Rh5DG198900

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0000079
Physical Location & Seq
Reverse (-)
22142103 .. 22143661
1559 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG198900.1

Sequence Viewer

Length: 1131 bp
ATGCACTTCTTTCTCACGTACTCTCTTTCCTGCCAACACTGTGGTGCTGTGAGGACCAGCATTTTGTCTGCAAGATGGAGGAACATGTGGACTACTCTTCCCAATCTAGACTTTGATAACGAAAGAGATTCATTTGGTGTCACGATAGGTCCCTATGGCAAGGATCGTTTCACGACGTTTGTTGATCGTGTATTTCTATACCGTGATTCATCTGACATTAAAAAGCTTGGTCTTAAAATCCGTTATCCTGAAGATTTTTCTCGTATCGATGATTGGATCTGCACAGCCGTTAGGCGTAATGTTTTGGAAGTTGATCTTCATGTCTTCTCTGGTGAAATTGAAGAAGAAGTTGGTTTTCAGTTCCCTCAGAGCCTTTTTATGTGCAAAACTCTGAAGGTTTTGAAATTGTATTCAAATTCATGGACTCTTAAGTATCCTCCTCCTCCGCCAGGGTGTTTTCCAAATCTTAAGTTCCTCCATGTTGAATTTGATTTCCTCGATCCGGACACATTGAAAAATCTGTTTTCTCGCTGCCCTATGCTTAAGGAGTTGTCTGTACATGGATTCATTGACTGTGAATATGCTAGGGATTATGATATCTACAAATGTGCGCCTGAATTGAACATGTTGAGAATAGAAGTGTGTGATCCTTATCAGTATTGCTGTTTTTTCACTAATACCCCAAAGCTTGAATACATTGATATTAAATCAGCAGCTCTATCAAGTTATTTCTTAATGAATTCAAACGGCCTAGTCAATGCCAGTATTGTTTTGGAAGAACGTTGTTCTAATAATAATGATAAATACCAACTGTGCCGGTTAGCTGAGTTTTTGTCACAAACAACAAATGTCAATCATCTTTCTCTTGAAATCCATGATTATTGTCTTCAGGCTTGGTATGATTTTGGTAATGTGAACCAAATGAAGCTGGTACTTCATGATTGCTATTACTCGGAAGTACTAGCAGTGCTGCTCACAAAATCACCTAAGCTTGTAGATCTTGCCTTGGAACATAGAATTAAATCTGATGATGAATATTCATTGCCTCAATGGAAGCAACCAGAGTCTGTTCCTGCTTGTTTGCTGAGAAATCTCTGCACCATTACCATAAAGGGATTCAGGGGTCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

376

Amino Acids

43.84

Weight (kDa)

5.84

Isoelectric Point (pI)

36.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 71 - 373 9.6e-10 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 90 - 188 1.2e-09 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 502
AciI CCGC 1 cut(s) 446
AclI AACGTT 1 cut(s) 781
AclWI GGATC 4 cut(s) 171, 284, 494, 641
AcsI RAATTY 3 cut(s) 415, 485, 739
AcuI CTGAAG 3 cut(s) 270, 413, 872
AfaI GTAC 4 cut(s) 20, 558, 933, 960
AfiI CCNNNNNNNGG 2 cut(s) 449, 502
AflII CTTAAG 3 cut(s) 428, 467, 542
AflIII ACRYGT 2 cut(s) 84, 624
AgsI TTSAA 9 cut(s) 341, 403, 414, 485, 514, 622, 692, 744, 869
AjnI CCWGG 1 cut(s) 448
AjuI GAANNNNNNNTTGG 2 cut(s) 333, 365
AleI CACNNNNGTG 1 cut(s) 42
AluBI AGCT 6 cut(s) 226, 688, 716, 824, 928, 991
AluI AGCT 6 cut(s) 226, 688, 716, 824, 928, 991
AlwI GGATC 4 cut(s) 171, 284, 494, 641
AlwNI CAGNNNCTG 1 cut(s) 1067
Aor13HI TCCGGA 1 cut(s) 502
AoxI GGCC 1 cut(s) 748
ApeKI GCWGC 3 cut(s) 531, 713, 970
ApoI RAATTY 3 cut(s) 415, 485, 739
ArsI GACNNNNNNTTYG 2 cut(s) 46, 78
AspLEI GCGC 1 cut(s) 613
AspS9I GGNCC 2 cut(s) 54, 149
AsuHPI GGTGA 2 cut(s) 344, 975
AvaII GGWCC 2 cut(s) 54, 149
BbsI GAAGAC 2 cut(s) 316, 878
BbvI GCAGC 3 cut(s) 518, 725, 957
BccI CCATC 1 cut(s) 69
BceAI ACGGC 2 cut(s) 272, 763
BciT130I CCWGG 1 cut(s) 450
BciVI GTATCC 1 cut(s) 444
BfaI CTAG 4 cut(s) 107, 585, 752, 962
BfrI CTTAAG 3 cut(s) 428, 467, 542
BfuI GTATCC 1 cut(s) 444
BglII AGATCT 1 cut(s) 997
BisI GCNGC 3 cut(s) 532, 714, 971
BlsI GCNGC 3 cut(s) 533, 715, 972
BmcAI AGTACT 1 cut(s) 960
Bme1390I CCNGG 1 cut(s) 450
Bme18I GGWCC 2 cut(s) 54, 149
BmgT120I GGNCC 2 cut(s) 54, 149
BmiI GGNNCC 1 cut(s) 151
BmrFI CCNGG 1 cut(s) 450
BpiI GAAGAC 2 cut(s) 316, 878
Bpu10I CCTNAGC 1 cut(s) 987
Bsa29I ATCGAT 1 cut(s) 267
BsaAI YACGTR 1 cut(s) 18
BsaBI GATNNNNATC 1 cut(s) 651
BsaJI CCNNGG 2 cut(s) 449, 1005
BsaWI WCCGGW 1 cut(s) 502
Bsc4I CCNNNNNNNGG 2 cut(s) 449, 502
Bse118I RCCGGY 1 cut(s) 816
Bse1I ACTGG 1 cut(s) 762
Bse3DI GCAATG 1 cut(s) 1040
Bse8I GATNNNNATC 1 cut(s) 651
BseAI TCCGGA 1 cut(s) 502
BseBI CCWGG 1 cut(s) 450
BseCI ATCGAT 1 cut(s) 267
BseDI CCNNGG 2 cut(s) 449, 1005
BseJI GATNNNNATC 1 cut(s) 651
BseLI CCNNNNNNNGG 2 cut(s) 449, 502
BseMI GCAATG 1 cut(s) 1040
BseMII CTCAG 3 cut(s) 380, 816, 1076
BseNI ACTGG 1 cut(s) 762
BseRI GAGGAG 2 cut(s) 429, 432
BseXI GCAGC 3 cut(s) 518, 725, 957
BsgI GTGCAG 2 cut(s) 265, 1081
BshFI GGCC 1 cut(s) 750
BshVI ATCGAT 1 cut(s) 267
BsiSI CCGG 2 cut(s) 503, 817
BslFI GGGAC 1 cut(s) 135
BslI CCNNNNNNNGG 2 cut(s) 449, 502
BsmFI GGGAC 1 cut(s) 135
BsnI GGCC 1 cut(s) 750
Bsp13I TCCGGA 1 cut(s) 502
Bsp1407I TGTACA 1 cut(s) 556
Bsp143I GATC 7 cut(s) 163, 184, 276, 313, 499, 646, 997
BspACI CCGC 1 cut(s) 446
BspANI GGCC 1 cut(s) 750
BspCNI CTCAG 3 cut(s) 379, 817, 1077
BspDI ATCGAT 1 cut(s) 267
BspEI TCCGGA 1 cut(s) 502
BspHI TCATGA 1 cut(s) 937
BspLI GGNNCC 1 cut(s) 151
BspPI GGATC 4 cut(s) 171, 284, 494, 641
BspTI CTTAAG 3 cut(s) 428, 467, 542
BsrDI GCAATG 1 cut(s) 1040
BsrFI RCCGGY 1 cut(s) 816
BsrGI TGTACA 1 cut(s) 556
BsrI ACTGG 1 cut(s) 762
BssAI RCCGGY 1 cut(s) 816
BssECI CCNNGG 2 cut(s) 449, 1005
BssMI GATC 7 cut(s) 163, 184, 276, 313, 499, 646, 997
BssT1I CCWWGG 1 cut(s) 1005
Bst2UI CCWGG 1 cut(s) 450
Bst4CI ACNGT 4 cut(s) 41, 203, 575, 813
Bst6I CTCTTC 1 cut(s) 102
BstAFI CTTAAG 3 cut(s) 428, 467, 542
BstAUI TGTACA 1 cut(s) 556
BstBAI YACGTR 1 cut(s) 18
BstDEI CTNAG 4 cut(s) 366, 825, 987, 1085
BstENI CCTNNNNNAGG 1 cut(s) 447
BstHHI GCGC 1 cut(s) 613
BstKTI GATC 7 cut(s) 166, 187, 279, 316, 502, 649, 1000
BstMBI GATC 7 cut(s) 163, 184, 276, 313, 499, 646, 997
BstNI CCWGG 1 cut(s) 450
BstNSI RCATGY 2 cut(s) 88, 628
BstSCI CCNGG 1 cut(s) 448
BstV1I GCAGC 3 cut(s) 518, 725, 957
BstV2I GAAGAC 2 cut(s) 316, 878
BstX2I RGATCY 2 cut(s) 276, 997
BstXI CCANNNNNNTGG 1 cut(s) 41
BstYI RGATCY 2 cut(s) 276, 997
Bsu15I ATCGAT 1 cut(s) 267
BsuI GTATCC 1 cut(s) 444
BsuRI GGCC 1 cut(s) 750
BsuTUI ATCGAT 1 cut(s) 267
BtsI GCAGTG 1 cut(s) 972
BtsIMutI CAGTG 2 cut(s) 37, 972
CaiI CAGNNNCTG 1 cut(s) 1067
CciI TCATGA 1 cut(s) 937
CfoI GCGC 1 cut(s) 613
Cfr10I RCCGGY 1 cut(s) 816
Cfr13I GGNCC 2 cut(s) 54, 149
ClaI ATCGAT 1 cut(s) 267
Csp6I GTAC 4 cut(s) 19, 557, 932, 959
CviAII CATG 8 cut(s) 85, 320, 420, 479, 560, 625, 875, 938
CviQI GTAC 4 cut(s) 19, 557, 932, 959
DdeI CTNAG 4 cut(s) 366, 825, 987, 1085
DpnI GATC 7 cut(s) 165, 186, 278, 315, 501, 648, 999
DpnII GATC 7 cut(s) 163, 184, 276, 313, 499, 646, 997
Eam1104I CTCTTC 1 cut(s) 102
EarI CTCTTC 1 cut(s) 102
EciI GGCGGA 1 cut(s) 435
Eco130I CCWWGG 1 cut(s) 1005
Eco32I GATATC 1 cut(s) 598
Eco47I GGWCC 2 cut(s) 54, 149
Eco57I CTGAAG 3 cut(s) 270, 413, 872
EcoNI CCTNNNNNAGG 1 cut(s) 447
EcoO109I RGGNCCY 1 cut(s) 149
EcoRI GAATTC 1 cut(s) 739
EcoRII CCWGG 1 cut(s) 448
EcoRV GATATC 1 cut(s) 598
EcoT14I CCWWGG 1 cut(s) 1005
ErhI CCWWGG 1 cut(s) 1005
FaeI CATG 8 cut(s) 88, 323, 423, 482, 563, 628, 878, 941
FalI AAGNNNNNCTT 2 cut(s) 300, 332
FaqI GGGAC 1 cut(s) 135
FatI CATG 8 cut(s) 84, 319, 419, 478, 559, 624, 874, 937
Fnu4HI GCNGC 3 cut(s) 532, 714, 971
Fsp4HI GCNGC 3 cut(s) 532, 714, 971
FspBI CTAG 4 cut(s) 107, 585, 752, 962
GlaI GCGC 1 cut(s) 612
GluI GCNGC 3 cut(s) 532, 714, 971
HaeIII GGCC 1 cut(s) 750
HapII CCGG 2 cut(s) 503, 817
HhaI GCGC 1 cut(s) 613
Hin1II CATG 8 cut(s) 88, 323, 423, 482, 563, 628, 878, 941
Hin6I GCGC 1 cut(s) 611
HinP1I GCGC 1 cut(s) 611
HindIII AAGCTT 3 cut(s) 224, 686, 989
HinfI GANTC 6 cut(s) 128, 206, 424, 564, 1064, 1116
HpaII CCGG 2 cut(s) 503, 817
HphI GGTGA 2 cut(s) 344, 975
Hpy166II GTNNAC 2 cut(s) 90, 916
Hpy188I TCNGA 5 cut(s) 214, 369, 393, 955, 1027
Hpy188III TCNNGA 7 cut(s) 107, 142, 172, 248, 503, 866, 938
Hpy8I GTNNAC 2 cut(s) 90, 916
Hpy99I CGWCG 1 cut(s) 178
HpyAV CCTTC 1 cut(s) 388
HpyCH4III ACNGT 4 cut(s) 41, 203, 575, 813
HpyCH4IV ACGT 3 cut(s) 17, 176, 781
HpyCH4V TGCA 5 cut(s) 4, 71, 282, 384, 1098
HpyF3I CTNAG 4 cut(s) 366, 825, 987, 1085
HpySE526I ACGT 3 cut(s) 17, 176, 781
Hsp92II CATG 8 cut(s) 88, 323, 423, 482, 563, 628, 878, 941
HspAI GCGC 1 cut(s) 611
Kpn2I TCCGGA 1 cut(s) 502
Kzo9I GATC 7 cut(s) 163, 184, 276, 313, 499, 646, 997
Lsp1109I GCAGC 3 cut(s) 518, 725, 957
MaeI CTAG 4 cut(s) 107, 585, 752, 962
MaeII ACGT 3 cut(s) 17, 176, 781
MaeIII GTNAC 2 cut(s) 139, 834
MalI GATC 7 cut(s) 165, 186, 278, 315, 501, 648, 999
MboI GATC 7 cut(s) 163, 184, 276, 313, 499, 646, 997
MboII GAAGA 8 cut(s) 89, 263, 308, 316, 353, 356, 788, 878
MflI RGATCY 2 cut(s) 276, 997
MluCI AATT 7 cut(s) 336, 404, 415, 485, 617, 739, 1017
MlyI GAGTC 2 cut(s) 418, 1073
MnlI CCTC 9 cut(s) 45, 72, 375, 447, 450, 453, 485, 506, 1056
MroI TCCGGA 1 cut(s) 502
MseI TTAA 8 cut(s) 219, 234, 429, 468, 543, 705, 734, 1020
MslI CAYNNNNRTG 1 cut(s) 42
MspCI CTTAAG 3 cut(s) 428, 467, 542
MspI CCGG 2 cut(s) 503, 817
MspR9I CCNGG 1 cut(s) 450
MvaI CCWGG 1 cut(s) 450
NdeII GATC 7 cut(s) 163, 184, 276, 313, 499, 646, 997
NlaIII CATG 8 cut(s) 88, 323, 423, 482, 563, 628, 878, 941
NlaIV GGNNCC 1 cut(s) 151
NmuCI GTSAC 2 cut(s) 139, 834
NspI RCATGY 2 cut(s) 88, 628
OliI CACNNNNGTG 1 cut(s) 42
PagI TCATGA 1 cut(s) 937
PciI ACATGT 2 cut(s) 84, 624
PfeI GAWTC 4 cut(s) 128, 206, 564, 1116
PkrI GCNGC 3 cut(s) 533, 715, 972
PleI GAGTC 2 cut(s) 418, 1072
PpsI GAGTC 2 cut(s) 418, 1072
Ppu21I YACGTR 1 cut(s) 18
PpuMI RGGWCCY 1 cut(s) 149
PscI ACATGT 2 cut(s) 84, 624
Psp1406I AACGTT 1 cut(s) 781
Psp5II RGGWCCY 1 cut(s) 149
Psp6I CCWGG 1 cut(s) 448
PspGI CCWGG 1 cut(s) 448
PspN4I GGNNCC 1 cut(s) 151
PspPI GGNCC 2 cut(s) 54, 149
PspPPI RGGWCCY 1 cut(s) 149
PstNI CAGNNNCTG 1 cut(s) 1067
PsuI RGATCY 2 cut(s) 276, 997
RsaI GTAC 4 cut(s) 20, 558, 933, 960
RsaNI GTAC 4 cut(s) 19, 557, 932, 959
RseI CAYNNNNRTG 1 cut(s) 42
SaqAI TTAA 8 cut(s) 219, 234, 429, 468, 543, 705, 734, 1020
SatI GCNGC 3 cut(s) 532, 714, 971
Sau3AI GATC 7 cut(s) 163, 184, 276, 313, 499, 646, 997
Sau96I GGNCC 2 cut(s) 54, 149
ScaI AGTACT 1 cut(s) 960
SchI GAGTC 2 cut(s) 418, 1073
ScrFI CCNGG 1 cut(s) 450
SinI GGWCC 2 cut(s) 54, 149
SmiMI CAYNNNNRTG 1 cut(s) 42
SmlI CTYRAG 3 cut(s) 428, 467, 542
SmoI CTYRAG 3 cut(s) 428, 467, 542
Sse9I AATT 7 cut(s) 336, 404, 415, 485, 617, 739, 1017
SsiI CCGC 1 cut(s) 446
SspI AATATT 1 cut(s) 1037
SspMI CTAG 4 cut(s) 107, 585, 752, 962
StyD4I CCNGG 1 cut(s) 448
StyI CCWWGG 1 cut(s) 1005
TaaI ACNGT 4 cut(s) 41, 203, 575, 813
TaiI ACGT 3 cut(s) 20, 179, 784
TaqI TCGA 2 cut(s) 267, 498
TasI AATT 7 cut(s) 336, 404, 415, 485, 617, 739, 1017
TatI WGTACW 2 cut(s) 556, 958
TfiI GAWTC 4 cut(s) 128, 206, 564, 1116
Tru1I TTAA 8 cut(s) 219, 234, 429, 468, 543, 705, 734, 1020
Tru9I TTAA 8 cut(s) 219, 234, 429, 468, 543, 705, 734, 1020
TscAI CASTG 2 cut(s) 44, 972
TseFI GTSAC 2 cut(s) 139, 834
TseI GCWGC 3 cut(s) 531, 713, 970
Tsp45I GTSAC 2 cut(s) 139, 834
TspGWI ACGGA 1 cut(s) 230
TspRI CASTG 2 cut(s) 44, 972
Vha464I CTTAAG 3 cut(s) 428, 467, 542
VpaK11BI GGWCC 2 cut(s) 54, 149
XagI CCTNNNNNAGG 1 cut(s) 447
XapI RAATTY 3 cut(s) 415, 485, 739
XbaI TCTAGA 1 cut(s) 106
XceI RCATGY 2 cut(s) 88, 628
XcmI CCANNNNNNNNNTGG 1 cut(s) 769
XspI CTAG 4 cut(s) 107, 585, 752, 962
ZrmI AGTACT 1 cut(s) 960
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.