FvH4_3g17580

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000079
Physical Location & Seq
Reverse (-)
11196171 .. 11198985
2815 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g17580.t2

Sequence Viewer

Length: 1350 bp
ATGGATTCAGATTCAAAGCGTCAAGAACAAGGAGTTGATAGAATTAGTGCATTGCCCGATGCACTTGTTTGCCACATACTGTCATTCCTTCCTACAATATATGCTGTGTGGACCACCCTTCTGTCCAGGAGATGGAACAATTTATGGAGGTCTCTTCTCAATTTGGACTTCAATGACGAAGACTTCCCTACCAAGAGGACTGATCATTTTATGAAATTTGTTGGTTGCGTATTTTCCTCTCGTGGCTCATCAGACATTCGGAAACTCTCTCTTCGCATCAACCATTGTGAGAACCTCAGTATTGGGGCTTTCTCTCGCGTTTATAGGTGGATTTGTGCTGCCACTAGGAAGAACCTTGTTGAACTTGATTTCTGTCTTTGGTTTGTGTCTAGCTCTGGCCAGAATGATGAGTTAGAACTGCCTCTAAGCCTTTTCAAATGCAAAACACTTGAGGTTTTGTCATTGCTTTCAAATTGCATCACCTACCCTGCTGCTACAAAAGTCTCTGCACCTGAATTGAAGACACTGAGAATATCGTTGGACTACTTCAGTCACAACTATATGCGTCCCAACAATATTTTTATCAATGCCCCAAAGCTGGAGAACCTTGGAGTCACAGATGGTGTTTTGACAAATTACATTTTGGAGAGTAAAAGATGTCCAGAAAGAACTACGATTGAATATGATGACAGATGTCGAAATGATGATGATGATTGGTTTCGAGATAAAGATGATGTATTTGAAGATGAAGCTCCAAGATTCACTAACCGCGCAGCCGCTTTACTTGCAAAAGTCCAGAATGTTAAATATCTGTCTCTTGATTCTCGTCCTAAATGTTTGGAGGCTTGGTGTGTACCCGCTTTGGAAAATTTGGGCGAATTGGACTTGGTTCTTCGGGACTGCTACAACTGGGAATTGCTAACAGAGCTGCTGAAGAGATCACCTAAGCTGGAATATCTTGGCTTAGAACATAAAAATACCAGCTATGAATTAATTTATGATGAAGTCGAGGATACCCCAGAGCATGAATGGAATCCACCCGAGTTTGTGCCTATGTGTTTGTCATCAAGCCTCAAGACTATCTGCGTATACAGATTCAAAGGAAGGCGGTATGAGATGGAAGTTGCAAAGTATTTGTTAAACTATGGTGAAGTTTTGAATACCATGACTATTTCAACCAAGAGCCGGTTCAATACTCAGGATGGTTGTCCATATAAAACAGAGGAAGAGATATGCAAGGAATTTCGCGTGTGTCAAAAGGGCTCAAAGAATTGCCAAGTTAACATAATTTATGATGCAGGTTTTGATTTCAGTGAATTCCTTTCGAAAGGTTCAGTTTTTAGTTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

450

Amino Acids

52.08

Weight (kDa)

5.37

Isoelectric Point (pI)

44.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 15 - 53 1.4e-07 F-box domain
LRR_At1g61320_AtMIF1 PF23622 83 - 254 2.9e-06 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 109 - 258 3.9e-10 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 396 - 440 2.8e-13 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1289
AccB7I CCANNNNNTGG 1 cut(s) 132
AccI GTMKAC 1 cut(s) 1089
AccII CGCG 3 cut(s) 318, 771, 1248
AciI CCGC 4 cut(s) 769, 777, 858, 1108
AcoI YGGCCR 1 cut(s) 397
AcsI RAATTY 4 cut(s) 215, 868, 1241, 1316
AcuI CTGAAG 2 cut(s) 532, 953
AfaI GTAC 1 cut(s) 855
AfiI CCNNNNNNNGG 3 cut(s) 132, 598, 1185
AjnI CCWGG 1 cut(s) 125
AjuI GAANNNNNNNTTGG 2 cut(s) 1172, 1204
AluBI AGCT 6 cut(s) 393, 598, 752, 928, 949, 984
AluI AGCT 6 cut(s) 393, 598, 752, 928, 949, 984
Alw26I GTCTC 3 cut(s) 156, 508, 819
Ama87I CYCGRG 1 cut(s) 1040
AoxI GGCC 1 cut(s) 397
ApeKI GCWGC 4 cut(s) 338, 491, 773, 928
ApoI RAATTY 4 cut(s) 215, 868, 1241, 1316
AseI ATTAAT 1 cut(s) 992
AspLEI GCGC 1 cut(s) 773
AspS9I GGNCC 1 cut(s) 111
AsuHPI GGTGA 3 cut(s) 472, 933, 1160
AsuII TTCGAA 1 cut(s) 1325
AvaI CYCGRG 1 cut(s) 1040
AvaII GGWCC 1 cut(s) 111
BalI TGGCCA 1 cut(s) 399
BanII GRGCYC 1 cut(s) 1265
BauI CACGAG 1 cut(s) 240
BbsI GAAGAC 2 cut(s) 186, 527
BbvI GCAGC 4 cut(s) 325, 478, 785, 915
BccI CCATC 4 cut(s) 126, 614, 1111, 1196
BciT130I CCWGG 1 cut(s) 127
BciVI GTATCC 1 cut(s) 1006
BclI TGATCA 1 cut(s) 202
BcoDI GTCTC 3 cut(s) 156, 508, 819
BfaI CTAG 2 cut(s) 345, 390
BfuAI ACCTGC 1 cut(s) 1289
BfuI GTATCC 1 cut(s) 1006
BisI GCNGC 5 cut(s) 339, 492, 774, 777, 929
BlsI GCNGC 5 cut(s) 340, 493, 775, 778, 930
Bme1390I CCNGG 1 cut(s) 127
Bme18I GGWCC 1 cut(s) 111
BmeT110I CYCGRG 1 cut(s) 1040
BmgT120I GGNCC 1 cut(s) 111
BmrFI CCNGG 1 cut(s) 127
BmrI ACTGGG 1 cut(s) 919
BmsI GCATC 4 cut(s) 49, 285, 486, 1285
BmuI ACTGGG 1 cut(s) 919
BoxI GACNNNNGTC 1 cut(s) 693
BpiI GAAGAC 2 cut(s) 186, 527
BpmI CTGGAG 1 cut(s) 620
Bpu10I CCTNAGC 1 cut(s) 945
Bpu14I TTCGAA 1 cut(s) 1325
BpuEI CTTGAG 2 cut(s) 470, 1058
BsaI GGTCTC 1 cut(s) 156
BsaJI CCNNGG 1 cut(s) 607
BsaXI ACNNNNNCTCC 2 cut(s) 833, 863
Bsc4I CCNNNNNNNGG 3 cut(s) 132, 598, 1185
Bse118I RCCGGY 1 cut(s) 1185
Bse1I ACTGG 1 cut(s) 914
Bse3DI GCAATG 2 cut(s) 50, 461
BseBI CCWGG 1 cut(s) 127
BseDI CCNNGG 1 cut(s) 607
BseGI GGATG 1 cut(s) 1207
BseLI CCNNNNNNNGG 3 cut(s) 132, 598, 1185
BseMI GCAATG 2 cut(s) 50, 461
BseMII CTCAG 3 cut(s) 310, 518, 1211
BseNI ACTGG 1 cut(s) 914
BseXI GCAGC 4 cut(s) 325, 478, 785, 915
BsgI GTGCAG 1 cut(s) 492
Bsh1236I CGCG 3 cut(s) 318, 771, 1248
BshFI GGCC 1 cut(s) 399
BsiHKCI CYCGRG 1 cut(s) 1040
BsiSI CCGG 1 cut(s) 1186
BslFI GGGAC 2 cut(s) 552, 911
BslI CCNNNNNNNGG 3 cut(s) 132, 598, 1185
BsmAI GTCTC 3 cut(s) 156, 508, 819
BsmFI GGGAC 2 cut(s) 552, 911
BsnI GGCC 1 cut(s) 399
Bso31I GGTCTC 1 cut(s) 156
BsoBI CYCGRG 1 cut(s) 1040
Bsp119I TTCGAA 1 cut(s) 1325
Bsp1286I GDGCHC 1 cut(s) 1265
Bsp143I GATC 2 cut(s) 202, 938
BspACI CCGC 4 cut(s) 769, 777, 858, 1108
BspANI GGCC 1 cut(s) 399
BspCNI CTCAG 3 cut(s) 309, 519, 1210
BspFNI CGCG 3 cut(s) 318, 771, 1248
BspMI ACCTGC 1 cut(s) 1289
BspT104I TTCGAA 1 cut(s) 1325
BspTNI GGTCTC 1 cut(s) 156
BsrDI GCAATG 2 cut(s) 50, 461
BsrFI RCCGGY 1 cut(s) 1185
BsrI ACTGG 1 cut(s) 914
BssAI RCCGGY 1 cut(s) 1185
BssECI CCNNGG 1 cut(s) 607
BssMI GATC 2 cut(s) 202, 938
BssNAI GTATAC 1 cut(s) 1090
BssSI CACGAG 1 cut(s) 240
BssT1I CCWWGG 1 cut(s) 607
Bst1107I GTATAC 1 cut(s) 1090
Bst2BI CACGAG 1 cut(s) 240
Bst2UI CCWGG 1 cut(s) 127
Bst4CI ACNGT 1 cut(s) 81
Bst6I CTCTTC 4 cut(s) 159, 276, 929, 1221
BstBI TTCGAA 1 cut(s) 1325
BstDEI CTNAG 6 cut(s) 296, 425, 527, 945, 964, 1197
BstF5I GGATG 1 cut(s) 1207
BstFNI CGCG 3 cut(s) 318, 771, 1248
BstHHI GCGC 1 cut(s) 773
BstKTI GATC 2 cut(s) 205, 941
BstMAI GTCTC 3 cut(s) 156, 508, 819
BstMBI GATC 2 cut(s) 202, 938
BstMWI GCNNNNNNNGC 2 cut(s) 785, 925
BstNI CCWGG 1 cut(s) 127
BstPAI GACNNNNGTC 1 cut(s) 693
BstSCI CCNGG 1 cut(s) 125
BstUI CGCG 3 cut(s) 318, 771, 1248
BstV1I GCAGC 4 cut(s) 325, 478, 785, 915
BstV2I GAAGAC 2 cut(s) 186, 527
BstZ17I GTATAC 1 cut(s) 1090
BsuI GTATCC 1 cut(s) 1006
BsuRI GGCC 1 cut(s) 399
BtsCI GGATG 1 cut(s) 1207
BtsIMutI CAGTG 2 cut(s) 524, 1318
BveI ACCTGC 1 cut(s) 1289
CfoI GCGC 1 cut(s) 773
Cfr10I RCCGGY 1 cut(s) 1185
Cfr13I GGNCC 1 cut(s) 111
CseI GACGC 2 cut(s) 8, 554
Csp6I GTAC 1 cut(s) 854
CviAII CATG 2 cut(s) 1025, 1165
CviQI GTAC 1 cut(s) 854
DdeI CTNAG 6 cut(s) 296, 425, 527, 945, 964, 1197
DpnI GATC 2 cut(s) 204, 940
DpnII GATC 2 cut(s) 202, 938
EaeI YGGCCR 1 cut(s) 397
Eam1104I CTCTTC 4 cut(s) 159, 276, 929, 1221
EarI CTCTTC 4 cut(s) 159, 276, 929, 1221
Eco130I CCWWGG 1 cut(s) 607
Eco24I GRGCYC 1 cut(s) 1265
Eco31I GGTCTC 1 cut(s) 156
Eco47I GGWCC 1 cut(s) 111
Eco57I CTGAAG 2 cut(s) 532, 953
Eco88I CYCGRG 1 cut(s) 1040
EcoRI GAATTC 1 cut(s) 1316
EcoRII CCWGG 1 cut(s) 125
EcoT14I CCWWGG 1 cut(s) 607
EcoT38I GRGCYC 1 cut(s) 1265
ErhI CCWWGG 1 cut(s) 607
FaeI CATG 2 cut(s) 1028, 1168
FaqI GGGAC 2 cut(s) 552, 911
FatI CATG 2 cut(s) 1024, 1164
FauI CCCGC 1 cut(s) 865
FbaI TGATCA 1 cut(s) 202
FblI GTMKAC 1 cut(s) 1089
Fnu4HI GCNGC 5 cut(s) 339, 492, 774, 777, 929
FokI GGATG 1 cut(s) 1214
FriOI GRGCYC 1 cut(s) 1265
Fsp4HI GCNGC 5 cut(s) 339, 492, 774, 777, 929
FspBI CTAG 2 cut(s) 345, 390
GlaI GCGC 1 cut(s) 772
GluI GCNGC 5 cut(s) 339, 492, 774, 777, 929
GsuI CTGGAG 1 cut(s) 620
HaeIII GGCC 1 cut(s) 399
HapII CCGG 1 cut(s) 1186
HgaI GACGC 2 cut(s) 8, 554
HhaI GCGC 1 cut(s) 773
Hin1II CATG 2 cut(s) 1028, 1168
Hin6I GCGC 1 cut(s) 771
HinP1I GCGC 1 cut(s) 771
HincII GTYRAC 1 cut(s) 1282
HindII GTYRAC 1 cut(s) 1282
HinfI GANTC 7 cut(s) 5, 11, 612, 759, 821, 1033, 1095
HpaI GTTAAC 1 cut(s) 1282
HpaII CCGG 1 cut(s) 1186
HphI GGTGA 3 cut(s) 472, 933, 1160
Hpy166II GTNNAC 4 cut(s) 111, 854, 1090, 1282
Hpy188I TCNGA 3 cut(s) 10, 253, 261
Hpy188III TCNNGA 9 cut(s) 23, 662, 722, 796, 818, 896, 1075, 1199, 1347
Hpy8I GTNNAC 4 cut(s) 111, 854, 1090, 1282
HpyAV CCTTC 3 cut(s) 98, 128, 1098
HpyCH4III ACNGT 1 cut(s) 81
HpyCH4V TGCA 9 cut(s) 50, 62, 441, 477, 509, 788, 1127, 1236, 1298
HpyF10VI GCNNNNNNNGC 2 cut(s) 785, 925
HpyF3I CTNAG 6 cut(s) 296, 425, 527, 945, 964, 1197
Hsp92II CATG 2 cut(s) 1028, 1168
HspAI GCGC 1 cut(s) 771
Ksp22I TGATCA 1 cut(s) 202
KspAI GTTAAC 1 cut(s) 1282
Kzo9I GATC 2 cut(s) 202, 938
LmnI GCTCC 1 cut(s) 757
Lsp1109I GCAGC 4 cut(s) 325, 478, 785, 915
LweI GCATC 4 cut(s) 49, 285, 486, 1285
MaeI CTAG 2 cut(s) 345, 390
MaeIII GTNAC 2 cut(s) 551, 613
MalI GATC 2 cut(s) 204, 940
MboI GATC 2 cut(s) 202, 938
MboII GAAGA 9 cut(s) 146, 191, 263, 361, 532, 755, 884, 946, 1238
MhlI GDGCHC 1 cut(s) 1265
MlsI TGGCCA 1 cut(s) 399
MluNI TGGCCA 1 cut(s) 399
MlyI GAGTC 1 cut(s) 621
MmeI TCCRAC 1 cut(s) 519
Mox20I TGGCCA 1 cut(s) 399
MscI TGGCCA 1 cut(s) 399
MseI TTAA 4 cut(s) 804, 992, 1139, 1281
Msp20I TGGCCA 1 cut(s) 399
MspI CCGG 1 cut(s) 1186
MspR9I CCNGG 1 cut(s) 127
MvaI CCWGG 1 cut(s) 127
MvnI CGCG 3 cut(s) 318, 771, 1248
MwoI GCNNNNNNNGC 2 cut(s) 785, 925
NdeII GATC 2 cut(s) 202, 938
NlaIII CATG 2 cut(s) 1028, 1168
NmuCI GTSAC 2 cut(s) 551, 613
NspV TTCGAA 1 cut(s) 1325
PfeI GAWTC 6 cut(s) 5, 11, 759, 821, 1033, 1095
PflMI CCANNNNNTGG 1 cut(s) 132
PfoI TCCNGGA 1 cut(s) 125
PkrI GCNGC 5 cut(s) 340, 493, 775, 778, 930
PleI GAGTC 1 cut(s) 620
PpsI GAGTC 1 cut(s) 620
PshAI GACNNNNGTC 1 cut(s) 693
PshBI ATTAAT 1 cut(s) 992
Psp6I CCWGG 1 cut(s) 125
PspGI CCWGG 1 cut(s) 125
PspPI GGNCC 1 cut(s) 111
RsaI GTAC 1 cut(s) 855
RsaNI GTAC 1 cut(s) 854
SaqAI TTAA 4 cut(s) 804, 992, 1139, 1281
SatI GCNGC 5 cut(s) 339, 492, 774, 777, 929
Sau3AI GATC 2 cut(s) 202, 938
Sau96I GGNCC 1 cut(s) 111
SchI GAGTC 1 cut(s) 621
ScrFI CCNGG 1 cut(s) 127
SduI GDGCHC 1 cut(s) 1265
SfaNI GCATC 4 cut(s) 49, 285, 486, 1285
SfuI TTCGAA 1 cut(s) 1325
SinI GGWCC 1 cut(s) 111
SmlI CTYRAG 2 cut(s) 449, 1073
SmoI CTYRAG 2 cut(s) 449, 1073
SsiI CCGC 4 cut(s) 769, 777, 858, 1108
SspI AATATT 1 cut(s) 577
SspMI CTAG 2 cut(s) 345, 390
StyD4I CCNGG 1 cut(s) 125
StyI CCWWGG 1 cut(s) 607
TaaI ACNGT 1 cut(s) 81
TaqI TCGA 4 cut(s) 697, 721, 1008, 1325
TauI GCSGC 1 cut(s) 779
TfiI GAWTC 6 cut(s) 5, 11, 759, 821, 1033, 1095
Tru1I TTAA 4 cut(s) 804, 992, 1139, 1281
Tru9I TTAA 4 cut(s) 804, 992, 1139, 1281
TscAI CASTG 2 cut(s) 531, 1318
TseFI GTSAC 2 cut(s) 551, 613
TseI GCWGC 4 cut(s) 338, 491, 773, 928
Tsp45I GTSAC 2 cut(s) 551, 613
TspDTI ATGAA 5 cut(s) 227, 762, 1002, 1017, 1041
TspRI CASTG 2 cut(s) 531, 1318
Van91I CCANNNNNTGG 1 cut(s) 132
VpaK11BI GGWCC 1 cut(s) 111
VspI ATTAAT 1 cut(s) 992
XapI RAATTY 4 cut(s) 215, 868, 1241, 1316
XcmI CCANNNNNNNNNTGG 1 cut(s) 1026
XmiI GTMKAC 1 cut(s) 1089
XspI CTAG 2 cut(s) 345, 390
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.