Rw4G001080

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0000079
Physical Location & Seq
Reverse (-)
2106859 .. 2108346
1488 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G001080.1

Sequence Viewer

Length: 1488 bp
ATGAAGGACACGCGAGATCTCAAACGTGCACATGAAGATTCAAAATCACAACTCCAAGCTGCGGAAGGTATTGGAGATGACAAGATCAGTGCGTTACCCGATGAGATTCTCTGTCATATACTCTCTCTCCTCAGCCCGTTATATTCTGTCCGGACCACCGTCTTGTCTAAGAGGTGGAACAACTTGTGGACTAGTTGTATTACCAACCTTGATTTCGACATGTATGATTTCCGTTCATCATGGGATAACTATCGCATTTTCGTCAGGTTCGTTGATCAGGTGTTGGCCTTACGCGACTCATCGTTAGACATCAGAAGATTTCGTGTTGATTGGGTCGATTATGAAGATTTCTCTATTATTGATCGTTGGATACGTGCCGCCATCAAGGCTAATGTAGTTGAGCTTGTTGTTTCTTTCAGTGTGGATTGTTGTGGTGAACCTGACTCGGTGCGTCCTTTCGAAATTCCTCGAAGTGTTTTTACCTGCAAATCACTGGTGGCTTTGAAGGTGAAGTCAGATTATCTTACCTATTCTCTTCCTACACAACAACCTTGTTTCCCAAATCTCAAGTTCCTTCATTTTTCTTCTAGGCATAATTCTGATTCGGCCTCTGAGGAAAATCTTTTCCGTAGCTGCCCTGTACTTGAAGAGTTGACTATAGAAGGACATCATAAGAAAGATGTTTTGAATTTCAACATATCTGCACCTGAATTGCGGACACTAACGACCATCATTTCAGAAGAAAGTGATGAAGAATTTGATGAATCGGATGAAGCTTCTGGCGGAGATGGTTCTGGAGAATATAGGGTAGAACCCTGCAATTTCTTTATCGATGCCCCAAAACTAGAAAACCTTTGTGTTGCGGGAGAGGTTATGTCAACGTATATTTTGGAGAACTCAACCTCCTTAGTTCAAGCCAAAGTTCAACTCCAAGAGTTCCATGAAGCTTGCGCTGACCGTGTTGCTGAGTTCTTGGATAGAATTTCAAGCGTCAGATACATGGTCCTTTCAGCTCCTGATTTTAAGCCTTGTTTGCCGCATGTTTTTAGTAATTTGATCAAGCTAGAGCTGGTTTTTAACAATCAGTCTTGCTGGAAATGGCTTGCCGACGTGCTCAACATATCGCCTAATCTAGAATATCTTGTCTTAGACTTTGCAAAAATAAAATCAGGAGGACGAGATTCATTGCCTGATTTGGAATCTTTTGGAGATGACTTTGCAAGCATCAACAGGAGAGAAGGATGGGATTCCTTCCATCCACCAGAGTTTTTGCCTAGGTGTTTGTCTTCACAGCTCCAGACTATCTCCATAAAGGGATTCAAAGGAACACTGAATGAGATTGGCGTGGCAGTGTATTTGTTAATCTATGGTGAAGTTCTAAATAAGGTGATTGTTTCTTGTGAGAGTTGTTCCAGCATTCGCGGTGCAAAGGAGAAGATTTTATCCTTTGTAAAGGGTTCAAAGACATGTCAAGTTAGTTTTATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

495

Amino Acids

56.18

Weight (kDa)

4.99

Isoelectric Point (pI)

48.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 29 - 66 6.6e-08 F-box domain
LRR_At5g56370 PF24758 120 - 246 1.6e-11 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 421 - 464 5e-08 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 491
AccII CGCG 3 cut(s) 13, 294, 1422
AccIII TCCGGA 1 cut(s) 150
AciI CCGC 7 cut(s) 62, 378, 715, 783, 863, 1037, 1422
AcsI RAATTY 4 cut(s) 462, 688, 755, 981
AfaI GTAC 1 cut(s) 642
AfiI CCNNNNNNNGG 1 cut(s) 61
AflIII ACRYGT 2 cut(s) 219, 1466
AhlI ACTAGT 1 cut(s) 191
AjiI CACGTC 1 cut(s) 1111
AjuI GAANNNNNNNTTGG 2 cut(s) 197, 229
AloI GAACNNNNNNTCC 2 cut(s) 887, 919
AluBI AGCT 9 cut(s) 59, 403, 633, 776, 947, 1013, 1063, 1069, 1294
AluI AGCT 9 cut(s) 59, 403, 633, 776, 947, 1013, 1063, 1069, 1294
Alw21I GWGCWC 2 cut(s) 31, 1116
Alw44I GTGCAC 1 cut(s) 27
AlwNI CAGNNNCTG 1 cut(s) 1016
Aor13HI TCCGGA 1 cut(s) 150
AoxI GGCC 2 cut(s) 285, 606
ApaLI GTGCAC 1 cut(s) 27
ApeKI GCWGC 2 cut(s) 59, 633
ApoI RAATTY 4 cut(s) 462, 688, 755, 981
AspA2I CCTAGG 1 cut(s) 1274
AspLEI GCGC 1 cut(s) 953
AspS9I GGNCC 2 cut(s) 153, 1003
AsuHPI GGTGA 4 cut(s) 446, 520, 1382, 1399
AsuII TTCGAA 1 cut(s) 459
AvaII GGWCC 2 cut(s) 153, 1003
AvrII CCTAGG 1 cut(s) 1274
BaeGI GKGCMC 1 cut(s) 31
BarI GAAGNNNNNNTAC 2 cut(s) 463, 495
BbsI GAAGAC 1 cut(s) 1278
Bbv12I GWGCWC 2 cut(s) 31, 1116
BbvCI CCTCAGC 1 cut(s) 131
BbvI GCAGC 2 cut(s) 46, 620
BccI CCATC 5 cut(s) 389, 737, 782, 1236, 1263
BciVI GTATCC 1 cut(s) 363
BclI TGATCA 2 cut(s) 274, 1056
BcuI ACTAGT 1 cut(s) 191
BfaI CTAG 6 cut(s) 192, 588, 845, 1064, 1133, 1275
BfmI CTRYAG 1 cut(s) 657
BfuAI ACCTGC 1 cut(s) 491
BfuI GTATCC 1 cut(s) 363
BglI GCCNNNNNGGC 1 cut(s) 386
BglII AGATCT 1 cut(s) 16
BisI GCNGC 4 cut(s) 60, 378, 634, 1037
BlnI CCTAGG 1 cut(s) 1274
BlsI GCNGC 4 cut(s) 61, 379, 635, 1038
Bme18I GGWCC 2 cut(s) 153, 1003
BmgBI CACGTC 1 cut(s) 1111
BmgT120I GGNCC 2 cut(s) 153, 1003
BmsI GCATC 2 cut(s) 823, 1233
BoxI GACNNNNGTC 1 cut(s) 158
BpiI GAAGAC 1 cut(s) 1278
BpmI CTGGAG 2 cut(s) 816, 1280
Bpu10I CCTNAGC 1 cut(s) 131
Bpu14I TTCGAA 1 cut(s) 459
BpuEI CTTGAG 1 cut(s) 551
Bsa29I ATCGAT 1 cut(s) 831
BsaAI YACGTR 1 cut(s) 374
BsaBI GATNNNNATC 1 cut(s) 249
BsaJI CCNNGG 1 cut(s) 1274
BsaWI WCCGGW 1 cut(s) 150
BsaXI ACNNNNNCTCC 4 cut(s) 111, 141, 887, 917
Bsc4I CCNNNNNNNGG 1 cut(s) 61
Bse1I ACTGG 1 cut(s) 498
Bse3DI GCAATG 1 cut(s) 1184
Bse8I GATNNNNATC 1 cut(s) 249
BseAI TCCGGA 1 cut(s) 150
BseCI ATCGAT 1 cut(s) 831
BseDI CCNNGG 1 cut(s) 1274
BseGI GGATG 3 cut(s) 775, 1247, 1255
BseJI GATNNNNATC 1 cut(s) 249
BseLI CCNNNNNNNGG 1 cut(s) 61
BseMI GCAATG 1 cut(s) 1184
BseMII CTCAG 3 cut(s) 145, 603, 957
BseNI ACTGG 1 cut(s) 498
BseRI GAGGAG 1 cut(s) 119
BseSI GKGCMC 1 cut(s) 31
BseXI GCAGC 2 cut(s) 46, 620
BsgI GTGCAG 1 cut(s) 687
Bsh1236I CGCG 3 cut(s) 13, 294, 1422
BshFI GGCC 2 cut(s) 287, 608
BshVI ATCGAT 1 cut(s) 831
BsiHKAI GWGCWC 2 cut(s) 31, 1116
BsiSI CCGG 1 cut(s) 151
BslI CCNNNNNNNGG 1 cut(s) 61
BsmI GAATGC 1 cut(s) 1416
BsnI GGCC 2 cut(s) 287, 608
Bsp119I TTCGAA 1 cut(s) 459
Bsp1286I GDGCHC 2 cut(s) 31, 1116
Bsp13I TCCGGA 1 cut(s) 150
Bsp143I GATC 5 cut(s) 16, 84, 274, 361, 1056
BspACI CCGC 7 cut(s) 62, 378, 715, 783, 863, 1037, 1422
BspANI GGCC 2 cut(s) 287, 608
BspCNI CTCAG 3 cut(s) 144, 604, 958
BspDI ATCGAT 1 cut(s) 831
BspEI TCCGGA 1 cut(s) 150
BspFNI CGCG 3 cut(s) 13, 294, 1422
BspMI ACCTGC 1 cut(s) 491
BspT104I TTCGAA 1 cut(s) 459
BsrDI GCAATG 1 cut(s) 1184
BsrI ACTGG 1 cut(s) 498
BssECI CCNNGG 1 cut(s) 1274
BssMI GATC 5 cut(s) 16, 84, 274, 361, 1056
BssT1I CCWWGG 1 cut(s) 1274
Bst4CI ACNGT 2 cut(s) 160, 959
Bst6I CTCTTC 2 cut(s) 540, 642
BstBAI YACGTR 1 cut(s) 374
BstBI TTCGAA 1 cut(s) 459
BstC8I GCNNGC 3 cut(s) 949, 1104, 1222
BstDEI CTNAG 6 cut(s) 131, 168, 612, 907, 966, 1147
BstF5I GGATG 3 cut(s) 775, 1247, 1255
BstFNI CGCG 3 cut(s) 13, 294, 1422
BstHHI GCGC 1 cut(s) 953
BstKTI GATC 5 cut(s) 19, 87, 277, 364, 1059
BstMBI GATC 5 cut(s) 16, 84, 274, 361, 1056
BstMWI GCNNNNNNNGC 2 cut(s) 386, 1033
BstNSI RCATGY 3 cut(s) 223, 1043, 1470
BstPAI GACNNNNGTC 1 cut(s) 158
BstSFI CTRYAG 1 cut(s) 657
BstSLI GKGCMC 1 cut(s) 31
BstUI CGCG 3 cut(s) 13, 294, 1422
BstV1I GCAGC 2 cut(s) 46, 620
BstV2I GAAGAC 1 cut(s) 1278
BstX2I RGATCY 1 cut(s) 16
BstYI RGATCY 1 cut(s) 16
Bsu15I ATCGAT 1 cut(s) 831
BsuI GTATCC 1 cut(s) 363
BsuRI GGCC 2 cut(s) 287, 608
BsuTUI ATCGAT 1 cut(s) 831
BtrI CACGTC 1 cut(s) 1111
BtsCI GGATG 3 cut(s) 775, 1247, 1255
BtsI GCAGTG 1 cut(s) 1356
BtsIMutI CAGTG 5 cut(s) 94, 424, 491, 1328, 1356
BveI ACCTGC 1 cut(s) 491
Cac8I GCNNGC 3 cut(s) 949, 1104, 1222
CaiI CAGNNNCTG 1 cut(s) 1016
CfoI GCGC 1 cut(s) 953
Cfr13I GGNCC 2 cut(s) 153, 1003
ClaI ATCGAT 1 cut(s) 831
CseI GACGC 2 cut(s) 440, 979
Csp6I GTAC 1 cut(s) 641
CviAII CATG 7 cut(s) 32, 220, 240, 941, 1000, 1040, 1467
CviQI GTAC 1 cut(s) 641
DdeI CTNAG 6 cut(s) 131, 168, 612, 907, 966, 1147
DpnI GATC 5 cut(s) 18, 86, 276, 363, 1058
DpnII GATC 5 cut(s) 16, 84, 274, 361, 1056
Eam1104I CTCTTC 2 cut(s) 540, 642
EarI CTCTTC 2 cut(s) 540, 642
EciI GGCGGA 1 cut(s) 798
Eco130I CCWWGG 1 cut(s) 1274
Eco47I GGWCC 2 cut(s) 153, 1003
EcoT14I CCWWGG 1 cut(s) 1274
ErhI CCWWGG 1 cut(s) 1274
FaeI CATG 7 cut(s) 35, 223, 243, 944, 1003, 1043, 1470
FatI CATG 7 cut(s) 31, 219, 239, 940, 999, 1039, 1466
FauI CCCGC 1 cut(s) 856
FbaI TGATCA 2 cut(s) 274, 1056
Fnu4HI GCNGC 4 cut(s) 60, 378, 634, 1037
FokI GGATG 3 cut(s) 782, 1242, 1254
Fsp4HI GCNGC 4 cut(s) 60, 378, 634, 1037
FspBI CTAG 6 cut(s) 192, 588, 845, 1064, 1133, 1275
GlaI GCGC 1 cut(s) 952
GluI GCNGC 4 cut(s) 60, 378, 634, 1037
GsuI CTGGAG 2 cut(s) 816, 1280
HaeIII GGCC 2 cut(s) 287, 608
HapII CCGG 1 cut(s) 151
HgaI GACGC 2 cut(s) 440, 979
HhaI GCGC 1 cut(s) 953
Hin1II CATG 7 cut(s) 35, 223, 243, 944, 1003, 1043, 1470
Hin6I GCGC 1 cut(s) 951
HinP1I GCGC 1 cut(s) 951
HincII GTYRAC 2 cut(s) 654, 879
HindII GTYRAC 2 cut(s) 654, 879
HindIII AAGCTT 2 cut(s) 774, 945
HpaII CCGG 1 cut(s) 151
HphI GGTGA 4 cut(s) 446, 520, 1382, 1399
Hpy166II GTNNAC 5 cut(s) 29, 189, 437, 654, 879
Hpy188I TCNGA 7 cut(s) 314, 517, 601, 613, 739, 769, 995
Hpy188III TCNNGA 6 cut(s) 151, 795, 1016, 1133, 1170, 1297
Hpy8I GTNNAC 5 cut(s) 29, 189, 437, 654, 879
Hpy99I CGWCG 1 cut(s) 1112
HpyAV CCTTC 6 cut(s) 59, 499, 584, 656, 1232, 1261
HpyCH4III ACNGT 2 cut(s) 160, 959
HpyCH4IV ACGT 4 cut(s) 25, 373, 881, 1110
HpyCH4V TGCA 7 cut(s) 29, 486, 704, 819, 1157, 1220, 1427
HpyF10VI GCNNNNNNNGC 2 cut(s) 386, 1033
HpyF3I CTNAG 6 cut(s) 131, 168, 612, 907, 966, 1147
HpySE526I ACGT 4 cut(s) 25, 373, 881, 1110
Hsp92II CATG 7 cut(s) 35, 223, 243, 944, 1003, 1043, 1470
HspAI GCGC 1 cut(s) 951
Kpn2I TCCGGA 1 cut(s) 150
Ksp22I TGATCA 2 cut(s) 274, 1056
Kzo9I GATC 5 cut(s) 16, 84, 274, 361, 1056
LmnI GCTCC 2 cut(s) 1018, 1299
Lsp1109I GCAGC 2 cut(s) 46, 620
LweI GCATC 2 cut(s) 823, 1233
MaeI CTAG 6 cut(s) 192, 588, 845, 1064, 1133, 1275
MaeII ACGT 4 cut(s) 25, 373, 881, 1110
MaeIII GTNAC 1 cut(s) 93
MalI GATC 5 cut(s) 18, 86, 276, 363, 1058
MboI GATC 5 cut(s) 16, 84, 274, 361, 1056
MflI RGATCY 1 cut(s) 16
MhlI GDGCHC 2 cut(s) 31, 1116
MluCI AATT 8 cut(s) 462, 595, 688, 710, 755, 820, 981, 1051
MlyI GAGTC 2 cut(s) 290, 437
MmeI TCCRAC 1 cut(s) 347
MnlI CCTC 8 cut(s) 140, 165, 477, 607, 619, 862, 913, 1166
MroI TCCGGA 1 cut(s) 150
MseI TTAA 3 cut(s) 1023, 1077, 1361
MspI CCGG 1 cut(s) 151
Mva1269I GAATGC 1 cut(s) 1416
MvnI CGCG 3 cut(s) 13, 294, 1422
MwoI GCNNNNNNNGC 2 cut(s) 386, 1033
NdeII GATC 5 cut(s) 16, 84, 274, 361, 1056
NlaIII CATG 7 cut(s) 35, 223, 243, 944, 1003, 1043, 1470
NspI RCATGY 3 cut(s) 223, 1043, 1470
NspV TTCGAA 1 cut(s) 459
PciI ACATGT 2 cut(s) 219, 1466
PcsI WCGNNNNNNNCGW 2 cut(s) 267, 370
PctI GAATGC 1 cut(s) 1416
PfeI GAWTC 8 cut(s) 38, 106, 602, 764, 1181, 1199, 1247, 1317
PkrI GCNGC 4 cut(s) 61, 379, 635, 1038
PleI GAGTC 2 cut(s) 290, 437
PpsI GAGTC 2 cut(s) 290, 437
Ppu21I YACGTR 1 cut(s) 374
PscI ACATGT 2 cut(s) 219, 1466
PshAI GACNNNNGTC 1 cut(s) 158
PspPI GGNCC 2 cut(s) 153, 1003
PstNI CAGNNNCTG 1 cut(s) 1016
PsuI RGATCY 1 cut(s) 16
RsaI GTAC 1 cut(s) 642
RsaNI GTAC 1 cut(s) 641
SaqAI TTAA 3 cut(s) 1023, 1077, 1361
SatI GCNGC 4 cut(s) 60, 378, 634, 1037
Sau3AI GATC 5 cut(s) 16, 84, 274, 361, 1056
Sau96I GGNCC 2 cut(s) 153, 1003
SchI GAGTC 2 cut(s) 290, 437
SduI GDGCHC 2 cut(s) 31, 1116
SfaNI GCATC 2 cut(s) 823, 1233
SfcI CTRYAG 1 cut(s) 657
SfuI TTCGAA 1 cut(s) 459
SinI GGWCC 2 cut(s) 153, 1003
SmlI CTYRAG 1 cut(s) 566
SmoI CTYRAG 1 cut(s) 566
SpeI ACTAGT 1 cut(s) 191
Sse9I AATT 8 cut(s) 462, 595, 688, 710, 755, 820, 981, 1051
SsiI CCGC 7 cut(s) 62, 378, 715, 783, 863, 1037, 1422
SspMI CTAG 6 cut(s) 192, 588, 845, 1064, 1133, 1275
StyI CCWWGG 1 cut(s) 1274
TaaI ACNGT 2 cut(s) 160, 959
TaiI ACGT 4 cut(s) 28, 376, 884, 1113
TaqI TCGA 5 cut(s) 216, 336, 459, 469, 831
TasI AATT 8 cut(s) 462, 595, 688, 710, 755, 820, 981, 1051
TatI WGTACW 1 cut(s) 640
TauI GCSGC 2 cut(s) 380, 1039
TfiI GAWTC 8 cut(s) 38, 106, 602, 764, 1181, 1199, 1247, 1317
Tru1I TTAA 3 cut(s) 1023, 1077, 1361
Tru9I TTAA 3 cut(s) 1023, 1077, 1361
TscAI CASTG 5 cut(s) 94, 424, 498, 1335, 1356
TseI GCWGC 2 cut(s) 59, 633
TspGWI ACGGA 2 cut(s) 221, 617
TspRI CASTG 5 cut(s) 94, 424, 498, 1335, 1356
VneI GTGCAC 1 cut(s) 27
VpaK11BI GGWCC 2 cut(s) 153, 1003
XapI RAATTY 4 cut(s) 462, 688, 755, 981
XbaI TCTAGA 1 cut(s) 1132
XceI RCATGY 3 cut(s) 223, 1043, 1470
XmaJI CCTAGG 1 cut(s) 1274
XspI CTAG 6 cut(s) 192, 588, 845, 1064, 1133, 1275
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.