FvH4_5g02220

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000079
Physical Location & Seq
Reverse (-)
1367977 .. 1369738
1762 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g02220.t2

Sequence Viewer

Length: 1434 bp
ATGGCTTCAAGTTTAGTGCATCACAAAGGAAGAACTGAAGATAGGATCAGTGGGATGCCAGATGCAGTTCTTTGCCACATTCTCTCCTTCCTTTTCACCAGAGAGGCTGTACAGACCAGTGTTTTGTCTCATAGATGGAAGAATGTGTGGGCTTCTGTTCCCGTTCTAGATTTAGATGAGGAAGAACATGATACGCATATATATCCCGAAGATAACCCGGATTGGTTTGCACAGTTTGTGACTCGTGTGCTTTTGTTTCGTTGCTCGGGAGACATTCATAGGTTCCGTCTTTTCACTAAGGGGATGGATGATGTTTCTCTTGTTTATGCTTGGATTTCCACTGCCATTAGGCGTAATGTTGTGGAGCTTGATCTTACTGTCAGCACACTTTCAGACCCATGTTTTGAGATCCCCAAAAGCCTTTTCATGTGCAGCACATTGGTCCATTTCAAGTTGTGGCTGCATGAAAATATTAGGGTCATGACTCCTACTAGTTCAAATTGTTTCCCGAGCCTCAAGTTCCTTCATGTTACAGTTCGTTGTCCTGATTCTGACTCAATGGAGAAGCTCTTTTCTCGTTTACCTGTGCTTGAAGAGCTGATTATAGATGGAGAGCTTATATACACAACAGCTTTCAATCTTGACATATCTGCACCCAAACTGAAGAGACTACAAATTGAGCTAAATGTCCGTAAGTATGGTATGAATTTTGCTGCTAATGACTTTGTATGCCAAATTTTCGTTAATGTTGATGCTCCAAATCTTGAAGAGATAGATATCTGCTTTGATGCTCTGGTGAGCTTTTCTTTGAAGAACGCCAAATGTCTACACAAAGCGAATATAGGATTCTTTTGTGTGCAAGAGCTTAAGAAGCATGATCGTTTCCTTGGCCTAGCTGATCGCATACGTCAGATTTTCGCTGGAATTTGTGATGCTAAGTACCTGACAGTTAATACTCCACTTCTGACGGCCCTTGACGTTGGACATCAACATCTTCTGCCTATGTTTAATAATTTGAACTACTTGGAACTACAGCTTCATACTTGTCGAAGTCTGCAATCACTGGCAACTGTGCTCAAAATATCTCCACATTTGGTGCATCTGAAGATATCACGGAATAGGAAACAGATGTATGCCAATGTCGATGAGGGTGAGCTTGAACCTGGATGGGACGAACCAGAGTCTGTGCCTGTTTGTTTGATTTCACACCTCAAGACTATTTGCCTATGGGATTTTCAGGGGTGTCCAGATGACATGGAAGTTGCAATGTACTTGGTGAAGCATGGCAAGGCGTTGAATAAGGTGACTATTTCTAATCACTTCTGTCAAGACAAAGAGATCGAGATACAGTCTCCTATTGCCTTGTGGTCGAAATTTTCAAAGTTCCCCAGGGGTTCCAAGACTTGTAAAATTCAATTTCAGACAATCATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

478

Amino Acids

54.7

Weight (kDa)

6.37

Isoelectric Point (pI)

41.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 16 - 55 1.1e-06 F-box domain
LRR_At5g56370 PF24758 110 - 261 3.7e-10 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 826
AclWI GGATC 2 cut(s) 53, 403
AcsI RAATTY 5 cut(s) 706, 735, 924, 1373, 1410
AcuI CTGAAG 3 cut(s) 57, 683, 1124
AfaI GTAC 3 cut(s) 111, 941, 1271
AflII CTTAAG 1 cut(s) 866
AhlI ACTAGT 1 cut(s) 491
AjnI CCWGG 2 cut(s) 1162, 1388
AjuI GAANNNNNNNTTGG 2 cut(s) 407, 439
Alw21I GWGCWC 1 cut(s) 1077
Alw26I GTCTC 4 cut(s) 132, 264, 661, 1356
AlwI GGATC 2 cut(s) 53, 403
AlwNI CAGNNNCTG 1 cut(s) 1184
Ama87I CYCGRG 2 cut(s) 265, 508
AoxI GGCC 2 cut(s) 889, 969
ApeKI GCWGC 3 cut(s) 432, 460, 713
ApoI RAATTY 5 cut(s) 706, 735, 924, 1373, 1410
ArsI GACNNNNNNTTYG 4 cut(s) 106, 138, 386, 418
AspS9I GGNCC 2 cut(s) 442, 970
AsuC2I CCSGG 1 cut(s) 218
AsuHPI GGTGA 5 cut(s) 88, 808, 1163, 1288, 1315
AvaI CYCGRG 2 cut(s) 265, 508
AvaII GGWCC 1 cut(s) 442
BauI CACGAG 1 cut(s) 243
Bbv12I GWGCWC 1 cut(s) 1077
BbvI GCAGC 3 cut(s) 444, 447, 700
BccI CCATC 4 cut(s) 129, 298, 602, 1161
BceAI ACGGC 1 cut(s) 984
BciT130I CCWGG 2 cut(s) 1164, 1390
BcnI CCSGG 1 cut(s) 218
BcoDI GTCTC 4 cut(s) 132, 264, 661, 1356
BcuI ACTAGT 1 cut(s) 491
BfaI CTAG 3 cut(s) 167, 492, 893
BfmI CTRYAG 1 cut(s) 1031
BfrI CTTAAG 1 cut(s) 866
BisI GCNGC 3 cut(s) 433, 461, 714
BlsI GCNGC 3 cut(s) 434, 462, 715
Bme1390I CCNGG 3 cut(s) 218, 1164, 1390
Bme18I GGWCC 1 cut(s) 442
BmeT110I CYCGRG 2 cut(s) 265, 508
BmgT120I GGNCC 2 cut(s) 442, 970
BmiI GGNNCC 2 cut(s) 284, 1396
BmrFI CCNGG 3 cut(s) 218, 1164, 1390
BmsI GCATC 7 cut(s) 28, 45, 52, 742, 778, 922, 1108
BpuEI CTTGAG 2 cut(s) 500, 1196
BpuMI CCSGG 1 cut(s) 218
BsaBI GATNNNNATC 1 cut(s) 776
BsaJI CCNNGG 3 cut(s) 886, 1388, 1389
BsaXI ACNNNNNCTCC 2 cut(s) 68, 98
Bse1I ACTGG 2 cut(s) 117, 1068
Bse3DI GCAATG 1 cut(s) 1272
Bse8I GATNNNNATC 1 cut(s) 776
BseBI CCWGG 2 cut(s) 1164, 1390
BseDI CCNNGG 3 cut(s) 886, 1388, 1389
BseGI GGATG 4 cut(s) 60, 309, 313, 1172
BseJI GATNNNNATC 1 cut(s) 776
BseMI GCAATG 1 cut(s) 1272
BseNI ACTGG 2 cut(s) 117, 1068
BseXI GCAGC 3 cut(s) 444, 447, 700
BsgI GTGCAG 2 cut(s) 451, 636
BshFI GGCC 2 cut(s) 891, 971
BsiHKAI GWGCWC 1 cut(s) 1077
BsiHKCI CYCGRG 2 cut(s) 265, 508
BsiSI CCGG 1 cut(s) 218
BslFI GGGAC 1 cut(s) 1184
BsmAI GTCTC 4 cut(s) 132, 264, 661, 1356
BsmFI GGGAC 1 cut(s) 1184
BsnI GGCC 2 cut(s) 891, 971
BsoBI CYCGRG 2 cut(s) 265, 508
Bsp1286I GDGCHC 1 cut(s) 1077
Bsp1407I TGTACA 1 cut(s) 109
Bsp143I GATC 6 cut(s) 45, 370, 408, 877, 898, 1338
BspANI GGCC 2 cut(s) 891, 971
BspHI TCATGA 1 cut(s) 480
BspLI GGNNCC 2 cut(s) 284, 1396
BspPI GGATC 2 cut(s) 53, 403
BspQI GCTCTTC 1 cut(s) 588
BspTI CTTAAG 1 cut(s) 866
BsrDI GCAATG 1 cut(s) 1272
BsrGI TGTACA 1 cut(s) 109
BsrI ACTGG 2 cut(s) 117, 1068
BssECI CCNNGG 3 cut(s) 886, 1388, 1389
BssMI GATC 6 cut(s) 45, 370, 408, 877, 898, 1338
BssSI CACGAG 1 cut(s) 243
BssT1I CCWWGG 1 cut(s) 886
Bst2BI CACGAG 1 cut(s) 243
Bst2UI CCWGG 2 cut(s) 1164, 1390
Bst4CI ACNGT 6 cut(s) 234, 379, 535, 949, 1072, 1350
Bst6I CTCTTC 3 cut(s) 588, 659, 762
BstAFI CTTAAG 1 cut(s) 866
BstAUI TGTACA 1 cut(s) 109
BstDEI CTNAG 2 cut(s) 297, 936
BstF5I GGATG 4 cut(s) 60, 309, 313, 1172
BstKTI GATC 6 cut(s) 48, 373, 411, 880, 901, 1341
BstMAI GTCTC 4 cut(s) 132, 264, 661, 1356
BstMBI GATC 6 cut(s) 45, 370, 408, 877, 898, 1338
BstMWI GCNNNNNNNGC 2 cut(s) 595, 871
BstNI CCWGG 2 cut(s) 1164, 1390
BstSCI CCNGG 3 cut(s) 216, 1162, 1388
BstSFI CTRYAG 1 cut(s) 1031
BstV1I GCAGC 3 cut(s) 444, 447, 700
BstX2I RGATCY 1 cut(s) 408
BstYI RGATCY 1 cut(s) 408
BsuRI GGCC 2 cut(s) 891, 971
BtsCI GGATG 4 cut(s) 60, 309, 313, 1172
BtsI GCAGTG 1 cut(s) 339
BtsIMutI CAGTG 4 cut(s) 55, 124, 339, 1061
CaiI CAGNNNCTG 1 cut(s) 1184
CciI TCATGA 1 cut(s) 480
Cfr13I GGNCC 2 cut(s) 442, 970
Csp6I GTAC 3 cut(s) 110, 940, 1270
CviAII CATG 9 cut(s) 188, 399, 427, 464, 481, 527, 875, 1255, 1283
CviQI GTAC 3 cut(s) 110, 940, 1270
DdeI CTNAG 2 cut(s) 297, 936
DpnI GATC 6 cut(s) 47, 372, 410, 879, 900, 1340
DpnII GATC 6 cut(s) 45, 370, 408, 877, 898, 1338
Eam1104I CTCTTC 3 cut(s) 588, 659, 762
EarI CTCTTC 3 cut(s) 588, 659, 762
Eco130I CCWWGG 1 cut(s) 886
Eco32I GATATC 2 cut(s) 778, 1110
Eco47I GGWCC 1 cut(s) 442
Eco57I CTGAAG 3 cut(s) 57, 683, 1124
Eco88I CYCGRG 2 cut(s) 265, 508
EcoRII CCWGG 2 cut(s) 1162, 1388
EcoRV GATATC 2 cut(s) 778, 1110
EcoT14I CCWWGG 1 cut(s) 886
ErhI CCWWGG 1 cut(s) 886
FaeI CATG 9 cut(s) 191, 402, 430, 467, 484, 530, 878, 1258, 1286
FaqI GGGAC 1 cut(s) 1184
FatI CATG 9 cut(s) 187, 398, 426, 463, 480, 526, 874, 1254, 1282
FblI GTMKAC 1 cut(s) 826
Fnu4HI GCNGC 3 cut(s) 433, 461, 714
FokI GGATG 4 cut(s) 67, 316, 320, 1179
Fsp4HI GCNGC 3 cut(s) 433, 461, 714
FspBI CTAG 3 cut(s) 167, 492, 893
GluI GCNGC 3 cut(s) 433, 461, 714
HaeIII GGCC 2 cut(s) 891, 971
HapII CCGG 1 cut(s) 218
Hin1II CATG 9 cut(s) 191, 402, 430, 467, 484, 530, 878, 1258, 1286
HinfI GANTC 6 cut(s) 241, 484, 548, 554, 846, 1181
HpaII CCGG 1 cut(s) 218
HphI GGTGA 5 cut(s) 88, 808, 1163, 1288, 1315
Hpy166II GTNNAC 2 cut(s) 581, 827
Hpy188I TCNGA 6 cut(s) 394, 553, 912, 966, 1104, 1422
Hpy8I GTNNAC 2 cut(s) 581, 827
HpyAV CCTTC 2 cut(s) 97, 533
HpyCH4III ACNGT 6 cut(s) 234, 379, 535, 949, 1072, 1350
HpyCH4IV ACGT 2 cut(s) 907, 978
HpyF10VI GCNNNNNNNGC 2 cut(s) 595, 871
HpyF3I CTNAG 2 cut(s) 297, 936
HpySE526I ACGT 2 cut(s) 907, 978
Hsp92II CATG 9 cut(s) 191, 402, 430, 467, 484, 530, 878, 1258, 1286
Kzo9I GATC 6 cut(s) 45, 370, 408, 877, 898, 1338
LguI GCTCTTC 1 cut(s) 588
LmnI GCTCC 2 cut(s) 364, 760
Lsp1109I GCAGC 3 cut(s) 444, 447, 700
LweI GCATC 7 cut(s) 28, 45, 52, 742, 778, 922, 1108
MaeI CTAG 3 cut(s) 167, 492, 893
MaeII ACGT 2 cut(s) 907, 978
MaeIII GTNAC 3 cut(s) 238, 529, 1303
MalI GATC 6 cut(s) 47, 372, 410, 879, 900, 1340
MboI GATC 6 cut(s) 45, 370, 408, 877, 898, 1338
MflI RGATCY 1 cut(s) 408
MhlI GDGCHC 1 cut(s) 1077
MluCI AATT 9 cut(s) 499, 675, 706, 735, 924, 1012, 1373, 1410, 1415
MlyI GAGTC 4 cut(s) 235, 478, 548, 1190
MmeI TCCRAC 1 cut(s) 961
MnlI CCTC 5 cut(s) 97, 172, 524, 1141, 1220
MseI TTAA 4 cut(s) 744, 867, 951, 1008
MspCI CTTAAG 1 cut(s) 866
MspI CCGG 1 cut(s) 218
MspR9I CCNGG 3 cut(s) 218, 1164, 1390
MvaI CCWGG 2 cut(s) 1164, 1390
MwoI GCNNNNNNNGC 2 cut(s) 595, 871
NciI CCSGG 1 cut(s) 218
NdeII GATC 6 cut(s) 45, 370, 408, 877, 898, 1338
NlaIII CATG 9 cut(s) 191, 402, 430, 467, 484, 530, 878, 1258, 1286
NlaIV GGNNCC 2 cut(s) 284, 1396
NmuCI GTSAC 2 cut(s) 238, 1303
PagI TCATGA 1 cut(s) 480
PasI CCCWGGG 1 cut(s) 1389
PciSI GCTCTTC 1 cut(s) 588
PfeI GAWTC 2 cut(s) 548, 846
PkrI GCNGC 3 cut(s) 434, 462, 715
PleI GAGTC 4 cut(s) 235, 478, 548, 1189
PpsI GAGTC 4 cut(s) 235, 478, 548, 1189
Psp6I CCWGG 2 cut(s) 1162, 1388
PspGI CCWGG 2 cut(s) 1162, 1388
PspN4I GGNNCC 2 cut(s) 284, 1396
PspPI GGNCC 2 cut(s) 442, 970
PstNI CAGNNNCTG 1 cut(s) 1184
PsuI RGATCY 1 cut(s) 408
RsaI GTAC 3 cut(s) 111, 941, 1271
RsaNI GTAC 3 cut(s) 110, 940, 1270
SapI GCTCTTC 1 cut(s) 588
SaqAI TTAA 4 cut(s) 744, 867, 951, 1008
SatI GCNGC 3 cut(s) 433, 461, 714
Sau3AI GATC 6 cut(s) 45, 370, 408, 877, 898, 1338
Sau96I GGNCC 2 cut(s) 442, 970
SchI GAGTC 4 cut(s) 235, 478, 548, 1190
ScrFI CCNGG 3 cut(s) 218, 1164, 1390
SduI GDGCHC 1 cut(s) 1077
SfaNI GCATC 7 cut(s) 28, 45, 52, 742, 778, 922, 1108
SfcI CTRYAG 1 cut(s) 1031
SinI GGWCC 1 cut(s) 442
SmlI CTYRAG 3 cut(s) 515, 866, 1211
SmoI CTYRAG 3 cut(s) 515, 866, 1211
SpeI ACTAGT 1 cut(s) 491
Sse9I AATT 9 cut(s) 499, 675, 706, 735, 924, 1012, 1373, 1410, 1415
SspI AATATT 1 cut(s) 472
SspMI CTAG 3 cut(s) 167, 492, 893
StyD4I CCNGG 3 cut(s) 216, 1162, 1388
StyI CCWWGG 1 cut(s) 886
TaaI ACNGT 6 cut(s) 234, 379, 535, 949, 1072, 1350
TaiI ACGT 2 cut(s) 910, 981
TaqI TCGA 4 cut(s) 1048, 1143, 1341, 1370
TasI AATT 9 cut(s) 499, 675, 706, 735, 924, 1012, 1373, 1410, 1415
TatI WGTACW 2 cut(s) 109, 1269
TfiI GAWTC 2 cut(s) 548, 846
Tru1I TTAA 4 cut(s) 744, 867, 951, 1008
Tru9I TTAA 4 cut(s) 744, 867, 951, 1008
TscAI CASTG 4 cut(s) 55, 124, 346, 1068
TseFI GTSAC 2 cut(s) 238, 1303
TseI GCWGC 3 cut(s) 432, 460, 713
Tsp45I GTSAC 2 cut(s) 238, 1303
TspDTI ATGAA 6 cut(s) 266, 415, 480, 515, 719, 1028
TspGWI ACGGA 3 cut(s) 275, 680, 1129
TspRI CASTG 4 cut(s) 55, 124, 346, 1068
Vha464I CTTAAG 1 cut(s) 866
VpaK11BI GGWCC 1 cut(s) 442
XapI RAATTY 5 cut(s) 706, 735, 924, 1373, 1410
XbaI TCTAGA 1 cut(s) 166
XmiI GTMKAC 1 cut(s) 826
XspI CTAG 3 cut(s) 167, 492, 893
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.