RLG00000033234

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0000079
Physical Location & Seq
Reverse (-)
24700002 .. 24705621
5620 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000033234

Sequence Viewer

Length: 1389 bp
ATGGCCTCTCCCGAATCAGAGAACGCAGCCGACCACCGCCAGACCTTCACTGCACCTAGACCCCGCCGGACCTTCACTACGCCCAGACCGCTATTGGATCAGAACACGATCCCAGATCTCCGGCCAGAGCAGTTGACTCAGACTCCGGTTGAAATCGAGCTACATCACCGGTCAAACTCAGTCTCAAAACGGCACCGCCTCGAATCGACTCACATCATCAACGTCGCGTATCCTCCAGTGCTCGATCTCCGGTGCTCGACGCAGGTTGTGGCAGAGAAAAAAGATGATTGGGTGCCCAAAGCATCTTCCTCGAGCATTCCTTCGTCTGAAACTCCGTCAGAGTCGCCGGCGATGTTCTCATCGAGCAGTAGCCCACCAAGTCCGACGCCGGCAGGTTTGTCGCCTGAGGGTGCTTTGGAGTACGGATCTATGTTTTCAGTTAATGACTCATTCTCACCCTTCTCTTTGAAGCCGACCCATTTCCATTCTTCTTCCTCTGGTTCTCAGCCCCGCATCAGTGATGAAAGAGAATTCGACCCAGAGCGTTTTGTGGCCTTTGTGGACCGTGCACTTTTCCTCCGTGGCTCCTCAAGCATTCATAGAATCTCTATTAGATGTATTGATACGGAGAATTATCCTCATCTGGATGAGTGGATTTGCACTGCAATTAGGGCTAATGTTGTCGAACTTGAACTTGATCTTCATGAGTTTGATTTTCGATATGAGCCTTTTGAGTTGCCTAGAAGCCTTTTCACGTCCAGGAGTTTGGTGGTTTTGAAGCTGACGCTTAATGAGAATTATGTTGCAATTCCTCCCAGCTCAGATTGTTTTCCTTGTCTCAAGCTTCTTGATGTTTCAGTCTTTTATCCTGATCCTGCCACAATGGAGAGTCTCTTTACTTGTGCTCCTGTACTTGAACACTTGATCATAGAGGGATATCTTGGTGAGGAACAATATTTGAATTTCAACATCTTTGCACCCAAACTAAAAAGACTGGAACTGAGATTTGATCCATTGGATGAAGTTGATTCTGTGTCCAACATTTTGTTTAATGTCAATGCTCCTAAGCTTGAAAGGTTAGATCTGAATGAGAACTTTTTGGCGAGCTATTGTCTGAGTGAAAATGCCAGGTCGGTAGTTGCAACGGCAAAGATTAAGTCGGTGGAGGAGGGCAGATCCCAAACTACTACTTCTTCATTGGACCATCTGCACATGACTACTGATTCCAAAGAGTTGCAGAATTTTGAGGTGGGATTTTTCTGGGTCGGATCTGAGAGCTTATGGGGGTTGCGAAAATCGACATCGTTGAAGCCTGAAGACTCGGAGGGTGGGAGAGAGGTAGAGAGGCCGAGGGAGGAAGCGAAGGAGACTATGTCAGTCTTGAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

463

Amino Acids

52.13

Weight (kDa)

5.12

Isoelectric Point (pI)

60.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At5g56370 PF24758 215 - 370 7.8e-13 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 253, 383
AccB1I GGYRCC 2 cut(s) 192, 292
AccII CGCG 1 cut(s) 227
AciI CCGC 5 cut(s) 37, 64, 89, 196, 511
AclWI GGATC 7 cut(s) 103, 105, 433, 866, 1004, 1170, 1276
AcoI YGGCCR 1 cut(s) 122
AcsI RAATTY 3 cut(s) 530, 961, 1240
AcuI CTGAAG 1 cut(s) 1335
AcyI GRCGYC 1 cut(s) 386
AfaI GTAC 2 cut(s) 422, 912
AgeI ACCGGT 1 cut(s) 168
AgsI TTSAA 9 cut(s) 152, 469, 692, 778, 917, 961, 967, 1073, 1309
AjiI CACGTC 1 cut(s) 756
AjnI CCWGG 2 cut(s) 758, 1127
AluBI AGCT 7 cut(s) 160, 781, 819, 844, 1069, 1107, 1278
AluI AGCT 7 cut(s) 160, 781, 819, 844, 1069, 1107, 1278
Alw21I GWGCWC 4 cut(s) 243, 257, 571, 907
Alw26I GTCTC 4 cut(s) 187, 842, 896, 1361
Alw44I GTGCAC 1 cut(s) 567
AlwI GGATC 7 cut(s) 103, 105, 433, 866, 1004, 1170, 1276
Ama87I CYCGRG 1 cut(s) 310
AoxI GGCC 4 cut(s) 3, 122, 552, 1346
ApaLI GTGCAC 1 cut(s) 567
ApeKI GCWGC 1 cut(s) 26
ApoI RAATTY 3 cut(s) 530, 961, 1240
ArsI GACNNNNNNTTYG 2 cut(s) 1142, 1174
AsiGI ACCGGT 1 cut(s) 168
AspS9I GGNCC 3 cut(s) 69, 562, 1201
AsuHPI GGTGA 3 cut(s) 158, 447, 956
AvaI CYCGRG 1 cut(s) 310
AvaII GGWCC 3 cut(s) 69, 562, 1201
AxyI CCTNAGG 1 cut(s) 405
BaeGI GKGCMC 2 cut(s) 297, 571
BanI GGYRCC 2 cut(s) 192, 292
BbsI GAAGAC 1 cut(s) 1323
Bbv12I GWGCWC 4 cut(s) 243, 257, 571, 907
BbvI GCAGC 1 cut(s) 38
BccI CCATC 1 cut(s) 1212
BceAI ACGGC 2 cut(s) 206, 1161
BcgI CGANNNNNNTGC 4 cut(s) 291, 325, 381, 415
BciT130I CCWGG 2 cut(s) 760, 1129
BciVI GTATCC 1 cut(s) 240
BclI TGATCA 1 cut(s) 924
BcoDI GTCTC 4 cut(s) 187, 842, 896, 1361
BfaI CTAG 2 cut(s) 57, 741
BfuAI ACCTGC 2 cut(s) 253, 383
BfuI GTATCC 1 cut(s) 240
BglII AGATCT 2 cut(s) 115, 1081
BisI GCNGC 1 cut(s) 27
BlsI GCNGC 1 cut(s) 28
Bme1390I CCNGG 2 cut(s) 760, 1129
Bme18I GGWCC 3 cut(s) 69, 562, 1201
BmeT110I CYCGRG 1 cut(s) 310
BmgBI CACGTC 1 cut(s) 756
BmgT120I GGNCC 3 cut(s) 69, 562, 1201
BmiI GGNNCC 3 cut(s) 194, 294, 586
BmrFI CCNGG 2 cut(s) 760, 1129
BmsI GCATC 2 cut(s) 311, 522
BpiI GAAGAC 1 cut(s) 1323
BpmI CTGGAG 1 cut(s) 219
Bpu10I CCTNAGC 1 cut(s) 1065
BpuEI CTTGAG 2 cut(s) 574, 824
BsaHI GRCGYC 1 cut(s) 386
BsaJI CCNNGG 2 cut(s) 580, 1349
BsaWI WCCGGW 3 cut(s) 145, 168, 249
BsaXI ACNNNNNCTCC 8 cut(s) 127, 157, 561, 591, 889, 919, 1358, 1388
Bse118I RCCGGY 3 cut(s) 168, 346, 388
Bse1I ACTGG 2 cut(s) 236, 999
Bse21I CCTNAGG 1 cut(s) 405
BseBI CCWGG 2 cut(s) 760, 1129
BseDI CCNNGG 2 cut(s) 580, 1349
BseGI GGATG 2 cut(s) 652, 1024
BseMII CTCAG 8 cut(s) 152, 192, 396, 518, 834, 992, 1106, 1263
BseNI ACTGG 2 cut(s) 236, 999
BseRI GAGGAG 2 cut(s) 577, 1181
BseSI GKGCMC 2 cut(s) 297, 571
BseXI GCAGC 1 cut(s) 38
BseYI CCCAGC 1 cut(s) 815
BsgI GTGCAG 2 cut(s) 36, 1193
Bsh1236I CGCG 1 cut(s) 227
BshFI GGCC 4 cut(s) 5, 124, 554, 1348
BshNI GGYRCC 2 cut(s) 192, 292
BshTI ACCGGT 1 cut(s) 168
BsiHKAI GWGCWC 4 cut(s) 243, 257, 571, 907
BsiHKCI CYCGRG 1 cut(s) 310
BsiSI CCGG 7 cut(s) 67, 121, 146, 169, 250, 347, 389
BsmAI GTCTC 4 cut(s) 187, 842, 896, 1361
BsmI GAATGC 2 cut(s) 315, 594
BsnI GGCC 4 cut(s) 5, 124, 554, 1348
BsoBI CYCGRG 1 cut(s) 310
Bsp1286I GDGCHC 5 cut(s) 243, 257, 297, 571, 907
BspACI CCGC 5 cut(s) 37, 64, 89, 196, 511
BspANI GGCC 4 cut(s) 5, 124, 554, 1348
BspCNI CTCAG 8 cut(s) 151, 191, 397, 517, 833, 993, 1107, 1264
BspFNI CGCG 1 cut(s) 227
BspHI TCATGA 1 cut(s) 703
BspLI GGNNCC 3 cut(s) 194, 294, 586
BspMI ACCTGC 2 cut(s) 253, 383
BspPI GGATC 7 cut(s) 103, 105, 433, 866, 1004, 1170, 1276
BspT107I GGYRCC 2 cut(s) 192, 292
BsrFI RCCGGY 3 cut(s) 168, 346, 388
BsrI ACTGG 2 cut(s) 236, 999
BssAI RCCGGY 3 cut(s) 168, 346, 388
BssECI CCNNGG 2 cut(s) 580, 1349
BssNI GRCGYC 1 cut(s) 386
Bst2UI CCWGG 2 cut(s) 760, 1129
Bst4CI ACNGT 1 cut(s) 566
BstACI GRCGYC 1 cut(s) 386
BstC8I GCNNGC 3 cut(s) 348, 390, 1105
BstDEI CTNAG 9 cut(s) 138, 178, 405, 504, 820, 1001, 1065, 1115, 1272
BstDSI CCRYGG 1 cut(s) 580
BstF5I GGATG 2 cut(s) 652, 1024
BstFNI CGCG 1 cut(s) 227
BstMAI GTCTC 4 cut(s) 187, 842, 896, 1361
BstMWI GCNNNNNNNGC 3 cut(s) 88, 591, 671
BstNI CCWGG 2 cut(s) 760, 1129
BstSCI CCNGG 2 cut(s) 758, 1127
BstSLI GKGCMC 2 cut(s) 297, 571
BstUI CGCG 1 cut(s) 227
BstV1I GCAGC 1 cut(s) 38
BstV2I GAAGAC 1 cut(s) 1323
BstX2I RGATCY 5 cut(s) 115, 425, 1081, 1175, 1268
BstXI CCANNNNNNTGG 1 cut(s) 766
BstYI RGATCY 5 cut(s) 115, 425, 1081, 1175, 1268
Bsu36I CCTNAGG 1 cut(s) 405
BsuI GTATCC 1 cut(s) 240
BsuRI GGCC 4 cut(s) 5, 124, 554, 1348
BtgI CCRYGG 1 cut(s) 580
BtgZI GCGATG 1 cut(s) 365
BtrI CACGTC 1 cut(s) 756
BtsCI GGATG 2 cut(s) 652, 1024
BtsI GCAGTG 2 cut(s) 48, 660
BtsIMutI CAGTG 4 cut(s) 48, 243, 523, 660
BveI ACCTGC 2 cut(s) 253, 383
Cac8I GCNNGC 3 cut(s) 348, 390, 1105
CciI TCATGA 1 cut(s) 703
Cfr10I RCCGGY 3 cut(s) 168, 346, 388
Cfr13I GGNCC 3 cut(s) 69, 562, 1201
CseI GACGC 3 cut(s) 268, 394, 793
Csp6I GTAC 2 cut(s) 421, 911
CspAI ACCGGT 1 cut(s) 168
CviAII CATG 2 cut(s) 704, 1213
CviQI GTAC 2 cut(s) 421, 911
DdeI CTNAG 9 cut(s) 138, 178, 405, 504, 820, 1001, 1065, 1115, 1272
EaeI YGGCCR 1 cut(s) 122
Eco32I GATATC 1 cut(s) 938
Eco47I GGWCC 3 cut(s) 69, 562, 1201
Eco57I CTGAAG 1 cut(s) 1335
Eco81I CCTNAGG 1 cut(s) 405
Eco88I CYCGRG 1 cut(s) 310
EcoRI GAATTC 1 cut(s) 530
EcoRII CCWGG 2 cut(s) 758, 1127
EcoRV GATATC 1 cut(s) 938
FaeI CATG 2 cut(s) 707, 1216
FaiI YATR 9 cut(s) 431, 600, 705, 723, 801, 929, 1214, 1282, 1373
FatI CATG 2 cut(s) 703, 1212
FauI CCCGC 2 cut(s) 71, 518
FbaI TGATCA 1 cut(s) 924
Fnu4HI GCNGC 1 cut(s) 27
FokI GGATG 2 cut(s) 659, 1031
Fsp4HI GCNGC 1 cut(s) 27
FspBI CTAG 2 cut(s) 57, 741
GluI GCNGC 1 cut(s) 27
GsaI CCCAGC 1 cut(s) 819
GsuI CTGGAG 1 cut(s) 219
HaeIII GGCC 4 cut(s) 5, 124, 554, 1348
HapII CCGG 7 cut(s) 67, 121, 146, 169, 250, 347, 389
HgaI GACGC 3 cut(s) 268, 394, 793
Hin1I GRCGYC 1 cut(s) 386
Hin1II CATG 2 cut(s) 707, 1216
HincII GTYRAC 1 cut(s) 135
HindII GTYRAC 1 cut(s) 135
HindIII AAGCTT 2 cut(s) 842, 1067
HpaII CCGG 7 cut(s) 67, 121, 146, 169, 250, 347, 389
HphI GGTGA 3 cut(s) 158, 447, 956
Hpy166II GTNNAC 3 cut(s) 135, 562, 569
Hpy188III TCNNGA 6 cut(s) 11, 644, 704, 848, 869, 1381
Hpy8I GTNNAC 3 cut(s) 135, 562, 569
Hpy99I CGWCG 3 cut(s) 227, 262, 388
HpyAV CCTTC 5 cut(s) 55, 82, 330, 469, 1357
HpyCH4III ACNGT 1 cut(s) 566
HpyCH4IV ACGT 2 cut(s) 222, 755
HpyCH4V TGCA 9 cut(s) 53, 569, 660, 665, 806, 977, 1142, 1210, 1237
HpyF10VI GCNNNNNNNGC 3 cut(s) 88, 591, 671
HpyF3I CTNAG 9 cut(s) 138, 178, 405, 504, 820, 1001, 1065, 1115, 1272
HpySE526I ACGT 2 cut(s) 222, 755
Hsp92I GRCGYC 1 cut(s) 386
Hsp92II CATG 2 cut(s) 707, 1216
KroI GCCGGC 2 cut(s) 346, 388
KroNI GCCGGC 2 cut(s) 348, 390
Ksp22I TGATCA 1 cut(s) 924
LmnI GCTCC 3 cut(s) 590, 910, 1066
Lsp1109I GCAGC 1 cut(s) 38
LweI GCATC 2 cut(s) 311, 522
MaeI CTAG 2 cut(s) 57, 741
MaeII ACGT 2 cut(s) 222, 755
MboII GAAGA 6 cut(s) 297, 480, 483, 692, 1185, 1328
MflI RGATCY 5 cut(s) 115, 425, 1081, 1175, 1268
MhlI GDGCHC 5 cut(s) 243, 257, 297, 571, 907
MluCI AATT 7 cut(s) 530, 631, 666, 796, 807, 961, 1240
MlyI GAGTC 7 cut(s) 130, 136, 202, 350, 440, 898, 1313
MmeI TCCRAC 3 cut(s) 407, 1062, 1246
MreI CGCCGGCG 1 cut(s) 346
MroNI GCCGGC 2 cut(s) 346, 388
MseI TTAA 4 cut(s) 441, 789, 1050, 1155
MslI CAYNNNNRTG 1 cut(s) 645
MspI CCGG 7 cut(s) 67, 121, 146, 169, 250, 347, 389
MspR9I CCNGG 2 cut(s) 760, 1129
Mva1269I GAATGC 2 cut(s) 315, 594
MvaI CCWGG 2 cut(s) 760, 1129
MvnI CGCG 1 cut(s) 227
MwoI GCNNNNNNNGC 3 cut(s) 88, 591, 671
NaeI GCCGGC 2 cut(s) 348, 390
NgoMIV GCCGGC 2 cut(s) 346, 388
NlaIII CATG 2 cut(s) 707, 1216
NlaIV GGNNCC 3 cut(s) 194, 294, 586
NmeAIII GCCGAG 1 cut(s) 1374
PaeR7I CTCGAG 1 cut(s) 310
PagI TCATGA 1 cut(s) 703
PctI GAATGC 2 cut(s) 315, 594
PdiI GCCGGC 2 cut(s) 348, 390
PfeI GAWTC 5 cut(s) 14, 203, 603, 1028, 1223
PflFI GACNNNGTC 1 cut(s) 1372
PfoI TCCNGGA 1 cut(s) 758
PinAI ACCGGT 1 cut(s) 168
PkrI GCNGC 1 cut(s) 28
PleI GAGTC 7 cut(s) 130, 136, 202, 349, 440, 897, 1313
PpsI GAGTC 7 cut(s) 130, 136, 202, 349, 440, 897, 1313
Psp6I CCWGG 2 cut(s) 758, 1127
PspFI CCCAGC 1 cut(s) 815
PspGI CCWGG 2 cut(s) 758, 1127
PspN4I GGNNCC 3 cut(s) 194, 294, 586
PspPI GGNCC 3 cut(s) 69, 562, 1201
PspXI VCTCGAGB 1 cut(s) 310
PsuI RGATCY 5 cut(s) 115, 425, 1081, 1175, 1268
PsyI GACNNNGTC 1 cut(s) 1372
RsaI GTAC 2 cut(s) 422, 912
RsaNI GTAC 2 cut(s) 421, 911
RseI CAYNNNNRTG 1 cut(s) 645
SaqAI TTAA 4 cut(s) 441, 789, 1050, 1155
SatI GCNGC 1 cut(s) 27
Sau96I GGNCC 3 cut(s) 69, 562, 1201
SchI GAGTC 7 cut(s) 130, 136, 202, 350, 440, 898, 1313
ScrFI CCNGG 2 cut(s) 760, 1129
SduI GDGCHC 5 cut(s) 243, 257, 297, 571, 907
SfaNI GCATC 2 cut(s) 311, 522
Sfr274I CTCGAG 1 cut(s) 310
SgrAI CRCCGGYG 1 cut(s) 346
SinI GGWCC 3 cut(s) 69, 562, 1201
SlaI CTCGAG 1 cut(s) 310
SmiMI CAYNNNNRTG 1 cut(s) 645
SmlI CTYRAG 4 cut(s) 310, 589, 839, 1381
SmoI CTYRAG 4 cut(s) 310, 589, 839, 1381
Sse9I AATT 7 cut(s) 530, 631, 666, 796, 807, 961, 1240
SsiI CCGC 5 cut(s) 37, 64, 89, 196, 511
SspI AATATT 1 cut(s) 956
SspMI CTAG 2 cut(s) 57, 741
StyD4I CCNGG 2 cut(s) 758, 1127
TaaI ACNGT 1 cut(s) 566
TaiI ACGT 2 cut(s) 225, 758
TasI AATT 7 cut(s) 530, 631, 666, 796, 807, 961, 1240
TatI WGTACW 1 cut(s) 910
TfiI GAWTC 5 cut(s) 14, 203, 603, 1028, 1223
Tru1I TTAA 4 cut(s) 441, 789, 1050, 1155
Tru9I TTAA 4 cut(s) 441, 789, 1050, 1155
TscAI CASTG 4 cut(s) 55, 243, 523, 667
TseI GCWGC 1 cut(s) 26
TspDTI ATGAA 5 cut(s) 537, 587, 692, 1035, 1185
TspGWI ACGGA 4 cut(s) 324, 438, 569, 641
TspRI CASTG 4 cut(s) 55, 243, 523, 667
Tth111I GACNNNGTC 1 cut(s) 1372
VneI GTGCAC 1 cut(s) 567
VpaK11BI GGWCC 3 cut(s) 69, 562, 1201
XapI RAATTY 3 cut(s) 530, 961, 1240
XcmI CCANNNNNNNNNTGG 2 cut(s) 91, 766
XhoI CTCGAG 1 cut(s) 310
XspI CTAG 2 cut(s) 57, 741
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.