MD03G1255400.v1.1

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0000079
Physical Location & Seq
Forward (+)
34284820 .. 34287420
2601 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1255400.v1.1.491

Sequence Viewer

Length: 1467 bp
ATGAGTCAAGTTCTCAAAAATGATCGAAGCCTGCAAGGTTCCCACTTTACAGTTGCAGAGGTGATAAAAACGTCGCCGCATCCGACGCTCCTGTGGTTCTCATTTCCCTCCGTTCTCCGTAGCTTTTTCCTCAGATTGAAAGTAAAAATGAGCTTGGTGTTGAAGCGTCGAGCAAAAGTTAAAGATAGGATCAATGCGCTACCAGATGCACTTCTATGTCACATACTTTCGTTCCTTCCTACAAAATATGCTGTGAGGACCACCATTTTGTCTAGAAGGTGGAAGAACTTATGGACTTCTGTTCCCAATCTCTACTTCAACGACAGAAAAGATTTTCCTTCTTTTCAGGCAGGTCCATATGGCTCTAACCTTTTTACCAGATTTGTTGATCGTGTACTTTACTTCCGCGACTCATCAGACATAAAAAAATTCCGTCTTTCAGTTACCTATACTGATGATTTGTCTCATGTTGATGGTTGGCTTTGCACTGCCATAAGGCGTAATGTCGTTGAACTTGATTTTGAGCTTTGTCAATCTCATTATAATCAATACCGGGAATTTGAGTTGCCTCAGAGCCTTTTCACGTGCAGAACACTAACGGTTTTGAAGTTGAGCTCAAACTGCATTACCTATGCTCCTCCTACATCGGGGTGTTTCCCAAGCCTCAAGTTCCTCTATGTCACAGTTCATTATCCTGATACCGACTCAATTGAAAAGCTTATTTCTTGCTGCTCTATCCTGGAAAACTTGAATATAGATGGAATTCTAAGATGTGACGTAGTTTCAAATATCCATATTTCTGTGCCTACACTGAAGACATTGAGTATAAATCTGTCCGTTGATCCTCAGTATCATGATTACAATCTTCTTATCAATGGCCCAAAGCTTGAAAACATTGATTTCAAGCAAGATCTTTCGTCAAATTATTCTCTGGAGCATTCAAAATCCCTAGTTAAAGCTAATATTGTTCTCAAAGAAGTTCCCTGCCGTGTAGTTGCACTACTGGAAGCAATATCAAATGTGAAATATCTGTCTCTTTCAGCTGAACGTTTGAAGGAATGGTATCTCCCTGTTTTTCCTAATTTGAGCCAACTGAAGGTGGTTCTTTATGATAGCTGTTATTGGGAAATGCTAGTAATGTTACTCCGTAAGACGCCCAATCTGGAGGATCTTATCTTAGAAGATAGAACCATATGTCAAAGAGATTATTCAAAGCTTCGGTGGAATCCACCAAAGTTTTTGCTTGTTTATCTGCGGTCGCACCTCAAGACTATCACCATAAGAGGATTCAAGGGACGAGAGATTGAGAGGGAAGTGTCAAAGTATTTGTTAGAGAACGCTAAGATTTTGAAGAAAATGAGGATATATACAAGTCTTGTGCATATTACAGAGAAAGAGCTATACAAGGAATTCTTAATGTTTCAAAGGGGTTCGGTGACTTGTCAAGTTGAATTCATCAAGATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

489

Amino Acids

56.99

Weight (kDa)

9.29

Isoelectric Point (pI)

49.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 66 - 103 9.2e-09 F-box domain
LRR_At5g56370 PF24758 157 - 305 4.6e-15 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 418 - 455 2.8e-13 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 543
Acc36I ACCTGC 1 cut(s) 341
AccII CGCG 1 cut(s) 408
AciI CCGC 3 cut(s) 77, 406, 1255
AclI AACGTT 1 cut(s) 1048
AclWI GGATC 3 cut(s) 197, 836, 1176
AcsI RAATTY 5 cut(s) 428, 557, 762, 1409, 1451
AcuI CTGAAG 2 cut(s) 833, 1115
AcvI CACGTG 1 cut(s) 585
AcyI GRCGYC 1 cut(s) 1154
AfaI GTAC 1 cut(s) 396
AfiI CCNNNNNNNGG 2 cut(s) 647, 1096
AjnI CCWGG 1 cut(s) 738
AjuI GAANNNNNNNTTGG 2 cut(s) 299, 331
Alw21I GWGCWC 1 cut(s) 617
Alw26I GTCTC 2 cut(s) 468, 1038
AlwI GGATC 3 cut(s) 197, 836, 1176
AoxI GGCC 1 cut(s) 877
ApeKI GCWGC 1 cut(s) 729
ApoI RAATTY 5 cut(s) 428, 557, 762, 1409, 1451
ArsI GACNNNNNNTTYG 2 cut(s) 250, 282
AspLEI GCGC 1 cut(s) 199
AspS9I GGNCC 3 cut(s) 258, 353, 878
AsuC2I CCSGG 1 cut(s) 554
AsuHPI GGTGA 3 cut(s) 73, 1267, 1447
AvaII GGWCC 2 cut(s) 258, 353
BanII GRGCYC 1 cut(s) 617
BbrPI CACGTG 1 cut(s) 585
BbsI GAAGAC 1 cut(s) 821
Bbv12I GWGCWC 1 cut(s) 617
BbvI GCAGC 1 cut(s) 716
BccI CCATC 2 cut(s) 467, 752
BceAI ACGGC 1 cut(s) 972
BciT130I CCWGG 1 cut(s) 740
BcnI CCSGG 1 cut(s) 554
BcoDI GTCTC 2 cut(s) 468, 1038
BfaI CTAG 3 cut(s) 273, 950, 1133
BfuAI ACCTGC 1 cut(s) 341
BglII AGATCT 1 cut(s) 910
BisI GCNGC 2 cut(s) 77, 730
BlsI GCNGC 2 cut(s) 78, 731
Bme1390I CCNGG 2 cut(s) 554, 740
Bme18I GGWCC 2 cut(s) 258, 353
BmgT120I GGNCC 3 cut(s) 258, 353, 878
BmiI GGNNCC 1 cut(s) 40
BmrFI CCNGG 2 cut(s) 554, 740
BmsI GCATC 2 cut(s) 88, 196
BpiI GAAGAC 1 cut(s) 821
BpmI CTGGAG 2 cut(s) 953, 1184
BpuEI CTTGAG 2 cut(s) 650, 1250
BpuMI CCSGG 1 cut(s) 554
BsaAI YACGTR 1 cut(s) 585
BsaBI GATNNNNATC 1 cut(s) 861
BsaHI GRCGYC 1 cut(s) 1154
BsaXI ACNNNNNCTCC 2 cut(s) 619, 649
Bsc4I CCNNNNNNNGG 2 cut(s) 647, 1096
Bse1I ACTGG 1 cut(s) 1008
Bse8I GATNNNNATC 1 cut(s) 861
BseBI CCWGG 1 cut(s) 740
BseGI GGATG 1 cut(s) 79
BseJI GATNNNNATC 1 cut(s) 861
BseLI CCNNNNNNNGG 2 cut(s) 647, 1096
BseMII CTCAG 3 cut(s) 145, 584, 860
BseNI ACTGG 1 cut(s) 1008
BseRI GAGGAG 1 cut(s) 627
BseXI GCAGC 1 cut(s) 716
BsgI GTGCAG 1 cut(s) 607
Bsh1236I CGCG 1 cut(s) 408
Bsh1285I CGRYCG 1 cut(s) 1259
BshFI GGCC 1 cut(s) 879
BsiEI CGRYCG 1 cut(s) 1259
BsiHKAI GWGCWC 1 cut(s) 617
BsiSI CCGG 1 cut(s) 553
BslFI GGGAC 1 cut(s) 1308
BslI CCNNNNNNNGG 2 cut(s) 647, 1096
BsmAI GTCTC 2 cut(s) 468, 1038
BsmFI GGGAC 1 cut(s) 1308
BsmI GAATGC 1 cut(s) 937
BsnI GGCC 1 cut(s) 879
Bsp1286I GDGCHC 1 cut(s) 617
Bsp143I GATC 6 cut(s) 22, 189, 388, 841, 910, 1168
BspACI CCGC 3 cut(s) 77, 406, 1255
BspANI GGCC 1 cut(s) 879
BspCNI CTCAG 3 cut(s) 144, 583, 859
BspFNI CGCG 1 cut(s) 408
BspHI TCATGA 1 cut(s) 853
BspLI GGNNCC 1 cut(s) 40
BspMI ACCTGC 1 cut(s) 341
BspPI GGATC 3 cut(s) 197, 836, 1176
BsrI ACTGG 1 cut(s) 1008
BssMI GATC 6 cut(s) 22, 189, 388, 841, 910, 1168
BssNI GRCGYC 1 cut(s) 1154
Bst2UI CCWGG 1 cut(s) 740
Bst4CI ACNGT 3 cut(s) 52, 601, 685
BstACI GRCGYC 1 cut(s) 1154
BstBAI YACGTR 1 cut(s) 585
BstC8I GCNNGC 1 cut(s) 32
BstDEI CTNAG 6 cut(s) 131, 570, 767, 846, 1177, 1341
BstF5I GGATG 1 cut(s) 79
BstFNI CGCG 1 cut(s) 408
BstHHI GCGC 1 cut(s) 199
BstKTI GATC 6 cut(s) 25, 192, 391, 844, 913, 1171
BstMAI GTCTC 2 cut(s) 468, 1038
BstMBI GATC 6 cut(s) 22, 189, 388, 841, 910, 1168
BstMCI CGRYCG 1 cut(s) 1259
BstMWI GCNNNNNNNGC 2 cut(s) 85, 621
BstNI CCWGG 1 cut(s) 740
BstSCI CCNGG 2 cut(s) 552, 738
BstUI CGCG 1 cut(s) 408
BstV1I GCAGC 1 cut(s) 716
BstV2I GAAGAC 1 cut(s) 821
BstX2I RGATCY 2 cut(s) 910, 1168
BstYI RGATCY 2 cut(s) 910, 1168
BsuRI GGCC 1 cut(s) 879
BtsCI GGATG 1 cut(s) 79
BtsI GCAGTG 1 cut(s) 486
BtsIMutI CAGTG 2 cut(s) 486, 809
BveI ACCTGC 1 cut(s) 341
Cac8I GCNNGC 1 cut(s) 32
CciI TCATGA 1 cut(s) 853
CfoI GCGC 1 cut(s) 199
Cfr13I GGNCC 3 cut(s) 258, 353, 878
CseI GACGC 3 cut(s) 94, 155, 1162
Csp6I GTAC 1 cut(s) 395
CviAII CATG 2 cut(s) 467, 854
CviQI GTAC 1 cut(s) 395
DdeI CTNAG 6 cut(s) 131, 570, 767, 846, 1177, 1341
DpnI GATC 6 cut(s) 24, 191, 390, 843, 912, 1170
DpnII GATC 6 cut(s) 22, 189, 388, 841, 910, 1168
Ecl136II GAGCTC 1 cut(s) 615
Eco24I GRGCYC 1 cut(s) 617
Eco47I GGWCC 2 cut(s) 258, 353
Eco53kI GAGCTC 1 cut(s) 615
Eco57I CTGAAG 2 cut(s) 833, 1115
Eco72I CACGTG 1 cut(s) 585
EcoICRI GAGCTC 1 cut(s) 615
EcoRI GAATTC 3 cut(s) 762, 1409, 1451
EcoRII CCWGG 1 cut(s) 738
EcoT38I GRGCYC 1 cut(s) 617
FaeI CATG 2 cut(s) 470, 857
FalI AAGNNNNNCTT 2 cut(s) 1397, 1429
FaqI GGGAC 1 cut(s) 1308
FatI CATG 2 cut(s) 466, 853
FauNDI CATATG 2 cut(s) 358, 1193
Fnu4HI GCNGC 2 cut(s) 77, 730
FokI GGATG 1 cut(s) 66
FriOI GRGCYC 1 cut(s) 617
Fsp4HI GCNGC 2 cut(s) 77, 730
FspBI CTAG 3 cut(s) 273, 950, 1133
GlaI GCGC 1 cut(s) 198
GluI GCNGC 2 cut(s) 77, 730
GsuI CTGGAG 2 cut(s) 953, 1184
HaeIII GGCC 1 cut(s) 879
HapII CCGG 1 cut(s) 553
HgaI GACGC 3 cut(s) 94, 155, 1162
HhaI GCGC 1 cut(s) 199
Hin1I GRCGYC 1 cut(s) 1154
Hin1II CATG 2 cut(s) 470, 857
Hin6I GCGC 1 cut(s) 197
HinP1I GCGC 1 cut(s) 197
HindIII AAGCTT 3 cut(s) 716, 884, 1214
HinfI GANTC 5 cut(s) 4, 410, 704, 1225, 1287
HpaII CCGG 1 cut(s) 553
HphI GGTGA 3 cut(s) 73, 1267, 1447
Hpy166II GTNNAC 1 cut(s) 395
Hpy188I TCNGA 4 cut(s) 84, 134, 418, 573
Hpy188III TCNNGA 7 cut(s) 273, 695, 854, 932, 1163, 1267, 1459
Hpy8I GTNNAC 1 cut(s) 395
Hpy99I CGWCG 3 cut(s) 76, 88, 171
HpyAV CCTTC 5 cut(s) 245, 270, 348, 1048, 1090
HpyCH4III ACNGT 3 cut(s) 52, 601, 685
HpyCH4IV ACGT 4 cut(s) 71, 584, 777, 1048
HpyCH4V TGCA 8 cut(s) 34, 56, 209, 486, 588, 624, 998, 1381
HpyF10VI GCNNNNNNNGC 2 cut(s) 85, 621
HpyF3I CTNAG 6 cut(s) 131, 570, 767, 846, 1177, 1341
HpySE526I ACGT 4 cut(s) 71, 584, 777, 1048
Hsp92I GRCGYC 1 cut(s) 1154
Hsp92II CATG 2 cut(s) 470, 857
HspAI GCGC 1 cut(s) 197
Kzo9I GATC 6 cut(s) 22, 189, 388, 841, 910, 1168
LmnI GCTCC 3 cut(s) 93, 640, 934
Lsp1109I GCAGC 1 cut(s) 716
LweI GCATC 2 cut(s) 88, 196
MaeI CTAG 3 cut(s) 273, 950, 1133
MaeII ACGT 4 cut(s) 71, 584, 777, 1048
MaeIII GTNAC 6 cut(s) 218, 442, 679, 773, 1140, 1435
MalI GATC 6 cut(s) 24, 191, 390, 843, 912, 1170
MboI GATC 6 cut(s) 22, 189, 388, 841, 910, 1168
MboII GAAGA 5 cut(s) 295, 826, 857, 1193, 1363
MfeI CAATTG 1 cut(s) 708
MflI RGATCY 2 cut(s) 910, 1168
MhlI GDGCHC 1 cut(s) 617
MluCI AATT 8 cut(s) 428, 557, 708, 762, 922, 1081, 1409, 1451
MlyI GAGTC 3 cut(s) 13, 404, 698
MmeI TCCRAC 1 cut(s) 107
MseI TTAA 3 cut(s) 180, 954, 1415
MslI CAYNNNNRTG 4 cut(s) 214, 471, 649, 1460
MspA1I CMGCKG 1 cut(s) 1043
MspI CCGG 1 cut(s) 553
MspR9I CCNGG 2 cut(s) 554, 740
MunI CAATTG 1 cut(s) 708
Mva1269I GAATGC 1 cut(s) 937
MvaI CCWGG 1 cut(s) 740
MvnI CGCG 1 cut(s) 408
MwoI GCNNNNNNNGC 2 cut(s) 85, 621
NciI CCSGG 1 cut(s) 554
NdeI CATATG 2 cut(s) 358, 1193
NdeII GATC 6 cut(s) 22, 189, 388, 841, 910, 1168
NlaIII CATG 2 cut(s) 470, 857
NlaIV GGNNCC 1 cut(s) 40
NmuCI GTSAC 4 cut(s) 218, 679, 773, 1435
PagI TCATGA 1 cut(s) 853
PcsI WCGNNNNNNNCGW 1 cut(s) 80
PctI GAATGC 1 cut(s) 937
PfeI GAWTC 2 cut(s) 1225, 1287
PfoI TCCNGGA 1 cut(s) 738
PkrI GCNGC 2 cut(s) 78, 731
PleI GAGTC 3 cut(s) 12, 404, 698
PmaCI CACGTG 1 cut(s) 585
PmlI CACGTG 1 cut(s) 585
PpsI GAGTC 3 cut(s) 12, 404, 698
Ppu21I YACGTR 1 cut(s) 585
PsiI TTATAA 1 cut(s) 543
Psp124BI GAGCTC 1 cut(s) 617
Psp1406I AACGTT 1 cut(s) 1048
Psp6I CCWGG 1 cut(s) 738
PspCI CACGTG 1 cut(s) 585
PspGI CCWGG 1 cut(s) 738
PspN4I GGNNCC 1 cut(s) 40
PspPI GGNCC 3 cut(s) 258, 353, 878
PsuI RGATCY 2 cut(s) 910, 1168
PvuII CAGCTG 1 cut(s) 1043
RsaI GTAC 1 cut(s) 396
RsaNI GTAC 1 cut(s) 395
RseI CAYNNNNRTG 4 cut(s) 214, 471, 649, 1460
SacI GAGCTC 1 cut(s) 617
SaqAI TTAA 3 cut(s) 180, 954, 1415
SatI GCNGC 2 cut(s) 77, 730
Sau3AI GATC 6 cut(s) 22, 189, 388, 841, 910, 1168
Sau96I GGNCC 3 cut(s) 258, 353, 878
SchI GAGTC 3 cut(s) 13, 404, 698
ScrFI CCNGG 2 cut(s) 554, 740
SduI GDGCHC 1 cut(s) 617
SfaNI GCATC 2 cut(s) 88, 196
SinI GGWCC 2 cut(s) 258, 353
SmiMI CAYNNNNRTG 4 cut(s) 214, 471, 649, 1460
SmlI CTYRAG 2 cut(s) 665, 1265
SmoI CTYRAG 2 cut(s) 665, 1265
Sse9I AATT 8 cut(s) 428, 557, 708, 762, 922, 1081, 1409, 1451
SsiI CCGC 3 cut(s) 77, 406, 1255
SspI AATATT 1 cut(s) 964
SspMI CTAG 3 cut(s) 273, 950, 1133
SstI GAGCTC 1 cut(s) 617
StyD4I CCNGG 2 cut(s) 552, 738
TaaI ACNGT 3 cut(s) 52, 601, 685
TaiI ACGT 4 cut(s) 74, 587, 780, 1051
TaqI TCGA 2 cut(s) 25, 169
TasI AATT 8 cut(s) 428, 557, 708, 762, 922, 1081, 1409, 1451
TatI WGTACW 1 cut(s) 394
TauI GCSGC 1 cut(s) 79
TfiI GAWTC 2 cut(s) 1225, 1287
Tru1I TTAA 3 cut(s) 180, 954, 1415
Tru9I TTAA 3 cut(s) 180, 954, 1415
TscAI CASTG 2 cut(s) 493, 816
TseFI GTSAC 4 cut(s) 218, 679, 773, 1435
TseI GCWGC 1 cut(s) 729
Tsp45I GTSAC 4 cut(s) 218, 679, 773, 1435
TspDTI ATGAA 2 cut(s) 677, 1444
TspGWI ACGGA 5 cut(s) 100, 107, 422, 826, 1136
TspRI CASTG 2 cut(s) 493, 816
VpaK11BI GGWCC 2 cut(s) 258, 353
XapI RAATTY 5 cut(s) 428, 557, 762, 1409, 1451
XbaI TCTAGA 1 cut(s) 272
XspI CTAG 3 cut(s) 273, 950, 1133
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.