Rorug07G0044100

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000079
Physical Location & Seq
Forward (+)
3206482 .. 3209703
3222 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0044100.1

Sequence Viewer

Length: 1497 bp
ATGAGTCGGAGCGGCGAGGACCGGTTCGAGATCGCCTTCTTCGACGTGGAGACGACGGTGCCGACCCGACCCGGTCAGGGCTTCGCCTTATTGGAATTCGGATCCATCCTTGTTTGCCCCAGGAAGCTGATTGAGCTCGAGAGCTACTCCACTCTAATCCGACCCGCCGACCTCAATTCCATCAACTCCTTGTCCGTCCGCTGTAACGGCATTACCCGAGACGCCGTCATCGCCGCCCCGGGCTTCGATAAGATCGCCGATAGAGTTTTCGACATTCTCCATGGACGTATATGGGCCGGTCATAATATATTGAGGTTTGATTGCCCCCGGATTCGGGAGGCTTTTGCAAATATTGGTCGACCTGCACCAGAACCCAAAGGTACAATTGATTCTTTGGCTTTGTTGACTCAGCGATTTGGAAGGAGAGCTGGTAACATGAAGATGGCCACTCTTGCAACTTATTTTGGTCTTGGACAACAGACACACAGGAGTTTGGATGATGTTCGAATGAATCTTGAAGTACTCAAATATTGTGCTACAGTTTTATTCTTGGAGTCAAGCCTCCCGGACATATTAACAGAGAACAGCTGGGTTTCTCCAAATGCTACAACAAGAAGTCGAAGTGGTGGAAAGTTATCTCCTGAGGGGTCAAGCATGAACATAAATATTTCAAATCAAACAGGGGACAATCATCCAATAACATCTCTTAGGACTGAGACCACACAAGAAGTCTCTAATTTGCTTGAGACTGTCGAGGCCAGCACAAATCGACCAGATCCTTTTGACATGGGCCCACTTATCAATGAAGTGAAGAATGAGTTAGATCAGCAAGACATCAACATGGTGGAAACACCTGCACAAGAGTCTCCCAACAGTTCTCTCAATGCTTCTGTGACCAACAACTGTAATGCCACCATGGATTTTTTACAGCTCGATCAAGTTCTCATTCCTTATATTAGTGCTTCGCTTGTTCCATTGTATCGTGGGAGTCAAAGGATAAAGTTATTACACAAAGATGTCACTTTGCAGCTTTGCTGCAGTCATATGAAATTGCGGTTTGGAATCAATACGAAGTTTTTTGATCATGCTGGCCGACCACGACTGAATATTGTCTTTGATGCACCACCAAAATTATGTGAAGTTCTTGATGCATGCGATGGCCTTGCAAAGAAGTTGTCTTTGGACTCTGGAAGTAGCTCTGAATGGAGGCCTGTTGTGATCCGCAAACAGGGCTTCTACAACTACCCTACTGTGAGATTGCACATACAAACTGCAGTATGCGGGGACATTGCAATCTACGCCACAGAGATATATCAAAGAGACCCCTCTGGCACCGAGCAAAGGCTAGTCTTCTCTAAATTTGATGCTTCAGAACTTGGTGCCTTGTTCACCCGAGGGATGTTTATGGATGTGTTCTTCTCTTTGGATCCATATGACTATCAGCAGAGTGCAGGCATTAGGTTGGTGGCAAAGAAACTGATTATTCATTCCAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

498

Amino Acids

55.45

Weight (kDa)

6.18

Isoelectric Point (pI)

48.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RNase_T PF00929 13 - 175 2.2e-24 Exonuclease
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 862
Acc36I ACCTGC 2 cut(s) 370, 862
AccB1I GGYRCC 3 cut(s) 58, 1331, 1379
AccBSI CCGCTC 1 cut(s) 12
AccI GTMKAC 1 cut(s) 358
AciI CCGC 7 cut(s) 12, 165, 199, 234, 1054, 1222, 1281
AclWI GGATC 6 cut(s) 96, 109, 770, 1213, 1421, 1434
AcoI YGGCCR 2 cut(s) 444, 1090
AcsI RAATTY 2 cut(s) 95, 1358
AcuI CTGAAG 1 cut(s) 1353
AcyI GRCGYC 1 cut(s) 222
AfaI GTAC 2 cut(s) 382, 522
AfiI CCNNNNNNNGG 5 cut(s) 77, 333, 334, 1228, 1341
AgeI ACCGGT 1 cut(s) 21
AgsI TTSAA 2 cut(s) 518, 672
AjiI CACGTC 1 cut(s) 46
AjnI CCWGG 1 cut(s) 119
AjuI GAANNNNNNNTTGG 2 cut(s) 1163, 1195
AluBI AGCT 8 cut(s) 127, 136, 144, 428, 588, 931, 1030, 1197
AluI AGCT 8 cut(s) 127, 136, 144, 428, 588, 931, 1030, 1197
Alw21I GWGCWC 1 cut(s) 138
Alw26I GTCTC 7 cut(s) 44, 213, 710, 736, 740, 870, 1314
AlwI GGATC 6 cut(s) 96, 109, 770, 1213, 1421, 1434
Ama87I CYCGRG 4 cut(s) 137, 216, 238, 1392
AoxI GGCC 7 cut(s) 294, 444, 756, 790, 1090, 1159, 1208
ApaI GGGCCC 1 cut(s) 794
ApeKI GCWGC 2 cut(s) 1027, 1035
ApoI RAATTY 2 cut(s) 95, 1358
ArsI GACNNNNNNTTYG 2 cut(s) 1160, 1192
AsiGI ACCGGT 1 cut(s) 21
AspS9I GGNCC 4 cut(s) 19, 294, 790, 791
AsuC2I CCSGG 5 cut(s) 72, 239, 240, 328, 566
AsuHPI GGTGA 1 cut(s) 1381
AsuII TTCGAA 1 cut(s) 505
AvaI CYCGRG 4 cut(s) 137, 216, 238, 1392
AvaII GGWCC 1 cut(s) 19
AxyI CCTNAGG 1 cut(s) 642
BaeGI GKGCMC 1 cut(s) 794
BalI TGGCCA 1 cut(s) 446
BamHI GGATCC 2 cut(s) 101, 1426
BanI GGYRCC 3 cut(s) 58, 1331, 1379
BanII GRGCYC 2 cut(s) 138, 794
BbsI GAAGAC 1 cut(s) 1342
Bbv12I GWGCWC 1 cut(s) 138
BbvI GCAGC 2 cut(s) 1022, 1039
BccI CCATC 4 cut(s) 113, 188, 436, 1151
BceAI ACGGC 2 cut(s) 209, 223
BcgI CGANNNNNNTGC 2 cut(s) 1145, 1179
BciT130I CCWGG 1 cut(s) 121
BclI TGATCA 1 cut(s) 1081
BcnI CCSGG 5 cut(s) 72, 239, 240, 328, 566
BcoDI GTCTC 7 cut(s) 44, 213, 710, 736, 740, 870, 1314
BfaI CTAG 1 cut(s) 1346
BfmI CTRYAG 3 cut(s) 537, 1036, 1272
BfuAI ACCTGC 2 cut(s) 370, 862
BisI GCNGC 4 cut(s) 13, 234, 1028, 1036
BlsI GCNGC 4 cut(s) 14, 235, 1029, 1037
BmcAI AGTACT 1 cut(s) 522
Bme1390I CCNGG 6 cut(s) 72, 121, 239, 240, 328, 566
Bme18I GGWCC 1 cut(s) 19
BmeT110I CYCGRG 4 cut(s) 137, 216, 238, 1392
BmgBI CACGTC 1 cut(s) 46
BmgT120I GGNCC 4 cut(s) 19, 294, 790, 791
BmiI GGNNCC 6 cut(s) 60, 103, 792, 1333, 1381, 1428
BmrFI CCNGG 6 cut(s) 72, 121, 239, 240, 328, 566
BmsI GCATC 3 cut(s) 1108, 1138, 1354
BpiI GAAGAC 1 cut(s) 1342
BplI GAGNNNNNCTC 2 cut(s) 131, 163
Bpu14I TTCGAA 1 cut(s) 505
BpuEI CTTGAG 1 cut(s) 764
BpuMI CCSGG 5 cut(s) 72, 239, 240, 328, 566
BsaHI GRCGYC 1 cut(s) 222
BsaI GGTCTC 2 cut(s) 710, 1314
BsaJI CCNNGG 7 cut(s) 119, 237, 238, 280, 326, 915, 1393
BsaWI WCCGGW 1 cut(s) 21
BsaXI ACNNNNNCTCC 2 cut(s) 415, 445
Bsc4I CCNNNNNNNGG 5 cut(s) 77, 333, 334, 1228, 1341
Bse118I RCCGGY 2 cut(s) 21, 296
Bse21I CCTNAGG 1 cut(s) 642
Bse3DI GCAATG 1 cut(s) 1287
BseBI CCWGG 1 cut(s) 121
BseDI CCNNGG 7 cut(s) 119, 237, 238, 280, 326, 915, 1393
BseGI GGATG 5 cut(s) 105, 502, 691, 1404, 1414
BseLI CCNNNNNNNGG 5 cut(s) 77, 333, 334, 1228, 1341
BseMI GCAATG 1 cut(s) 1287
BseMII CTCAG 3 cut(s) 422, 633, 705
BseSI GKGCMC 1 cut(s) 794
BseXI GCAGC 2 cut(s) 1022, 1039
BseYI CCCAGC 1 cut(s) 588
BsgI GTGCAG 3 cut(s) 348, 840, 1470
BshFI GGCC 7 cut(s) 296, 446, 758, 792, 1092, 1161, 1210
BshNI GGYRCC 3 cut(s) 58, 1331, 1379
BshTI ACCGGT 1 cut(s) 21
BsiHKAI GWGCWC 1 cut(s) 138
BsiHKCI CYCGRG 4 cut(s) 137, 216, 238, 1392
BsiSI CCGG 6 cut(s) 22, 72, 239, 297, 328, 566
BslFI GGGAC 2 cut(s) 698, 1298
BslI CCNNNNNNNGG 5 cut(s) 77, 333, 334, 1228, 1341
BsmAI GTCTC 7 cut(s) 44, 213, 710, 736, 740, 870, 1314
BsmBI CGTCTC 2 cut(s) 44, 213
BsmFI GGGAC 2 cut(s) 698, 1298
BsnI GGCC 7 cut(s) 296, 446, 758, 792, 1092, 1161, 1210
Bso31I GGTCTC 2 cut(s) 710, 1314
BsoBI CYCGRG 4 cut(s) 137, 216, 238, 1392
Bsp119I TTCGAA 1 cut(s) 505
Bsp120I GGGCCC 1 cut(s) 790
Bsp1286I GDGCHC 2 cut(s) 138, 794
Bsp143I GATC 9 cut(s) 30, 101, 252, 775, 823, 934, 1081, 1218, 1426
Bsp19I CCATGG 2 cut(s) 280, 915
BspACI CCGC 7 cut(s) 12, 165, 199, 234, 1054, 1222, 1281
BspANI GGCC 7 cut(s) 296, 446, 758, 792, 1092, 1161, 1210
BspCNI CTCAG 3 cut(s) 421, 634, 706
BspLI GGNNCC 6 cut(s) 60, 103, 792, 1333, 1381, 1428
BspMAI CTGCAG 2 cut(s) 1040, 1276
BspMI ACCTGC 2 cut(s) 370, 862
BspPI GGATC 6 cut(s) 96, 109, 770, 1213, 1421, 1434
BspT104I TTCGAA 1 cut(s) 505
BspT107I GGYRCC 3 cut(s) 58, 1331, 1379
BspTNI GGTCTC 2 cut(s) 710, 1314
BsrBI CCGCTC 1 cut(s) 12
BsrDI GCAATG 1 cut(s) 1287
BsrFI RCCGGY 2 cut(s) 21, 296
BssAI RCCGGY 2 cut(s) 21, 296
BssECI CCNNGG 7 cut(s) 119, 237, 238, 280, 326, 915, 1393
BssMI GATC 9 cut(s) 30, 101, 252, 775, 823, 934, 1081, 1218, 1426
BssNI GRCGYC 1 cut(s) 222
BssT1I CCWWGG 2 cut(s) 280, 915
Bst2UI CCWGG 1 cut(s) 121
Bst4CI ACNGT 6 cut(s) 58, 541, 751, 875, 905, 1252
BstACI GRCGYC 1 cut(s) 222
BstBI TTCGAA 1 cut(s) 505
BstC8I GCNNGC 4 cut(s) 760, 1090, 1153, 1453
BstDEI CTNAG 4 cut(s) 408, 642, 707, 714
BstDSI CCRYGG 2 cut(s) 280, 915
BstF5I GGATG 5 cut(s) 105, 502, 691, 1404, 1414
BstKTI GATC 9 cut(s) 33, 104, 255, 778, 826, 937, 1084, 1221, 1429
BstMAI GTCTC 7 cut(s) 44, 213, 710, 736, 740, 870, 1314
BstMBI GATC 9 cut(s) 30, 101, 252, 775, 823, 934, 1081, 1218, 1426
BstMWI GCNNNNNNNGC 6 cut(s) 133, 207, 230, 452, 1230, 1298
BstNI CCWGG 1 cut(s) 121
BstNSI RCATGY 1 cut(s) 1155
BstSCI CCNGG 6 cut(s) 70, 119, 237, 238, 326, 564
BstSFI CTRYAG 3 cut(s) 537, 1036, 1272
BstSLI GKGCMC 1 cut(s) 794
BstV1I GCAGC 2 cut(s) 1022, 1039
BstV2I GAAGAC 1 cut(s) 1342
BstX2I RGATCY 3 cut(s) 101, 775, 1426
BstYI RGATCY 3 cut(s) 101, 775, 1426
Bsu36I CCTNAGG 1 cut(s) 642
BsuRI GGCC 7 cut(s) 296, 446, 758, 792, 1092, 1161, 1210
BtgI CCRYGG 2 cut(s) 280, 915
BtgZI GCGATG 2 cut(s) 214, 1170
BtrI CACGTC 1 cut(s) 46
BtsCI GGATG 5 cut(s) 105, 502, 691, 1404, 1414
BveI ACCTGC 2 cut(s) 370, 862
Cac8I GCNNGC 4 cut(s) 760, 1090, 1153, 1453
Cfr10I RCCGGY 2 cut(s) 21, 296
Cfr13I GGNCC 4 cut(s) 19, 294, 790, 791
Cfr9I CCCGGG 1 cut(s) 238
CseI GACGC 1 cut(s) 230
Csp6I GTAC 2 cut(s) 381, 521
CspAI ACCGGT 1 cut(s) 21
CviAII CATG 8 cut(s) 281, 436, 655, 787, 841, 916, 1085, 1152
CviQI GTAC 2 cut(s) 381, 521
DdeI CTNAG 4 cut(s) 408, 642, 707, 714
DpnI GATC 9 cut(s) 32, 103, 254, 777, 825, 936, 1083, 1220, 1428
DpnII GATC 9 cut(s) 30, 101, 252, 775, 823, 934, 1081, 1218, 1426
EaeI YGGCCR 2 cut(s) 444, 1090
Ecl136II GAGCTC 1 cut(s) 136
Eco130I CCWWGG 2 cut(s) 280, 915
Eco147I AGGCCT 1 cut(s) 1210
Eco24I GRGCYC 2 cut(s) 138, 794
Eco31I GGTCTC 2 cut(s) 710, 1314
Eco47I GGWCC 1 cut(s) 19
Eco53kI GAGCTC 1 cut(s) 136
Eco57I CTGAAG 1 cut(s) 1353
Eco81I CCTNAGG 1 cut(s) 642
Eco88I CYCGRG 4 cut(s) 137, 216, 238, 1392
EcoICRI GAGCTC 1 cut(s) 136
EcoRI GAATTC 1 cut(s) 95
EcoRII CCWGG 1 cut(s) 119
EcoT14I CCWWGG 2 cut(s) 280, 915
EcoT22I ATGCAT 1 cut(s) 1153
EcoT38I GRGCYC 2 cut(s) 138, 794
ErhI CCWWGG 2 cut(s) 280, 915
Esp3I CGTCTC 2 cut(s) 44, 213
FaeI CATG 8 cut(s) 284, 439, 658, 790, 844, 919, 1088, 1155
FaqI GGGAC 2 cut(s) 698, 1298
FatI CATG 8 cut(s) 280, 435, 654, 786, 840, 915, 1084, 1151
FauI CCCGC 2 cut(s) 172, 1274
FauNDI CATATG 2 cut(s) 1044, 1432
FbaI TGATCA 1 cut(s) 1081
FblI GTMKAC 1 cut(s) 358
Fnu4HI GCNGC 4 cut(s) 13, 234, 1028, 1036
FokI GGATG 5 cut(s) 92, 509, 678, 1411, 1421
FriOI GRGCYC 2 cut(s) 138, 794
Fsp4HI GCNGC 4 cut(s) 13, 234, 1028, 1036
FspBI CTAG 1 cut(s) 1346
GluI GCNGC 4 cut(s) 13, 234, 1028, 1036
GsaI CCCAGC 1 cut(s) 592
HaeIII GGCC 7 cut(s) 296, 446, 758, 792, 1092, 1161, 1210
HapII CCGG 6 cut(s) 22, 72, 239, 297, 328, 566
HgaI GACGC 1 cut(s) 230
Hin1I GRCGYC 1 cut(s) 222
Hin1II CATG 8 cut(s) 284, 439, 658, 790, 844, 919, 1088, 1155
HincII GTYRAC 2 cut(s) 359, 405
HindII GTYRAC 2 cut(s) 359, 405
HpaII CCGG 6 cut(s) 22, 72, 239, 297, 328, 566
HphI GGTGA 1 cut(s) 1381
Hpy166II GTNNAC 3 cut(s) 359, 405, 1389
Hpy188I TCNGA 5 cut(s) 9, 101, 161, 1201, 1372
Hpy188III TCNNGA 7 cut(s) 28, 139, 335, 515, 641, 1145, 1188
Hpy8I GTNNAC 3 cut(s) 359, 405, 1389
Hpy99I CGWCG 2 cut(s) 47, 58
HpyAV CCTTC 2 cut(s) 46, 414
HpyCH4III ACNGT 6 cut(s) 58, 541, 751, 875, 905, 1252
HpyCH4IV ACGT 2 cut(s) 45, 286
HpyF10VI GCNNNNNNNGC 6 cut(s) 133, 207, 230, 452, 1230, 1298
HpyF3I CTNAG 4 cut(s) 408, 642, 707, 714
HpySE526I ACGT 2 cut(s) 45, 286
Hsp92I GRCGYC 1 cut(s) 222
Hsp92II CATG 8 cut(s) 284, 439, 658, 790, 844, 919, 1088, 1155
Ksp22I TGATCA 1 cut(s) 1081
Kzo9I GATC 9 cut(s) 30, 101, 252, 775, 823, 934, 1081, 1218, 1426
LmnI GCTCC 1 cut(s) 9
Lsp1109I GCAGC 2 cut(s) 1022, 1039
LweI GCATC 3 cut(s) 1108, 1138, 1354
MaeI CTAG 1 cut(s) 1346
MaeII ACGT 2 cut(s) 45, 286
MaeIII GTNAC 4 cut(s) 203, 431, 892, 1018
MalI GATC 9 cut(s) 32, 103, 254, 777, 825, 936, 1083, 1220, 1428
MbiI CCGCTC 1 cut(s) 12
MboI GATC 9 cut(s) 30, 101, 252, 775, 823, 934, 1081, 1218, 1426
MboII GAAGA 5 cut(s) 31, 451, 823, 1342, 1408
MfeI CAATTG 2 cut(s) 384, 1492
MflI RGATCY 3 cut(s) 101, 775, 1426
MhlI GDGCHC 2 cut(s) 138, 794
MlsI TGGCCA 1 cut(s) 446
MluCI AATT 8 cut(s) 95, 175, 384, 736, 1049, 1130, 1358, 1492
MluNI TGGCCA 1 cut(s) 446
MlyI GAGTC 6 cut(s) 13, 400, 563, 872, 997, 1178
MmeI TCCRAC 1 cut(s) 184
Mox20I TGGCCA 1 cut(s) 446
Mph1103I ATGCAT 1 cut(s) 1153
MscI TGGCCA 1 cut(s) 446
MseI TTAA 1 cut(s) 575
MslI CAYNNNNRTG 3 cut(s) 440, 839, 1014
Msp20I TGGCCA 1 cut(s) 446
MspA1I CMGCKG 2 cut(s) 201, 588
MspI CCGG 6 cut(s) 22, 72, 239, 297, 328, 566
MspR9I CCNGG 6 cut(s) 72, 121, 239, 240, 328, 566
MunI CAATTG 2 cut(s) 384, 1492
MvaI CCWGG 1 cut(s) 121
MwoI GCNNNNNNNGC 6 cut(s) 133, 207, 230, 452, 1230, 1298
NciI CCSGG 5 cut(s) 72, 239, 240, 328, 566
NcoI CCATGG 2 cut(s) 280, 915
NdeI CATATG 2 cut(s) 1044, 1432
NdeII GATC 9 cut(s) 30, 101, 252, 775, 823, 934, 1081, 1218, 1426
NlaIII CATG 8 cut(s) 284, 439, 658, 790, 844, 919, 1088, 1155
NlaIV GGNNCC 6 cut(s) 60, 103, 792, 1333, 1381, 1428
NmuCI GTSAC 2 cut(s) 892, 1018
NsiI ATGCAT 1 cut(s) 1153
NspI RCATGY 1 cut(s) 1155
NspV TTCGAA 1 cut(s) 505
PaeI GCATGC 1 cut(s) 1155
PaeR7I CTCGAG 1 cut(s) 137
PaqCI CACCTGC 1 cut(s) 862
PceI AGGCCT 1 cut(s) 1210
PcsI WCGNNNNNNNCGW 2 cut(s) 39, 59
PfeI GAWTC 4 cut(s) 331, 389, 511, 1062
PflFI GACNNNGTC 2 cut(s) 72, 224
PfoI TCCNGGA 1 cut(s) 564
PinAI ACCGGT 1 cut(s) 21
PkrI GCNGC 4 cut(s) 14, 235, 1029, 1037
PleI GAGTC 6 cut(s) 12, 400, 562, 871, 996, 1178
PpsI GAGTC 6 cut(s) 12, 400, 562, 871, 996, 1178
Psp124BI GAGCTC 1 cut(s) 138
Psp6I CCWGG 1 cut(s) 119
PspFI CCCAGC 1 cut(s) 588
PspGI CCWGG 1 cut(s) 119
PspN4I GGNNCC 6 cut(s) 60, 103, 792, 1333, 1381, 1428
PspOMI GGGCCC 1 cut(s) 790
PspPI GGNCC 4 cut(s) 19, 294, 790, 791
PstI CTGCAG 2 cut(s) 1040, 1276
PsuI RGATCY 3 cut(s) 101, 775, 1426
PsyI GACNNNGTC 2 cut(s) 72, 224
PvuII CAGCTG 1 cut(s) 588
RsaI GTAC 2 cut(s) 382, 522
RsaNI GTAC 2 cut(s) 381, 521
RseI CAYNNNNRTG 3 cut(s) 440, 839, 1014
SacI GAGCTC 1 cut(s) 138
SalI GTCGAC 1 cut(s) 357
SaqAI TTAA 1 cut(s) 575
SatI GCNGC 4 cut(s) 13, 234, 1028, 1036
Sau3AI GATC 9 cut(s) 30, 101, 252, 775, 823, 934, 1081, 1218, 1426
Sau96I GGNCC 4 cut(s) 19, 294, 790, 791
ScaI AGTACT 1 cut(s) 522
SchI GAGTC 6 cut(s) 13, 400, 563, 872, 997, 1178
ScrFI CCNGG 6 cut(s) 72, 121, 239, 240, 328, 566
SduI GDGCHC 2 cut(s) 138, 794
SfaNI GCATC 3 cut(s) 1108, 1138, 1354
SfcI CTRYAG 3 cut(s) 537, 1036, 1272
Sfr274I CTCGAG 1 cut(s) 137
SfuI TTCGAA 1 cut(s) 505
SinI GGWCC 1 cut(s) 19
SlaI CTCGAG 1 cut(s) 137
SmaI CCCGGG 1 cut(s) 240
SmiMI CAYNNNNRTG 3 cut(s) 440, 839, 1014
SmlI CTYRAG 2 cut(s) 137, 743
SmoI CTYRAG 2 cut(s) 137, 743
SphI GCATGC 1 cut(s) 1155
Sse9I AATT 8 cut(s) 95, 175, 384, 736, 1049, 1130, 1358, 1492
SseBI AGGCCT 1 cut(s) 1210
SsiI CCGC 7 cut(s) 12, 165, 199, 234, 1054, 1222, 1281
SspI AATATT 4 cut(s) 352, 530, 667, 1108
SspMI CTAG 1 cut(s) 1346
SstI GAGCTC 1 cut(s) 138
StuI AGGCCT 1 cut(s) 1210
StyD4I CCNGG 6 cut(s) 70, 119, 237, 238, 326, 564
StyI CCWWGG 2 cut(s) 280, 915
TaaI ACNGT 6 cut(s) 58, 541, 751, 875, 905, 1252
TaiI ACGT 2 cut(s) 48, 289
TasI AATT 8 cut(s) 95, 175, 384, 736, 1049, 1130, 1358, 1492
TatI WGTACW 1 cut(s) 520
TauI GCSGC 2 cut(s) 15, 236
TfiI GAWTC 4 cut(s) 331, 389, 511, 1062
Tru1I TTAA 1 cut(s) 575
Tru9I TTAA 1 cut(s) 575
TseFI GTSAC 2 cut(s) 892, 1018
TseI GCWGC 2 cut(s) 1027, 1035
Tsp45I GTSAC 2 cut(s) 892, 1018
TspDTI ATGAA 6 cut(s) 452, 524, 671, 819, 1061, 1475
TspGWI ACGGA 1 cut(s) 184
TspMI CCCGGG 1 cut(s) 238
Tth111I GACNNNGTC 2 cut(s) 72, 224
VpaK11BI GGWCC 1 cut(s) 19
XapI RAATTY 2 cut(s) 95, 1358
XceI RCATGY 1 cut(s) 1155
XhoI CTCGAG 1 cut(s) 137
XmaI CCCGGG 1 cut(s) 238
XmiI GTMKAC 1 cut(s) 358
XspI CTAG 1 cut(s) 1346
ZrmI AGTACT 1 cut(s) 522
Zsp2I ATGCAT 1 cut(s) 1153
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.