FvH4_5g02221

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000079
Physical Location & Seq
Reverse (-)
1370624 .. 1372851
2228 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g02221.t1

Sequence Viewer

Length: 1464 bp
ATGGCTTCAAATTTAATGCATCACAAAGTAAGAATTGAAGATAGGATCAGTGGGATGCCAGATGCAGTTCTTTGCCACATTCTCTCCTCCCTTTTCACCACAGAGGCTGTAAAGACCAGTGTTTTATCTCATAGATGGAAGAATGTCTGGGCTTCTGTTCCTGTTCTAGATTTAGATGAGGAAGAATATGATGCGGATATGAATCAGCCATTATATAACCCGGAGGATTGTTTTGCACAGTTTGTGAATCGTGTGCTTATGTTTCGTTGCTCGGGAGACATTCATAGGTTCCGTCTTTCCACTAATGGTATGGATGATGTTTCTCTTATCTATGCTTGGATTTCCACTGCCATTAGGCGTAATGTTGTGGAGTTTGATCTTACTGTCCAAAGAAGTACAGTGCCACCTTTTGAGATCCCCAAAAGCCTTTTCATGTGTAGCACATTGGTCCGTTTCAAGTTGTGGCTGCATAGAGGTATTAGGGTCATGATTCCTACTAGTTCAAATTGTTTCCCGAGCCTCAAGTTCCTTCATGTTACAGTTCATTTTCCTGATTCTGACTCAATGGAGAAGCTCTTTTCTCGTTTACCTGTGCTTGAAGAGCTGATTATAGATGGAAACTTTGTAGAGTCAACAACTTCCAATCTTGATATATCTGCACCCAAACTAAAGAGACTACAAACTGAGCTCAGAGTCTTTAAGCATGATATGCATTTTGCTAACTTTGTAAATTATGTGTGCCAAATTTTCGTTAATGTTGATGCTCCAAATCTTGAAGAGTTAGATATCTGCTTTGATCCTCTGGTGAGCTTTTCTTTGAAGAATGCCAAATGTCTACGCAAAGCCAAGATAGATTTCTTTTATGTGGAAGAGCTGAAAAAGCATGATTATTTCCTTGGCCTTGCTGATCGCATACATCAGATTTTTGCAGGAATCTATGATGCTAAGTACCTGACAGTAAAAGCTCCATTGTTGGCGGCCCTTGACATTGGACATCAATATCTTCTGCCTACGTTTAATAATTTGAACTACTTGGAGCTACAGCTTCATACTTGTCGATGTTTGCAATCGCTGGCAACTGTGCTCAAGATATCACCACATTTGGAGCAACTGAAGATATTACTGAAAAGGAAACATATGTATGCCAATGAGAATAACTATTCTGATGATGTCGATGAGGATGAGGTTGAACCGGAATGGGATGCACCAGAGACGGTGCCTGTTTGTTTGATTTCACACCTCAAGACTATTTGCCTATGGGATTTCAAGGGGTGTCCAGATGACATGGAAGTCGCCAAGTACTTGGTGCAGCATGGCAAGGCTTTGAATAGGGTGACTATTCATACTCCCTTTTGTGAAAACAAAGAGATGAAGTCACAGTCTGCTACTGCCTTATGGTCGAATGTTTCAAAGTTTCCAAGGGGTTCCAAGACATGTGAGATTGAATTTCAGACAATCATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

488

Amino Acids

56.19

Weight (kDa)

6.03

Isoelectric Point (pI)

44.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 16 - 55 9.3e-06 F-box domain
LRR_At5g56370 PF24758 112 - 264 2e-11 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 403 - 447 5.7e-11 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1289
AccB1I GGYRCC 1 cut(s) 1216
AccI GTMKAC 1 cut(s) 835
AciI CCGC 2 cut(s) 194, 977
AclWI GGATC 3 cut(s) 53, 409, 791
AcsI RAATTY 3 cut(s) 10, 744, 1445
AcuI CTGAAG 1 cut(s) 1133
AfaI GTAC 3 cut(s) 397, 950, 1301
AflIII ACRYGT 1 cut(s) 1433
AhlI ACTAGT 1 cut(s) 497
AjuI GAANNNNNNNTTGG 4 cut(s) 413, 445, 839, 871
AluBI AGCT 8 cut(s) 574, 604, 688, 810, 874, 965, 1039, 1045
AluI AGCT 8 cut(s) 574, 604, 688, 810, 874, 965, 1039, 1045
Alw21I GWGCWC 2 cut(s) 690, 1086
Alw26I GTCTC 3 cut(s) 270, 667, 1205
AlwI GGATC 3 cut(s) 53, 409, 791
AlwNI CAGNNNCTG 1 cut(s) 107
Ama87I CYCGRG 2 cut(s) 271, 514
AoxI GGCC 2 cut(s) 898, 978
ApeKI GCWGC 2 cut(s) 466, 1309
ApoI RAATTY 3 cut(s) 10, 744, 1445
AspS9I GGNCC 2 cut(s) 448, 979
AsuC2I CCSGG 1 cut(s) 221
AsuHPI GGTGA 4 cut(s) 88, 817, 1086, 1345
AvaI CYCGRG 2 cut(s) 271, 514
AvaII GGWCC 1 cut(s) 448
BanI GGYRCC 1 cut(s) 1216
BanII GRGCYC 1 cut(s) 690
Bbv12I GWGCWC 2 cut(s) 690, 1086
BbvI GCAGC 2 cut(s) 453, 1321
BccI CCATC 2 cut(s) 129, 608
BcnI CCSGG 1 cut(s) 221
BcoDI GTCTC 3 cut(s) 270, 667, 1205
BcuI ACTAGT 1 cut(s) 497
BfaI CTAG 2 cut(s) 167, 498
BfmI CTRYAG 1 cut(s) 1040
BisI GCNGC 3 cut(s) 467, 978, 1310
BlsI GCNGC 3 cut(s) 468, 979, 1311
BmcAI AGTACT 1 cut(s) 1301
Bme1390I CCNGG 1 cut(s) 221
Bme18I GGWCC 1 cut(s) 448
BmeT110I CYCGRG 2 cut(s) 271, 514
BmgT120I GGNCC 2 cut(s) 448, 979
BmiI GGNNCC 3 cut(s) 290, 1218, 1426
BmrFI CCNGG 1 cut(s) 221
BmsI GCATC 7 cut(s) 28, 45, 52, 181, 751, 931, 1192
BpuEI CTTGAG 3 cut(s) 506, 1070, 1226
BpuMI CCSGG 1 cut(s) 221
BsaBI GATNNNNATC 1 cut(s) 201
BsaJI CCNNGG 2 cut(s) 895, 1418
BsaWI WCCGGW 1 cut(s) 1192
BsaXI ACNNNNNCTCC 2 cut(s) 68, 98
Bse1I ACTGG 1 cut(s) 117
Bse8I GATNNNNATC 1 cut(s) 201
BseDI CCNNGG 2 cut(s) 895, 1418
BseGI GGATG 4 cut(s) 60, 319, 1186, 1207
BseJI GATNNNNATC 1 cut(s) 201
BseMII CTCAG 2 cut(s) 675, 703
BseNI ACTGG 1 cut(s) 117
BseRI GAGGAG 1 cut(s) 76
BseXI GCAGC 2 cut(s) 453, 1321
BsgI GTGCAG 2 cut(s) 642, 1328
BshFI GGCC 2 cut(s) 900, 980
BshNI GGYRCC 1 cut(s) 1216
BsiHKAI GWGCWC 2 cut(s) 690, 1086
BsiHKCI CYCGRG 2 cut(s) 271, 514
BsiSI CCGG 2 cut(s) 221, 1193
BsmAI GTCTC 3 cut(s) 270, 667, 1205
BsmBI CGTCTC 1 cut(s) 1205
BsmI GAATGC 1 cut(s) 829
BsnI GGCC 2 cut(s) 900, 980
BsoBI CYCGRG 2 cut(s) 271, 514
Bsp1286I GDGCHC 2 cut(s) 690, 1086
Bsp143I GATC 5 cut(s) 45, 376, 414, 796, 907
BspACI CCGC 2 cut(s) 194, 977
BspANI GGCC 2 cut(s) 900, 980
BspCNI CTCAG 2 cut(s) 676, 702
BspHI TCATGA 1 cut(s) 486
BspLI GGNNCC 3 cut(s) 290, 1218, 1426
BspPI GGATC 3 cut(s) 53, 409, 791
BspQI GCTCTTC 2 cut(s) 594, 864
BspT107I GGYRCC 1 cut(s) 1216
BsrI ACTGG 1 cut(s) 117
BssECI CCNNGG 2 cut(s) 895, 1418
BssMI GATC 5 cut(s) 45, 376, 414, 796, 907
BssT1I CCWWGG 2 cut(s) 895, 1418
Bst4CI ACNGT 8 cut(s) 240, 385, 400, 541, 958, 1081, 1216, 1380
Bst6I CTCTTC 3 cut(s) 594, 771, 864
BstAPI GCANNNNNTGC 1 cut(s) 709
BstC8I GCNNGC 1 cut(s) 1074
BstDEI CTNAG 3 cut(s) 684, 689, 945
BstF5I GGATG 4 cut(s) 60, 319, 1186, 1207
BstKTI GATC 5 cut(s) 48, 379, 417, 799, 910
BstMAI GTCTC 3 cut(s) 270, 667, 1205
BstMBI GATC 5 cut(s) 45, 376, 414, 796, 907
BstMWI GCNNNNNNNGC 3 cut(s) 601, 709, 880
BstNSI RCATGY 1 cut(s) 1437
BstSCI CCNGG 1 cut(s) 219
BstSFI CTRYAG 1 cut(s) 1040
BstV1I GCAGC 2 cut(s) 453, 1321
BstX2I RGATCY 1 cut(s) 414
BstXI CCANNNNNNTGG 1 cut(s) 1303
BstYI RGATCY 1 cut(s) 414
BsuRI GGCC 2 cut(s) 900, 980
BtsCI GGATG 4 cut(s) 60, 319, 1186, 1207
BtsI GCAGTG 1 cut(s) 345
BtsIMutI CAGTG 4 cut(s) 55, 124, 345, 405
Cac8I GCNNGC 1 cut(s) 1074
CaiI CAGNNNCTG 1 cut(s) 107
CciI TCATGA 1 cut(s) 486
Cfr13I GGNCC 2 cut(s) 448, 979
Csp6I GTAC 3 cut(s) 396, 949, 1300
CviAII CATG 8 cut(s) 433, 487, 533, 704, 884, 1285, 1313, 1434
CviQI GTAC 3 cut(s) 396, 949, 1300
DdeI CTNAG 3 cut(s) 684, 689, 945
DpnI GATC 5 cut(s) 47, 378, 416, 798, 909
DpnII GATC 5 cut(s) 45, 376, 414, 796, 907
DrdI GACNNNNNNGTC 1 cut(s) 1289
DseDI GACNNNNNNGTC 1 cut(s) 1289
Eam1104I CTCTTC 3 cut(s) 594, 771, 864
EarI CTCTTC 3 cut(s) 594, 771, 864
Ecl136II GAGCTC 1 cut(s) 688
Eco130I CCWWGG 2 cut(s) 895, 1418
Eco24I GRGCYC 1 cut(s) 690
Eco32I GATATC 2 cut(s) 787, 1092
Eco47I GGWCC 1 cut(s) 448
Eco53kI GAGCTC 1 cut(s) 688
Eco57I CTGAAG 1 cut(s) 1133
Eco88I CYCGRG 2 cut(s) 271, 514
EcoICRI GAGCTC 1 cut(s) 688
EcoRV GATATC 2 cut(s) 787, 1092
EcoT14I CCWWGG 2 cut(s) 895, 1418
EcoT22I ATGCAT 2 cut(s) 21, 714
EcoT38I GRGCYC 1 cut(s) 690
ErhI CCWWGG 2 cut(s) 895, 1418
Esp3I CGTCTC 1 cut(s) 1205
FaeI CATG 8 cut(s) 436, 490, 536, 707, 887, 1288, 1316, 1437
FatI CATG 8 cut(s) 432, 486, 532, 703, 883, 1284, 1312, 1433
FauNDI CATATG 1 cut(s) 1137
FblI GTMKAC 1 cut(s) 835
Fnu4HI GCNGC 3 cut(s) 467, 978, 1310
FokI GGATG 4 cut(s) 67, 326, 1193, 1214
FriOI GRGCYC 1 cut(s) 690
Fsp4HI GCNGC 3 cut(s) 467, 978, 1310
FspBI CTAG 2 cut(s) 167, 498
GluI GCNGC 3 cut(s) 467, 978, 1310
HaeIII GGCC 2 cut(s) 900, 980
HapII CCGG 2 cut(s) 221, 1193
Hin1II CATG 8 cut(s) 436, 490, 536, 707, 887, 1288, 1316, 1437
HincII GTYRAC 1 cut(s) 633
HindII GTYRAC 1 cut(s) 633
HinfI GANTC 8 cut(s) 202, 247, 490, 554, 560, 629, 693, 933
HpaII CCGG 2 cut(s) 221, 1193
HphI GGTGA 4 cut(s) 88, 817, 1086, 1345
Hpy166II GTNNAC 3 cut(s) 587, 633, 836
Hpy188I TCNGA 5 cut(s) 559, 692, 921, 1165, 1452
Hpy8I GTNNAC 3 cut(s) 587, 633, 836
HpyAV CCTTC 1 cut(s) 539
HpyCH4III ACNGT 8 cut(s) 240, 385, 400, 541, 958, 1081, 1216, 1380
HpyCH4IV ACGT 1 cut(s) 1013
HpyF10VI GCNNNNNNNGC 3 cut(s) 601, 709, 880
HpyF3I CTNAG 3 cut(s) 684, 689, 945
HpySE526I ACGT 1 cut(s) 1013
Hsp92II CATG 8 cut(s) 436, 490, 536, 707, 887, 1288, 1316, 1437
Kzo9I GATC 5 cut(s) 45, 376, 414, 796, 907
LguI GCTCTTC 2 cut(s) 594, 864
LmnI GCTCC 4 cut(s) 769, 970, 1036, 1105
Lsp1109I GCAGC 2 cut(s) 453, 1321
LweI GCATC 7 cut(s) 28, 45, 52, 181, 751, 931, 1192
MaeI CTAG 2 cut(s) 167, 498
MaeII ACGT 1 cut(s) 1013
MaeIII GTNAC 3 cut(s) 535, 1333, 1374
MalI GATC 5 cut(s) 47, 378, 416, 798, 909
MboI GATC 5 cut(s) 45, 376, 414, 796, 907
MboII GAAGA 9 cut(s) 50, 151, 194, 611, 788, 832, 881, 995, 1126
MflI RGATCY 1 cut(s) 414
MhlI GDGCHC 2 cut(s) 690, 1086
MluCI AATT 7 cut(s) 10, 33, 505, 730, 744, 1021, 1445
MlyI GAGTC 3 cut(s) 554, 638, 702
Mph1103I ATGCAT 2 cut(s) 21, 714
MseI TTAA 4 cut(s) 14, 699, 753, 1017
MslI CAYNNNNRTG 1 cut(s) 1140
MspI CCGG 2 cut(s) 221, 1193
MspR9I CCNGG 1 cut(s) 221
Mva1269I GAATGC 1 cut(s) 829
MwoI GCNNNNNNNGC 3 cut(s) 601, 709, 880
NciI CCSGG 1 cut(s) 221
NdeI CATATG 1 cut(s) 1137
NdeII GATC 5 cut(s) 45, 376, 414, 796, 907
NlaIII CATG 8 cut(s) 436, 490, 536, 707, 887, 1288, 1316, 1437
NlaIV GGNNCC 3 cut(s) 290, 1218, 1426
NmuCI GTSAC 2 cut(s) 1333, 1374
NsiI ATGCAT 2 cut(s) 21, 714
NspI RCATGY 1 cut(s) 1437
PagI TCATGA 1 cut(s) 486
PciI ACATGT 1 cut(s) 1433
PciSI GCTCTTC 2 cut(s) 594, 864
PctI GAATGC 1 cut(s) 829
PfeI GAWTC 5 cut(s) 202, 247, 490, 554, 933
PkrI GCNGC 3 cut(s) 468, 979, 1311
PleI GAGTC 3 cut(s) 554, 637, 701
PpsI GAGTC 3 cut(s) 554, 637, 701
PscI ACATGT 1 cut(s) 1433
Psp124BI GAGCTC 1 cut(s) 690
PspN4I GGNNCC 3 cut(s) 290, 1218, 1426
PspPI GGNCC 2 cut(s) 448, 979
PstNI CAGNNNCTG 1 cut(s) 107
PsuI RGATCY 1 cut(s) 414
RsaI GTAC 3 cut(s) 397, 950, 1301
RsaNI GTAC 3 cut(s) 396, 949, 1300
RseI CAYNNNNRTG 1 cut(s) 1140
SacI GAGCTC 1 cut(s) 690
SapI GCTCTTC 2 cut(s) 594, 864
SaqAI TTAA 4 cut(s) 14, 699, 753, 1017
SatI GCNGC 3 cut(s) 467, 978, 1310
Sau3AI GATC 5 cut(s) 45, 376, 414, 796, 907
Sau96I GGNCC 2 cut(s) 448, 979
ScaI AGTACT 1 cut(s) 1301
SchI GAGTC 3 cut(s) 554, 638, 702
ScrFI CCNGG 1 cut(s) 221
SduI GDGCHC 2 cut(s) 690, 1086
SfaNI GCATC 7 cut(s) 28, 45, 52, 181, 751, 931, 1192
SfcI CTRYAG 1 cut(s) 1040
SinI GGWCC 1 cut(s) 448
SmiMI CAYNNNNRTG 1 cut(s) 1140
SmlI CTYRAG 3 cut(s) 521, 1085, 1241
SmoI CTYRAG 3 cut(s) 521, 1085, 1241
SpeI ACTAGT 1 cut(s) 497
Sse9I AATT 7 cut(s) 10, 33, 505, 730, 744, 1021, 1445
SsiI CCGC 2 cut(s) 194, 977
SspMI CTAG 2 cut(s) 167, 498
SstI GAGCTC 1 cut(s) 690
StyD4I CCNGG 1 cut(s) 219
StyI CCWWGG 2 cut(s) 895, 1418
TaaI ACNGT 8 cut(s) 240, 385, 400, 541, 958, 1081, 1216, 1380
TaiI ACGT 1 cut(s) 1016
TaqI TCGA 3 cut(s) 1057, 1173, 1400
TasI AATT 7 cut(s) 10, 33, 505, 730, 744, 1021, 1445
TatI WGTACW 2 cut(s) 395, 1299
TauI GCSGC 1 cut(s) 980
TfiI GAWTC 5 cut(s) 202, 247, 490, 554, 933
Tru1I TTAA 4 cut(s) 14, 699, 753, 1017
Tru9I TTAA 4 cut(s) 14, 699, 753, 1017
TscAI CASTG 4 cut(s) 55, 124, 352, 405
TseFI GTSAC 2 cut(s) 1333, 1374
TseI GCWGC 2 cut(s) 466, 1309
Tsp45I GTSAC 2 cut(s) 1333, 1374
TspDTI ATGAA 8 cut(s) 215, 272, 421, 521, 533, 1037, 1331, 1385
TspGWI ACGGA 2 cut(s) 281, 440
TspRI CASTG 4 cut(s) 55, 124, 352, 405
VpaK11BI GGWCC 1 cut(s) 448
XapI RAATTY 3 cut(s) 10, 744, 1445
XbaI TCTAGA 1 cut(s) 166
XceI RCATGY 1 cut(s) 1437
XcmI CCANNNNNNNNNTGG 1 cut(s) 307
XmiI GTMKAC 1 cut(s) 835
XspI CTAG 2 cut(s) 167, 498
ZrmI AGTACT 1 cut(s) 1301
Zsp2I ATGCAT 2 cut(s) 21, 714
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.