Rw3G008730

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0000079
Physical Location & Seq
Forward (+)
8076477 .. 8077707
1231 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G008730.1

Sequence Viewer

Length: 996 bp
ATGAAAAGTTTGGAGAAGTTGAAGCTGAGCCTGCAATCGTTTATTACCATTACTCCTGAACCAAATTGGTTCTCAAGTCTCAAGTTTCTCTATGTTTCAGTCTCATTTGCTGGTTCTCATCTGATGGAGAACCTCTTTTCTTGCTGCCCTGTACTTGAAGAGTTGATTTTTGATGCGGACCCTGAATATGATGATGATTCAGTTTCTAACGTTAACATCTCTGCACCGAAGCTGAAAAGACTACAAATAAGCTTGTTCCTGGAAACATATGATCTAGAGCTAGTAGAATATGAGCACAAACTTTTTATCAATGCCAATGCTCCAAATCTTGAAAAGTTCACTTTCGACGGCAATCTTTTGGTAATCTATTCCTCGAGCAATGCCAAATTCCTGAACGAAGCCAAGATTGATTGCGCAGACCTGCATGCAGGTCAAGAGCTTGACTATCACCTTGATGCTGCTGATAATTTGCACAGGCTTTTCACAGGAATTTTGAATGTTACTTACCTGTCAGTTTCAGCTCCTATTTTTGGGGATCCCCACATTGTACATCAGTATCATCCCCCTACATTTGTTAATTTGAAGCACTTGAAGCTACTTCTTCAAGCTTGCTGCTCTTGGCAACCATTGATTAGTTTTCTGAATGCATCGCCAAATCTGGAATCTCTTGTCTTGAAAAAGAGCCGCGATTGCCTATGTCGACACGATCCGGATGAATTACATCATGAATGGAATCCACCAGAGTATGTGCCTGTTTGTTTGGTGTCACACTTGAAGACTATTTGCATACGTGGGTACAGGGGGAGGCCAGATCAGATGGAAGTGGCAGAATACTTGTTGAAGCACGGTGAGGTTTTGGATAAGGTGACAGTTCATCGGACTTCCAAATGTATCTCTTCAAAAAAAGAGAAGAAATTATGGCGGGGATTGAAGAAGTTGCCGAGGTGTTCGAAGACATGTCAAATTGAATTTCCATGCCTCTCTGTCACAGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

331

Amino Acids

37.81

Weight (kDa)

6.31

Isoelectric Point (pI)

34.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 2 - 301 5.7e-12 At1g61320/AtMIF1, LRR domain
FBD PF08387 247 - 290 3.6e-15 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 415
Acc36I ACCTGC 2 cut(s) 419, 429
AccI GTMKAC 1 cut(s) 700
AccII CGCG 1 cut(s) 687
AccIII TCCGGA 1 cut(s) 709
AciI CCGC 3 cut(s) 176, 685, 922
AclI AACGTT 1 cut(s) 210
AclWI GGATC 3 cut(s) 530, 543, 701
AcsI RAATTY 3 cut(s) 386, 489, 968
AfaI GTAC 3 cut(s) 153, 549, 797
AfiI CCNNNNNNNGG 1 cut(s) 530
AflIII ACRYGT 1 cut(s) 956
AjnI CCWGG 1 cut(s) 258
AluBI AGCT 8 cut(s) 25, 232, 252, 280, 439, 521, 595, 608
AluI AGCT 8 cut(s) 25, 232, 252, 280, 439, 521, 595, 608
Alw21I GWGCWC 1 cut(s) 297
Alw26I GTCTC 2 cut(s) 83, 106
AlwI GGATC 3 cut(s) 530, 543, 701
Ama87I CYCGRG 1 cut(s) 373
Aor13HI TCCGGA 1 cut(s) 709
AoxI GGCC 1 cut(s) 806
ApeKI GCWGC 3 cut(s) 144, 458, 612
ApoI RAATTY 3 cut(s) 386, 489, 968
AspLEI GCGC 1 cut(s) 416
AspS9I GGNCC 1 cut(s) 178
AsuHPI GGTGA 3 cut(s) 440, 860, 877
AsuII TTCGAA 1 cut(s) 950
AvaI CYCGRG 1 cut(s) 373
AvaII GGWCC 1 cut(s) 178
BaeI ACNNNNGTAYC 2 cut(s) 539, 572
BamHI GGATCC 1 cut(s) 535
BbsI GAAGAC 2 cut(s) 782, 959
Bbv12I GWGCWC 1 cut(s) 297
BbvI GCAGC 3 cut(s) 131, 445, 599
BccI CCATC 2 cut(s) 118, 811
BceAI ACGGC 1 cut(s) 364
BciT130I CCWGG 1 cut(s) 260
BcoDI GTCTC 2 cut(s) 83, 106
BfaI CTAG 2 cut(s) 275, 281
BfuAI ACCTGC 2 cut(s) 419, 429
BisI GCNGC 4 cut(s) 145, 459, 613, 685
BlpI GCTNAGC 1 cut(s) 26
BlsI GCNGC 4 cut(s) 146, 460, 614, 686
Bme1390I CCNGG 1 cut(s) 260
Bme18I GGWCC 1 cut(s) 178
BmeT110I CYCGRG 1 cut(s) 373
BmgT120I GGNCC 1 cut(s) 178
BmiI GGNNCC 2 cut(s) 180, 537
BmrFI CCNGG 1 cut(s) 260
BmsI GCATC 3 cut(s) 163, 445, 656
BpiI GAAGAC 2 cut(s) 782, 959
Bpu1102I GCTNAGC 1 cut(s) 26
Bpu14I TTCGAA 1 cut(s) 950
BpuEI CTTGAG 2 cut(s) 58, 65
BsaAI YACGTR 1 cut(s) 791
BsaJI CCNNGG 1 cut(s) 941
BsaWI WCCGGW 1 cut(s) 709
BsaXI ACNNNNNCTCC 2 cut(s) 37, 67
Bsc4I CCNNNNNNNGG 1 cut(s) 530
Bse3DI GCAATG 1 cut(s) 385
BseAI TCCGGA 1 cut(s) 709
BseBI CCWGG 1 cut(s) 260
BseDI CCNNGG 1 cut(s) 941
BseGI GGATG 2 cut(s) 559, 718
BseLI CCNNNNNNNGG 1 cut(s) 530
BseMI GCAATG 1 cut(s) 385
BseMII CTCAG 1 cut(s) 17
BseXI GCAGC 3 cut(s) 131, 445, 599
BsgI GTGCAG 1 cut(s) 207
Bsh1236I CGCG 1 cut(s) 687
BshFI GGCC 1 cut(s) 808
BsiHKAI GWGCWC 1 cut(s) 297
BsiHKCI CYCGRG 1 cut(s) 373
BsiSI CCGG 1 cut(s) 710
BslI CCNNNNNNNGG 1 cut(s) 530
BsmAI GTCTC 2 cut(s) 83, 106
BsmI GAATGC 1 cut(s) 649
BsnI GGCC 1 cut(s) 808
BsoBI CYCGRG 1 cut(s) 373
Bsp119I TTCGAA 1 cut(s) 950
Bsp1286I GDGCHC 1 cut(s) 297
Bsp13I TCCGGA 1 cut(s) 709
Bsp1407I TGTACA 1 cut(s) 547
Bsp143I GATC 4 cut(s) 271, 535, 706, 811
Bsp1720I GCTNAGC 1 cut(s) 26
BspACI CCGC 3 cut(s) 176, 685, 922
BspANI GGCC 1 cut(s) 808
BspCNI CTCAG 1 cut(s) 18
BspEI TCCGGA 1 cut(s) 709
BspFNI CGCG 1 cut(s) 687
BspHI TCATGA 1 cut(s) 724
BspLI GGNNCC 2 cut(s) 180, 537
BspMI ACCTGC 2 cut(s) 419, 429
BspPI GGATC 3 cut(s) 530, 543, 701
BspT104I TTCGAA 1 cut(s) 950
BsrDI GCAATG 1 cut(s) 385
BsrGI TGTACA 1 cut(s) 547
BssECI CCNNGG 1 cut(s) 941
BssMI GATC 4 cut(s) 271, 535, 706, 811
Bst2UI CCWGG 1 cut(s) 260
Bst4CI ACNGT 2 cut(s) 848, 871
Bst6I CTCTTC 2 cut(s) 153, 901
BstAUI TGTACA 1 cut(s) 547
BstBAI YACGTR 1 cut(s) 791
BstBI TTCGAA 1 cut(s) 950
BstC8I GCNNGC 3 cut(s) 32, 426, 610
BstDEI CTNAG 1 cut(s) 26
BstF5I GGATG 2 cut(s) 559, 718
BstFNI CGCG 1 cut(s) 687
BstHHI GCGC 1 cut(s) 416
BstKTI GATC 4 cut(s) 274, 538, 709, 814
BstMAI GTCTC 2 cut(s) 83, 106
BstMBI GATC 4 cut(s) 271, 535, 706, 811
BstMWI GCNNNNNNNGC 3 cut(s) 31, 592, 690
BstNI CCWGG 1 cut(s) 260
BstNSI RCATGY 2 cut(s) 428, 960
BstSCI CCNGG 1 cut(s) 258
BstUI CGCG 1 cut(s) 687
BstV1I GCAGC 3 cut(s) 131, 445, 599
BstV2I GAAGAC 2 cut(s) 782, 959
BstX2I RGATCY 1 cut(s) 535
BstYI RGATCY 1 cut(s) 535
BsuRI GGCC 1 cut(s) 808
BtgZI GCGATG 1 cut(s) 633
BtsCI GGATG 2 cut(s) 559, 718
BveI ACCTGC 2 cut(s) 419, 429
Cac8I GCNNGC 3 cut(s) 32, 426, 610
CciI TCATGA 1 cut(s) 724
CfoI GCGC 1 cut(s) 416
Cfr13I GGNCC 1 cut(s) 178
Csp6I GTAC 3 cut(s) 152, 548, 796
CviAII CATG 4 cut(s) 425, 725, 957, 975
CviQI GTAC 3 cut(s) 152, 548, 796
DdeI CTNAG 1 cut(s) 26
DpnI GATC 4 cut(s) 273, 537, 708, 813
DpnII GATC 4 cut(s) 271, 535, 706, 811
Eam1104I CTCTTC 2 cut(s) 153, 901
EarI CTCTTC 2 cut(s) 153, 901
Eco47I GGWCC 1 cut(s) 178
Eco88I CYCGRG 1 cut(s) 373
EcoRII CCWGG 1 cut(s) 258
EcoT22I ATGCAT 1 cut(s) 649
FaeI CATG 4 cut(s) 428, 728, 960, 978
FatI CATG 4 cut(s) 424, 724, 956, 974
FauI CCCGC 1 cut(s) 915
FauNDI CATATG 1 cut(s) 268
FblI GTMKAC 1 cut(s) 700
Fnu4HI GCNGC 4 cut(s) 145, 459, 613, 685
FokI GGATG 2 cut(s) 546, 725
Fsp4HI GCNGC 4 cut(s) 145, 459, 613, 685
FspBI CTAG 2 cut(s) 275, 281
FspI TGCGCA 1 cut(s) 415
GlaI GCGC 1 cut(s) 415
GluI GCNGC 4 cut(s) 145, 459, 613, 685
HaeIII GGCC 1 cut(s) 808
HapII CCGG 1 cut(s) 710
HhaI GCGC 1 cut(s) 416
Hin1II CATG 4 cut(s) 428, 728, 960, 978
Hin6I GCGC 1 cut(s) 414
HinP1I GCGC 1 cut(s) 414
HincII GTYRAC 2 cut(s) 214, 701
HindII GTYRAC 2 cut(s) 214, 701
HindIII AAGCTT 2 cut(s) 250, 606
HinfI GANTC 3 cut(s) 197, 662, 733
HpaI GTTAAC 1 cut(s) 214
HpaII CCGG 1 cut(s) 710
HphI GGTGA 3 cut(s) 440, 860, 877
Hpy166II GTNNAC 3 cut(s) 214, 339, 701
Hpy188I TCNGA 4 cut(s) 123, 642, 816, 879
Hpy188III TCNNGA 9 cut(s) 56, 275, 329, 391, 434, 659, 673, 710, 725
Hpy8I GTNNAC 3 cut(s) 214, 339, 701
Hpy99I CGWCG 1 cut(s) 350
HpyCH4III ACNGT 2 cut(s) 848, 871
HpyCH4IV ACGT 2 cut(s) 210, 790
HpyCH4V TGCA 7 cut(s) 34, 224, 424, 428, 472, 647, 786
HpyF10VI GCNNNNNNNGC 3 cut(s) 31, 592, 690
HpyF3I CTNAG 1 cut(s) 26
HpySE526I ACGT 2 cut(s) 210, 790
Hsp92II CATG 4 cut(s) 428, 728, 960, 978
HspAI GCGC 1 cut(s) 414
Kpn2I TCCGGA 1 cut(s) 709
KspAI GTTAAC 1 cut(s) 214
Kzo9I GATC 4 cut(s) 271, 535, 706, 811
LmnI GCTCC 2 cut(s) 325, 526
Lsp1109I GCAGC 3 cut(s) 131, 445, 599
LweI GCATC 3 cut(s) 163, 445, 656
MaeI CTAG 2 cut(s) 275, 281
MaeII ACGT 2 cut(s) 210, 790
MaeIII GTNAC 4 cut(s) 499, 765, 865, 985
MalI GATC 4 cut(s) 273, 537, 708, 813
MboI GATC 4 cut(s) 271, 535, 706, 811
MboII GAAGA 7 cut(s) 170, 593, 787, 888, 922, 943, 964
MflI RGATCY 1 cut(s) 535
MhlI GDGCHC 1 cut(s) 297
MluCI AATT 9 cut(s) 64, 386, 466, 489, 577, 716, 914, 963, 968
MnlI CCTC 6 cut(s) 143, 382, 798, 844, 936, 989
Mph1103I ATGCAT 1 cut(s) 649
MroI TCCGGA 1 cut(s) 709
MseI TTAA 2 cut(s) 213, 576
MslI CAYNNNNRTG 1 cut(s) 453
MspI CCGG 1 cut(s) 710
MspR9I CCNGG 1 cut(s) 260
Mva1269I GAATGC 1 cut(s) 649
MvaI CCWGG 1 cut(s) 260
MvnI CGCG 1 cut(s) 687
MwoI GCNNNNNNNGC 3 cut(s) 31, 592, 690
NdeI CATATG 1 cut(s) 268
NdeII GATC 4 cut(s) 271, 535, 706, 811
NlaIII CATG 4 cut(s) 428, 728, 960, 978
NlaIV GGNNCC 2 cut(s) 180, 537
NmeAIII GCCGAG 1 cut(s) 966
NmuCI GTSAC 3 cut(s) 765, 865, 985
NsbI TGCGCA 1 cut(s) 415
NsiI ATGCAT 1 cut(s) 649
NspI RCATGY 2 cut(s) 428, 960
NspV TTCGAA 1 cut(s) 950
PaeI GCATGC 1 cut(s) 428
PaeR7I CTCGAG 1 cut(s) 373
PagI TCATGA 1 cut(s) 724
PciI ACATGT 1 cut(s) 956
PctI GAATGC 1 cut(s) 649
PfeI GAWTC 3 cut(s) 197, 662, 733
PfoI TCCNGGA 1 cut(s) 258
PkrI GCNGC 4 cut(s) 146, 460, 614, 686
Ppu21I YACGTR 1 cut(s) 791
PscI ACATGT 1 cut(s) 956
Psp1406I AACGTT 1 cut(s) 210
Psp6I CCWGG 1 cut(s) 258
PspGI CCWGG 1 cut(s) 258
PspN4I GGNNCC 2 cut(s) 180, 537
PspPI GGNCC 1 cut(s) 178
PspXI VCTCGAGB 1 cut(s) 373
PsuI RGATCY 1 cut(s) 535
RsaI GTAC 3 cut(s) 153, 549, 797
RsaNI GTAC 3 cut(s) 152, 548, 796
RseI CAYNNNNRTG 1 cut(s) 453
SalI GTCGAC 1 cut(s) 699
SaqAI TTAA 2 cut(s) 213, 576
SatI GCNGC 4 cut(s) 145, 459, 613, 685
Sau3AI GATC 4 cut(s) 271, 535, 706, 811
Sau96I GGNCC 1 cut(s) 178
ScrFI CCNGG 1 cut(s) 260
SduI GDGCHC 1 cut(s) 297
SfaNI GCATC 3 cut(s) 163, 445, 656
Sfr274I CTCGAG 1 cut(s) 373
SfuI TTCGAA 1 cut(s) 950
SinI GGWCC 1 cut(s) 178
SlaI CTCGAG 1 cut(s) 373
SmiMI CAYNNNNRTG 1 cut(s) 453
SmlI CTYRAG 3 cut(s) 73, 80, 373
SmoI CTYRAG 3 cut(s) 73, 80, 373
SphI GCATGC 1 cut(s) 428
Sse9I AATT 9 cut(s) 64, 386, 466, 489, 577, 716, 914, 963, 968
SsiI CCGC 3 cut(s) 176, 685, 922
SspMI CTAG 2 cut(s) 275, 281
StyD4I CCNGG 1 cut(s) 258
TaaI ACNGT 2 cut(s) 848, 871
TaiI ACGT 2 cut(s) 213, 793
TaqI TCGA 4 cut(s) 345, 374, 700, 950
TasI AATT 9 cut(s) 64, 386, 466, 489, 577, 716, 914, 963, 968
TatI WGTACW 2 cut(s) 151, 547
TauI GCSGC 1 cut(s) 687
TfiI GAWTC 3 cut(s) 197, 662, 733
Tru1I TTAA 2 cut(s) 213, 576
Tru9I TTAA 2 cut(s) 213, 576
TseFI GTSAC 3 cut(s) 765, 865, 985
TseI GCWGC 3 cut(s) 144, 458, 612
Tsp45I GTSAC 3 cut(s) 765, 865, 985
TspDTI ATGAA 4 cut(s) 17, 729, 741, 863
VpaK11BI GGWCC 1 cut(s) 178
XapI RAATTY 3 cut(s) 386, 489, 968
XbaI TCTAGA 1 cut(s) 274
XceI RCATGY 2 cut(s) 428, 960
XhoI CTCGAG 1 cut(s) 373
XmiI GTMKAC 1 cut(s) 700
XspI CTAG 2 cut(s) 275, 281
Zsp2I ATGCAT 1 cut(s) 649
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.