Rw3G007530

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0000079
Physical Location & Seq
Reverse (-)
6925477 .. 6927206
1730 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G007530.1

Sequence Viewer

Length: 1347 bp
ATGGGTTCAAACTCAAAGCTTTTTAAAGCATGTATTGAAGATAGGATCAGTGGATTGCCAGATGCAATTTTTTTTCACATTACTTCATTCCTTGAAACAAGAGATGCTGTAAAGACCTGCCTATTATCTCATACATGGAACAATGTGTGGACTTATGTTCCGAATCTAGAGGTATATGTATCTTCACCGAAATATGACTCAGATGAACATGTGCCTCAAGCCGGGTTTGTTGATAGAGTACTTCTGTTCCGTAACTTGTCAAACATTCATAAATTCAGTCTTATCTGCCTTGGAATCGAAGATTATTTTGATCGTATTGATGCTTGGGTTTGCACTGCCATTAGGCGAAATGTTGTAGAACTTAATCTTGATCTTTATACCACACCCTCAAATTCCTACGAAGGGTGTCTTAAGTTGCCTACAAGCATTTTCATTTGCAAGACACTGGTAGTTTTGAAGCTGATACTAACAGATCAGGTTATTGCTATTCCTCCTAACTGGAGTTGTTTTCCAAGTCTCAAGTACCTTGATGTTCAGGTATATTATCCTGTTGCTGTCGATGCATTGGCAAAACTGTTTTCATGTTGTTTCTCTGCACTTGAAGATTTAATTATACATGGAAATCTCGGAAGACTTAGAGATGATGAAGTTTTGAACTTAACTATCTCTGCTCCTAAACTCAAAAGACTACAGATAAAATTCTGTGCTGTACGGTATGAGTACAAAAATTTTGTTAATGCTAATGCTCCAAACCTCGAAAAGTTCAATGTCGAGTACCTCTTGGCAAGCTATTCTTTGAAGAATGTAAAATCGCTAAGCACAGTTGAGCTTAAATTCAAAGGTCTGCATGCGGGAGAGAACCTATATTTTGCTGATCGTATACATAAGCTCTTTGCAGAAATCGTGAATGTCAAATATTTGATCCTGACATTGCATATCAATGTGCATGCTATGCCTACGTTCAATAATTTGAACCAGTTGGAGCTACGTCTTCAAACTTGCTGCTCTTGGCAATCACTGCCAATTTTTCTCAATGCGTCACCCAATCTGGAATATCTTCTGTTGGAGAATATGACTTGGTACATGAATGGTTTCCTCCCGAGGTTGTTCCTATTTGTTTGTTGTCATGCCTATAGACTATTCACATACGGGGATTTCGAGGACGTACGGATCGATGAGATGGAAGTCGCAGGGTACTTGTTGAAGCACGGGAAGGTTTTGAACAAGGTGACAATTCATACTTCTAATTTCTGTCAAGAATCAGTAATGGAGTTGTGGCAGATATTTTCAAGGCTCCCTAGGGGTTCAAAGACTTGTGAAATTGAATGGATCCTTCCAAAGTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

448

Amino Acids

51.7

Weight (kDa)

6.85

Isoelectric Point (pI)

34.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At5g56370 PF24758 106 - 315 4e-10 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 125
AccI GTMKAC 1 cut(s) 880
AciI CCGC 1 cut(s) 851
AclWI GGATC 5 cut(s) 53, 916, 1178, 1324, 1337
AcsI RAATTY 5 cut(s) 272, 391, 698, 727, 833
AfaI GTAC 8 cut(s) 240, 524, 711, 722, 776, 1082, 1167, 1196
AfiI CCNNNNNNNGG 2 cut(s) 221, 402
AflII CTTAAG 1 cut(s) 410
AflIII ACRYGT 1 cut(s) 208
AluBI AGCT 6 cut(s) 19, 460, 789, 829, 889, 985
AluI AGCT 6 cut(s) 19, 460, 789, 829, 889, 985
Alw26I GTCTC 1 cut(s) 521
AlwI GGATC 5 cut(s) 53, 916, 1178, 1324, 1337
Ama87I CYCGRG 1 cut(s) 1099
ApeKI GCWGC 1 cut(s) 1002
ApoI RAATTY 5 cut(s) 272, 391, 698, 727, 833
Asp700I GAANNNNTTC 2 cut(s) 1056, 1091
AspA2I CCTAGG 1 cut(s) 1298
AsuC2I CCSGG 1 cut(s) 223
AsuHPI GGTGA 3 cut(s) 177, 1032, 1240
AvaI CYCGRG 1 cut(s) 1099
AvrII CCTAGG 1 cut(s) 1298
BamHI GGATCC 1 cut(s) 1329
BbsI GAAGAC 2 cut(s) 637, 983
BbvI GCAGC 1 cut(s) 989
BccI CCATC 1 cut(s) 1174
BcnI CCSGG 1 cut(s) 223
BcoDI GTCTC 1 cut(s) 521
BfaI CTAG 2 cut(s) 167, 1299
BfmI CTRYAG 2 cut(s) 689, 1132
BfrI CTTAAG 1 cut(s) 410
BfuAI ACCTGC 1 cut(s) 125
BisI GCNGC 1 cut(s) 1003
BlnI CCTAGG 1 cut(s) 1298
BlpI GCTNAGC 1 cut(s) 815
BlsI GCNGC 1 cut(s) 1004
BmcAI AGTACT 1 cut(s) 240
Bme1390I CCNGG 1 cut(s) 223
BmeT110I CYCGRG 1 cut(s) 1099
BmiI GGNNCC 2 cut(s) 1295, 1331
BmrFI CCNGG 1 cut(s) 223
BmsI GCATC 4 cut(s) 52, 94, 310, 550
BpiI GAAGAC 2 cut(s) 637, 983
BpmI CTGGAG 1 cut(s) 520
Bpu1102I GCTNAGC 1 cut(s) 815
BpuEI CTTGAG 2 cut(s) 201, 503
BpuMI CCSGG 1 cut(s) 223
Bsa29I ATCGAT 1 cut(s) 1173
BsaJI CCNNGG 3 cut(s) 289, 1100, 1298
Bsc4I CCNNNNNNNGG 2 cut(s) 221, 402
Bse1I ACTGG 3 cut(s) 450, 503, 976
Bse3DI GCAATG 1 cut(s) 929
BseCI ATCGAT 1 cut(s) 1173
BseDI CCNNGG 3 cut(s) 289, 1100, 1298
BseLI CCNNNNNNNGG 2 cut(s) 221, 402
BseMI GCAATG 1 cut(s) 929
BseMII CTCAG 1 cut(s) 213
BseNI ACTGG 3 cut(s) 450, 503, 976
BseXI GCAGC 1 cut(s) 989
BsgI GTGCAG 1 cut(s) 579
BshVI ATCGAT 1 cut(s) 1173
BsiHKCI CYCGRG 1 cut(s) 1099
BsiSI CCGG 1 cut(s) 222
BsiWI CGTACG 1 cut(s) 1165
BslI CCNNNNNNNGG 2 cut(s) 221, 402
BsmAI GTCTC 1 cut(s) 521
BsoBI CYCGRG 1 cut(s) 1099
Bsp143I GATC 8 cut(s) 45, 310, 370, 472, 874, 921, 1170, 1329
Bsp1720I GCTNAGC 1 cut(s) 815
BspACI CCGC 1 cut(s) 851
BspCNI CTCAG 1 cut(s) 212
BspDI ATCGAT 1 cut(s) 1173
BspLI GGNNCC 2 cut(s) 1295, 1331
BspMI ACCTGC 1 cut(s) 125
BspPI GGATC 5 cut(s) 53, 916, 1178, 1324, 1337
BspTI CTTAAG 1 cut(s) 410
BsrDI GCAATG 1 cut(s) 929
BsrI ACTGG 3 cut(s) 450, 503, 976
BssECI CCNNGG 3 cut(s) 289, 1100, 1298
BssMI GATC 8 cut(s) 45, 310, 370, 472, 874, 921, 1170, 1329
BssNAI GTATAC 1 cut(s) 881
BssT1I CCWWGG 2 cut(s) 289, 1298
Bst1107I GTATAC 1 cut(s) 881
Bst4CI ACNGT 3 cut(s) 576, 714, 823
BstAFI CTTAAG 1 cut(s) 410
BstAPI GCANNNNNTGC 2 cut(s) 952, 1018
BstC8I GCNNGC 3 cut(s) 787, 849, 948
BstDEI CTNAG 3 cut(s) 199, 635, 815
BstKTI GATC 8 cut(s) 48, 313, 373, 475, 877, 924, 1173, 1332
BstMAI GTCTC 1 cut(s) 521
BstMBI GATC 8 cut(s) 45, 310, 370, 472, 874, 921, 1170, 1329
BstMWI GCNNNNNNNGC 3 cut(s) 560, 952, 1018
BstNSI RCATGY 4 cut(s) 33, 212, 851, 950
BstSCI CCNGG 1 cut(s) 221
BstSFI CTRYAG 2 cut(s) 689, 1132
BstV1I GCAGC 1 cut(s) 989
BstV2I GAAGAC 2 cut(s) 637, 983
BstX2I RGATCY 1 cut(s) 1329
BstYI RGATCY 1 cut(s) 1329
BstZ17I GTATAC 1 cut(s) 881
Bsu15I ATCGAT 1 cut(s) 1173
BsuTUI ATCGAT 1 cut(s) 1173
BtsI GCAGTG 2 cut(s) 333, 1016
BtsIMutI CAGTG 4 cut(s) 55, 333, 443, 1016
BveI ACCTGC 1 cut(s) 125
Cac8I GCNNGC 3 cut(s) 787, 849, 948
ClaI ATCGAT 1 cut(s) 1173
CseI GACGC 1 cut(s) 1026
Csp6I GTAC 8 cut(s) 239, 523, 710, 721, 775, 1081, 1166, 1195
CviAII CATG 9 cut(s) 30, 135, 209, 582, 617, 848, 947, 1084, 1127
CviJI RGCY 8 cut(s) 19, 221, 460, 789, 829, 889, 985, 1294
CviKI_1 RGCY 8 cut(s) 19, 221, 460, 789, 829, 889, 985, 1294
CviQI GTAC 8 cut(s) 239, 523, 710, 721, 775, 1081, 1166, 1195
DdeI CTNAG 3 cut(s) 199, 635, 815
DpnI GATC 8 cut(s) 47, 312, 372, 474, 876, 923, 1172, 1331
DpnII GATC 8 cut(s) 45, 310, 370, 472, 874, 921, 1170, 1329
DraI TTTAAA 1 cut(s) 25
Eco130I CCWWGG 2 cut(s) 289, 1298
Eco88I CYCGRG 1 cut(s) 1099
EcoT14I CCWWGG 2 cut(s) 289, 1298
EcoT22I ATGCAT 1 cut(s) 565
ErhI CCWWGG 2 cut(s) 289, 1298
FaeI CATG 9 cut(s) 33, 138, 212, 585, 620, 851, 950, 1087, 1130
FalI AAGNNNNNCTT 4 cut(s) 393, 425, 778, 810
FatI CATG 9 cut(s) 29, 134, 208, 581, 616, 847, 946, 1083, 1126
FauI CCCGC 1 cut(s) 844
FblI GTMKAC 1 cut(s) 880
Fnu4HI GCNGC 1 cut(s) 1003
Fsp4HI GCNGC 1 cut(s) 1003
FspBI CTAG 2 cut(s) 167, 1299
GluI GCNGC 1 cut(s) 1003
GsuI CTGGAG 1 cut(s) 520
HapII CCGG 1 cut(s) 222
HgaI GACGC 1 cut(s) 1026
Hin1II CATG 9 cut(s) 33, 138, 212, 585, 620, 851, 950, 1087, 1130
HindIII AAGCTT 1 cut(s) 17
HinfI GANTC 4 cut(s) 163, 197, 294, 1259
HpaII CCGG 1 cut(s) 222
HphI GGTGA 3 cut(s) 177, 1032, 1240
Hpy166II GTNNAC 2 cut(s) 150, 881
Hpy188I TCNGA 3 cut(s) 162, 202, 629
Hpy188III TCNNGA 7 cut(s) 167, 368, 904, 925, 1049, 1099, 1256
Hpy8I GTNNAC 2 cut(s) 150, 881
HpyAV CCTTC 3 cut(s) 395, 1207, 1343
HpyCH4III ACNGT 3 cut(s) 576, 714, 823
HpyCH4IV ACGT 3 cut(s) 959, 988, 1164
HpyCH4V TGCA 9 cut(s) 65, 333, 438, 563, 596, 847, 896, 934, 946
HpyF10VI GCNNNNNNNGC 3 cut(s) 560, 952, 1018
HpyF3I CTNAG 3 cut(s) 199, 635, 815
HpySE526I ACGT 3 cut(s) 959, 988, 1164
Hsp92II CATG 9 cut(s) 33, 138, 212, 585, 620, 851, 950, 1087, 1130
Kzo9I GATC 8 cut(s) 45, 310, 370, 472, 874, 921, 1170, 1329
LmnI GCTCC 4 cut(s) 676, 751, 982, 1299
Lsp1109I GCAGC 1 cut(s) 989
LweI GCATC 4 cut(s) 52, 94, 310, 550
MaeI CTAG 2 cut(s) 167, 1299
MaeII ACGT 3 cut(s) 959, 988, 1164
MaeIII GTNAC 3 cut(s) 251, 1038, 1228
MalI GATC 8 cut(s) 47, 312, 372, 474, 876, 923, 1172, 1331
MboI GATC 8 cut(s) 45, 310, 370, 472, 874, 921, 1170, 1329
MboII GAAGA 8 cut(s) 50, 174, 311, 614, 642, 811, 983, 1049
MflI RGATCY 1 cut(s) 1329
MlyI GAGTC 1 cut(s) 191
MmeI TCCRAC 2 cut(s) 960, 1044
MnlI CCTC 9 cut(s) 163, 225, 397, 501, 764, 788, 1095, 1106, 1153
Mph1103I ATGCAT 1 cut(s) 565
MroXI GAANNNNTTC 2 cut(s) 1056, 1091
MseI TTAA 7 cut(s) 24, 363, 411, 608, 659, 735, 831
MslI CAYNNNNRTG 1 cut(s) 939
MspCI CTTAAG 1 cut(s) 410
MspI CCGG 1 cut(s) 222
MspR9I CCNGG 1 cut(s) 223
MwoI GCNNNNNNNGC 3 cut(s) 560, 952, 1018
NciI CCSGG 1 cut(s) 223
NdeII GATC 8 cut(s) 45, 310, 370, 472, 874, 921, 1170, 1329
NlaIII CATG 9 cut(s) 33, 138, 212, 585, 620, 851, 950, 1087, 1130
NlaIV GGNNCC 2 cut(s) 1295, 1331
NmuCI GTSAC 2 cut(s) 1038, 1228
NsiI ATGCAT 1 cut(s) 565
NspI RCATGY 4 cut(s) 33, 212, 851, 950
PaeI GCATGC 2 cut(s) 851, 950
PciI ACATGT 1 cut(s) 208
PcsI WCGNNNNNNNCGW 2 cut(s) 1155, 1170
PdmI GAANNNNTTC 2 cut(s) 1056, 1091
PfeI GAWTC 3 cut(s) 163, 294, 1259
Pfl23II CGTACG 1 cut(s) 1165
PkrI GCNGC 1 cut(s) 1004
PleI GAGTC 1 cut(s) 191
PpsI GAGTC 1 cut(s) 191
PscI ACATGT 1 cut(s) 208
PspLI CGTACG 1 cut(s) 1165
PspN4I GGNNCC 2 cut(s) 1295, 1331
PsuI RGATCY 1 cut(s) 1329
RsaI GTAC 8 cut(s) 240, 524, 711, 722, 776, 1082, 1167, 1196
RsaNI GTAC 8 cut(s) 239, 523, 710, 721, 775, 1081, 1166, 1195
RseI CAYNNNNRTG 1 cut(s) 939
SaqAI TTAA 7 cut(s) 24, 363, 411, 608, 659, 735, 831
SatI GCNGC 1 cut(s) 1003
Sau3AI GATC 8 cut(s) 45, 310, 370, 472, 874, 921, 1170, 1329
ScaI AGTACT 1 cut(s) 240
SchI GAGTC 1 cut(s) 191
ScrFI CCNGG 1 cut(s) 223
SfaNI GCATC 4 cut(s) 52, 94, 310, 550
SfcI CTRYAG 2 cut(s) 689, 1132
SmiMI CAYNNNNRTG 1 cut(s) 939
SmlI CTYRAG 3 cut(s) 216, 410, 518
SmoI CTYRAG 3 cut(s) 216, 410, 518
SphI GCATGC 2 cut(s) 851, 950
SsiI CCGC 1 cut(s) 851
SspI AATATT 1 cut(s) 917
SspMI CTAG 2 cut(s) 167, 1299
StyD4I CCNGG 1 cut(s) 221
StyI CCWWGG 2 cut(s) 289, 1298
TaaI ACNGT 3 cut(s) 576, 714, 823
TaiI ACGT 3 cut(s) 962, 991, 1167
TaqI TCGA 6 cut(s) 297, 558, 756, 771, 1158, 1173
TatI WGTACW 2 cut(s) 238, 720
TfiI GAWTC 3 cut(s) 163, 294, 1259
Tru1I TTAA 7 cut(s) 24, 363, 411, 608, 659, 735, 831
Tru9I TTAA 7 cut(s) 24, 363, 411, 608, 659, 735, 831
TscAI CASTG 4 cut(s) 55, 340, 450, 1023
TseFI GTSAC 2 cut(s) 1038, 1228
TseI GCWGC 1 cut(s) 1002
Tsp45I GTSAC 2 cut(s) 1038, 1228
TspDTI ATGAA 8 cut(s) 75, 219, 257, 421, 570, 660, 1100, 1226
TspGWI ACGGA 2 cut(s) 239, 1183
TspRI CASTG 4 cut(s) 55, 340, 450, 1023
Vha464I CTTAAG 1 cut(s) 410
XapI RAATTY 5 cut(s) 272, 391, 698, 727, 833
XbaI TCTAGA 1 cut(s) 166
XceI RCATGY 4 cut(s) 33, 212, 851, 950
XmaJI CCTAGG 1 cut(s) 1298
XmiI GTMKAC 1 cut(s) 880
XmnI GAANNNNTTC 2 cut(s) 1056, 1091
XspI CTAG 2 cut(s) 167, 1299
ZrmI AGTACT 1 cut(s) 240
Zsp2I ATGCAT 1 cut(s) 565
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.