Rh5AG198200

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0000079
Physical Location & Seq
Reverse (-)
23373788 .. 23375530
1743 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG198200.1

Sequence Viewer

Length: 1317 bp
ATGAGAGATAGGATAAGTGCATTACCAGATGCACTTCTTTCTCGCATACTCTCTTTCCTGCCAACACCATGTGCTGTGAGGACCAGCATTTTGTCTGTAAGATGGAGGAACATGTGGACTTCTCTTCCCAATCTAGAGTTTGATGACGTAAGAGATTCATTTGATGTCCCGATAGGTCCCAATGACAAGATTACTTTTACGACGTTTGTTGATCGTGTATTTCTATACCGTGATTCATCCGAAATTAAAAAGCTTGGTCTTAAAATATTGTATTCTAAAAATTTTTCTGGTATCAATAATTGGATTTGCACAGCCGTTTGGCGTAATGTTGTTGAAATTGATCTTTGTCTCTCTTGTCAAGAAGAGGATTTTCAGTTCCCCCAGAGCCTTTTCATGTGCAAAACTCTGAAGGTTTTTAAATTGTATTCAAATCTTAGGACCATTAAGTATCCTCCTCCTCTTCCAGGGAGTTTTCCAAACCTTAAGTTCCTCCATGTTGAATTTGATTATCCGGATCCGGACTCACTGAAACTTTTGTCTACTCGCTGCCCTATGCTTGAAGAGTTGGCTATATTTGGATCAATTGAGTTTGGCGCTGTTTGTGATATCAACGTATTTGCGCCTGAATTGAAGAAGTTGAGTATAGGTGTGCATGATCTTGATGGGAACTGCAATTTTTCTATTAATGCCCCAAAGCTTGAATACATTGATATCGAGGCAGCTTGTCTATCAAGTTATTATTTGGAAAATGCAAACGGCCTAGTCACTGCCAGTGTTTTGTATTATGGAGTTGAAGAAGAATACGAACGGTTCTTTCTCAACCGTTTAGCTGCGCTTCTGTCACAAATAACAAATGTCAATCATCTCTCTCTTGACATTTGTGATCCTTGTCTTGAGGTTTGGTATCATCCTTTTTGTTTCAGTAATTTGAACCAAATGAAGCTGGTACTTCGTGATTCCCATTACTGGGAAGTACTAGCACTGCTGCTCACAAAATCACCTAAACTCGTAAATCTTACCTTAGTTGATAGTATTATGTTTCCTGATGATGAGCATTCATTGCCACAATGGGAGCAGCCAGAGTCTGTTCCTGTTTGTTTGTTGAGAAACCTCAGCACCATCACCATAAAGGGGTTTAGGGGTCATCAGGGTGAGATGGATGTAGCACGGTACATGTTAAAGAACGGTCATGTTTTGAATAAGATGACAATCTACACTGACTTCACAGGCCGTCCGTATAAAAAGGAGAAGGAGCTATACAAGGAATTTTTGATGTTTGAAAGGCTTTCGATGACTTGTAAAGTTGAATTTATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

438

Amino Acids

50.61

Weight (kDa)

5.52

Isoelectric Point (pI)

36.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 5 - 45 1.6e-06 F-box domain
LRR_At1g61320_AtMIF1 PF23622 81 - 407 2.4e-12 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 99 - 237 1.5e-08 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 359 - 404 3e-15 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 539
AccIII TCCGGA 2 cut(s) 511, 517
AclWI GGATC 4 cut(s) 509, 522, 586, 878
AcsI RAATTY 4 cut(s) 280, 500, 1265, 1307
AcuI CTGAAG 1 cut(s) 428
AdeI CACNNNGTG 1 cut(s) 71
AfaI GTAC 3 cut(s) 948, 975, 1172
AfiI CCNNNNNNNGG 4 cut(s) 464, 966, 967, 1131
AflII CTTAAG 1 cut(s) 482
AflIII ACRYGT 2 cut(s) 111, 1173
AjnI CCWGG 1 cut(s) 463
AloI GAACNNNNNNTCC 2 cut(s) 359, 391
AluBI AGCT 6 cut(s) 253, 697, 722, 830, 943, 1255
AluI AGCT 6 cut(s) 253, 697, 722, 830, 943, 1255
Alw26I GTCTC 1 cut(s) 353
AlwI GGATC 4 cut(s) 509, 522, 586, 878
AlwNI CAGNNNCTG 1 cut(s) 1085
Aor13HI TCCGGA 2 cut(s) 511, 517
AoxI GGCC 2 cut(s) 757, 1228
ApeKI GCWGC 5 cut(s) 546, 719, 830, 985, 1075
ApoI RAATTY 4 cut(s) 280, 500, 1265, 1307
ArsI GACNNNNNNTTYG 2 cut(s) 73, 105
AseI ATTAAT 1 cut(s) 684
AspLEI GCGC 3 cut(s) 596, 622, 835
AspS9I GGNCC 3 cut(s) 81, 176, 438
AsuHPI GGTGA 3 cut(s) 990, 1114, 1163
AvaII GGWCC 3 cut(s) 81, 176, 438
BamHI GGATCC 1 cut(s) 514
BarI GAAGNNNNNNTAC 2 cut(s) 1241, 1273
BbvCI CCTCAGC 1 cut(s) 1112
BbvI GCAGC 5 cut(s) 533, 731, 817, 972, 1087
BccI CCATC 4 cut(s) 96, 656, 1127, 1150
BceAI ACGGC 3 cut(s) 299, 772, 1215
BciT130I CCWGG 1 cut(s) 465
BciVI GTATCC 1 cut(s) 459
BcoDI GTCTC 1 cut(s) 353
BfaI CTAG 3 cut(s) 134, 761, 977
BfoI RGCGCY 1 cut(s) 597
BfrI CTTAAG 1 cut(s) 482
BfuI GTATCC 1 cut(s) 459
BisI GCNGC 5 cut(s) 547, 720, 831, 986, 1076
BlsI GCNGC 5 cut(s) 548, 721, 832, 987, 1077
BmcAI AGTACT 1 cut(s) 975
Bme1390I CCNGG 1 cut(s) 465
Bme18I GGWCC 3 cut(s) 81, 176, 438
BmgT120I GGNCC 3 cut(s) 81, 176, 438
BmiI GGNNCC 2 cut(s) 178, 516
BmrFI CCNGG 1 cut(s) 465
BmrI ACTGGG 1 cut(s) 976
BmsI GCATC 1 cut(s) 19
BmuI ACTGGG 1 cut(s) 976
Bpu10I CCTNAGC 1 cut(s) 1112
BpuEI CTTGAG 1 cut(s) 914
BsaBI GATNNNNATC 1 cut(s) 1208
BsaJI CCNNGG 1 cut(s) 464
BsaWI WCCGGW 2 cut(s) 511, 517
Bsc4I CCNNNNNNNGG 4 cut(s) 464, 966, 967, 1131
Bse1I ACTGG 2 cut(s) 771, 971
Bse3DI GCAATG 1 cut(s) 1058
Bse8I GATNNNNATC 1 cut(s) 1208
BseAI TCCGGA 2 cut(s) 511, 517
BseBI CCWGG 1 cut(s) 465
BseDI CCNNGG 1 cut(s) 464
BseGI GGATG 3 cut(s) 236, 907, 1165
BseJI GATNNNNATC 1 cut(s) 1208
BseLI CCNNNNNNNGG 4 cut(s) 464, 966, 967, 1131
BseMI GCAATG 1 cut(s) 1058
BseMII CTCAG 1 cut(s) 1126
BseNI ACTGG 2 cut(s) 771, 971
BseRI GAGGAG 2 cut(s) 444, 447
BseXI GCAGC 5 cut(s) 533, 731, 817, 972, 1087
BshFI GGCC 2 cut(s) 759, 1230
BsiSI CCGG 2 cut(s) 512, 518
BslFI GGGAC 2 cut(s) 152, 162
BslI CCNNNNNNNGG 4 cut(s) 464, 966, 967, 1131
BsmAI GTCTC 1 cut(s) 353
BsmFI GGGAC 2 cut(s) 152, 162
BsmI GAATGC 1 cut(s) 1054
BsnI GGCC 2 cut(s) 759, 1230
Bsp13I TCCGGA 2 cut(s) 511, 517
Bsp143I GATC 6 cut(s) 211, 340, 514, 578, 655, 883
BspANI GGCC 2 cut(s) 759, 1230
BspCNI CTCAG 1 cut(s) 1125
BspEI TCCGGA 2 cut(s) 511, 517
BspLI GGNNCC 2 cut(s) 178, 516
BspPI GGATC 4 cut(s) 509, 522, 586, 878
BspTI CTTAAG 1 cut(s) 482
BsrDI GCAATG 1 cut(s) 1058
BsrI ACTGG 2 cut(s) 771, 971
BssECI CCNNGG 1 cut(s) 464
BssMI GATC 6 cut(s) 211, 340, 514, 578, 655, 883
Bst2UI CCWGG 1 cut(s) 465
Bst4CI ACNGT 5 cut(s) 230, 810, 824, 1170, 1187
Bst6I CTCTTC 4 cut(s) 129, 357, 465, 555
BstAFI CTTAAG 1 cut(s) 482
BstAPI GCANNNNNTGC 1 cut(s) 1060
BstDEI CTNAG 3 cut(s) 434, 1021, 1112
BstENI CCTNNNNNAGG 1 cut(s) 462
BstF5I GGATG 3 cut(s) 236, 907, 1165
BstH2I RGCGCY 1 cut(s) 597
BstHHI GCGC 3 cut(s) 596, 622, 835
BstKTI GATC 6 cut(s) 214, 343, 517, 581, 658, 886
BstMAI GTCTC 1 cut(s) 353
BstMBI GATC 6 cut(s) 211, 340, 514, 578, 655, 883
BstMWI GCNNNNNNNGC 1 cut(s) 1060
BstNI CCWGG 1 cut(s) 465
BstNSI RCATGY 2 cut(s) 115, 1177
BstSCI CCNGG 1 cut(s) 463
BstV1I GCAGC 5 cut(s) 533, 731, 817, 972, 1087
BstX2I RGATCY 1 cut(s) 514
BstYI RGATCY 1 cut(s) 514
BsuI GTATCC 1 cut(s) 459
BsuRI GGCC 2 cut(s) 759, 1230
BtsCI GGATG 3 cut(s) 236, 907, 1165
BtsI GCAGTG 2 cut(s) 765, 980
BtsIMutI CAGTG 5 cut(s) 524, 765, 778, 980, 1215
CaiI CAGNNNCTG 1 cut(s) 1085
CfoI GCGC 3 cut(s) 596, 622, 835
Cfr13I GGNCC 3 cut(s) 81, 176, 438
Csp6I GTAC 3 cut(s) 947, 974, 1171
CviAII CATG 7 cut(s) 69, 112, 394, 494, 653, 1174, 1190
CviQI GTAC 3 cut(s) 947, 974, 1171
DdeI CTNAG 3 cut(s) 434, 1021, 1112
DpnI GATC 6 cut(s) 213, 342, 516, 580, 657, 885
DpnII GATC 6 cut(s) 211, 340, 514, 578, 655, 883
DraI TTTAAA 1 cut(s) 418
DraIII CACNNNGTG 1 cut(s) 71
Eam1104I CTCTTC 4 cut(s) 129, 357, 465, 555
EarI CTCTTC 4 cut(s) 129, 357, 465, 555
Eco32I GATATC 2 cut(s) 607, 712
Eco47I GGWCC 3 cut(s) 81, 176, 438
Eco57I CTGAAG 1 cut(s) 428
EcoNI CCTNNNNNAGG 1 cut(s) 462
EcoO109I RGGNCCY 1 cut(s) 176
EcoRII CCWGG 1 cut(s) 463
EcoRV GATATC 2 cut(s) 607, 712
FaeI CATG 7 cut(s) 72, 115, 397, 497, 656, 1177, 1193
FaqI GGGAC 2 cut(s) 152, 162
FatI CATG 7 cut(s) 68, 111, 393, 493, 652, 1173, 1189
FblI GTMKAC 1 cut(s) 539
Fnu4HI GCNGC 5 cut(s) 547, 720, 831, 986, 1076
FokI GGATG 3 cut(s) 223, 894, 1172
Fsp4HI GCNGC 5 cut(s) 547, 720, 831, 986, 1076
FspBI CTAG 3 cut(s) 134, 761, 977
GlaI GCGC 3 cut(s) 595, 621, 834
GluI GCNGC 5 cut(s) 547, 720, 831, 986, 1076
HaeII RGCGCY 1 cut(s) 597
HaeIII GGCC 2 cut(s) 759, 1230
HapII CCGG 2 cut(s) 512, 518
HhaI GCGC 3 cut(s) 596, 622, 835
Hin1II CATG 7 cut(s) 72, 115, 397, 497, 656, 1177, 1193
Hin6I GCGC 3 cut(s) 594, 620, 833
HinP1I GCGC 3 cut(s) 594, 620, 833
HindIII AAGCTT 2 cut(s) 251, 695
HinfI GANTC 5 cut(s) 155, 233, 521, 956, 1082
HpaII CCGG 2 cut(s) 512, 518
HphI GGTGA 3 cut(s) 990, 1114, 1163
Hpy166II GTNNAC 2 cut(s) 117, 540
Hpy188I TCNGA 2 cut(s) 241, 408
Hpy8I GTNNAC 2 cut(s) 117, 540
Hpy99I CGWCG 1 cut(s) 205
HpyAV CCTTC 2 cut(s) 403, 1243
HpyCH4III ACNGT 5 cut(s) 230, 810, 824, 1170, 1187
HpyCH4IV ACGT 3 cut(s) 147, 203, 612
HpyCH4V TGCA 7 cut(s) 20, 32, 309, 399, 652, 672, 752
HpyF10VI GCNNNNNNNGC 1 cut(s) 1060
HpyF3I CTNAG 3 cut(s) 434, 1021, 1112
HpySE526I ACGT 3 cut(s) 147, 203, 612
Hsp92II CATG 7 cut(s) 72, 115, 397, 497, 656, 1177, 1193
HspAI GCGC 3 cut(s) 594, 620, 833
Kpn2I TCCGGA 2 cut(s) 511, 517
Kzo9I GATC 6 cut(s) 211, 340, 514, 578, 655, 883
LmnI GCTCC 2 cut(s) 1072, 1252
Lsp1109I GCAGC 5 cut(s) 533, 731, 817, 972, 1087
LweI GCATC 1 cut(s) 19
MaeI CTAG 3 cut(s) 134, 761, 977
MaeII ACGT 3 cut(s) 147, 203, 612
MaeIII GTNAC 2 cut(s) 763, 840
MalI GATC 6 cut(s) 213, 342, 516, 580, 657, 885
MboI GATC 6 cut(s) 211, 340, 514, 578, 655, 883
MboII GAAGA 7 cut(s) 116, 374, 452, 572, 643, 806, 809
MfeI CAATTG 1 cut(s) 582
MflI RGATCY 1 cut(s) 514
MlyI GAGTC 2 cut(s) 515, 1091
MroI TCCGGA 2 cut(s) 511, 517
MseI TTAA 7 cut(s) 246, 261, 417, 444, 483, 684, 1178
MslI CAYNNNNRTG 1 cut(s) 1149
MspCI CTTAAG 1 cut(s) 482
MspI CCGG 2 cut(s) 512, 518
MspR9I CCNGG 1 cut(s) 465
MunI CAATTG 1 cut(s) 582
Mva1269I GAATGC 1 cut(s) 1054
MvaI CCWGG 1 cut(s) 465
MwoI GCNNNNNNNGC 1 cut(s) 1060
NdeII GATC 6 cut(s) 211, 340, 514, 578, 655, 883
NlaIII CATG 7 cut(s) 72, 115, 397, 497, 656, 1177, 1193
NlaIV GGNNCC 2 cut(s) 178, 516
NmuCI GTSAC 2 cut(s) 763, 840
NspI RCATGY 2 cut(s) 115, 1177
PciI ACATGT 2 cut(s) 111, 1173
PctI GAATGC 1 cut(s) 1054
PfeI GAWTC 3 cut(s) 155, 233, 956
PkrI GCNGC 5 cut(s) 548, 721, 832, 987, 1077
PleI GAGTC 2 cut(s) 515, 1090
PpsI GAGTC 2 cut(s) 515, 1090
PpuMI RGGWCCY 1 cut(s) 176
PscI ACATGT 2 cut(s) 111, 1173
PshBI ATTAAT 1 cut(s) 684
Psp5II RGGWCCY 1 cut(s) 176
Psp6I CCWGG 1 cut(s) 463
PspGI CCWGG 1 cut(s) 463
PspN4I GGNNCC 2 cut(s) 178, 516
PspPI GGNCC 3 cut(s) 81, 176, 438
PspPPI RGGWCCY 1 cut(s) 176
PstNI CAGNNNCTG 1 cut(s) 1085
PsuI RGATCY 1 cut(s) 514
RsaI GTAC 3 cut(s) 948, 975, 1172
RsaNI GTAC 3 cut(s) 947, 974, 1171
RseI CAYNNNNRTG 1 cut(s) 1149
SaqAI TTAA 7 cut(s) 246, 261, 417, 444, 483, 684, 1178
SatI GCNGC 5 cut(s) 547, 720, 831, 986, 1076
Sau3AI GATC 6 cut(s) 211, 340, 514, 578, 655, 883
Sau96I GGNCC 3 cut(s) 81, 176, 438
ScaI AGTACT 1 cut(s) 975
SchI GAGTC 2 cut(s) 515, 1091
ScrFI CCNGG 1 cut(s) 465
SfaNI GCATC 1 cut(s) 19
SinI GGWCC 3 cut(s) 81, 176, 438
SmiMI CAYNNNNRTG 1 cut(s) 1149
SmlI CTYRAG 2 cut(s) 482, 893
SmoI CTYRAG 2 cut(s) 482, 893
SspI AATATT 1 cut(s) 267
SspMI CTAG 3 cut(s) 134, 761, 977
StyD4I CCNGG 1 cut(s) 463
TaaI ACNGT 5 cut(s) 230, 810, 824, 1170, 1187
TaiI ACGT 3 cut(s) 150, 206, 615
TaqI TCGA 2 cut(s) 714, 1289
TatI WGTACW 1 cut(s) 973
TfiI GAWTC 3 cut(s) 155, 233, 956
Tru1I TTAA 7 cut(s) 246, 261, 417, 444, 483, 684, 1178
Tru9I TTAA 7 cut(s) 246, 261, 417, 444, 483, 684, 1178
TscAI CASTG 5 cut(s) 531, 772, 778, 987, 1222
TseFI GTSAC 2 cut(s) 763, 840
TseI GCWGC 5 cut(s) 546, 719, 830, 985, 1075
Tsp45I GTSAC 2 cut(s) 763, 840
TspDTI ATGAA 5 cut(s) 147, 225, 382, 953, 1047
TspGWI ACGGA 1 cut(s) 1224
TspRI CASTG 5 cut(s) 531, 772, 778, 987, 1222
Vha464I CTTAAG 1 cut(s) 482
VpaK11BI GGWCC 3 cut(s) 81, 176, 438
VspI ATTAAT 1 cut(s) 684
XagI CCTNNNNNAGG 1 cut(s) 462
XapI RAATTY 4 cut(s) 280, 500, 1265, 1307
XbaI TCTAGA 1 cut(s) 133
XceI RCATGY 2 cut(s) 115, 1177
XmiI GTMKAC 1 cut(s) 539
XspI CTAG 3 cut(s) 134, 761, 977
ZrmI AGTACT 1 cut(s) 975
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.