LRR-repeat protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 702, 843 |
| AccIII | TCCGGA | 1 cut(s) | 556 |
| AciI | CCGC | 1 cut(s) | 500 |
| AclWI | GGATC | 4 cut(s) | 228, 341, 548, 689 |
| AcsI | RAATTY | 4 cut(s) | 294, 469, 787, 1295 |
| AcuI | CTGAAG | 2 cut(s) | 467, 920 |
| AdeI | CACNNNGTG | 1 cut(s) | 101 |
| AfaI | GTAC | 3 cut(s) | 990, 1017, 1211 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 503, 556 |
| AflII | CTTAAG | 1 cut(s) | 521 |
| AflIII | ACRYGT | 2 cut(s) | 141, 1212 |
| AjnI | CCWGG | 1 cut(s) | 502 |
| AluBI | AGCT | 6 cut(s) | 283, 736, 761, 872, 877, 985 |
| AluI | AGCT | 6 cut(s) | 283, 736, 761, 872, 877, 985 |
| AlwI | GGATC | 4 cut(s) | 228, 341, 548, 689 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1124 |
| Aor13HI | TCCGGA | 1 cut(s) | 556 |
| AoxI | GGCC | 2 cut(s) | 796, 1258 |
| ApeKI | GCWGC | 3 cut(s) | 585, 761, 1027 |
| ApoI | RAATTY | 4 cut(s) | 294, 469, 787, 1295 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 103, 135 |
| AseI | ATTAAT | 1 cut(s) | 723 |
| AspLEI | GCGC | 1 cut(s) | 661 |
| AspS9I | GGNCC | 2 cut(s) | 111, 206 |
| AsuHPI | GGTGA | 1 cut(s) | 1032 |
| AvaII | GGWCC | 2 cut(s) | 111, 206 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1271, 1303 |
| BbsI | GAAGAC | 2 cut(s) | 373, 926 |
| BbvI | GCAGC | 3 cut(s) | 572, 748, 1014 |
| BccI | CCATC | 3 cut(s) | 126, 1189, 1269 |
| BceAI | ACGGC | 2 cut(s) | 329, 811 |
| BciT130I | CCWGG | 1 cut(s) | 504 |
| BciVI | GTATCC | 1 cut(s) | 498 |
| BclI | TGATCA | 1 cut(s) | 925 |
| BfaI | CTAG | 4 cut(s) | 164, 633, 1019, 1358 |
| BfmI | CTRYAG | 1 cut(s) | 306 |
| BfrI | CTTAAG | 1 cut(s) | 521 |
| BfuI | GTATCC | 1 cut(s) | 498 |
| BglII | AGATCT | 1 cut(s) | 1054 |
| BisI | GCNGC | 3 cut(s) | 586, 762, 1028 |
| BlpI | GCTNAGC | 1 cut(s) | 873 |
| BlsI | GCNGC | 3 cut(s) | 587, 763, 1029 |
| BmcAI | AGTACT | 1 cut(s) | 1017 |
| Bme1390I | CCNGG | 1 cut(s) | 504 |
| Bme18I | GGWCC | 2 cut(s) | 111, 206 |
| BmgT120I | GGNCC | 2 cut(s) | 111, 206 |
| BmiI | GGNNCC | 2 cut(s) | 208, 425 |
| BmrFI | CCNGG | 1 cut(s) | 504 |
| BmrI | ACTGGG | 1 cut(s) | 1018 |
| BmsI | GCATC | 1 cut(s) | 49 |
| BmuI | ACTGGG | 1 cut(s) | 1018 |
| BpiI | GAAGAC | 2 cut(s) | 373, 926 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 873 |
| BpuEI | CTTGAG | 2 cut(s) | 6, 617 |
| Bsa29I | ATCGAT | 1 cut(s) | 324 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1092 |
| BsaJI | CCNNGG | 4 cut(s) | 419, 503, 941, 1062 |
| BsaWI | WCCGGW | 1 cut(s) | 556 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 503, 556 |
| Bse1I | ACTGG | 2 cut(s) | 810, 1013 |
| Bse3DI | GCAATG | 1 cut(s) | 1097 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1092 |
| BseAI | TCCGGA | 1 cut(s) | 556 |
| BseBI | CCWGG | 1 cut(s) | 504 |
| BseCI | ATCGAT | 1 cut(s) | 324 |
| BseDI | CCNNGG | 4 cut(s) | 419, 503, 941, 1062 |
| BseGI | GGATG | 3 cut(s) | 266, 949, 1204 |
| BseJI | GATNNNNATC | 1 cut(s) | 1092 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 503, 556 |
| BseMI | GCAATG | 1 cut(s) | 1097 |
| BseMII | CTCAG | 3 cut(s) | 864, 1133, 1165 |
| BseNI | ACTGG | 2 cut(s) | 810, 1013 |
| BseRI | GAGGAG | 3 cut(s) | 483, 486, 614 |
| BseXI | GCAGC | 3 cut(s) | 572, 748, 1014 |
| BsgI | GTGCAG | 1 cut(s) | 322 |
| BshFI | GGCC | 2 cut(s) | 798, 1260 |
| BshVI | ATCGAT | 1 cut(s) | 324 |
| BsiSI | CCGG | 1 cut(s) | 557 |
| BslFI | GGGAC | 1 cut(s) | 192 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 503, 556 |
| BsmFI | GGGAC | 1 cut(s) | 192 |
| BsnI | GGCC | 2 cut(s) | 798, 1260 |
| Bsp13I | TCCGGA | 1 cut(s) | 556 |
| Bsp143I | GATC | 8 cut(s) | 220, 241, 333, 370, 553, 694, 925, 1054 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 873 |
| BspACI | CCGC | 1 cut(s) | 500 |
| BspANI | GGCC | 2 cut(s) | 798, 1260 |
| BspCNI | CTCAG | 3 cut(s) | 865, 1134, 1164 |
| BspDI | ATCGAT | 1 cut(s) | 324 |
| BspEI | TCCGGA | 1 cut(s) | 556 |
| BspHI | TCATGA | 2 cut(s) | 994, 1084 |
| BspLI | GGNNCC | 2 cut(s) | 208, 425 |
| BspPI | GGATC | 4 cut(s) | 228, 341, 548, 689 |
| BspTI | CTTAAG | 1 cut(s) | 521 |
| BsrDI | GCAATG | 1 cut(s) | 1097 |
| BsrI | ACTGG | 2 cut(s) | 810, 1013 |
| BssECI | CCNNGG | 4 cut(s) | 419, 503, 941, 1062 |
| BssMI | GATC | 8 cut(s) | 220, 241, 333, 370, 553, 694, 925, 1054 |
| BssT1I | CCWWGG | 2 cut(s) | 941, 1062 |
| Bst2UI | CCWGG | 1 cut(s) | 504 |
| Bst4CI | ACNGT | 3 cut(s) | 260, 861, 1209 |
| Bst6I | CTCTTC | 1 cut(s) | 159 |
| BstAFI | CTTAAG | 1 cut(s) | 521 |
| BstDEI | CTNAG | 4 cut(s) | 483, 873, 1142, 1151 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 501 |
| BstF5I | GGATG | 3 cut(s) | 266, 949, 1204 |
| BstHHI | GCGC | 1 cut(s) | 661 |
| BstKTI | GATC | 8 cut(s) | 223, 244, 336, 373, 556, 697, 928, 1057 |
| BstMBI | GATC | 8 cut(s) | 220, 241, 333, 370, 553, 694, 925, 1054 |
| BstNI | CCWGG | 1 cut(s) | 504 |
| BstNSI | RCATGY | 2 cut(s) | 145, 1216 |
| BstSCI | CCNGG | 1 cut(s) | 502 |
| BstSFI | CTRYAG | 1 cut(s) | 306 |
| BstV1I | GCAGC | 3 cut(s) | 572, 748, 1014 |
| BstV2I | GAAGAC | 2 cut(s) | 373, 926 |
| BstX2I | RGATCY | 2 cut(s) | 333, 1054 |
| BstYI | RGATCY | 2 cut(s) | 333, 1054 |
| Bsu15I | ATCGAT | 1 cut(s) | 324 |
| BsuI | GTATCC | 1 cut(s) | 498 |
| BsuRI | GGCC | 2 cut(s) | 798, 1260 |
| BsuTUI | ATCGAT | 1 cut(s) | 324 |
| BtsCI | GGATG | 3 cut(s) | 266, 949, 1204 |
| BtsI | GCAGTG | 1 cut(s) | 1029 |
| BtsIMutI | CAGTG | 3 cut(s) | 563, 628, 1029 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1124 |
| CciI | TCATGA | 2 cut(s) | 994, 1084 |
| CfoI | GCGC | 1 cut(s) | 661 |
| Cfr13I | GGNCC | 2 cut(s) | 111, 206 |
| ClaI | ATCGAT | 1 cut(s) | 324 |
| Csp6I | GTAC | 3 cut(s) | 989, 1016, 1210 |
| CviQI | GTAC | 3 cut(s) | 989, 1016, 1210 |
| DdeI | CTNAG | 4 cut(s) | 483, 873, 1142, 1151 |
| DpnI | GATC | 8 cut(s) | 222, 243, 335, 372, 555, 696, 927, 1056 |
| DpnII | GATC | 8 cut(s) | 220, 241, 333, 370, 553, 694, 925, 1054 |
| DraI | TTTAAA | 1 cut(s) | 783 |
| DraIII | CACNNNGTG | 1 cut(s) | 101 |
| Eam1104I | CTCTTC | 1 cut(s) | 159 |
| EarI | CTCTTC | 1 cut(s) | 159 |
| EciI | GGCGGA | 1 cut(s) | 489 |
| Eco130I | CCWWGG | 2 cut(s) | 941, 1062 |
| Eco32I | GATATC | 2 cut(s) | 646, 751 |
| Eco47I | GGWCC | 2 cut(s) | 111, 206 |
| Eco57I | CTGAAG | 2 cut(s) | 467, 920 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 501 |
| EcoO109I | RGGNCCY | 1 cut(s) | 206 |
| EcoRI | GAATTC | 1 cut(s) | 787 |
| EcoRII | CCWGG | 1 cut(s) | 502 |
| EcoRV | GATATC | 2 cut(s) | 646, 751 |
| EcoT14I | CCWWGG | 2 cut(s) | 941, 1062 |
| ErhI | CCWWGG | 2 cut(s) | 941, 1062 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 357, 389 |
| FaqI | GGGAC | 1 cut(s) | 192 |
| FbaI | TGATCA | 1 cut(s) | 925 |
| Fnu4HI | GCNGC | 3 cut(s) | 586, 762, 1028 |
| FokI | GGATG | 3 cut(s) | 253, 936, 1211 |
| Fsp4HI | GCNGC | 3 cut(s) | 586, 762, 1028 |
| FspBI | CTAG | 4 cut(s) | 164, 633, 1019, 1358 |
| GlaI | GCGC | 1 cut(s) | 660 |
| GluI | GCNGC | 3 cut(s) | 586, 762, 1028 |
| HaeIII | GGCC | 2 cut(s) | 798, 1260 |
| HapII | CCGG | 1 cut(s) | 557 |
| HhaI | GCGC | 1 cut(s) | 661 |
| Hin6I | GCGC | 1 cut(s) | 659 |
| HinP1I | GCGC | 1 cut(s) | 659 |
| HindIII | AAGCTT | 2 cut(s) | 281, 734 |
| HinfI | GANTC | 6 cut(s) | 185, 263, 560, 618, 1121, 1173 |
| HpaII | CCGG | 1 cut(s) | 557 |
| HphI | GGTGA | 1 cut(s) | 1032 |
| Hpy166II | GTNNAC | 3 cut(s) | 147, 579, 973 |
| Hpy188I | TCNGA | 5 cut(s) | 271, 388, 423, 447, 694 |
| Hpy188III | TCNNGA | 7 cut(s) | 164, 199, 229, 557, 914, 995, 1085 |
| Hpy8I | GTNNAC | 3 cut(s) | 147, 579, 973 |
| Hpy99I | CGWCG | 1 cut(s) | 235 |
| HpyAV | CCTTC | 3 cut(s) | 442, 1273, 1362 |
| HpyCH4III | ACNGT | 3 cut(s) | 260, 861, 1209 |
| HpyCH4IV | ACGT | 2 cut(s) | 233, 1230 |
| HpyCH4V | TGCA | 6 cut(s) | 50, 62, 128, 339, 398, 438 |
| HpyF3I | CTNAG | 4 cut(s) | 483, 873, 1142, 1151 |
| HpySE526I | ACGT | 2 cut(s) | 233, 1230 |
| HspAI | GCGC | 1 cut(s) | 659 |
| Kpn2I | TCCGGA | 1 cut(s) | 556 |
| Ksp22I | TGATCA | 1 cut(s) | 925 |
| Kzo9I | GATC | 8 cut(s) | 220, 241, 333, 370, 553, 694, 925, 1054 |
| LmnI | GCTCC | 1 cut(s) | 423 |
| Lsp1109I | GCAGC | 3 cut(s) | 572, 748, 1014 |
| LweI | GCATC | 1 cut(s) | 49 |
| MaeI | CTAG | 4 cut(s) | 164, 633, 1019, 1358 |
| MaeII | ACGT | 2 cut(s) | 233, 1230 |
| MaeIII | GTNAC | 3 cut(s) | 196, 882, 1226 |
| MalI | GATC | 8 cut(s) | 222, 243, 335, 372, 555, 696, 927, 1056 |
| MboI | GATC | 8 cut(s) | 220, 241, 333, 370, 553, 694, 925, 1054 |
| MboII | GAAGA | 6 cut(s) | 146, 365, 373, 682, 836, 926 |
| MflI | RGATCY | 2 cut(s) | 333, 1054 |
| MlyI | GAGTC | 2 cut(s) | 554, 1130 |
| MmeI | TCCRAC | 2 cut(s) | 294, 1324 |
| MroI | TCCGGA | 1 cut(s) | 556 |
| MseI | TTAA | 7 cut(s) | 276, 291, 522, 723, 782, 1077, 1217 |
| MspA1I | CMGCKG | 1 cut(s) | 761 |
| MspCI | CTTAAG | 1 cut(s) | 521 |
| MspI | CCGG | 1 cut(s) | 557 |
| MspR9I | CCNGG | 1 cut(s) | 504 |
| MvaI | CCWGG | 1 cut(s) | 504 |
| NdeII | GATC | 8 cut(s) | 220, 241, 333, 370, 553, 694, 925, 1054 |
| NlaIV | GGNNCC | 2 cut(s) | 208, 425 |
| NmuCI | GTSAC | 3 cut(s) | 196, 882, 1226 |
| NspI | RCATGY | 2 cut(s) | 145, 1216 |
| PagI | TCATGA | 2 cut(s) | 994, 1084 |
| PciI | ACATGT | 2 cut(s) | 141, 1212 |
| PfeI | GAWTC | 4 cut(s) | 185, 263, 618, 1173 |
| PkrI | GCNGC | 3 cut(s) | 587, 763, 1029 |
| PleI | GAGTC | 2 cut(s) | 554, 1129 |
| PpsI | GAGTC | 2 cut(s) | 554, 1129 |
| PpuMI | RGGWCCY | 1 cut(s) | 206 |
| PscI | ACATGT | 2 cut(s) | 141, 1212 |
| PshBI | ATTAAT | 1 cut(s) | 723 |
| PsiI | TTATAA | 2 cut(s) | 702, 843 |
| Psp5II | RGGWCCY | 1 cut(s) | 206 |
| Psp6I | CCWGG | 1 cut(s) | 502 |
| PspGI | CCWGG | 1 cut(s) | 502 |
| PspN4I | GGNNCC | 2 cut(s) | 208, 425 |
| PspPI | GGNCC | 2 cut(s) | 111, 206 |
| PspPPI | RGGWCCY | 1 cut(s) | 206 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1124 |
| PsuI | RGATCY | 2 cut(s) | 333, 1054 |
| PvuII | CAGCTG | 1 cut(s) | 761 |
| RsaI | GTAC | 3 cut(s) | 990, 1017, 1211 |
| RsaNI | GTAC | 3 cut(s) | 989, 1016, 1210 |
| SaqAI | TTAA | 7 cut(s) | 276, 291, 522, 723, 782, 1077, 1217 |
| SatI | GCNGC | 3 cut(s) | 586, 762, 1028 |
| Sau3AI | GATC | 8 cut(s) | 220, 241, 333, 370, 553, 694, 925, 1054 |
| Sau96I | GGNCC | 2 cut(s) | 111, 206 |
| ScaI | AGTACT | 1 cut(s) | 1017 |
| SchI | GAGTC | 2 cut(s) | 554, 1130 |
| ScrFI | CCNGG | 1 cut(s) | 504 |
| SfaNI | GCATC | 1 cut(s) | 49 |
| SfcI | CTRYAG | 1 cut(s) | 306 |
| SinI | GGWCC | 2 cut(s) | 111, 206 |
| SmlI | CTYRAG | 3 cut(s) | 21, 521, 596 |
| SmoI | CTYRAG | 3 cut(s) | 21, 521, 596 |
| SsiI | CCGC | 1 cut(s) | 500 |
| SspMI | CTAG | 4 cut(s) | 164, 633, 1019, 1358 |
| StyD4I | CCNGG | 1 cut(s) | 502 |
| StyI | CCWWGG | 2 cut(s) | 941, 1062 |
| TaaI | ACNGT | 3 cut(s) | 260, 861, 1209 |
| TaiI | ACGT | 2 cut(s) | 236, 1233 |
| TaqI | TCGA | 1 cut(s) | 324 |
| TatI | WGTACW | 2 cut(s) | 1015, 1209 |
| TfiI | GAWTC | 4 cut(s) | 185, 263, 618, 1173 |
| Tru1I | TTAA | 7 cut(s) | 276, 291, 522, 723, 782, 1077, 1217 |
| Tru9I | TTAA | 7 cut(s) | 276, 291, 522, 723, 782, 1077, 1217 |
| TscAI | CASTG | 3 cut(s) | 570, 628, 1029 |
| TseFI | GTSAC | 3 cut(s) | 196, 882, 1226 |
| TseI | GCWGC | 3 cut(s) | 585, 761, 1027 |
| Tsp45I | GTSAC | 3 cut(s) | 196, 882, 1226 |
| TspRI | CASTG | 3 cut(s) | 570, 628, 1029 |
| Vha464I | CTTAAG | 1 cut(s) | 521 |
| VpaK11BI | GGWCC | 2 cut(s) | 111, 206 |
| VspI | ATTAAT | 1 cut(s) | 723 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 501 |
| XapI | RAATTY | 4 cut(s) | 294, 469, 787, 1295 |
| XbaI | TCTAGA | 1 cut(s) | 163 |
| XceI | RCATGY | 2 cut(s) | 145, 1216 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1104 |
| XspI | CTAG | 4 cut(s) | 164, 633, 1019, 1358 |
| ZrmI | AGTACT | 1 cut(s) | 1017 |