Rh5AG198600

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0000079
Physical Location & Seq
Reverse (-)
23412710 .. 23414480
1771 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG198600.1

Sequence Viewer

Length: 1353 bp
ATGGTTTCAATGTCAAAGCCTCAAGCAAGAGTGAGAGATAGGATAAGTGCATTACCAGATGCACTTCTTTCTCACATACTCTCTTTCCTCCCAACACTTTGTGCTGTGAGGACCAGCATTTTGTCTGCAAGATGGAGGAACATGTGGACTACTCTTCCCAATCTAGACTTTGATAACGAAAGAGATTCATTTGGTGTCACGATAGGTCCCTATGGCAAGGATCGTTTCACGACGTTTGTTGATCGTGTATTTGTTTACCGTGATTCATCCGACATTAAAAAGCTTGGTCTTAAAATTCGTTATCCTGTAGATTTTTCTCGTATCGATGATTGGATCTGCACAGCCGTTAGGCGTAATGTTTTGGAAGTTGATCTTCATGTCTTCTCTGATGAAATTGAAGGAGAGGGTTTTCAGTTCCCTCGGAGCCTTTTTATGTGCAAAACTCTGAAGGTTTTGAAATTGTATTCAAATTCATGGACTATTAAGTATCCTCCTCCTCCGCCAGGGTGTTTTCCAAATCTTAAGTTCCTCCATGTTGAAATTGATTTCCCCGATCCAGACTCACTGAAAAATCTGTTTACTCGCTGCCCTATGCTTGAGGAGTTGTCTATACATGGATTCAGTGATTGTGCTAGGGTTTATGATATCTATGTATGTGCGCCTGAATTGAAGATGTTGAGAATGAAAGTGTCTGATCCTTATAAGAACTGCTATTTTGTCAATAATGCCCCAAAGCTTGAATACATTGATATCAAGTCAGCTGCTGTATCAAATTATTATTTAAAGAATTCAAACGGCCTATTCAATGCCAGTATTGTTTTTGAAGAACATTTTTCTAATTATAAAGATGAATACCAACTGTGCCAATTAGCTGAGCTGTTGTCACAGAGAACAAATGTCAATCATCTTTCTCTTGAAATCCATGATCATTGTCTTCAGGCTTGGTATCATCCTTTTGATTTTGGTAATGTGAACCAAATGAAGCTGGTACTTCATGATTGCTATTACTGGGAAGTACTAGCAGTGCTGCTCACAAAATCACCTAAACTTGTAGATCTTGCCTTGGAACATAGAATTAAATCTCATGATGAATATTCATTGCCACAATGGAAGCAACCAGAGTCTGTTCCTGCTTGTTTGCTGAGAAATCTCAGCACCATTACCATAAAGGGATTCAGGGGTCATCAGGTTGAGATGGATGTAGCACAGTACATGTTAAAGAATGGTCACGTTTTGAATAACATGAAAATCTATACAGGCCATCTGTGTAAGAAAGAGAAGGAGTTATACAAGAAATTTTTGATGTTTGAAAGGCGTTCAATGACTTGTAAAGTTGAATTTATCAAGATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

450

Amino Acids

52.61

Weight (kDa)

8.4

Isoelectric Point (pI)

32.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 15 - 54 2.2e-06 F-box domain
LRR_At1g61320_AtMIF1 PF23622 90 - 425 9.4e-16 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 109 - 251 3.9e-11 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 372 - 417 5.9e-13 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 702, 843
AciI CCGC 1 cut(s) 500
AclWI GGATC 4 cut(s) 228, 341, 548, 689
AcsI RAATTY 5 cut(s) 294, 469, 787, 1295, 1337
AcuI CTGAAG 2 cut(s) 467, 920
AdeI CACNNNGTG 1 cut(s) 101
AfaI GTAC 3 cut(s) 990, 1017, 1211
AfiI CCNNNNNNNGG 1 cut(s) 503
AflII CTTAAG 1 cut(s) 521
AflIII ACRYGT 2 cut(s) 141, 1212
AjnI CCWGG 1 cut(s) 502
AluBI AGCT 6 cut(s) 283, 736, 761, 872, 877, 985
AluI AGCT 6 cut(s) 283, 736, 761, 872, 877, 985
AlwI GGATC 4 cut(s) 228, 341, 548, 689
AlwNI CAGNNNCTG 2 cut(s) 764, 1124
AoxI GGCC 2 cut(s) 796, 1258
ApeKI GCWGC 3 cut(s) 585, 761, 1027
ApoI RAATTY 5 cut(s) 294, 469, 787, 1295, 1337
ArsI GACNNNNNNTTYG 2 cut(s) 103, 135
AspLEI GCGC 1 cut(s) 661
AspS9I GGNCC 2 cut(s) 111, 206
AsuHPI GGTGA 1 cut(s) 1032
AvaII GGWCC 2 cut(s) 111, 206
BarI GAAGNNNNNNTAC 2 cut(s) 1271, 1303
BbsI GAAGAC 2 cut(s) 373, 926
BbvI GCAGC 3 cut(s) 572, 748, 1014
BccI CCATC 3 cut(s) 126, 1189, 1269
BceAI ACGGC 2 cut(s) 329, 811
BciT130I CCWGG 1 cut(s) 504
BciVI GTATCC 1 cut(s) 498
BclI TGATCA 1 cut(s) 925
BfaI CTAG 3 cut(s) 164, 633, 1019
BfmI CTRYAG 1 cut(s) 306
BfrI CTTAAG 1 cut(s) 521
BfuI GTATCC 1 cut(s) 498
BglII AGATCT 1 cut(s) 1054
BisI GCNGC 3 cut(s) 586, 762, 1028
BlpI GCTNAGC 1 cut(s) 873
BlsI GCNGC 3 cut(s) 587, 763, 1029
BmcAI AGTACT 1 cut(s) 1017
Bme1390I CCNGG 1 cut(s) 504
Bme18I GGWCC 2 cut(s) 111, 206
BmgT120I GGNCC 2 cut(s) 111, 206
BmiI GGNNCC 2 cut(s) 208, 425
BmrFI CCNGG 1 cut(s) 504
BmrI ACTGGG 1 cut(s) 1018
BmsI GCATC 1 cut(s) 49
BmuI ACTGGG 1 cut(s) 1018
BpiI GAAGAC 2 cut(s) 373, 926
Bpu1102I GCTNAGC 1 cut(s) 873
BpuEI CTTGAG 2 cut(s) 6, 617
Bsa29I ATCGAT 1 cut(s) 324
BsaJI CCNNGG 3 cut(s) 419, 503, 1062
Bsc4I CCNNNNNNNGG 1 cut(s) 503
Bse1I ACTGG 2 cut(s) 810, 1013
Bse3DI GCAATG 1 cut(s) 1097
BseBI CCWGG 1 cut(s) 504
BseCI ATCGAT 1 cut(s) 324
BseDI CCNNGG 3 cut(s) 419, 503, 1062
BseGI GGATG 3 cut(s) 266, 949, 1204
BseLI CCNNNNNNNGG 1 cut(s) 503
BseMI GCAATG 1 cut(s) 1097
BseMII CTCAG 3 cut(s) 864, 1133, 1165
BseNI ACTGG 2 cut(s) 810, 1013
BseRI GAGGAG 3 cut(s) 483, 486, 614
BseXI GCAGC 3 cut(s) 572, 748, 1014
BsgI GTGCAG 1 cut(s) 322
BshFI GGCC 2 cut(s) 798, 1260
BshVI ATCGAT 1 cut(s) 324
BslFI GGGAC 1 cut(s) 192
BslI CCNNNNNNNGG 1 cut(s) 503
BsmFI GGGAC 1 cut(s) 192
BsnI GGCC 2 cut(s) 798, 1260
Bsp143I GATC 8 cut(s) 220, 241, 333, 370, 553, 694, 925, 1054
Bsp1720I GCTNAGC 1 cut(s) 873
BspACI CCGC 1 cut(s) 500
BspANI GGCC 2 cut(s) 798, 1260
BspCNI CTCAG 3 cut(s) 865, 1134, 1164
BspDI ATCGAT 1 cut(s) 324
BspHI TCATGA 2 cut(s) 994, 1084
BspLI GGNNCC 2 cut(s) 208, 425
BspPI GGATC 4 cut(s) 228, 341, 548, 689
BspTI CTTAAG 1 cut(s) 521
BsrDI GCAATG 1 cut(s) 1097
BsrI ACTGG 2 cut(s) 810, 1013
BssECI CCNNGG 3 cut(s) 419, 503, 1062
BssMI GATC 8 cut(s) 220, 241, 333, 370, 553, 694, 925, 1054
BssT1I CCWWGG 1 cut(s) 1062
Bst2UI CCWGG 1 cut(s) 504
Bst4CI ACNGT 3 cut(s) 260, 861, 1209
Bst6I CTCTTC 1 cut(s) 159
BstAFI CTTAAG 1 cut(s) 521
BstDEI CTNAG 3 cut(s) 873, 1142, 1151
BstENI CCTNNNNNAGG 1 cut(s) 501
BstF5I GGATG 3 cut(s) 266, 949, 1204
BstHHI GCGC 1 cut(s) 661
BstKTI GATC 8 cut(s) 223, 244, 336, 373, 556, 697, 928, 1057
BstMBI GATC 8 cut(s) 220, 241, 333, 370, 553, 694, 925, 1054
BstNI CCWGG 1 cut(s) 504
BstNSI RCATGY 2 cut(s) 145, 1216
BstSCI CCNGG 1 cut(s) 502
BstSFI CTRYAG 1 cut(s) 306
BstV1I GCAGC 3 cut(s) 572, 748, 1014
BstV2I GAAGAC 2 cut(s) 373, 926
BstX2I RGATCY 2 cut(s) 333, 1054
BstYI RGATCY 2 cut(s) 333, 1054
Bsu15I ATCGAT 1 cut(s) 324
BsuI GTATCC 1 cut(s) 498
BsuRI GGCC 2 cut(s) 798, 1260
BsuTUI ATCGAT 1 cut(s) 324
BtsCI GGATG 3 cut(s) 266, 949, 1204
BtsI GCAGTG 1 cut(s) 1029
BtsIMutI CAGTG 3 cut(s) 563, 628, 1029
CaiI CAGNNNCTG 2 cut(s) 764, 1124
CciI TCATGA 2 cut(s) 994, 1084
CfoI GCGC 1 cut(s) 661
Cfr13I GGNCC 2 cut(s) 111, 206
ClaI ATCGAT 1 cut(s) 324
Csp6I GTAC 3 cut(s) 989, 1016, 1210
CviQI GTAC 3 cut(s) 989, 1016, 1210
DdeI CTNAG 3 cut(s) 873, 1142, 1151
DpnI GATC 8 cut(s) 222, 243, 335, 372, 555, 696, 927, 1056
DpnII GATC 8 cut(s) 220, 241, 333, 370, 553, 694, 925, 1054
DraI TTTAAA 1 cut(s) 783
DraIII CACNNNGTG 1 cut(s) 101
Eam1104I CTCTTC 1 cut(s) 159
EarI CTCTTC 1 cut(s) 159
EciI GGCGGA 1 cut(s) 489
Eco130I CCWWGG 1 cut(s) 1062
Eco32I GATATC 2 cut(s) 646, 751
Eco47I GGWCC 2 cut(s) 111, 206
Eco57I CTGAAG 2 cut(s) 467, 920
EcoNI CCTNNNNNAGG 1 cut(s) 501
EcoO109I RGGNCCY 1 cut(s) 206
EcoRI GAATTC 1 cut(s) 787
EcoRII CCWGG 1 cut(s) 502
EcoRV GATATC 2 cut(s) 646, 751
EcoT14I CCWWGG 1 cut(s) 1062
ErhI CCWWGG 1 cut(s) 1062
FalI AAGNNNNNCTT 2 cut(s) 357, 389
FaqI GGGAC 1 cut(s) 192
FbaI TGATCA 1 cut(s) 925
Fnu4HI GCNGC 3 cut(s) 586, 762, 1028
FokI GGATG 3 cut(s) 253, 936, 1211
Fsp4HI GCNGC 3 cut(s) 586, 762, 1028
FspBI CTAG 3 cut(s) 164, 633, 1019
GlaI GCGC 1 cut(s) 660
GluI GCNGC 3 cut(s) 586, 762, 1028
HaeIII GGCC 2 cut(s) 798, 1260
HhaI GCGC 1 cut(s) 661
Hin6I GCGC 1 cut(s) 659
HinP1I GCGC 1 cut(s) 659
HindIII AAGCTT 2 cut(s) 281, 734
HinfI GANTC 6 cut(s) 185, 263, 560, 618, 1121, 1173
HphI GGTGA 1 cut(s) 1032
Hpy166II GTNNAC 4 cut(s) 147, 256, 579, 973
Hpy188I TCNGA 5 cut(s) 271, 388, 423, 447, 694
Hpy188III TCNNGA 8 cut(s) 164, 199, 229, 557, 914, 995, 1085, 1345
Hpy8I GTNNAC 4 cut(s) 147, 256, 579, 973
Hpy99I CGWCG 1 cut(s) 235
HpyAV CCTTC 3 cut(s) 392, 442, 1273
HpyCH4III ACNGT 3 cut(s) 260, 861, 1209
HpyCH4IV ACGT 2 cut(s) 233, 1230
HpyCH4V TGCA 5 cut(s) 50, 62, 128, 339, 438
HpyF3I CTNAG 3 cut(s) 873, 1142, 1151
HpySE526I ACGT 2 cut(s) 233, 1230
HspAI GCGC 1 cut(s) 659
Ksp22I TGATCA 1 cut(s) 925
Kzo9I GATC 8 cut(s) 220, 241, 333, 370, 553, 694, 925, 1054
LmnI GCTCC 1 cut(s) 423
Lsp1109I GCAGC 3 cut(s) 572, 748, 1014
LweI GCATC 1 cut(s) 49
MaeI CTAG 3 cut(s) 164, 633, 1019
MaeII ACGT 2 cut(s) 233, 1230
MaeIII GTNAC 3 cut(s) 196, 882, 1226
MalI GATC 8 cut(s) 222, 243, 335, 372, 555, 696, 927, 1056
MboI GATC 8 cut(s) 220, 241, 333, 370, 553, 694, 925, 1054
MboII GAAGA 6 cut(s) 146, 365, 373, 682, 836, 926
MflI RGATCY 2 cut(s) 333, 1054
MlyI GAGTC 2 cut(s) 554, 1130
MmeI TCCRAC 1 cut(s) 294
MseI TTAA 7 cut(s) 276, 291, 483, 522, 782, 1077, 1217
MspA1I CMGCKG 1 cut(s) 761
MspCI CTTAAG 1 cut(s) 521
MspR9I CCNGG 1 cut(s) 504
MvaI CCWGG 1 cut(s) 504
NdeII GATC 8 cut(s) 220, 241, 333, 370, 553, 694, 925, 1054
NlaIV GGNNCC 2 cut(s) 208, 425
NmuCI GTSAC 3 cut(s) 196, 882, 1226
NspI RCATGY 2 cut(s) 145, 1216
PagI TCATGA 2 cut(s) 994, 1084
PciI ACATGT 2 cut(s) 141, 1212
PfeI GAWTC 4 cut(s) 185, 263, 618, 1173
PkrI GCNGC 3 cut(s) 587, 763, 1029
PleI GAGTC 2 cut(s) 554, 1129
PpsI GAGTC 2 cut(s) 554, 1129
PpuMI RGGWCCY 1 cut(s) 206
PscI ACATGT 2 cut(s) 141, 1212
PsiI TTATAA 2 cut(s) 702, 843
Psp5II RGGWCCY 1 cut(s) 206
Psp6I CCWGG 1 cut(s) 502
PspGI CCWGG 1 cut(s) 502
PspN4I GGNNCC 2 cut(s) 208, 425
PspPI GGNCC 2 cut(s) 111, 206
PspPPI RGGWCCY 1 cut(s) 206
PstNI CAGNNNCTG 2 cut(s) 764, 1124
PsuI RGATCY 2 cut(s) 333, 1054
PvuII CAGCTG 1 cut(s) 761
RsaI GTAC 3 cut(s) 990, 1017, 1211
RsaNI GTAC 3 cut(s) 989, 1016, 1210
SaqAI TTAA 7 cut(s) 276, 291, 483, 522, 782, 1077, 1217
SatI GCNGC 3 cut(s) 586, 762, 1028
Sau3AI GATC 8 cut(s) 220, 241, 333, 370, 553, 694, 925, 1054
Sau96I GGNCC 2 cut(s) 111, 206
ScaI AGTACT 1 cut(s) 1017
SchI GAGTC 2 cut(s) 554, 1130
ScrFI CCNGG 1 cut(s) 504
SfaNI GCATC 1 cut(s) 49
SfcI CTRYAG 1 cut(s) 306
SinI GGWCC 2 cut(s) 111, 206
SmlI CTYRAG 3 cut(s) 21, 521, 596
SmoI CTYRAG 3 cut(s) 21, 521, 596
SsiI CCGC 1 cut(s) 500
SspI AATATT 1 cut(s) 1094
SspMI CTAG 3 cut(s) 164, 633, 1019
StyD4I CCNGG 1 cut(s) 502
StyI CCWWGG 1 cut(s) 1062
TaaI ACNGT 3 cut(s) 260, 861, 1209
TaiI ACGT 2 cut(s) 236, 1233
TaqI TCGA 1 cut(s) 324
TatI WGTACW 2 cut(s) 1015, 1209
TfiI GAWTC 4 cut(s) 185, 263, 618, 1173
Tru1I TTAA 7 cut(s) 276, 291, 483, 522, 782, 1077, 1217
Tru9I TTAA 7 cut(s) 276, 291, 483, 522, 782, 1077, 1217
TscAI CASTG 3 cut(s) 570, 628, 1029
TseFI GTSAC 3 cut(s) 196, 882, 1226
TseI GCWGC 3 cut(s) 585, 761, 1027
Tsp45I GTSAC 3 cut(s) 196, 882, 1226
TspRI CASTG 3 cut(s) 570, 628, 1029
Vha464I CTTAAG 1 cut(s) 521
VpaK11BI GGWCC 2 cut(s) 111, 206
XagI CCTNNNNNAGG 1 cut(s) 501
XapI RAATTY 5 cut(s) 294, 469, 787, 1295, 1337
XbaI TCTAGA 1 cut(s) 163
XceI RCATGY 2 cut(s) 145, 1216
XspI CTAG 3 cut(s) 164, 633, 1019
ZrmI AGTACT 1 cut(s) 1017
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.