MD11G1265300.v1.1

domain in FBox and BRCT domain containing plant proteins

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0000079
Physical Location & Seq
Forward (+)
38057603 .. 38059821
2219 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1265300.v1.1.491

Sequence Viewer

Length: 1389 bp
ATGGGTTCGAACTCAATGCCTTGTCAAACGTGCAGTGAAGATAGGATCAGTAGATTACCAGATGGCATTCTTTGTCACATTCTTTCCTTCCTTGATATAACCGAGACTATAAAGACCAGCGGTTTATCACACAGATGGAAGGATGTGTGGGTTTCTTTTCCCAATCTTAAGTTCAATGTACAAAACCCGGAATCTGACAAAGGCCGTAGTGCAGGATTTGTGGATCAAGTACTTTCCCATAGTGGATCGTCAAGCATTCAGCGGTTCGAACTTGTATGTTACGGGGTGGATGATTATTTTTCTCGTGTTCATGATTGGGTTTGCACTGCTCTTAGGCGTAATGTTGTTGAGCTCCTTCTTTATTTGCTTCCAAATCCAGGGAAGCTTTATGAGTTTCCTCAAAGCCTTTTCATGTGCAAGACTTTGTCGGTTTTGAAGCTGAGGCTGCAATTCGATCTTATTGCTATTCCCTCAAACTCTGATTGTTTTCCACATCTCAAAATCCTCCATGTTACAGTCTGTTGCCCGAATGCTGACTCAATAAAGAAACTTTTTTCATGTTGTCCAGCACTTGAAGATTTGGTTATAGATGGACTTATTTCGAAAATCGCCAGAGAAGAACGTCTCCTCTTGAGCTTCACTGTCTCTGCACCTAAACTCAGAAGACTACGAATATGTTTGCGGGGTGGTGCTAAGAACTACGTTTCTATTAATATTAATGCTCCACATCTTGAAAAGTTGGATCTCTTTGACAATTTTTTGGTGGACTATGAATTGAAGAATGAAAAATCCCTAAGCACAGCCAAGATTGCTGTCCAAATTCATAAGAGATGTCAGAATGATCACCTCGACAATGATTATGCTGCTCGCATGCATAGGCTTTTCGCAGGAATTATCAATGTTAAGTATCTCTCTCTTTCAGCTCCAATTTTGAGAGATTCTGATCCTAAATTTCAACATCTTTTGCCTACATTTTATAATTTGAACCACTTGGAAGTACTTCTTAAAACGTGCTGCTCCTGGAAATCATTGATAAAGTTGCTCGAGATCTCACCCAATCTGGAGAATCTTGTCTTTGAAAATAACGTCGAATGTTATACTGCTGATGACAACAATGAGCTCCATGAATGGTGTCCACCGAACATTGTGCCTATTTGTTTGTTGTCAAGCCTGAAGTCTATTTCCGTACGAGGATACAAATGGCGGCCAGATGAGATGGAAGTGGCAAAGTACATGCTGGAGCATGGTGTAGTTTTGAAGAAAGTGACAGTTTATACTAGAAGTATCCCTACGGAAAAACAAATGGAGTTGGAGCAGGAGTTTTCAAAGTTCCCAAGGGCATCAAAAACTTGCCAAACTGAACTTGTGGAACTCAAAGCAAAAGGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

463

Amino Acids

52.8

Weight (kDa)

8.01

Isoelectric Point (pI)

40.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 16 - 56 4e-07 F-box domain
LRR_At1g61320_AtMIF1 PF23622 85 - 429 7.9e-14 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 104 - 257 2e-14 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 380 - 423 1.7e-14 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 978
AciI CCGC 4 cut(s) 120, 262, 682, 1204
AclWI GGATC 5 cut(s) 53, 231, 253, 750, 938
AcoI YGGCCR 1 cut(s) 1205
AcsI RAATTY 2 cut(s) 819, 950
AcuI CTGAAG 1 cut(s) 1193
AfaI GTAC 5 cut(s) 180, 231, 999, 1188, 1232
AfiI CCNNNNNNNGG 1 cut(s) 377
AflII CTTAAG 1 cut(s) 167
AjnI CCWGG 2 cut(s) 376, 1019
AjuI GAANNNNNNNTTGG 2 cut(s) 155, 187
AluBI AGCT 6 cut(s) 352, 385, 439, 636, 923, 1120
AluI AGCT 6 cut(s) 352, 385, 439, 636, 923, 1120
Alw21I GWGCWC 2 cut(s) 354, 1122
Alw26I GTCTC 3 cut(s) 98, 629, 649
AlwI GGATC 5 cut(s) 53, 231, 253, 750, 938
Ama87I CYCGRG 1 cut(s) 1043
AoxI GGCC 2 cut(s) 202, 1205
ApeKI GCWGC 3 cut(s) 445, 863, 1014
ApoI RAATTY 2 cut(s) 819, 950
AseI ATTAAT 2 cut(s) 711, 717
Asp700I GAANNNNTTC 1 cut(s) 999
AsuC2I CCSGG 1 cut(s) 188
AsuHPI GGTGA 2 cut(s) 836, 1044
AsuII TTCGAA 3 cut(s) 8, 267, 602
AvaI CYCGRG 1 cut(s) 1043
BanII GRGCYC 2 cut(s) 354, 1122
BarI GAAGNNNNNNTAC 2 cut(s) 1273, 1305
BauI CACGAG 1 cut(s) 303
BbsI GAAGAC 1 cut(s) 670
Bbv12I GWGCWC 2 cut(s) 354, 1122
BbvCI CCTCAGC 1 cut(s) 440
BbvI GCAGC 3 cut(s) 432, 850, 1001
BccI CCATC 4 cut(s) 56, 129, 584, 1210
BceAI ACGGC 1 cut(s) 189
BcgI CGANNNNNNTGC 5 cut(s) 32, 443, 477, 1129, 1163
BciT130I CCWGG 2 cut(s) 378, 1021
BciVI GTATCC 2 cut(s) 1187, 1295
BclI TGATCA 1 cut(s) 841
BcnI CCSGG 1 cut(s) 188
BcoDI GTCTC 3 cut(s) 98, 629, 649
BfaI CTAG 1 cut(s) 1278
BfrI CTTAAG 1 cut(s) 167
BfuI GTATCC 2 cut(s) 1187, 1295
BglII AGATCT 1 cut(s) 1047
BisI GCNGC 4 cut(s) 446, 864, 1015, 1205
BlsI GCNGC 4 cut(s) 447, 865, 1016, 1206
BmcAI AGTACT 2 cut(s) 231, 999
Bme1390I CCNGG 3 cut(s) 188, 378, 1021
BmeT110I CYCGRG 1 cut(s) 1043
BmrFI CCNGG 3 cut(s) 188, 378, 1021
BmsI GCATC 1 cut(s) 1349
BpiI GAAGAC 1 cut(s) 670
BpmI CTGGAG 2 cut(s) 1082, 1259
Bpu10I CCTNAGC 2 cut(s) 440, 794
Bpu14I TTCGAA 3 cut(s) 8, 267, 602
BpuEI CTTGAG 1 cut(s) 652
BpuMI CCSGG 1 cut(s) 188
BsaBI GATNNNNATC 1 cut(s) 942
BsaJI CCNNGG 2 cut(s) 377, 1334
BsaXI ACNNNNNCTCC 2 cut(s) 1304, 1334
Bsc4I CCNNNNNNNGG 1 cut(s) 377
Bse8I GATNNNNATC 1 cut(s) 942
BseBI CCWGG 2 cut(s) 378, 1021
BseDI CCNNGG 2 cut(s) 377, 1334
BseGI GGATG 2 cut(s) 148, 295
BseJI GATNNNNATC 1 cut(s) 942
BseLI CCNNNNNNNGG 1 cut(s) 377
BseMII CTCAG 2 cut(s) 431, 673
BseRI GAGGAG 1 cut(s) 617
BseXI GCAGC 3 cut(s) 432, 850, 1001
BsgI GTGCAG 3 cut(s) 52, 231, 633
BshFI GGCC 2 cut(s) 204, 1207
BsiHKAI GWGCWC 2 cut(s) 354, 1122
BsiHKCI CYCGRG 1 cut(s) 1043
BsiSI CCGG 1 cut(s) 188
BsiWI CGTACG 1 cut(s) 1186
BslI CCNNNNNNNGG 1 cut(s) 377
BsmAI GTCTC 3 cut(s) 98, 629, 649
BsmBI CGTCTC 1 cut(s) 629
BsmI GAATGC 3 cut(s) 66, 255, 535
BsnI GGCC 2 cut(s) 204, 1207
BsoBI CYCGRG 1 cut(s) 1043
Bsp119I TTCGAA 3 cut(s) 8, 267, 602
Bsp1286I GDGCHC 2 cut(s) 354, 1122
Bsp1407I TGTACA 1 cut(s) 178
Bsp143I GATC 8 cut(s) 45, 223, 245, 454, 742, 841, 943, 1047
BspACI CCGC 4 cut(s) 120, 262, 682, 1204
BspANI GGCC 2 cut(s) 204, 1207
BspCNI CTCAG 2 cut(s) 432, 672
BspHI TCATGA 1 cut(s) 310
BspPI GGATC 5 cut(s) 53, 231, 253, 750, 938
BspT104I TTCGAA 3 cut(s) 8, 267, 602
BspTI CTTAAG 1 cut(s) 167
BsrGI TGTACA 1 cut(s) 178
BssECI CCNNGG 2 cut(s) 377, 1334
BssMI GATC 8 cut(s) 45, 223, 245, 454, 742, 841, 943, 1047
BssSI CACGAG 1 cut(s) 303
BssT1I CCWWGG 1 cut(s) 1334
Bst2BI CACGAG 1 cut(s) 303
Bst2UI CCWGG 2 cut(s) 378, 1021
Bst4CI ACNGT 3 cut(s) 517, 643, 1270
BstAFI CTTAAG 1 cut(s) 167
BstAUI TGTACA 1 cut(s) 178
BstBI TTCGAA 3 cut(s) 8, 267, 602
BstC8I GCNNGC 2 cut(s) 868, 872
BstDEI CTNAG 5 cut(s) 332, 440, 659, 693, 794
BstF5I GGATG 2 cut(s) 148, 295
BstKTI GATC 8 cut(s) 48, 226, 248, 457, 745, 844, 946, 1050
BstMAI GTCTC 3 cut(s) 98, 629, 649
BstMBI GATC 8 cut(s) 45, 223, 245, 454, 742, 841, 943, 1047
BstMWI GCNNNNNNNGC 2 cut(s) 445, 809
BstNI CCWGG 2 cut(s) 378, 1021
BstNSI RCATGY 2 cut(s) 874, 1237
BstSCI CCNGG 3 cut(s) 186, 376, 1019
BstV1I GCAGC 3 cut(s) 432, 850, 1001
BstV2I GAAGAC 1 cut(s) 670
BstX2I RGATCY 2 cut(s) 742, 1047
BstYI RGATCY 2 cut(s) 742, 1047
BsuI GTATCC 2 cut(s) 1187, 1295
BsuRI GGCC 2 cut(s) 204, 1207
BtsCI GGATG 2 cut(s) 148, 295
BtsI GCAGTG 2 cut(s) 40, 324
BtsIMutI CAGTG 3 cut(s) 40, 324, 639
Cac8I GCNNGC 2 cut(s) 868, 872
CciI TCATGA 1 cut(s) 310
Csp6I GTAC 5 cut(s) 179, 230, 998, 1187, 1231
CviAII CATG 8 cut(s) 311, 412, 509, 558, 871, 1124, 1234, 1244
CviQI GTAC 5 cut(s) 179, 230, 998, 1187, 1231
DdeI CTNAG 5 cut(s) 332, 440, 659, 693, 794
DpnI GATC 8 cut(s) 47, 225, 247, 456, 744, 843, 945, 1049
DpnII GATC 8 cut(s) 45, 223, 245, 454, 742, 841, 943, 1047
EaeI YGGCCR 1 cut(s) 1205
Ecl136II GAGCTC 2 cut(s) 352, 1120
Eco130I CCWWGG 1 cut(s) 1334
Eco24I GRGCYC 2 cut(s) 354, 1122
Eco53kI GAGCTC 2 cut(s) 352, 1120
Eco57I CTGAAG 1 cut(s) 1193
Eco88I CYCGRG 1 cut(s) 1043
EcoICRI GAGCTC 2 cut(s) 352, 1120
EcoRII CCWGG 2 cut(s) 376, 1019
EcoT14I CCWWGG 1 cut(s) 1334
EcoT22I ATGCAT 1 cut(s) 876
EcoT38I GRGCYC 2 cut(s) 354, 1122
ErhI CCWWGG 1 cut(s) 1334
Esp3I CGTCTC 1 cut(s) 629
FaeI CATG 8 cut(s) 314, 415, 512, 561, 874, 1127, 1237, 1247
FalI AAGNNNNNCTT 2 cut(s) 987, 1019
FatI CATG 8 cut(s) 310, 411, 508, 557, 870, 1123, 1233, 1243
FauI CCCGC 1 cut(s) 675
FbaI TGATCA 1 cut(s) 841
Fnu4HI GCNGC 4 cut(s) 446, 864, 1015, 1205
FokI GGATG 2 cut(s) 155, 302
FriOI GRGCYC 2 cut(s) 354, 1122
Fsp4HI GCNGC 4 cut(s) 446, 864, 1015, 1205
FspBI CTAG 1 cut(s) 1278
GluI GCNGC 4 cut(s) 446, 864, 1015, 1205
GsuI CTGGAG 2 cut(s) 1082, 1259
HaeIII GGCC 2 cut(s) 204, 1207
HapII CCGG 1 cut(s) 188
Hin1II CATG 8 cut(s) 314, 415, 512, 561, 874, 1127, 1237, 1247
HindIII AAGCTT 1 cut(s) 383
HinfI GANTC 4 cut(s) 191, 536, 938, 1066
HpaII CCGG 1 cut(s) 188
HphI GGTGA 2 cut(s) 836, 1044
Hpy166II GTNNAC 2 cut(s) 766, 1136
Hpy188I TCNGA 5 cut(s) 196, 481, 662, 837, 943
Hpy188III TCNNGA 5 cut(s) 311, 631, 731, 1045, 1061
Hpy8I GTNNAC 2 cut(s) 766, 1136
Hpy99I CGWCG 1 cut(s) 1091
HpyAV CCTTC 3 cut(s) 97, 133, 365
HpyCH4III ACNGT 3 cut(s) 517, 643, 1270
HpyCH4IV ACGT 5 cut(s) 29, 622, 702, 1010, 1086
HpyCH4V TGCA 7 cut(s) 33, 212, 324, 417, 448, 650, 874
HpyF10VI GCNNNNNNNGC 2 cut(s) 445, 809
HpyF3I CTNAG 5 cut(s) 332, 440, 659, 693, 794
HpySE526I ACGT 5 cut(s) 29, 622, 702, 1010, 1086
Hsp92II CATG 8 cut(s) 314, 415, 512, 561, 874, 1127, 1237, 1247
Ksp22I TGATCA 1 cut(s) 841
Kzo9I GATC 8 cut(s) 45, 223, 245, 454, 742, 841, 943, 1047
LmnI GCTCC 7 cut(s) 357, 727, 928, 1022, 1125, 1240, 1312
Lsp1109I GCAGC 3 cut(s) 432, 850, 1001
LweI GCATC 1 cut(s) 1349
MaeI CTAG 1 cut(s) 1278
MaeII ACGT 5 cut(s) 29, 622, 702, 1010, 1086
MaeIII GTNAC 4 cut(s) 74, 278, 511, 1264
MalI GATC 8 cut(s) 47, 225, 247, 456, 744, 843, 945, 1049
MboI GATC 8 cut(s) 45, 223, 245, 454, 742, 841, 943, 1047
MboII GAAGA 6 cut(s) 50, 587, 629, 675, 790, 1270
MflI RGATCY 2 cut(s) 742, 1047
MhlI GDGCHC 2 cut(s) 354, 1122
MluCI AATT 8 cut(s) 449, 754, 773, 819, 891, 927, 950, 979
MlyI GAGTC 1 cut(s) 530
MmeI TCCRAC 2 cut(s) 720, 1290
MnlI CCTC 7 cut(s) 408, 435, 481, 515, 638, 857, 1184
Mph1103I ATGCAT 1 cut(s) 876
MroXI GAANNNNTTC 1 cut(s) 999
MseI TTAA 5 cut(s) 168, 711, 717, 903, 1005
MslI CAYNNNNRTG 1 cut(s) 133
MspA1I CMGCKG 2 cut(s) 120, 262
MspCI CTTAAG 1 cut(s) 167
MspI CCGG 1 cut(s) 188
MspR9I CCNGG 3 cut(s) 188, 378, 1021
Mva1269I GAATGC 3 cut(s) 66, 255, 535
MvaI CCWGG 2 cut(s) 378, 1021
MwoI GCNNNNNNNGC 2 cut(s) 445, 809
NciI CCSGG 1 cut(s) 188
NdeII GATC 8 cut(s) 45, 223, 245, 454, 742, 841, 943, 1047
NlaIII CATG 8 cut(s) 314, 415, 512, 561, 874, 1127, 1237, 1247
NmuCI GTSAC 2 cut(s) 74, 1264
NsiI ATGCAT 1 cut(s) 876
NspI RCATGY 2 cut(s) 874, 1237
NspV TTCGAA 3 cut(s) 8, 267, 602
PaeI GCATGC 1 cut(s) 874
PaeR7I CTCGAG 1 cut(s) 1043
PagI TCATGA 1 cut(s) 310
PctI GAATGC 3 cut(s) 66, 255, 535
PdmI GAANNNNTTC 1 cut(s) 999
PfeI GAWTC 3 cut(s) 191, 938, 1066
Pfl23II CGTACG 1 cut(s) 1186
PflFI GACNNNGTC 1 cut(s) 424
PfoI TCCNGGA 1 cut(s) 1019
PkrI GCNGC 4 cut(s) 447, 865, 1016, 1206
PleI GAGTC 1 cut(s) 530
PpsI GAGTC 1 cut(s) 530
PshBI ATTAAT 2 cut(s) 711, 717
PsiI TTATAA 1 cut(s) 978
Psp124BI GAGCTC 2 cut(s) 354, 1122
Psp6I CCWGG 2 cut(s) 376, 1019
PspGI CCWGG 2 cut(s) 376, 1019
PspLI CGTACG 1 cut(s) 1186
PsuI RGATCY 2 cut(s) 742, 1047
PsyI GACNNNGTC 1 cut(s) 424
RsaI GTAC 5 cut(s) 180, 231, 999, 1188, 1232
RsaNI GTAC 5 cut(s) 179, 230, 998, 1187, 1231
RseI CAYNNNNRTG 1 cut(s) 133
SacI GAGCTC 2 cut(s) 354, 1122
SaqAI TTAA 5 cut(s) 168, 711, 717, 903, 1005
SatI GCNGC 4 cut(s) 446, 864, 1015, 1205
Sau3AI GATC 8 cut(s) 45, 223, 245, 454, 742, 841, 943, 1047
ScaI AGTACT 2 cut(s) 231, 999
SchI GAGTC 1 cut(s) 530
ScrFI CCNGG 3 cut(s) 188, 378, 1021
SduI GDGCHC 2 cut(s) 354, 1122
SfaNI GCATC 1 cut(s) 1349
Sfr274I CTCGAG 1 cut(s) 1043
SfuI TTCGAA 3 cut(s) 8, 267, 602
SlaI CTCGAG 1 cut(s) 1043
SmiMI CAYNNNNRTG 1 cut(s) 133
SmlI CTYRAG 3 cut(s) 167, 631, 1043
SmoI CTYRAG 3 cut(s) 167, 631, 1043
SphI GCATGC 1 cut(s) 874
Sse9I AATT 8 cut(s) 449, 754, 773, 819, 891, 927, 950, 979
SsiI CCGC 4 cut(s) 120, 262, 682, 1204
SspI AATATT 1 cut(s) 715
SspMI CTAG 1 cut(s) 1278
SstI GAGCTC 2 cut(s) 354, 1122
StyD4I CCNGG 3 cut(s) 186, 376, 1019
StyI CCWWGG 1 cut(s) 1334
TaaI ACNGT 3 cut(s) 517, 643, 1270
TaiI ACGT 5 cut(s) 32, 625, 705, 1013, 1089
TaqI TCGA 7 cut(s) 8, 267, 453, 602, 849, 1044, 1089
TasI AATT 8 cut(s) 449, 754, 773, 819, 891, 927, 950, 979
TatI WGTACW 4 cut(s) 178, 229, 997, 1230
TauI GCSGC 1 cut(s) 1207
TfiI GAWTC 3 cut(s) 191, 938, 1066
Tru1I TTAA 5 cut(s) 168, 711, 717, 903, 1005
Tru9I TTAA 5 cut(s) 168, 711, 717, 903, 1005
TscAI CASTG 3 cut(s) 40, 331, 646
TseFI GTSAC 2 cut(s) 74, 1264
TseI GCWGC 3 cut(s) 445, 863, 1014
Tsp45I GTSAC 2 cut(s) 74, 1264
TspDTI ATGAA 7 cut(s) 299, 400, 546, 786, 798, 812, 1140
TspGWI ACGGA 2 cut(s) 1174, 1307
TspRI CASTG 3 cut(s) 40, 331, 646
Tth111I GACNNNGTC 1 cut(s) 424
Vha464I CTTAAG 1 cut(s) 167
VspI ATTAAT 2 cut(s) 711, 717
XapI RAATTY 2 cut(s) 819, 950
XceI RCATGY 2 cut(s) 874, 1237
XhoI CTCGAG 1 cut(s) 1043
XmnI GAANNNNTTC 1 cut(s) 999
XspI CTAG 1 cut(s) 1278
ZrmI AGTACT 2 cut(s) 231, 999
Zsp2I ATGCAT 1 cut(s) 876
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.