FvH4_7g28030

FBD-associated F-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000079
Physical Location & Seq
Forward (+)
20829237 .. 20833380
4144 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g28030.t1

Sequence Viewer

Length: 1512 bp
ATGGCACTTGCTGACCATGTGGTTTCCCTTCACGACTTGACAGACATCTTAAAGTTCGATCTTACTTATGTGAATGATGGCATAAGAGATGATATGTTGGCTGCTGACTACACTTGTATCCGCAAATGGATTTGCACTATTGTTCAGCACAATGTCGCCGAGCTTCGTCTTAACCTTTCCAATTTTGATGGTACTCAAGACCCTTTTTTGGTTCCTGAATGTCTTTTCATGAGCACAACACTTGTTGATTTGAAGGTGGACTCCGATATTATTAGCTTCTCAAATTGCCCTATAGAAGGGTGTTTCCCAAGGCTCAAGGCGCTTTATGTTAGTGTTGATGAATCTGAACAAGATTCACCGAGTTCGCTGGAAAACCTTTTTCGTTGTTGCCCGGTACTGGAACAGCTGACTATCCTTGGGACTTTTTCTGAGTCGAATATCACTATCTCTGCTCCTGAACTGAAGACATTAAGAATGGATTGCAGCTTTTGTGATTCCAACGCCTTTTCCATTAATGCCCCAAAGCTGGAAAACTTTGATCTCTTAGACAACTCTTCTGTTCCAAATACGTATCACTTCGAGAATGGAAGATCTCCGATCAAAGTTAAACTTACACTCCATAATGATAATGATGATTTTGATGCTGATCGCGCTACCGCTCTGTTTGCACAAATTTCCAATGTTGAAGATCTGTCTCTTAGTCTCAAGGGTCTCACTGACAATAAATGGCATAGCACAGACAACGGGCCAGAATGGGAGTTTTTCAATCCACCTGAGTGTCCTGCTTGTTTGGTGTCTCACCTCCAGACCATCTCCATAAAAGGCTTCAAGGGACAACAGGATGAGATGAACGTAGCCCAGTATTTACTACAGAATGAAAATCAATCACTGAGTGGCTATCCATATTTCTCAATTGGCCAAGAACAATTTGAGCCTCGTGGCGAAGAAGGTTCCTTTCTTGTCTTAGATTCGAAAAATTTGGAATCTAAGTTAAGCACGACTGTTGTTGGTGCTTCCGGAGACCTTGCCAAGAAGAAGCAATGGAGATCGTCTACCCGAGCGTTTGGTTTCGGTCGAAATAAAATGACTGATGAAAAGGTAAGGAAAATGATTAGCCGAACCTTGACTTGCAGAATAGATCGGAGGCTGGCAAAAAGTCAAATAAGCCGTTTTAGTTATCAATACCTCCAAACAACTTTTTTTGGACATGCCTTGGAGCTTCTTCCAAAAAATGGGTGGACTACTGTCATTGTTGAGAAGCCATTTGGTCATGGCTCTGAATCCTCTGTGGACATAATGCAAAATCATCTTCTGCAGATACTAGCACCTTTTGCAATGGAAAGACCGGTAAAGGTTCTAAGATCAATGAGGCCACTGCAGAGTGAAGATGTAGTTGTCGCCCAATATAAGGGCCAGAACAAGGGCGGTAAAACATTTCTAGCTTATATAGATGGCAAAACTGTGCCAATCGACAGTCTCAACCCTATATTTGCTGCAGCAGCTCCCTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

504

Amino Acids

56.4

Weight (kDa)

5.21

Isoelectric Point (pI)

47.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At5g56370 PF24758 41 - 189 1.3e-12 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 261 - 292 4.9e-08 FBD
G6PD_C PF02781 431 - 500 1.4e-09 Glucose-6-phosphate dehydrogenase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1232
AccBSI CCGCTC 1 cut(s) 659
AccI GTMKAC 1 cut(s) 1052
AccII CGCG 1 cut(s) 651
AccIII TCCGGA 1 cut(s) 1016
AciI CCGC 3 cut(s) 121, 657, 1425
AcoI YGGCCR 1 cut(s) 916
AcsI RAATTY 2 cut(s) 672, 976
AcuI CTGAAG 1 cut(s) 482
AdeI CACNNNGTG 1 cut(s) 893
AfaI GTAC 2 cut(s) 193, 396
AfiI CCNNNNNNNGG 7 cut(s) 208, 296, 397, 526, 1232, 1408, 1420
AgeI ACCGGT 1 cut(s) 1345
AgsI TTSAA 4 cut(s) 253, 686, 766, 829
AleI CACNNNNGTG 1 cut(s) 775
AluBI AGCT 8 cut(s) 163, 276, 406, 486, 526, 1219, 1442, 1502
AluI AGCT 8 cut(s) 163, 276, 406, 486, 526, 1219, 1442, 1502
Alw21I GWGCWC 1 cut(s) 236
Alw26I GTCTC 6 cut(s) 699, 707, 716, 801, 1014, 1481
Ama87I CYCGRG 1 cut(s) 1056
Aor13HI TCCGGA 1 cut(s) 1016
AoxI GGCC 4 cut(s) 746, 916, 1370, 1411
ApeKI GCWGC 5 cut(s) 101, 483, 1493, 1496, 1499
ApoI RAATTY 2 cut(s) 672, 976
AseI ATTAAT 1 cut(s) 513
AsiGI ACCGGT 1 cut(s) 1345
AspLEI GCGC 2 cut(s) 322, 653
AspS9I GGNCC 2 cut(s) 746, 1411
AsuC2I CCSGG 1 cut(s) 392
AsuHPI GGTGA 2 cut(s) 348, 791
AsuII TTCGAA 1 cut(s) 971
AvaI CYCGRG 1 cut(s) 1056
BaeI ACNNNNGTAYC 2 cut(s) 100, 133
BalI TGGCCA 1 cut(s) 918
BauI CACGAG 1 cut(s) 936
BbsI GAAGAC 1 cut(s) 470
Bbv12I GWGCWC 1 cut(s) 236
BbvI GCAGC 4 cut(s) 88, 495, 1480, 1508
BccI CCATC 4 cut(s) 71, 182, 818, 1445
BceAI ACGGC 1 cut(s) 1152
BciVI GTATCC 1 cut(s) 128
BcnI CCSGG 1 cut(s) 392
BcoDI GTCTC 6 cut(s) 699, 707, 716, 801, 1014, 1481
BfaI CTAG 2 cut(s) 1322, 1439
BfmI CTRYAG 5 cut(s) 291, 869, 1313, 1376, 1494
BfoI RGCGCY 1 cut(s) 323
BfuI GTATCC 1 cut(s) 128
BglII AGATCT 2 cut(s) 590, 688
BisI GCNGC 5 cut(s) 102, 484, 1494, 1497, 1500
BlsI GCNGC 5 cut(s) 103, 485, 1495, 1498, 1501
Bme1390I CCNGG 1 cut(s) 392
BmeT110I CYCGRG 1 cut(s) 1056
BmgT120I GGNCC 2 cut(s) 746, 1411
BmiI GGNNCC 2 cut(s) 213, 952
BmrFI CCNGG 1 cut(s) 392
BmrI ACTGGG 1 cut(s) 853
BmsI GCATC 1 cut(s) 631
BmuI ACTGGG 1 cut(s) 853
BoxI GACNNNNGTC 1 cut(s) 1244
BpiI GAAGAC 1 cut(s) 470
BpmI CTGGAG 1 cut(s) 788
Bpu14I TTCGAA 1 cut(s) 971
BpuEI CTTGAG 3 cut(s) 180, 299, 689
BpuMI CCSGG 1 cut(s) 392
BsaAI YACGTR 1 cut(s) 570
BsaBI GATNNNNATC 1 cut(s) 645
BsaI GGTCTC 2 cut(s) 716, 1014
BsaJI CCNNGG 3 cut(s) 308, 415, 1212
BsaWI WCCGGW 2 cut(s) 1016, 1345
BsaXI ACNNNNNCTCC 2 cut(s) 600, 630
Bsc4I CCNNNNNNNGG 7 cut(s) 208, 296, 397, 526, 1232, 1408, 1420
Bse118I RCCGGY 1 cut(s) 1345
Bse1I ACTGG 2 cut(s) 402, 859
Bse3DI GCAATG 2 cut(s) 1046, 1341
Bse8I GATNNNNATC 1 cut(s) 645
BseAI TCCGGA 1 cut(s) 1016
BseDI CCNNGG 3 cut(s) 308, 415, 1212
BseGI GGATG 1 cut(s) 847
BseJI GATNNNNATC 1 cut(s) 645
BseLI CCNNNNNNNGG 7 cut(s) 208, 296, 397, 526, 1232, 1408, 1420
BseMI GCAATG 2 cut(s) 1046, 1341
BseMII CTCAG 3 cut(s) 420, 765, 881
BseNI ACTGG 2 cut(s) 402, 859
BseXI GCAGC 4 cut(s) 88, 495, 1480, 1508
Bsh1236I CGCG 1 cut(s) 651
Bsh1285I CGRYCG 1 cut(s) 1075
BshFI GGCC 4 cut(s) 748, 918, 1372, 1413
BshTI ACCGGT 1 cut(s) 1345
BsiEI CGRYCG 1 cut(s) 1075
BsiHKAI GWGCWC 1 cut(s) 236
BsiHKCI CYCGRG 1 cut(s) 1056
BsiSI CCGG 3 cut(s) 392, 1017, 1346
BslFI GGGAC 2 cut(s) 433, 846
BslI CCNNNNNNNGG 7 cut(s) 208, 296, 397, 526, 1232, 1408, 1420
BsmAI GTCTC 6 cut(s) 699, 707, 716, 801, 1014, 1481
BsmFI GGGAC 2 cut(s) 433, 846
BsnI GGCC 4 cut(s) 748, 918, 1372, 1413
Bso31I GGTCTC 2 cut(s) 716, 1014
BsoBI CYCGRG 1 cut(s) 1056
Bsp119I TTCGAA 1 cut(s) 971
Bsp1286I GDGCHC 1 cut(s) 236
Bsp13I TCCGGA 1 cut(s) 1016
Bsp143I GATC 9 cut(s) 58, 538, 590, 597, 646, 688, 1046, 1138, 1361
BspACI CCGC 3 cut(s) 121, 657, 1425
BspANI GGCC 4 cut(s) 748, 918, 1372, 1413
BspCNI CTCAG 3 cut(s) 421, 766, 882
BspEI TCCGGA 1 cut(s) 1016
BspFNI CGCG 1 cut(s) 651
BspHI TCATGA 1 cut(s) 228
BspLI GGNNCC 2 cut(s) 213, 952
BspMAI CTGCAG 3 cut(s) 1317, 1380, 1498
BspT104I TTCGAA 1 cut(s) 971
BspTNI GGTCTC 2 cut(s) 716, 1014
BsrBI CCGCTC 1 cut(s) 659
BsrDI GCAATG 2 cut(s) 1046, 1341
BsrFI RCCGGY 1 cut(s) 1345
BsrI ACTGG 2 cut(s) 402, 859
BssAI RCCGGY 1 cut(s) 1345
BssECI CCNNGG 3 cut(s) 308, 415, 1212
BssMI GATC 9 cut(s) 58, 538, 590, 597, 646, 688, 1046, 1138, 1361
BssSI CACGAG 1 cut(s) 936
BssT1I CCWWGG 3 cut(s) 308, 415, 1212
Bst2BI CACGAG 1 cut(s) 936
Bst4CI ACNGT 4 cut(s) 1003, 1246, 1462, 1475
Bst6I CTCTTC 1 cut(s) 559
BstAPI GCANNNNNTGC 1 cut(s) 1331
BstBAI YACGTR 1 cut(s) 570
BstBI TTCGAA 1 cut(s) 971
BstC8I GCNNGC 1 cut(s) 1149
BstDEI CTNAG 8 cut(s) 429, 544, 698, 774, 890, 964, 987, 1358
BstENI CCTNNNNNAGG 1 cut(s) 294
BstF5I GGATG 1 cut(s) 847
BstFNI CGCG 1 cut(s) 651
BstH2I RGCGCY 1 cut(s) 323
BstHHI GCGC 2 cut(s) 322, 653
BstKTI GATC 9 cut(s) 61, 541, 593, 600, 649, 691, 1049, 1141, 1364
BstMAI GTCTC 6 cut(s) 699, 707, 716, 801, 1014, 1481
BstMBI GATC 9 cut(s) 58, 538, 590, 597, 646, 688, 1046, 1138, 1361
BstMCI CGRYCG 1 cut(s) 1075
BstMWI GCNNNNNNNGC 5 cut(s) 319, 650, 665, 1331, 1499
BstNSI RCATGY 1 cut(s) 1211
BstPAI GACNNNNGTC 1 cut(s) 1244
BstSCI CCNGG 1 cut(s) 390
BstSFI CTRYAG 5 cut(s) 291, 869, 1313, 1376, 1494
BstSNI TACGTA 1 cut(s) 570
BstUI CGCG 1 cut(s) 651
BstV1I GCAGC 4 cut(s) 88, 495, 1480, 1508
BstV2I GAAGAC 1 cut(s) 470
BstX2I RGATCY 2 cut(s) 590, 688
BstYI RGATCY 2 cut(s) 590, 688
BsuI GTATCC 1 cut(s) 128
BsuRI GGCC 4 cut(s) 748, 918, 1372, 1413
BtsCI GGATG 1 cut(s) 847
BtsI GCAGTG 1 cut(s) 1373
BtsIMutI CAGTG 3 cut(s) 714, 887, 1373
Cac8I GCNNGC 1 cut(s) 1149
CciI TCATGA 1 cut(s) 228
CfoI GCGC 2 cut(s) 322, 653
Cfr10I RCCGGY 1 cut(s) 1345
Cfr13I GGNCC 2 cut(s) 746, 1411
Csp6I GTAC 2 cut(s) 192, 395
CspAI ACCGGT 1 cut(s) 1345
CviAII CATG 4 cut(s) 17, 229, 1208, 1271
CviQI GTAC 2 cut(s) 192, 395
DdeI CTNAG 8 cut(s) 429, 544, 698, 774, 890, 964, 987, 1358
DpnI GATC 9 cut(s) 60, 540, 592, 599, 648, 690, 1048, 1140, 1363
DpnII GATC 9 cut(s) 58, 538, 590, 597, 646, 688, 1046, 1138, 1361
DraIII CACNNNGTG 1 cut(s) 893
EaeI YGGCCR 1 cut(s) 916
Eam1104I CTCTTC 1 cut(s) 559
EarI CTCTTC 1 cut(s) 559
Eco105I TACGTA 1 cut(s) 570
Eco130I CCWWGG 3 cut(s) 308, 415, 1212
Eco31I GGTCTC 2 cut(s) 716, 1014
Eco57I CTGAAG 1 cut(s) 482
Eco88I CYCGRG 1 cut(s) 1056
EcoNI CCTNNNNNAGG 1 cut(s) 294
EcoT14I CCWWGG 3 cut(s) 308, 415, 1212
ErhI CCWWGG 3 cut(s) 308, 415, 1212
FaeI CATG 4 cut(s) 20, 232, 1211, 1274
FalI AAGNNNNNCTT 2 cut(s) 594, 626
FaqI GGGAC 2 cut(s) 433, 846
FatI CATG 4 cut(s) 16, 228, 1207, 1270
FblI GTMKAC 1 cut(s) 1052
Fnu4HI GCNGC 5 cut(s) 102, 484, 1494, 1497, 1500
FokI GGATG 1 cut(s) 854
Fsp4HI GCNGC 5 cut(s) 102, 484, 1494, 1497, 1500
FspBI CTAG 2 cut(s) 1322, 1439
GlaI GCGC 2 cut(s) 321, 652
GluI GCNGC 5 cut(s) 102, 484, 1494, 1497, 1500
GsuI CTGGAG 1 cut(s) 788
HaeII RGCGCY 1 cut(s) 323
HaeIII GGCC 4 cut(s) 748, 918, 1372, 1413
HapII CCGG 3 cut(s) 392, 1017, 1346
HhaI GCGC 2 cut(s) 322, 653
Hin1II CATG 4 cut(s) 20, 232, 1211, 1274
Hin6I GCGC 2 cut(s) 320, 651
HinP1I GCGC 2 cut(s) 320, 651
HinfI GANTC 8 cut(s) 260, 341, 353, 431, 494, 968, 983, 1280
HpaII CCGG 3 cut(s) 392, 1017, 1346
HphI GGTGA 2 cut(s) 348, 791
Hpy166II GTNNAC 4 cut(s) 259, 1053, 1239, 1291
Hpy188I TCNGA 6 cut(s) 265, 346, 430, 597, 1143, 1279
Hpy188III TCNNGA 8 cut(s) 32, 197, 215, 229, 455, 580, 805, 1017
Hpy8I GTNNAC 4 cut(s) 259, 1053, 1239, 1291
HpyAV CCTTC 4 cut(s) 38, 247, 290, 941
HpyCH4III ACNGT 4 cut(s) 1003, 1246, 1462, 1475
HpyCH4IV ACGT 2 cut(s) 569, 852
HpyCH4V TGCA 9 cut(s) 135, 483, 668, 1131, 1300, 1315, 1334, 1378, 1496
HpyF10VI GCNNNNNNNGC 5 cut(s) 319, 650, 665, 1331, 1499
HpyF3I CTNAG 8 cut(s) 429, 544, 698, 774, 890, 964, 987, 1358
HpySE526I ACGT 2 cut(s) 569, 852
Hsp92II CATG 4 cut(s) 20, 232, 1211, 1274
HspAI GCGC 2 cut(s) 320, 651
Kpn2I TCCGGA 1 cut(s) 1016
Kzo9I GATC 9 cut(s) 58, 538, 590, 597, 646, 688, 1046, 1138, 1361
LmnI GCTCC 3 cut(s) 457, 1216, 1507
Lsp1109I GCAGC 4 cut(s) 88, 495, 1480, 1508
LweI GCATC 1 cut(s) 631
MaeI CTAG 2 cut(s) 1322, 1439
MaeII ACGT 2 cut(s) 569, 852
MalI GATC 9 cut(s) 60, 540, 592, 599, 648, 690, 1048, 1140, 1363
MbiI CCGCTC 1 cut(s) 659
MboI GATC 9 cut(s) 58, 538, 590, 597, 646, 688, 1046, 1138, 1361
MboII GAAGA 9 cut(s) 475, 546, 600, 698, 956, 1045, 1214, 1301, 1397
MfeI CAATTG 1 cut(s) 912
MflI RGATCY 2 cut(s) 590, 688
MhlI GDGCHC 1 cut(s) 236
MlsI TGGCCA 1 cut(s) 918
MluCI AATT 6 cut(s) 181, 283, 672, 912, 926, 976
MluNI TGGCCA 1 cut(s) 918
MlyI GAGTC 2 cut(s) 254, 440
MmeI TCCRAC 1 cut(s) 522
MnlI CCTC 6 cut(s) 812, 945, 1137, 1196, 1294, 1362
Mox20I TGGCCA 1 cut(s) 918
MroI TCCGGA 1 cut(s) 1016
MscI TGGCCA 1 cut(s) 918
MseI TTAA 6 cut(s) 50, 171, 470, 513, 606, 992
MslI CAYNNNNRTG 1 cut(s) 775
Msp20I TGGCCA 1 cut(s) 918
MspA1I CMGCKG 1 cut(s) 406
MspI CCGG 3 cut(s) 392, 1017, 1346
MspR9I CCNGG 1 cut(s) 392
MunI CAATTG 1 cut(s) 912
MvnI CGCG 1 cut(s) 651
MwoI GCNNNNNNNGC 5 cut(s) 319, 650, 665, 1331, 1499
NciI CCSGG 1 cut(s) 392
NdeII GATC 9 cut(s) 58, 538, 590, 597, 646, 688, 1046, 1138, 1361
NlaIII CATG 4 cut(s) 20, 232, 1211, 1274
NlaIV GGNNCC 2 cut(s) 213, 952
NmeAIII GCCGAG 1 cut(s) 184
NspI RCATGY 1 cut(s) 1211
NspV TTCGAA 1 cut(s) 971
OliI CACNNNNGTG 1 cut(s) 775
PagI TCATGA 1 cut(s) 228
PfeI GAWTC 6 cut(s) 341, 353, 494, 968, 983, 1280
PflMI CCANNNNNTGG 1 cut(s) 1232
PinAI ACCGGT 1 cut(s) 1345
PkrI GCNGC 5 cut(s) 103, 485, 1495, 1498, 1501
PleI GAGTC 2 cut(s) 254, 439
PpsI GAGTC 2 cut(s) 254, 439
Ppu21I YACGTR 1 cut(s) 570
PshAI GACNNNNGTC 1 cut(s) 1244
PshBI ATTAAT 1 cut(s) 513
PspN4I GGNNCC 2 cut(s) 213, 952
PspPI GGNCC 2 cut(s) 746, 1411
PstI CTGCAG 3 cut(s) 1317, 1380, 1498
PsuI RGATCY 2 cut(s) 590, 688
PvuII CAGCTG 1 cut(s) 406
RsaI GTAC 2 cut(s) 193, 396
RsaNI GTAC 2 cut(s) 192, 395
RseI CAYNNNNRTG 1 cut(s) 775
SaqAI TTAA 6 cut(s) 50, 171, 470, 513, 606, 992
SatI GCNGC 5 cut(s) 102, 484, 1494, 1497, 1500
Sau3AI GATC 9 cut(s) 58, 538, 590, 597, 646, 688, 1046, 1138, 1361
Sau96I GGNCC 2 cut(s) 746, 1411
SchI GAGTC 2 cut(s) 254, 440
ScrFI CCNGG 1 cut(s) 392
SduI GDGCHC 1 cut(s) 236
SfaNI GCATC 1 cut(s) 631
SfcI CTRYAG 5 cut(s) 291, 869, 1313, 1376, 1494
SfuI TTCGAA 1 cut(s) 971
SmiMI CAYNNNNRTG 1 cut(s) 775
SmlI CTYRAG 3 cut(s) 195, 314, 704
SmoI CTYRAG 3 cut(s) 195, 314, 704
SnaBI TACGTA 1 cut(s) 570
Sse9I AATT 6 cut(s) 181, 283, 672, 912, 926, 976
SsiI CCGC 3 cut(s) 121, 657, 1425
SspMI CTAG 2 cut(s) 1322, 1439
StyD4I CCNGG 1 cut(s) 390
StyI CCWWGG 3 cut(s) 308, 415, 1212
TaaI ACNGT 4 cut(s) 1003, 1246, 1462, 1475
TaiI ACGT 2 cut(s) 572, 855
TaqI TCGA 6 cut(s) 57, 434, 579, 971, 1075, 1470
TaqII GACCGA 1 cut(s) 1061
TasI AATT 6 cut(s) 181, 283, 672, 912, 926, 976
TfiI GAWTC 6 cut(s) 341, 353, 494, 968, 983, 1280
Tru1I TTAA 6 cut(s) 50, 171, 470, 513, 606, 992
Tru9I TTAA 6 cut(s) 50, 171, 470, 513, 606, 992
TscAI CASTG 3 cut(s) 721, 894, 1380
TseI GCWGC 5 cut(s) 101, 483, 1493, 1496, 1499
TspDTI ATGAA 5 cut(s) 217, 354, 863, 891, 1107
TspRI CASTG 3 cut(s) 721, 894, 1380
Van91I CCANNNNNTGG 1 cut(s) 1232
VspI ATTAAT 1 cut(s) 513
XagI CCTNNNNNAGG 1 cut(s) 294
XapI RAATTY 2 cut(s) 672, 976
XceI RCATGY 1 cut(s) 1211
XcmI CCANNNNNNNNNTGG 1 cut(s) 1233
XmiI GTMKAC 1 cut(s) 1052
XspI CTAG 2 cut(s) 1322, 1439
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.