FvH4_5g02210

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000079
Physical Location & Seq
Reverse (-)
1365695 .. 1367863
2169 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g02210.t1

Sequence Viewer

Length: 1455 bp
ATGTCTTTAAGATCAAAGCTTCAAAAATTAAGAATTGAAGATAGGATTAGTGGGTTGCCAGATGCTATTCTTTGCCATATACTTTCCTTGTGTACAACCAGAGAGGCTGTGCAGACCAGTGTTTTATCTCACAGATGGAAGAATGTGTGGTCTTCTGTTCCCATTCTTGATTTGGATGAACAAAAGTATCACATGGATTATGTTAATCGTACTTTACCATCCCCACTAAGATATGTGGCAAGTAGTTTTGCACAGTTTGTGAATGGTCTACTTTCGTTACGTAGCCCCATAAACATTCATAGATTCCATCTCAAGACTACTATGACGTCTGATGCTTCTCTTATTTATGATTGGATTTCCACTGCTGTAAAGCAGAATGTTGTGGAACTTGATCTTTGTGTGGAGACACCTACAGAGCCACATTTTGAGATTCCGAGAAGCCTTTTCTTGTGTAACACATTGGTGAGTTTGAAGCTGTTGCTGTCTCAAGATGTTAGTGCTGTAACTCCCGGCGCAACATGCTTTCCTTGTCTTAAGTTCCTCCATGTTACAGTTTGGTGTCCTGATTCGGGCTCGATGGAGAAGCTCTTTTCTTGCTGCCCTGCACTTGAACATTTGATTTTAGATGGACAACTTGACGATGTGTCGGCTTATAATATAAATATCTCTGGACCTAAGCTGAAAAGGCTGCAGATTAGCTTCATTGTGCATAAGTTTGATACAAGATCTAGTAATGTTGTGAGTTATGATTGCCGAATATTTGTTAGTGCTGATGCTCCAAATCTTGAAGAGTTGGATATCTACTATGACTTGCTGGTGAGCTATTCTGTGAAGGATGCCAAATATCTGAGGAAAGCCAAGATAGATTTCTTAGATGTGGATGAGCTTCACAACCTTCATTGTTTCCTTGGCCTTGCTGGTCGTGTGCGCAGGCTCGTTGCAGGAATTGTTAATGTTAAATATCTGTCAGTTTCAGCTGCAATCTTGGGGGTTCTTGACATTAGAGATCATCATCTTCTGTCTACTTTAAATGATTTGAAGCACTTGGAGCTACAAGTTCAAACATGTTACTGTTTGCAGTCACTTCCAACTTTGCTCAACCTATCACCGAATTTGGAACATCTTGAGTTTGAAAATAACACCAAGTTTTGTGCTGATGACAATGAGGACGAGTTTGTTCACGGATGGGATGCACCAGAGTTGGTGCCTGTTTGTTTGTTTTCACACCTCAAGACTATATGCCTACGGGAGCTCAAGGGGTGTCCAAAGGAGATGGAAATGGCAAAGTACTTGGTGAAGCACGGCAAGGCTTTGAATAAGGTGACTATTTGTACTCGCTTTTGTGATGAAAAAGAGAAAAAGTTATTGCCTCCTATTGCCACCTTATGCTTGGAAGTTTCAAAGTTCCCTAGGGGTTCAAGGACTTGTGAAATTGATTTCCAGACTTTTACCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

485

Amino Acids

54.93

Weight (kDa)

6.41

Isoelectric Point (pI)

47.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 16 - 55 9.8e-07 F-box domain
LRR_At1g61320_AtMIF1 PF23622 94 - 445 9.5e-08 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 117 - 276 2.4e-16 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 400 - 443 2.6e-12 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 654
AatII GACGTC 1 cut(s) 329
Acc16I TGCGCA 1 cut(s) 929
AccB1I GGYRCC 1 cut(s) 1204
AccI GTMKAC 2 cut(s) 268, 1022
AcsI RAATTY 1 cut(s) 1111
AcyI GRCGYC 1 cut(s) 326
AfaI GTAC 4 cut(s) 94, 211, 1289, 1333
AfiI CCNNNNNNNGG 1 cut(s) 569
AflII CTTAAG 1 cut(s) 533
AflIII ACRYGT 1 cut(s) 1064
AhdI GACNNNNNGTC 1 cut(s) 643
AjuI GAANNNNNNNTTGG 2 cut(s) 851, 883
AleI CACNNNNGTG 1 cut(s) 461
Alw21I GWGCWC 1 cut(s) 1254
Alw26I GTCTC 2 cut(s) 398, 489
AoxI GGCC 1 cut(s) 910
ApeKI GCWGC 3 cut(s) 597, 688, 977
ApoI RAATTY 1 cut(s) 1111
AspA2I CCTAGG 1 cut(s) 1409
AspLEI GCGC 2 cut(s) 515, 930
AspS9I GGNCC 1 cut(s) 671
AsuC2I CCSGG 1 cut(s) 510
AsuHPI GGTGA 5 cut(s) 475, 829, 1098, 1306, 1333
AvaII GGWCC 1 cut(s) 671
AvrII CCTAGG 1 cut(s) 1409
BaeI ACNNNNGTAYC 2 cut(s) 170, 203
BanI GGYRCC 1 cut(s) 1204
BanII GRGCYC 2 cut(s) 575, 1254
BbsI GAAGAC 1 cut(s) 144
Bbv12I GWGCWC 1 cut(s) 1254
BbvI GCAGC 3 cut(s) 584, 675, 964
BccI CCATC 7 cut(s) 129, 226, 315, 571, 620, 1179, 1267
BceAI ACGGC 1 cut(s) 1318
BcnI CCSGG 1 cut(s) 510
BcoDI GTCTC 2 cut(s) 398, 489
BfaI CTAG 3 cut(s) 729, 1410, 1453
BfmI CTRYAG 2 cut(s) 411, 689
BfrI CTTAAG 1 cut(s) 533
BglII AGATCT 1 cut(s) 725
BisI GCNGC 3 cut(s) 598, 689, 978
BlnI CCTAGG 1 cut(s) 1409
BlsI GCNGC 3 cut(s) 599, 690, 979
BmcAI AGTACT 1 cut(s) 1289
Bme1390I CCNGG 1 cut(s) 510
Bme18I GGWCC 1 cut(s) 671
BmeRI GACNNNNNGTC 1 cut(s) 643
BmgT120I GGNCC 1 cut(s) 671
BmiI GGNNCC 1 cut(s) 1206
BmrFI CCNGG 1 cut(s) 510
BmsI GCATC 5 cut(s) 52, 322, 763, 826, 1180
BpiI GAAGAC 1 cut(s) 144
Bpu10I CCTNAGC 1 cut(s) 675
BpuEI CTTGAG 5 cut(s) 296, 471, 1145, 1214, 1238
BpuMI CCSGG 1 cut(s) 510
BsaAI YACGTR 1 cut(s) 281
BsaBI GATNNNNATC 1 cut(s) 1011
BsaHI GRCGYC 1 cut(s) 326
BsaJI CCNNGG 2 cut(s) 907, 1409
Bsc4I CCNNNNNNNGG 1 cut(s) 569
Bse1I ACTGG 1 cut(s) 117
Bse8I GATNNNNATC 1 cut(s) 1011
BseDI CCNNGG 2 cut(s) 907, 1409
BseGI GGATG 6 cut(s) 181, 218, 841, 886, 1190, 1195
BseJI GATNNNNATC 1 cut(s) 1011
BseLI CCNNNNNNNGG 1 cut(s) 569
BseMII CTCAG 1 cut(s) 839
BseNI ACTGG 1 cut(s) 117
BseXI GCAGC 3 cut(s) 584, 675, 964
BsgI GTGCAG 2 cut(s) 131, 588
BshFI GGCC 1 cut(s) 912
BshNI GGYRCC 1 cut(s) 1204
BsiHKAI GWGCWC 1 cut(s) 1254
BsiSI CCGG 1 cut(s) 510
BslI CCNNNNNNNGG 1 cut(s) 569
BsmAI GTCTC 2 cut(s) 398, 489
BsnI GGCC 1 cut(s) 912
Bsp1286I GDGCHC 2 cut(s) 575, 1254
Bsp1407I TGTACA 1 cut(s) 92
Bsp143I GATC 4 cut(s) 11, 391, 725, 1006
BspANI GGCC 1 cut(s) 912
BspCNI CTCAG 1 cut(s) 840
BspLI GGNNCC 1 cut(s) 1206
BspMAI CTGCAG 1 cut(s) 693
BspT107I GGYRCC 1 cut(s) 1204
BspTI CTTAAG 1 cut(s) 533
BsrGI TGTACA 1 cut(s) 92
BsrI ACTGG 1 cut(s) 117
BssECI CCNNGG 2 cut(s) 907, 1409
BssMI GATC 4 cut(s) 11, 391, 725, 1006
BssNI GRCGYC 1 cut(s) 326
BssT1I CCWWGG 2 cut(s) 907, 1409
Bst4CI ACNGT 3 cut(s) 255, 553, 1073
Bst6I CTCTTC 1 cut(s) 783
BstACI GRCGYC 1 cut(s) 326
BstAFI CTTAAG 1 cut(s) 533
BstAUI TGTACA 1 cut(s) 92
BstBAI YACGTR 1 cut(s) 281
BstC8I GCNNGC 1 cut(s) 932
BstDEI CTNAG 4 cut(s) 227, 675, 848, 871
BstF5I GGATG 6 cut(s) 181, 218, 841, 886, 1190, 1195
BstHHI GCGC 2 cut(s) 515, 930
BstKTI GATC 4 cut(s) 14, 394, 728, 1009
BstMAI GTCTC 2 cut(s) 398, 489
BstMBI GATC 4 cut(s) 11, 391, 725, 1006
BstMWI GCNNNNNNNGC 3 cut(s) 519, 685, 1048
BstNSI RCATGY 2 cut(s) 522, 1068
BstSCI CCNGG 1 cut(s) 508
BstSFI CTRYAG 2 cut(s) 411, 689
BstSNI TACGTA 1 cut(s) 281
BstV1I GCAGC 3 cut(s) 584, 675, 964
BstV2I GAAGAC 1 cut(s) 144
BstX2I RGATCY 1 cut(s) 725
BstYI RGATCY 1 cut(s) 725
BsuRI GGCC 1 cut(s) 912
BtsCI GGATG 6 cut(s) 181, 218, 841, 886, 1190, 1195
BtsI GCAGTG 1 cut(s) 360
BtsIMutI CAGTG 2 cut(s) 124, 360
Cac8I GCNNGC 1 cut(s) 932
CfoI GCGC 2 cut(s) 515, 930
Cfr13I GGNCC 1 cut(s) 671
Csp6I GTAC 4 cut(s) 93, 210, 1288, 1332
CviAII CATG 4 cut(s) 193, 519, 545, 1065
CviQI GTAC 4 cut(s) 93, 210, 1288, 1332
DdeI CTNAG 4 cut(s) 227, 675, 848, 871
DpnI GATC 4 cut(s) 13, 393, 727, 1008
DpnII GATC 4 cut(s) 11, 391, 725, 1006
DraI TTTAAA 1 cut(s) 1029
DriI GACNNNNNGTC 1 cut(s) 643
Eam1104I CTCTTC 1 cut(s) 783
Eam1105I GACNNNNNGTC 1 cut(s) 643
EarI CTCTTC 1 cut(s) 783
Ecl136II GAGCTC 1 cut(s) 1252
Eco105I TACGTA 1 cut(s) 281
Eco130I CCWWGG 2 cut(s) 907, 1409
Eco24I GRGCYC 2 cut(s) 575, 1254
Eco32I GATATC 1 cut(s) 799
Eco47I GGWCC 1 cut(s) 671
Eco53kI GAGCTC 1 cut(s) 1252
EcoICRI GAGCTC 1 cut(s) 1252
EcoRV GATATC 1 cut(s) 799
EcoT14I CCWWGG 2 cut(s) 907, 1409
EcoT38I GRGCYC 2 cut(s) 575, 1254
ErhI CCWWGG 2 cut(s) 907, 1409
FaeI CATG 4 cut(s) 196, 522, 548, 1068
FatI CATG 4 cut(s) 192, 518, 544, 1064
FblI GTMKAC 2 cut(s) 268, 1022
Fnu4HI GCNGC 3 cut(s) 598, 689, 978
FokI GGATG 6 cut(s) 188, 205, 848, 893, 1197, 1202
FriOI GRGCYC 2 cut(s) 575, 1254
Fsp4HI GCNGC 3 cut(s) 598, 689, 978
FspBI CTAG 3 cut(s) 729, 1410, 1453
FspI TGCGCA 1 cut(s) 929
GlaI GCGC 2 cut(s) 514, 929
GluI GCNGC 3 cut(s) 598, 689, 978
HaeIII GGCC 1 cut(s) 912
HapII CCGG 1 cut(s) 510
HhaI GCGC 2 cut(s) 515, 930
Hin1I GRCGYC 1 cut(s) 326
Hin1II CATG 4 cut(s) 196, 522, 548, 1068
Hin6I GCGC 2 cut(s) 513, 928
HinP1I GCGC 2 cut(s) 513, 928
HindIII AAGCTT 1 cut(s) 17
HinfI GANTC 3 cut(s) 303, 430, 566
HpaII CCGG 1 cut(s) 510
HphI GGTGA 5 cut(s) 475, 829, 1098, 1306, 1333
Hpy166II GTNNAC 4 cut(s) 93, 269, 1023, 1180
Hpy188I TCNGA 3 cut(s) 331, 435, 849
Hpy8I GTNNAC 4 cut(s) 93, 269, 1023, 1180
HpyAV CCTTC 2 cut(s) 826, 905
HpyCH4III ACNGT 3 cut(s) 255, 553, 1073
HpyCH4IV ACGT 2 cut(s) 280, 326
HpyCH4V TGCA 9 cut(s) 112, 251, 605, 691, 709, 941, 980, 1078, 1193
HpyF10VI GCNNNNNNNGC 3 cut(s) 519, 685, 1048
HpyF3I CTNAG 4 cut(s) 227, 675, 848, 871
HpySE526I ACGT 2 cut(s) 280, 326
Hsp92I GRCGYC 1 cut(s) 326
Hsp92II CATG 4 cut(s) 196, 522, 548, 1068
HspAI GCGC 2 cut(s) 513, 928
Kzo9I GATC 4 cut(s) 11, 391, 725, 1006
LmnI GCTCC 3 cut(s) 781, 1048, 1249
Lsp1109I GCAGC 3 cut(s) 584, 675, 964
LweI GCATC 5 cut(s) 52, 322, 763, 826, 1180
MaeI CTAG 3 cut(s) 729, 1410, 1453
MaeII ACGT 2 cut(s) 280, 326
MaeIII GTNAC 7 cut(s) 276, 452, 502, 547, 1067, 1080, 1321
MalI GATC 4 cut(s) 13, 393, 727, 1008
MboI GATC 4 cut(s) 11, 391, 725, 1006
MboII GAAGA 5 cut(s) 50, 144, 151, 800, 1007
MflI RGATCY 1 cut(s) 725
MhlI GDGCHC 2 cut(s) 575, 1254
MluCI AATT 5 cut(s) 26, 33, 945, 1111, 1431
MmeI TCCRAC 2 cut(s) 774, 1112
MnlI CCTC 6 cut(s) 97, 551, 843, 1159, 1238, 1380
MseI TTAA 7 cut(s) 8, 29, 204, 534, 951, 957, 1028
MslI CAYNNNNRTG 1 cut(s) 461
MspA1I CMGCKG 1 cut(s) 977
MspCI CTTAAG 1 cut(s) 533
MspI CCGG 1 cut(s) 510
MspR9I CCNGG 1 cut(s) 510
MwoI GCNNNNNNNGC 3 cut(s) 519, 685, 1048
NciI CCSGG 1 cut(s) 510
NdeII GATC 4 cut(s) 11, 391, 725, 1006
NlaIII CATG 4 cut(s) 196, 522, 548, 1068
NlaIV GGNNCC 1 cut(s) 1206
NmuCI GTSAC 2 cut(s) 1080, 1321
NsbI TGCGCA 1 cut(s) 929
NspI RCATGY 2 cut(s) 522, 1068
OliI CACNNNNGTG 1 cut(s) 461
PciI ACATGT 1 cut(s) 1064
PfeI GAWTC 3 cut(s) 303, 430, 566
PkrI GCNGC 3 cut(s) 599, 690, 979
Ppu21I YACGTR 1 cut(s) 281
PscI ACATGT 1 cut(s) 1064
PsiI TTATAA 1 cut(s) 654
Psp124BI GAGCTC 1 cut(s) 1254
PspN4I GGNNCC 1 cut(s) 1206
PspPI GGNCC 1 cut(s) 671
PstI CTGCAG 1 cut(s) 693
PsuI RGATCY 1 cut(s) 725
PvuII CAGCTG 1 cut(s) 977
RsaI GTAC 4 cut(s) 94, 211, 1289, 1333
RsaNI GTAC 4 cut(s) 93, 210, 1288, 1332
RseI CAYNNNNRTG 1 cut(s) 461
SacI GAGCTC 1 cut(s) 1254
SaqAI TTAA 7 cut(s) 8, 29, 204, 534, 951, 957, 1028
SatI GCNGC 3 cut(s) 598, 689, 978
Sau3AI GATC 4 cut(s) 11, 391, 725, 1006
Sau96I GGNCC 1 cut(s) 671
ScaI AGTACT 1 cut(s) 1289
ScrFI CCNGG 1 cut(s) 510
SduI GDGCHC 2 cut(s) 575, 1254
SfaNI GCATC 5 cut(s) 52, 322, 763, 826, 1180
SfcI CTRYAG 2 cut(s) 411, 689
SinI GGWCC 1 cut(s) 671
SmiMI CAYNNNNRTG 1 cut(s) 461
SmlI CTYRAG 6 cut(s) 311, 486, 533, 1124, 1229, 1253
SmoI CTYRAG 6 cut(s) 311, 486, 533, 1124, 1229, 1253
SnaBI TACGTA 1 cut(s) 281
Sse9I AATT 5 cut(s) 26, 33, 945, 1111, 1431
SspI AATATT 1 cut(s) 759
SspMI CTAG 3 cut(s) 729, 1410, 1453
SstI GAGCTC 1 cut(s) 1254
StyD4I CCNGG 1 cut(s) 508
StyI CCWWGG 2 cut(s) 907, 1409
TaaI ACNGT 3 cut(s) 255, 553, 1073
TaiI ACGT 2 cut(s) 283, 329
TaqI TCGA 1 cut(s) 575
TasI AATT 5 cut(s) 26, 33, 945, 1111, 1431
TatI WGTACW 3 cut(s) 92, 1287, 1331
TfiI GAWTC 3 cut(s) 303, 430, 566
Tru1I TTAA 7 cut(s) 8, 29, 204, 534, 951, 957, 1028
Tru9I TTAA 7 cut(s) 8, 29, 204, 534, 951, 957, 1028
TscAI CASTG 2 cut(s) 124, 367
TseFI GTSAC 2 cut(s) 1080, 1321
TseI GCWGC 3 cut(s) 597, 688, 977
Tsp45I GTSAC 2 cut(s) 1080, 1321
TspDTI ATGAA 5 cut(s) 192, 287, 691, 887, 1362
TspGWI ACGGA 1 cut(s) 1197
TspRI CASTG 2 cut(s) 124, 367
Vha464I CTTAAG 1 cut(s) 533
VpaK11BI GGWCC 1 cut(s) 671
XapI RAATTY 1 cut(s) 1111
XceI RCATGY 2 cut(s) 522, 1068
XcmI CCANNNNNNNNNTGG 2 cut(s) 169, 1387
XmaJI CCTAGG 1 cut(s) 1409
XmiI GTMKAC 2 cut(s) 268, 1022
XspI CTAG 3 cut(s) 729, 1410, 1453
ZraI GACGTC 1 cut(s) 327
ZrmI AGTACT 1 cut(s) 1289
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.