Rh5DG215000

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0000079
Physical Location & Seq
Reverse (-)
24324094 .. 24331202
7109 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG215000.1

Sequence Viewer

Length: 2064 bp
ATGTTCCAATACTTCGATCAACCTCAGTTCCTCTCTCGGTCCTCAGCTCAACAGCTCCTTAGTTCATCCCCAATTCTAGACCTAGCTTTCGAAGTCAAAATTGTTCTTCCTCAATTCAAAAATGCAAAAATCAAATCACCCCATTTCACCTGTCGCTCCGTGCTTCGAAATCATAAATCCCAAGTCCCAAATCGAAATCCTCTTTCCCCACTTCGAAACAACAAGGCCTCCCTTGGGCTCTCTGTTTCTGTTAGCTGCCGCTCTTCCTCTGGTGGTGAAGCTTTCGGTGCAAGAACCCAACACTGCTCTCATCTGTCACTTCATCTTCATATGGCTTCGAATTCGATTTCTTCGAATTCAAAGGATTTTGCAGACATTCTTAATGTTAAATTTCGGTCACTTTCACCTCCATTTATGAGGGATCCCAACAAGGTACTTCGACATAATCTGCAGCCCTTTAATAATTTGAAATACTTGCAGCTGTTTCTTCATGGCTGCTGCTCTTGGAAAATACTGACAATGTTGCTCAAGATGTCGCCCAATCTGGAACAGCTTTTCTTGCAAAATAACTTGTGGTGTCATTTTGAAGATGGTTTATGTTATGGTCGGGTTAGCTGTTTTGTACACCATGTATGCTTCAGCAATTGTGAGGGAAGGAACCAGAATGATTTCGGTTCGTCATTGCTCTGGTCAGCTGTCACTGTTTGCCAGTTGGAAGGGAAAATATTGAAACAGATATCAGTCAGTTTCTCATCTGTCATCTTCGATTCTGTTCCTGAGCTTCTCAGCAACCAAACAGTTGGATCATTACCCCAACAGCGAGGGGAGACCAAAAGCAGAAACCGACCCATTTCCCTTCTTCTTCCTCTGGTTCTCAGCCCCGCATATCAGAAACATATGACTATGCAAATGGGTTCGAAGTCCAACTCGAAGCCCGGTCAAGATAGGATCAGTGGCTTACCCGATGAGATTCTTTGCCACATTCTTTCCTTCACTTCCACAGTTGATGCTGTGAAGGCCAGCGTTTTGTCTCGTAGATGGGAGAATATGTGGCTGCGTGTTCCCACTTTGTACTTAAGTGATGATGACTTTCGCAGTGATGAAAGAGAATTCGACCCAGAGCGTTTTGTGGCCTTTGTGGACCGTGCACTTTTCCTCCGTGGCTCCTCAAGCATTCATAGAATCTCTATTAGATGTAGTGATACGGAGAATTATCCTCATCTTGATGAGTGGATTTGCACTGCAATTAGGGGTAATGTTGTCGAACTTGAACTTGATCTTCATGAGTCTGATTTTCAATATGAGCCTCTTGAGTTGCCTAGAAGCCTTTTCATGTCCAGGAGTTTGGTGGTTTTGAAGCTGACGCTGGAAGAGAATTATGTTGCAATTCCTCCCAGCTCAGATTGTTTTCCATGTCTCAAGCTTCTTGATGTTTCAGTCTTTTATCCTGATCCTGCCACAATGGAGAGTCTCTTTACTTGTGGTCCTGTACTTGAACACTTGATCATAGAGGGATATCTTGGTGAGGACCAATATTTGAATTTCAACATCTTTGCACCTAAACTAAAAAGACTGGAACTGAGATTTGATCCATGTGATGAAGTTGATTCTGTGTCCAACATTTTGTTTAATGTCAACGCTCCTAAGCTTGAAAGGTTAGATCTGAATGAGAACTTTTTGGCGAGCTATTGTCTGAGTGAAAATGCCCTAAGTGAAGCCAACATTAGTTTCAGTGACCTGCATTCGGACATTCAATTCATCACTGGTTCTGTTGACCATATACAAAGGCTTTTTGAAGGGATTGTCAATGTCAAACATCTGTCACTTCAAGCTCCATTTTTAGGGGATCCGGACACTGAAAGTCGTTGTAATCTGCCTAAACTAAATAATTTGAAGCATTTGGAGCTACAACTGGAAAACTGCTGCTCTTGGCAATTACTGACCAGATTGCTCACTATATCGCCAAATCTGGAATATCTTGTACTGGAAATTGTAAGTATTCGTCCATCTACCCTTAAGCTAATTCTACCATATGCAAGTCTCAGAGATTTTAATTTAATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

687

Amino Acids

78.09

Weight (kDa)

6.25

Isoelectric Point (pI)

51.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 317 - 354 1.3e-07 F-box domain
LRR_At5g56370 PF24758 408 - 561 1.7e-11 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1746
AccBSI CCGCTC 1 cut(s) 261
AccIII TCCGGA 1 cut(s) 1849
AciI CCGC 2 cut(s) 259, 882
AclWI GGATC 8 cut(s) 416, 429, 811, 956, 1445, 1583, 1841, 1854
AcsI RAATTY 5 cut(s) 340, 355, 389, 1109, 1540
AcuI CTGAAG 1 cut(s) 622
AfaI GTAC 5 cut(s) 435, 624, 1073, 1491, 1983
AfiI CCNNNNNNNGG 3 cut(s) 234, 1744, 1841
AflII CTTAAG 2 cut(s) 1075, 2015
AjnI CCWGG 1 cut(s) 1337
AjuI GAANNNNNNNTTGG 2 cut(s) 1712, 1744
Alw21I GWGCWC 1 cut(s) 1150
Alw26I GTCTC 5 cut(s) 821, 1035, 1421, 1475, 2045
Alw44I GTGCAC 1 cut(s) 1146
AlwI GGATC 8 cut(s) 416, 429, 811, 956, 1445, 1583, 1841, 1854
Aor13HI TCCGGA 1 cut(s) 1849
AoxI GGCC 3 cut(s) 225, 1017, 1131
ApaLI GTGCAC 1 cut(s) 1146
ApeKI GCWGC 7 cut(s) 255, 451, 478, 495, 498, 1054, 1923
ApoI RAATTY 5 cut(s) 340, 355, 389, 1109, 1540
ArsI GACNNNNNNTTYG 2 cut(s) 71, 103
Asp700I GAANNNNTTC 1 cut(s) 668
AspS9I GGNCC 4 cut(s) 39, 1141, 1484, 1528
AsuC2I CCSGG 1 cut(s) 936
AsuHPI GGTGA 5 cut(s) 129, 139, 287, 396, 1535
AsuII TTCGAA 6 cut(s) 90, 166, 214, 338, 353, 917
AvaII GGWCC 4 cut(s) 39, 1141, 1484, 1528
BaeGI GKGCMC 1 cut(s) 1150
BamHI GGATCC 2 cut(s) 421, 1846
BanII GRGCYC 1 cut(s) 240
Bbv12I GWGCWC 1 cut(s) 1150
BbvCI CCTCAGC 1 cut(s) 43
BbvI GCAGC 7 cut(s) 242, 463, 482, 485, 490, 1041, 1910
BccI CCATC 3 cut(s) 584, 1032, 2014
BciT130I CCWGG 1 cut(s) 1339
BclI TGATCA 1 cut(s) 1503
BcnI CCSGG 1 cut(s) 936
BcoDI GTCTC 5 cut(s) 821, 1035, 1421, 1475, 2045
BfaI CTAG 3 cut(s) 77, 83, 1320
BfmI CTRYAG 1 cut(s) 449
BfrI CTTAAG 2 cut(s) 1075, 2015
BfuAI ACCTGC 1 cut(s) 1746
BglII AGATCT 1 cut(s) 1660
BisI GCNGC 8 cut(s) 256, 259, 452, 479, 496, 499, 1055, 1924
BlsI GCNGC 8 cut(s) 257, 260, 453, 480, 497, 500, 1056, 1925
Bme1390I CCNGG 2 cut(s) 936, 1339
Bme18I GGWCC 4 cut(s) 39, 1141, 1484, 1528
BmgT120I GGNCC 4 cut(s) 39, 1141, 1484, 1528
BmiI GGNNCC 4 cut(s) 423, 659, 1165, 1848
BmrFI CCNGG 2 cut(s) 936, 1339
BmsI GCATC 1 cut(s) 997
Bpu10I CCTNAGC 3 cut(s) 43, 777, 1644
Bpu14I TTCGAA 6 cut(s) 90, 166, 214, 338, 353, 917
BpuEI CTTGAG 4 cut(s) 512, 1153, 1331, 1403
BpuMI CCSGG 1 cut(s) 936
BsaI GGTCTC 1 cut(s) 821
BsaJI CCNNGG 2 cut(s) 232, 1159
BsaWI WCCGGW 1 cut(s) 1849
BsaXI ACNNNNNCTCC 6 cut(s) 212, 242, 1034, 1064, 1140, 1170
Bsc4I CCNNNNNNNGG 3 cut(s) 234, 1744, 1841
Bse1I ACTGG 5 cut(s) 709, 1578, 1768, 1917, 1989
Bse3DI GCAATG 1 cut(s) 680
BseAI TCCGGA 1 cut(s) 1849
BseBI CCWGG 1 cut(s) 1339
BseDI CCNNGG 2 cut(s) 232, 1159
BseGI GGATG 1 cut(s) 65
BseLI CCNNNNNNNGG 3 cut(s) 234, 1744, 1841
BseMI GCAATG 1 cut(s) 680
BseMII CTCAG 9 cut(s) 38, 57, 768, 799, 889, 1413, 1571, 1685, 2056
BseNI ACTGG 5 cut(s) 709, 1578, 1768, 1917, 1989
BseRI GAGGAG 1 cut(s) 1156
BseSI GKGCMC 1 cut(s) 1150
BseXI GCAGC 7 cut(s) 242, 463, 482, 485, 490, 1041, 1910
BseYI CCCAGC 1 cut(s) 1394
BshFI GGCC 3 cut(s) 227, 1019, 1133
BsiHKAI GWGCWC 1 cut(s) 1150
BsiSI CCGG 2 cut(s) 936, 1850
BslFI GGGAC 1 cut(s) 170
BslI CCNNNNNNNGG 3 cut(s) 234, 1744, 1841
BsmAI GTCTC 5 cut(s) 821, 1035, 1421, 1475, 2045
BsmFI GGGAC 1 cut(s) 170
BsmI GAATGC 2 cut(s) 1173, 1741
BsnI GGCC 3 cut(s) 227, 1019, 1133
Bso31I GGTCTC 1 cut(s) 821
Bsp119I TTCGAA 6 cut(s) 90, 166, 214, 338, 353, 917
Bsp1286I GDGCHC 2 cut(s) 240, 1150
Bsp13I TCCGGA 1 cut(s) 1849
Bsp1407I TGTACA 1 cut(s) 622
BspACI CCGC 2 cut(s) 259, 882
BspANI GGCC 3 cut(s) 227, 1019, 1133
BspCNI CTCAG 9 cut(s) 37, 56, 769, 798, 888, 1412, 1572, 1686, 2055
BspEI TCCGGA 1 cut(s) 1849
BspHI TCATGA 1 cut(s) 1282
BspLI GGNNCC 4 cut(s) 423, 659, 1165, 1848
BspMAI CTGCAG 1 cut(s) 453
BspMI ACCTGC 1 cut(s) 1746
BspPI GGATC 8 cut(s) 416, 429, 811, 956, 1445, 1583, 1841, 1854
BspQI GCTCTTC 1 cut(s) 268
BspT104I TTCGAA 6 cut(s) 90, 166, 214, 338, 353, 917
BspTI CTTAAG 2 cut(s) 1075, 2015
BspTNI GGTCTC 1 cut(s) 821
BsrBI CCGCTC 1 cut(s) 261
BsrDI GCAATG 1 cut(s) 680
BsrGI TGTACA 1 cut(s) 622
BsrI ACTGG 5 cut(s) 709, 1578, 1768, 1917, 1989
BssECI CCNNGG 2 cut(s) 232, 1159
BssT1I CCWWGG 1 cut(s) 232
Bst2UI CCWGG 1 cut(s) 1339
Bst4CI ACNGT 4 cut(s) 703, 799, 1003, 1145
Bst6I CTCTTC 2 cut(s) 268, 1365
BstAFI CTTAAG 2 cut(s) 1075, 2015
BstAUI TGTACA 1 cut(s) 622
BstBI TTCGAA 6 cut(s) 90, 166, 214, 338, 353, 917
BstC8I GCNNGC 2 cut(s) 1021, 1684
BstDSI CCRYGG 1 cut(s) 1159
BstF5I GGATG 1 cut(s) 65
BstMAI GTCTC 5 cut(s) 821, 1035, 1421, 1475, 2045
BstMWI GCNNNNNNNGC 5 cut(s) 287, 559, 1016, 1170, 1903
BstNI CCWGG 1 cut(s) 1339
BstSCI CCNGG 2 cut(s) 934, 1337
BstSFI CTRYAG 1 cut(s) 449
BstSLI GKGCMC 1 cut(s) 1150
BstV1I GCAGC 7 cut(s) 242, 463, 482, 485, 490, 1041, 1910
BstX2I RGATCY 3 cut(s) 421, 1660, 1846
BstXI CCANNNNNNTGG 2 cut(s) 800, 1345
BstYI RGATCY 3 cut(s) 421, 1660, 1846
BsuRI GGCC 3 cut(s) 227, 1019, 1133
BtgI CCRYGG 1 cut(s) 1159
BtsCI GGATG 1 cut(s) 65
BtsI GCAGTG 3 cut(s) 301, 1102, 1239
BtsIMutI CAGTG 8 cut(s) 301, 699, 958, 1102, 1239, 1738, 1761, 1854
BveI ACCTGC 1 cut(s) 1746
Cac8I GCNNGC 2 cut(s) 1021, 1684
CciI TCATGA 1 cut(s) 1282
Cfr13I GGNCC 4 cut(s) 39, 1141, 1484, 1528
CseI GACGC 1 cut(s) 1372
Csp6I GTAC 5 cut(s) 434, 623, 1072, 1490, 1982
CviAII CATG 6 cut(s) 491, 629, 1283, 1333, 1413, 1593
CviQI GTAC 5 cut(s) 434, 623, 1072, 1490, 1982
Eam1104I CTCTTC 2 cut(s) 268, 1365
EarI CTCTTC 2 cut(s) 268, 1365
Eco130I CCWWGG 1 cut(s) 232
Eco147I AGGCCT 1 cut(s) 227
Eco24I GRGCYC 1 cut(s) 240
Eco31I GGTCTC 1 cut(s) 821
Eco32I GATATC 2 cut(s) 738, 1517
Eco47I GGWCC 4 cut(s) 39, 1141, 1484, 1528
Eco57I CTGAAG 1 cut(s) 622
EcoRI GAATTC 3 cut(s) 340, 355, 1109
EcoRII CCWGG 1 cut(s) 1337
EcoRV GATATC 2 cut(s) 738, 1517
EcoT14I CCWWGG 1 cut(s) 232
EcoT38I GRGCYC 1 cut(s) 240
ErhI CCWWGG 1 cut(s) 232
FaeI CATG 6 cut(s) 494, 632, 1286, 1336, 1416, 1596
FaqI GGGAC 1 cut(s) 170
FatI CATG 6 cut(s) 490, 628, 1282, 1332, 1412, 1592
FauI CCCGC 1 cut(s) 889
FauNDI CATATG 3 cut(s) 330, 897, 2032
FbaI TGATCA 1 cut(s) 1503
Fnu4HI GCNGC 8 cut(s) 256, 259, 452, 479, 496, 499, 1055, 1924
FokI GGATG 1 cut(s) 52
FriOI GRGCYC 1 cut(s) 240
Fsp4HI GCNGC 8 cut(s) 256, 259, 452, 479, 496, 499, 1055, 1924
FspBI CTAG 3 cut(s) 77, 83, 1320
GluI GCNGC 8 cut(s) 256, 259, 452, 479, 496, 499, 1055, 1924
GsaI CCCAGC 1 cut(s) 1398
HaeIII GGCC 3 cut(s) 227, 1019, 1133
HapII CCGG 2 cut(s) 936, 1850
HgaI GACGC 1 cut(s) 1372
Hin1II CATG 6 cut(s) 494, 632, 1286, 1336, 1416, 1596
HincII GTYRAC 2 cut(s) 1636, 1774
HindII GTYRAC 2 cut(s) 1636, 1774
HindIII AAGCTT 3 cut(s) 279, 1421, 1646
HinfI GANTC 6 cut(s) 767, 970, 1182, 1286, 1468, 1607
HpaII CCGG 2 cut(s) 936, 1850
HphI GGTGA 5 cut(s) 129, 139, 287, 396, 1535
Hpy166II GTNNAC 5 cut(s) 625, 1141, 1148, 1636, 1774
Hpy188I TCNGA 7 cut(s) 891, 1291, 1402, 1665, 1695, 1747, 2045
Hpy8I GTNNAC 5 cut(s) 625, 1141, 1148, 1636, 1774
HpyAV CCTTC 6 cut(s) 648, 710, 866, 1000, 1009, 1790
HpyCH4III ACNGT 4 cut(s) 703, 799, 1003, 1145
HpyF10VI GCNNNNNNNGC 5 cut(s) 287, 559, 1016, 1170, 1903
Hsp92II CATG 6 cut(s) 494, 632, 1286, 1336, 1416, 1596
Kpn2I TCCGGA 1 cut(s) 1849
Ksp22I TGATCA 1 cut(s) 1503
LguI GCTCTTC 1 cut(s) 268
LmnI GCTCC 6 cut(s) 60, 161, 1169, 1645, 1837, 1903
Lsp1109I GCAGC 7 cut(s) 242, 463, 482, 485, 490, 1041, 1910
LweI GCATC 1 cut(s) 997
MaeI CTAG 3 cut(s) 77, 83, 1320
MaeIII GTNAC 5 cut(s) 315, 396, 697, 1733, 1821
MbiI CCGCTC 1 cut(s) 261
MfeI CAATTG 1 cut(s) 643
MflI RGATCY 3 cut(s) 421, 1660, 1846
MhlI GDGCHC 2 cut(s) 240, 1150
MlyI GAGTC 2 cut(s) 1295, 1477
MmeI TCCRAC 4 cut(s) 693, 781, 948, 1641
MroI TCCGGA 1 cut(s) 1849
MroXI GAANNNNTTC 1 cut(s) 668
MseI TTAA 8 cut(s) 381, 387, 459, 1076, 1629, 2016, 2052, 2057
MslI CAYNNNNRTG 1 cut(s) 1224
MspA1I CMGCKG 2 cut(s) 481, 695
MspCI CTTAAG 2 cut(s) 1075, 2015
MspI CCGG 2 cut(s) 936, 1850
MspR9I CCNGG 2 cut(s) 936, 1339
MunI CAATTG 1 cut(s) 643
Mva1269I GAATGC 2 cut(s) 1173, 1741
MvaI CCWGG 1 cut(s) 1339
MwoI GCNNNNNNNGC 5 cut(s) 287, 559, 1016, 1170, 1903
NciI CCSGG 1 cut(s) 936
NdeI CATATG 3 cut(s) 330, 897, 2032
NlaIII CATG 6 cut(s) 494, 632, 1286, 1336, 1416, 1596
NlaIV GGNNCC 4 cut(s) 423, 659, 1165, 1848
NmuCI GTSAC 5 cut(s) 315, 396, 697, 1733, 1821
NspV TTCGAA 6 cut(s) 90, 166, 214, 338, 353, 917
PagI TCATGA 1 cut(s) 1282
PceI AGGCCT 1 cut(s) 227
PciSI GCTCTTC 1 cut(s) 268
PcsI WCGNNNNNNNCGW 1 cut(s) 350
PctI GAATGC 2 cut(s) 1173, 1741
PdmI GAANNNNTTC 1 cut(s) 668
PfeI GAWTC 4 cut(s) 767, 970, 1182, 1607
PfoI TCCNGGA 1 cut(s) 1337
PkrI GCNGC 8 cut(s) 257, 260, 453, 480, 497, 500, 1056, 1925
PleI GAGTC 2 cut(s) 1294, 1476
PpsI GAGTC 2 cut(s) 1294, 1476
Psp6I CCWGG 1 cut(s) 1337
PspFI CCCAGC 1 cut(s) 1394
PspGI CCWGG 1 cut(s) 1337
PspN4I GGNNCC 4 cut(s) 423, 659, 1165, 1848
PspPI GGNCC 4 cut(s) 39, 1141, 1484, 1528
PstI CTGCAG 1 cut(s) 453
PsuI RGATCY 3 cut(s) 421, 1660, 1846
PvuII CAGCTG 2 cut(s) 481, 695
RsaI GTAC 5 cut(s) 435, 624, 1073, 1491, 1983
RsaNI GTAC 5 cut(s) 434, 623, 1072, 1490, 1982
RseI CAYNNNNRTG 1 cut(s) 1224
SapI GCTCTTC 1 cut(s) 268
SaqAI TTAA 8 cut(s) 381, 387, 459, 1076, 1629, 2016, 2052, 2057
SatI GCNGC 8 cut(s) 256, 259, 452, 479, 496, 499, 1055, 1924
Sau96I GGNCC 4 cut(s) 39, 1141, 1484, 1528
SchI GAGTC 2 cut(s) 1295, 1477
ScrFI CCNGG 2 cut(s) 936, 1339
SduI GDGCHC 2 cut(s) 240, 1150
SfaNI GCATC 1 cut(s) 997
SfcI CTRYAG 1 cut(s) 449
SfuI TTCGAA 6 cut(s) 90, 166, 214, 338, 353, 917
SinI GGWCC 4 cut(s) 39, 1141, 1484, 1528
SmiMI CAYNNNNRTG 1 cut(s) 1224
SmlI CTYRAG 6 cut(s) 527, 1075, 1168, 1310, 1418, 2015
SmoI CTYRAG 6 cut(s) 527, 1075, 1168, 1310, 1418, 2015
SseBI AGGCCT 1 cut(s) 227
SsiI CCGC 2 cut(s) 259, 882
SspI AATATT 2 cut(s) 726, 1535
SspMI CTAG 3 cut(s) 77, 83, 1320
StuI AGGCCT 1 cut(s) 227
StyD4I CCNGG 2 cut(s) 934, 1337
StyI CCWWGG 1 cut(s) 232
TaaI ACNGT 4 cut(s) 703, 799, 1003, 1145
TaqII GACCGA 2 cut(s) 27, 384
TatI WGTACW 4 cut(s) 622, 1071, 1489, 1981
TauI GCSGC 1 cut(s) 261
TfiI GAWTC 4 cut(s) 767, 970, 1182, 1607
Tru1I TTAA 8 cut(s) 381, 387, 459, 1076, 1629, 2016, 2052, 2057
Tru9I TTAA 8 cut(s) 381, 387, 459, 1076, 1629, 2016, 2052, 2057
TscAI CASTG 8 cut(s) 308, 706, 958, 1102, 1246, 1738, 1768, 1861
TseFI GTSAC 5 cut(s) 315, 396, 697, 1733, 1821
TseI GCWGC 7 cut(s) 255, 451, 478, 495, 498, 1054, 1923
Tsp45I GTSAC 5 cut(s) 315, 396, 697, 1733, 1821
TspGWI ACGGA 3 cut(s) 148, 1148, 1220
TspRI CASTG 8 cut(s) 308, 706, 958, 1102, 1246, 1738, 1768, 1861
Vha464I CTTAAG 2 cut(s) 1075, 2015
VneI GTGCAC 1 cut(s) 1146
VpaK11BI GGWCC 4 cut(s) 39, 1141, 1484, 1528
XapI RAATTY 5 cut(s) 340, 355, 389, 1109, 1540
XbaI TCTAGA 1 cut(s) 76
XcmI CCANNNNNNNNNTGG 1 cut(s) 1345
XmnI GAANNNNTTC 1 cut(s) 668
XspI CTAG 3 cut(s) 77, 83, 1320
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.