Rmu_sc0000724.1_g000008

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000724.1
OG0000079
Physical Location & Seq
Reverse (-)
48041 .. 50781
2741 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000724.1_g000008.1.cds

Sequence Viewer

Length: 1488 bp
atgggctcaaactggaagctttttaaagcatgtattgaagataggatcagtggattgccagatgcaattcttttccacattatttcattccttgaaagaagagatgctgtaaagacttgcctattatctcatagatggaacaatgtgtggacttatgttccgaatctagaggtatatgtatcttcaccgaaatatgactcagatgaacatgtccgtcgggccgggtttgttgatcgagtacctctgttccgtaacttgtcaaacattaataaattccgtcttatctgccttggaatcgaagattattttgatcgtattgatacttgggtttgcactgccattaggcgtaatgttgtagaacttgaacttgatccacaccctcaaattcctacacaggatcatgttattgctatccctcctaactcaagttgttttccaagtctcaagtaccttgatgttcaggtaaattatcctgttgctatcgactcagtggcaaaactgttttcgtgttgtttctctgcacttgaaggtttaattatacatggaaatctcggaagacttagagatgatgaagttttgaacttaactatccctgctcctaaactcaaaagactacagatgagattctgtgctgttccagaggatgacccttatgctagggatggagggtatgagtacaaaatttttgttaatgctaatgctccaaaccttgaaaagttcaatgtcaagtaccttttggcaagctattctttgaagaatgtaaaatcgctaagcacagttgagcttaaattcaaaggatgggggactgatgagaaggccatcatctgcttactgggtcatagaaatgcagctcaaagaaaagaaatcagggtcgtttatgagcaactttatcaagaagatattatcaagcaccttaagtctgagctctctggtgattttgagagagcagtgtaccgttggacattggatccagctgattgtgatgctgttttggctaatctggccatcaagaaacccgattgcaactacaatgtcatcattgaaatcttcagtgttcggtgtcctgaagagcttctggctgtaagaaaagcttaccagcttcgttacaagtgctctttggaagaagatctagctcaacgtaccaatggtgatctccgcaagaatttcttggaggatggggctaatgatttccagaaggcattacatagtgccgttcgattcctcaatgaccacaagaagtaccttgagaaggtacttcgcaaggtgatcatagggaccaggaccgatgaggatgctttcactcgtgtgattgttacaagggcagaggaggacttgaaggacatcatggatgtttactacaagaagaacagtgttcctcttgaacaggctgtggctcaagacacttcaggggactacatgaccttcctccttactctgttgggaaaggaggactgggatccttcgctgagcaaattcgaatcaagctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

495

Amino Acids

57.0

Weight (kDa)

6.26

Isoelectric Point (pI)

40.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 1156
AclWI GGATC 7 cut(s) 53, 365, 405, 962, 975, 1451, 1464
AcoI YGGCCR 1 cut(s) 1002
AcsI RAATTY 6 cut(s) 272, 384, 681, 788, 1162, 1472
AcuI CTGAAG 3 cut(s) 1033, 1086, 1389
AfaI GTAC 8 cut(s) 240, 449, 677, 731, 953, 1141, 1241, 1254
AfiI CCNNNNNNNGG 1 cut(s) 1249
AflII CTTAAG 1 cut(s) 914
AflIII ACRYGT 1 cut(s) 208
AjnI CCWGG 1 cut(s) 1277
AleI CACNNNNGTG 1 cut(s) 1304
Alw21I GWGCWC 2 cut(s) 927, 1115
Alw26I GTCTC 1 cut(s) 446
AlwI GGATC 7 cut(s) 53, 365, 405, 962, 975, 1451, 1464
AoxI GGCC 3 cut(s) 219, 816, 1002
ApeKI GCWGC 1 cut(s) 848
ApoI RAATTY 6 cut(s) 272, 384, 681, 788, 1162, 1472
AseI ATTAAT 1 cut(s) 267
Asp700I GAANNNNTTC 1 cut(s) 1071
AspS9I GGNCC 3 cut(s) 219, 1275, 1281
AsuC2I CCSGG 1 cut(s) 223
AsuHPI GGTGA 4 cut(s) 177, 944, 1160, 1276
AsuII TTCGAA 1 cut(s) 1476
AvaII GGWCC 2 cut(s) 1275, 1281
BaeI ACNNNNGTAYC 2 cut(s) 312, 345
BalI TGGCCA 1 cut(s) 1004
BamHI GGATCC 2 cut(s) 967, 1456
BanII GRGCYC 2 cut(s) 8, 927
BauI CACGAG 1 cut(s) 1302
BbsI GAAGAC 1 cut(s) 562
Bbv12I GWGCWC 2 cut(s) 927, 1115
BbvI GCAGC 1 cut(s) 860
BccI CCATC 6 cut(s) 129, 656, 792, 827, 1013, 1169
BceAI ACGGC 1 cut(s) 1196
BcgI CGANNNNNNTGC 2 cut(s) 1274, 1308
BciT130I CCWGG 1 cut(s) 1279
BclI TGATCA 1 cut(s) 1266
BcnI CCSGG 1 cut(s) 223
BcoDI GTCTC 1 cut(s) 446
BfaI CTAG 4 cut(s) 167, 657, 1130, 1486
BfmI CTRYAG 1 cut(s) 614
BfrI CTTAAG 1 cut(s) 914
BglII AGATCT 1 cut(s) 1126
BisI GCNGC 1 cut(s) 849
BlpI GCTNAGC 2 cut(s) 770, 1466
BlsI GCNGC 1 cut(s) 850
Bme1390I CCNGG 2 cut(s) 223, 1279
Bme18I GGWCC 2 cut(s) 1275, 1281
BmgT120I GGNCC 3 cut(s) 219, 1275, 1281
BmiI GGNNCC 3 cut(s) 969, 1276, 1458
BmrFI CCNGG 2 cut(s) 223, 1279
BmrI ACTGGG 2 cut(s) 842, 1462
BmsI GCATC 4 cut(s) 52, 94, 973, 1282
BmuI ACTGGG 2 cut(s) 842, 1462
BpiI GAAGAC 1 cut(s) 562
Bpu1102I GCTNAGC 2 cut(s) 770, 1466
Bpu14I TTCGAA 1 cut(s) 1476
BpuEI CTTGAG 4 cut(s) 409, 428, 1265, 1380
BpuMI CCSGG 1 cut(s) 223
BsaJI CCNNGG 1 cut(s) 289
Bsc4I CCNNNNNNNGG 1 cut(s) 1249
Bse1I ACTGG 3 cut(s) 17, 837, 1457
BseBI CCWGG 1 cut(s) 1279
BseDI CCNNGG 1 cut(s) 289
BseGI GGATG 6 cut(s) 649, 667, 803, 1180, 1297, 1354
BseLI CCNNNNNNNGG 1 cut(s) 1249
BseMII CTCAG 4 cut(s) 213, 501, 912, 1457
BseNI ACTGG 3 cut(s) 17, 837, 1457
BseRI GAGGAG 1 cut(s) 1340
BseXI GCAGC 1 cut(s) 860
BsgI GTGCAG 1 cut(s) 504
BshFI GGCC 3 cut(s) 221, 818, 1004
BsiHKAI GWGCWC 2 cut(s) 927, 1115
BsiSI CCGG 1 cut(s) 222
BslFI GGGAC 3 cut(s) 817, 1288, 1424
BslI CCNNNNNNNGG 1 cut(s) 1249
BsmAI GTCTC 1 cut(s) 446
BsmFI GGGAC 3 cut(s) 817, 1288, 1424
BsnI GGCC 3 cut(s) 221, 818, 1004
Bsp119I TTCGAA 1 cut(s) 1476
Bsp1286I GDGCHC 3 cut(s) 8, 927, 1115
Bsp1720I GCTNAGC 2 cut(s) 770, 1466
BspACI CCGC 1 cut(s) 1156
BspANI GGCC 3 cut(s) 221, 818, 1004
BspCNI CTCAG 4 cut(s) 212, 500, 913, 1458
BspLI GGNNCC 3 cut(s) 969, 1276, 1458
BspPI GGATC 7 cut(s) 53, 365, 405, 962, 975, 1451, 1464
BspQI GCTCTTC 1 cut(s) 1062
BspT104I TTCGAA 1 cut(s) 1476
BspTI CTTAAG 1 cut(s) 914
BsrI ACTGG 3 cut(s) 17, 837, 1457
BssECI CCNNGG 1 cut(s) 289
BssSI CACGAG 1 cut(s) 1302
BssT1I CCWWGG 1 cut(s) 289
Bst2BI CACGAG 1 cut(s) 1302
Bst2UI CCWGG 1 cut(s) 1279
Bst4CI ACNGT 4 cut(s) 501, 778, 956, 1370
Bst6I CTCTTC 2 cut(s) 94, 1062
BstAFI CTTAAG 1 cut(s) 914
BstBI TTCGAA 1 cut(s) 1476
BstC8I GCNNGC 1 cut(s) 742
BstDEI CTNAG 6 cut(s) 199, 487, 560, 770, 921, 1466
BstENI CCTNNNNNAGG 1 cut(s) 1247
BstF5I GGATG 6 cut(s) 649, 667, 803, 1180, 1297, 1354
BstMAI GTCTC 1 cut(s) 446
BstMWI GCNNNNNNNGC 2 cut(s) 992, 1001
BstNI CCWGG 1 cut(s) 1279
BstNSI RCATGY 2 cut(s) 33, 212
BstSCI CCNGG 2 cut(s) 221, 1277
BstSFI CTRYAG 1 cut(s) 614
BstV1I GCAGC 1 cut(s) 860
BstV2I GAAGAC 1 cut(s) 562
BstX2I RGATCY 3 cut(s) 967, 1126, 1456
BstYI RGATCY 3 cut(s) 967, 1126, 1456
BsuRI GGCC 3 cut(s) 221, 818, 1004
BtsCI GGATG 6 cut(s) 649, 667, 803, 1180, 1297, 1354
BtsI GCAGTG 2 cut(s) 333, 954
BtsIMutI CAGTG 6 cut(s) 55, 333, 495, 954, 1057, 1375
Cac8I GCNNGC 1 cut(s) 742
Cfr13I GGNCC 3 cut(s) 219, 1275, 1281
Csp6I GTAC 8 cut(s) 239, 448, 676, 730, 952, 1140, 1240, 1253
CviAII CATG 6 cut(s) 30, 209, 401, 542, 1345, 1417
CviQI GTAC 8 cut(s) 239, 448, 676, 730, 952, 1140, 1240, 1253
DdeI CTNAG 6 cut(s) 199, 487, 560, 770, 921, 1466
DraI TTTAAA 1 cut(s) 25
EaeI YGGCCR 1 cut(s) 1002
Eam1104I CTCTTC 2 cut(s) 94, 1062
EarI CTCTTC 2 cut(s) 94, 1062
Ecl136II GAGCTC 1 cut(s) 925
Eco130I CCWWGG 1 cut(s) 289
Eco24I GRGCYC 2 cut(s) 8, 927
Eco47I GGWCC 2 cut(s) 1275, 1281
Eco53kI GAGCTC 1 cut(s) 925
Eco57I CTGAAG 3 cut(s) 1033, 1086, 1389
EcoICRI GAGCTC 1 cut(s) 925
EcoNI CCTNNNNNAGG 1 cut(s) 1247
EcoRII CCWGG 1 cut(s) 1277
EcoT14I CCWWGG 1 cut(s) 289
EcoT38I GRGCYC 2 cut(s) 8, 927
ErhI CCWWGG 1 cut(s) 289
FaeI CATG 6 cut(s) 33, 212, 404, 545, 1348, 1420
FalI AAGNNNNNCTT 6 cut(s) 733, 765, 1075, 1107, 1151, 1183
FaqI GGGAC 3 cut(s) 817, 1288, 1424
FatI CATG 6 cut(s) 29, 208, 400, 541, 1344, 1416
FbaI TGATCA 1 cut(s) 1266
Fnu4HI GCNGC 1 cut(s) 849
FokI GGATG 6 cut(s) 656, 674, 810, 1187, 1304, 1361
FriOI GRGCYC 2 cut(s) 8, 927
Fsp4HI GCNGC 1 cut(s) 849
FspBI CTAG 4 cut(s) 167, 657, 1130, 1486
GluI GCNGC 1 cut(s) 849
HaeIII GGCC 3 cut(s) 221, 818, 1004
HapII CCGG 1 cut(s) 222
Hin1II CATG 6 cut(s) 33, 212, 404, 545, 1348, 1420
HindIII AAGCTT 2 cut(s) 17, 1089
HinfI GANTC 7 cut(s) 163, 197, 294, 485, 624, 1218, 1478
HpaII CCGG 1 cut(s) 222
HphI GGTGA 4 cut(s) 177, 944, 1160, 1276
Hpy166II GTNNAC 3 cut(s) 150, 952, 1354
Hpy188I TCNGA 4 cut(s) 162, 202, 554, 922
Hpy188III TCNNGA 8 cut(s) 167, 638, 893, 1009, 1064, 1192, 1379, 1397
Hpy8I GTNNAC 3 cut(s) 150, 952, 1354
Hpy99I CGWCG 1 cut(s) 219
HpyAV CCTTC 7 cut(s) 521, 808, 1189, 1243, 1330, 1432, 1470
HpyCH4III ACNGT 4 cut(s) 501, 778, 956, 1370
HpyCH4IV ACGT 1 cut(s) 1138
HpyCH4V TGCA 5 cut(s) 65, 333, 521, 848, 1023
HpyF10VI GCNNNNNNNGC 2 cut(s) 992, 1001
HpyF3I CTNAG 6 cut(s) 199, 487, 560, 770, 921, 1466
HpySE526I ACGT 1 cut(s) 1138
Hsp92II CATG 6 cut(s) 33, 212, 404, 545, 1348, 1420
Ksp22I TGATCA 1 cut(s) 1266
LguI GCTCTTC 1 cut(s) 1062
LmnI GCTCC 2 cut(s) 601, 706
Lsp1109I GCAGC 1 cut(s) 860
LweI GCATC 4 cut(s) 52, 94, 973, 1282
MaeI CTAG 4 cut(s) 167, 657, 1130, 1486
MaeII ACGT 1 cut(s) 1138
MaeIII GTNAC 3 cut(s) 251, 1103, 1312
MflI RGATCY 3 cut(s) 967, 1126, 1456
MhlI GDGCHC 3 cut(s) 8, 927, 1115
MlsI TGGCCA 1 cut(s) 1004
MluCI AATT 9 cut(s) 66, 272, 384, 466, 534, 681, 788, 1162, 1472
MluNI TGGCCA 1 cut(s) 1004
MlyI GAGTC 2 cut(s) 191, 479
MmeI TCCRAC 1 cut(s) 938
Mox20I TGGCCA 1 cut(s) 1004
MroXI GAANNNNTTC 1 cut(s) 1071
MscI TGGCCA 1 cut(s) 1004
MseI TTAA 7 cut(s) 24, 267, 533, 584, 690, 786, 915
MslI CAYNNNNRTG 2 cut(s) 843, 1304
Msp20I TGGCCA 1 cut(s) 1004
MspA1I CMGCKG 1 cut(s) 974
MspCI CTTAAG 1 cut(s) 914
MspI CCGG 1 cut(s) 222
MspR9I CCNGG 2 cut(s) 223, 1279
MvaI CCWGG 1 cut(s) 1279
MwoI GCNNNNNNNGC 2 cut(s) 992, 1001
NciI CCSGG 1 cut(s) 223
NlaIII CATG 6 cut(s) 33, 212, 404, 545, 1348, 1420
NlaIV GGNNCC 3 cut(s) 969, 1276, 1458
NspI RCATGY 2 cut(s) 33, 212
NspV TTCGAA 1 cut(s) 1476
OliI CACNNNNGTG 1 cut(s) 1304
PciI ACATGT 1 cut(s) 208
PciSI GCTCTTC 1 cut(s) 1062
PdmI GAANNNNTTC 1 cut(s) 1071
PfeI GAWTC 5 cut(s) 163, 294, 624, 1218, 1478
PkrI GCNGC 1 cut(s) 850
PleI GAGTC 2 cut(s) 191, 479
PpsI GAGTC 2 cut(s) 191, 479
PscI ACATGT 1 cut(s) 208
PshBI ATTAAT 1 cut(s) 267
Psp124BI GAGCTC 1 cut(s) 927
Psp6I CCWGG 1 cut(s) 1277
PspGI CCWGG 1 cut(s) 1277
PspN4I GGNNCC 3 cut(s) 969, 1276, 1458
PspPI GGNCC 3 cut(s) 219, 1275, 1281
PsuI RGATCY 3 cut(s) 967, 1126, 1456
PvuII CAGCTG 1 cut(s) 974
RsaI GTAC 8 cut(s) 240, 449, 677, 731, 953, 1141, 1241, 1254
RsaNI GTAC 8 cut(s) 239, 448, 676, 730, 952, 1140, 1240, 1253
RseI CAYNNNNRTG 2 cut(s) 843, 1304
SacI GAGCTC 1 cut(s) 927
SapI GCTCTTC 1 cut(s) 1062
SaqAI TTAA 7 cut(s) 24, 267, 533, 584, 690, 786, 915
SatI GCNGC 1 cut(s) 849
Sau96I GGNCC 3 cut(s) 219, 1275, 1281
SchI GAGTC 2 cut(s) 191, 479
ScrFI CCNGG 2 cut(s) 223, 1279
SduI GDGCHC 3 cut(s) 8, 927, 1115
SfaNI GCATC 4 cut(s) 52, 94, 973, 1282
SfcI CTRYAG 1 cut(s) 614
SfuI TTCGAA 1 cut(s) 1476
SinI GGWCC 2 cut(s) 1275, 1281
SmiMI CAYNNNNRTG 2 cut(s) 843, 1304
SmlI CTYRAG 5 cut(s) 424, 443, 914, 1244, 1395
SmoI CTYRAG 5 cut(s) 424, 443, 914, 1244, 1395
Sse9I AATT 9 cut(s) 66, 272, 384, 466, 534, 681, 788, 1162, 1472
SsiI CCGC 1 cut(s) 1156
SspMI CTAG 4 cut(s) 167, 657, 1130, 1486
SstI GAGCTC 1 cut(s) 927
StyD4I CCNGG 2 cut(s) 221, 1277
StyI CCWWGG 1 cut(s) 289
TaaI ACNGT 4 cut(s) 501, 778, 956, 1370
TaiI ACGT 1 cut(s) 1141
TaqI TCGA 5 cut(s) 235, 297, 483, 1216, 1476
TaqII GACCGA 1 cut(s) 1298
TasI AATT 9 cut(s) 66, 272, 384, 466, 534, 681, 788, 1162, 1472
TatI WGTACW 1 cut(s) 675
TfiI GAWTC 5 cut(s) 163, 294, 624, 1218, 1478
Tru1I TTAA 7 cut(s) 24, 267, 533, 584, 690, 786, 915
Tru9I TTAA 7 cut(s) 24, 267, 533, 584, 690, 786, 915
TscAI CASTG 6 cut(s) 55, 340, 495, 954, 1057, 1375
TseI GCWGC 1 cut(s) 848
TspDTI ATGAA 3 cut(s) 75, 219, 585
TspGWI ACGGA 3 cut(s) 203, 239, 266
TspRI CASTG 6 cut(s) 55, 340, 495, 954, 1057, 1375
Vha464I CTTAAG 1 cut(s) 914
VpaK11BI GGWCC 2 cut(s) 1275, 1281
VspI ATTAAT 1 cut(s) 267
XagI CCTNNNNNAGG 1 cut(s) 1247
XapI RAATTY 6 cut(s) 272, 384, 681, 788, 1162, 1472
XbaI TCTAGA 1 cut(s) 166
XceI RCATGY 2 cut(s) 33, 212
XmnI GAANNNNTTC 1 cut(s) 1071
XspI CTAG 4 cut(s) 167, 657, 1130, 1486
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.