s) 253
BseXI GCAGC 2 cut(s) 144, 1013
BseYI CCCAGC 1 cut(s) 497
Bsh1236I CGCG 1 cut(s) 1194
BshFI GGCC 2 cut(s) 122, 236
BsiHKAI GWGCWC 1 cut(s) 253
BsiSI CCGG 2 cut(s) 39, 953
BslFI GGGAC 1 cut(s) 1274
BslI CCNNNNNNNGG 2 cut(s) 847, 944
BsmAI GTCTC 5 cut(s) 138, 524, 578, 1140, 1171
BsmFI GGGAC 1 cut(s) 1274
BsmI GAATGC 2 cut(s) 276, 844
BsnI GGCC 2 cut(s) 122, 236
Bso31I GGTCTC 2 cut(s) 1140, 1171
Bsp119I TTCGAA 1 cut(s) 20
Bsp1286I GDGCHC 1 cut(s) 253
Bsp13I TCCGGA 1 cut(s) 952
Bsp143I GATC 7 cut(s) 51, 379, 553, 606, 691, 763, 949
BspACI CCGC 1 cut(s) 1194
BspANI GGCC 2 cut(s) 122, 236
BspCNI CTCAG 3 cut(s) 515, 675, 789
BspEI TCCGGA 1 cut(s) 952
BspFNI CGCG 1 cut(s) 1194
BspHI TCATGA 1 cut(s) 385
BspLI GGNNCC 2 cut(s) 268, 951
BspMAI CTGCAG 1 cut(s) 1297
BspMI ACCTGC 1 cut(s) 849
BspPI GGATC 5 cut(s) 59, 548, 686, 944, 957
BspT104I TTCGAA 1 cut(s) 20
BspTI CTTAAG 1 cut(s) 178
BspTNI GGTCTC 2 cut(s) 1140, 1171
BsrI ACTGG 4 cut(s) 681, 871, 1020, 1092
BssECI CCNNGG 1 cut(s) 262
BssMI GATC 7 cut(s) 51, 379, 553, 606, 691, 763, 949
Bst2UI CCWGG 1 cut(s) 442
Bst4CI ACNGT 2 cut(s) 106, 248
Bst6I CTCTTC 1 cut(s) 468
BstAFI CTTAAG 1 cut(s) 178
BstBI TTCGAA 1 cut(s) 20
BstC8I GCNNGC 2 cut(s) 124, 787
BstDEI CTNAG 5 cut(s) 502, 683, 747, 797, 812
BstDSI CCRYGG 1 cut(s) 262
BstF5I GGATG 1 cut(s) 1132
BstFNI CGCG 1 cut(s) 1194
BstKTI GATC 7 cut(s) 54, 382, 556, 609, 694, 766, 952
BstMAI GTCTC 5 cut(s) 138, 524, 578, 1140, 1171
BstMBI GATC 7 cut(s) 51, 379, 553, 606, 691, 763, 949
BstMWI GCNNNNNNNGC 3 cut(s) 119, 273, 1006
BstNI CCWGG 1 cut(s) 442
BstNSI RCATGY 1 cut(s) 1306
BstSCI CCNGG 2 cut(s) 37, 440
BstSFI CTRYAG 1 cut(s) 1293
BstSLI GKGCMC 1 cut(s) 253
BstUI CGCG 1 cut(s) 1194
BstV1I GCAGC 2 cut(s) 144, 1013
BstV2I GAAGAC 1 cut(s) 1305
BstX2I RGATCY 2 cut(s) 763, 949
BstXI CCANNNNNNTGG 1 cut(s) 448
BstYI RGATCY 2 cut(s) 763, 949
BsuI GTATCC 2 cut(s) 1125, 1324
BsuRI GGCC 2 cut(s) 122, 236
BtgI CCRYGG 1 cut(s) 262
BtsCI GGATG 1 cut(s) 1132
BtsI GCAGTG 2 cut(s) 205, 342
BtsIMutI CAGTG 6 cut(s) 61, 205, 342, 841, 864, 957
BveI ACCTGC 1 cut(s) 849
Cac8I GCNNGC 2 cut(s) 124, 787
CciI TCATGA 1 cut(s) 385
Cfr13I GGNCC 3 cut(s) 244, 587, 631
CseI GACGC 1 cut(s) 475
Csp6I GTAC 4 cut(s) 175, 593, 1085, 1234
CviAII CATG 7 cut(s) 386, 436, 516, 696, 1170, 1247, 1303
CviQI GTAC 4 cut(s) 175, 593, 1085, 1234
DdeI CTNAG 5 cut(s) 502, 683, 747, 797, 812
DpnI GATC 7 cut(s) 53, 381, 555, 608, 693, 765, 951
DpnII GATC 7 cut(s) 51, 379, 553, 606, 691, 763, 949
Eam1104I CTCTTC 1 cut(s) 468
EarI CTCTTC 1 cut(s) 468
Eco31I GGTCTC 2 cut(s) 1140, 1171
Eco32I GATATC 1 cut(s) 620
Eco47I GGWCC 3 cut(s) 244, 587, 631
EcoRI GAATTC 1 cut(s) 212
EcoRII CCWGG 1 cut(s) 440
EcoRV GATATC 1 cut(s) 620
FaeI CATG 7 cut(s) 389, 439, 519, 699, 1173, 1250, 1306
FaqI GGGAC 1 cut(s) 1274
FatI CATG 7 cut(s) 385, 435, 515, 695, 1169, 1246, 1302
FbaI TGATCA 1 cut(s) 606
Fnu4HI GCNGC 2 cut(s) 158, 1027
FokI GGATG 1 cut(s) 1139
Fsp4HI GCNGC 2 cut(s) 158, 1027
FspBI CTAG 1 cut(s) 423
GluI GCNGC 2 cut(s) 158, 1027
GsaI CCCAGC 1 cut(s) 501
HaeIII GGCC 2 cut(s) 122, 236
HapII CCGG 2 cut(s) 39, 953
HgaI GACGC 1 cut(s) 475
Hin1II CATG 7 cut(s) 389, 439, 519, 699, 1173, 1250, 1306
HincII GTYRAC 2 cut(s) 739, 877
HindII GTYRAC 2 cut(s) 739, 877
HindIII AAGCTT 3 cut(s) 524, 749, 1145
HinfI GANTC 6 cut(s) 73, 285, 389, 571, 710, 1197
HpaII CCGG 2 cut(s) 39, 953
HphI GGTGA 2 cut(s) 638, 1262
Hpy166II GTNNAC 4 cut(s) 244, 251, 739, 877
Hpy188I TCNGA 5 cut(s) 394, 505, 768, 798, 850
Hpy188III TCNNGA 9 cut(s) 44, 326, 386, 413, 530, 551, 953, 1073, 1258
Hpy8I GTNNAC 4 cut(s) 244, 251, 739, 877
HpyAV CCTTC 4 cut(s) 103, 112, 893, 1303
HpyCH4III ACNGT 2 cut(s) 106, 248
HpyCH4V TGCA 9 cut(s) 10, 251, 342, 347, 488, 659, 844, 1229, 1295
HpyF10VI GCNNNNNNNGC 3 cut(s) 119, 273, 1006
HpyF3I CTNAG 5 cut(s) 502, 683, 747, 797, 812
Hsp92II CATG 7 cut(s) 389, 439, 519, 699, 1173, 1250, 1306
Kpn2I TCCGGA 1 cut(s) 952
Ksp22I TGATCA 1 cut(s) 606
Kzo9I GATC 7 cut(s) 51, 379, 553, 606, 691, 763, 949
LmnI GCTCC 4 cut(s) 272, 748, 940, 1006
Lsp1109I GCAGC 2 cut(s) 144, 1013
LweI GCATC 1 cut(s) 100
MaeI CTAG 1 cut(s) 423
MaeIII GTNAC 3 cut(s) 836, 924, 1267
MalI GATC 7 cut(s) 53, 381, 555, 608, 693, 765, 951
MboI GATC 7 cut(s) 51, 379, 553, 606, 691, 763, 949
MboII GAAGA 3 cut(s) 374, 485, 1310
MflI RGATCY 2 cut(s) 763, 949
MhlI GDGCHC 1 cut(s) 253
MlyI GAGTC 2 cut(s) 398, 580
MmeI TCCRAC 2 cut(s) 51, 744
MnlI CCTC 8 cut(s) 269, 280, 330, 420, 504, 607, 622, 1117
MroI TCCGGA 1 cut(s) 952
MseI TTAA 4 cut(s) 179, 732, 1095, 1176
MslI CAYNNNNRTG 1 cut(s) 327
MspCI CTTAAG 1 cut(s) 178
MspI CCGG 2 cut(s) 39, 953
MspR9I CCNGG 2 cut(s) 39, 442
Mva1269I GAATGC 2 cut(s) 276, 844
MvaI CCWGG 1 cut(s) 442
MvnI CGCG 1 cut(s) 1194
MwoI GCNNNNNNNGC 3 cut(s) 119, 273, 1006
NciI CCSGG 1 cut(s) 39
NdeII GATC 7 cut(s) 51, 379, 553, 606, 691, 763, 949
NlaIII CATG 7 cut(s) 389, 439, 519, 699, 1173, 1250, 1306
NlaIV GGNNCC 2 cut(s) 268, 951
NmuCI GTSAC 2 cut(s) 836, 924
NspI RCATGY 1 cut(s) 1306
NspV TTCGAA 1 cut(s) 20
PagI TCATGA 1 cut(s) 385
PciI ACATGT 1 cut(s) 1302
PctI GAATGC 2 cut(s) 276, 844
PfeI GAWTC 4 cut(s) 73, 285, 710, 1197
PfoI TCCNGGA 1 cut(s) 440
PkrI GCNGC 2 cut(s) 159, 1028
PleI GAGTC 2 cut(s) 397, 579
PpsI GAGTC 2 cut(s) 397, 579
PscI ACATGT 1 cut(s) 1302
Psp6I CCWGG 1 cut(s) 440
PspFI CCCAGC 1 cut(s) 497
PspGI CCWGG 1 cut(s) 440
PspN4I GGNNCC 2 cut(s) 268, 951
PspPI GGNCC 3 cut(s) 244, 587, 631
PstI CTGCAG 1 cut(s) 1297
PsuI RGATCY 2 cut(s) 763, 949
RsaI GTAC 4 cut(s) 176, 594, 1086, 1235
RsaNI GTAC 4 cut(s) 175, 593, 1085, 1234
RseI CAYNNNNRTG 1 cut(s) 327
SaqAI TTAA 4 cut(s) 179, 732, 1095, 1176
SatI GCNGC 2 cut(s) 158, 1027
Sau3AI GATC 7 cut(s) 51, 379, 553, 606, 691, 763, 949
Sau96I GGNCC 3 cut(s) 244, 587, 631
ScaI AGTACT 1 cut(s) 1235
SchI GAGTC 2 cut(s) 398, 580
ScrFI CCNGG 2 cut(s) 39, 442
SduI GDGCHC 1 cut(s) 253
SfaNI GCATC 1 cut(s) 100
SfcI CTRYAG 1 cut(s) 1293
SfuI TTCGAA 1 cut(s) 20
SinI GGWCC 3 cut(s) 244, 587, 631
SmiMI CAYNNNNRTG 1 cut(s) 327
SmlI CTYRAG 4 cut(s) 178, 271, 413, 521
SmoI CTYRAG 4 cut(s) 178, 271, 413, 521
SsiI CCGC 1 cut(s) 1194
SspI AATATT 1 cut(s) 638
SspMI CTAG 1 cut(s) 423
StyD4I CCNGG 2 cut(s) 37, 440
TaaI ACNGT 2 cut(s) 106, 248
TaqI TCGA 5 cut(s) 20, 32, 216, 366, 1350
TatI WGTACW 4 cut(s) 174, 592, 1084, 1233
TfiI GAWTC 4 cut(s) 73, 285, 710, 1197
Tru1I TTAA 4 cut(s) 179, 732, 1095, 1176
Tru9I TTAA 4 cut(s) 179, 732, 1095, 1176
TscAI CASTG 6 cut(s) 61, 205, 349, 841, 871, 964
TseFI GTSAC 2 cut(s) 836, 924
TseI GCWGC 2 cut(s) 157, 1026
Tsp45I GTSAC 2 cut(s) 836, 924
TspDTI ATGAA 7 cut(s) 219, 269, 374, 424, 717, 850, 1177
TspGWI ACGGA 2 cut(s) 251, 323
TspRI CASTG 6 cut(s) 61, 205, 349, 841, 871, 964
Vha464I CTTAAG 1 cut(s) 178
VneI GTGCAC 1 cut(s) 249
VpaK11BI GGWCC 3 cut(s) 244, 587, 631
XapI RAATTY 3 cut(s) 212, 643, 1352
XceI RCATGY 1 cut(s) 1306
XcmI CCANNNNNNNNNTGG 1 cut(s) 448
XspI CTAG 1 cut(s) 423
ZrmI AGTACT 1 cut(s) 1235
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.