FvH4_4g16652

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000143
Physical Location & Seq
Forward (+)
20528069 .. 20530134
2066 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g16652.t1

Sequence Viewer

Length: 1698 bp
ATGTTTATTACGGATTGGAATAGTTTGGTGGATTCCCTAACTGAGGATGACTATCTGAGGAACCTTGCTGCTCTAGAAGTGAAATATTTTGCATATGCTAAGGAGATGAATTATCTGAAGACCACTTGGCTAAATAAGTATAAGGAATTGTTTGTTGCGGCATGGACAAGCAAATACATGCATCTTGGTGCTAGAACTTCCAACCGGGTGGAAAGTGCACATGCAAAGCTTAAGCGAGAGCTTAAGTCTTCCCAACTTGATTTCAGCGTGTCATGGGAGCATATTCACTCGTTATTGTGCTTACATCACGTTGAAGTTAAAGCTTCATTTGAAAAGAGCCGGTGCTTTGTGCAACACGACTTCAGACATACATACTTGAGAGATTTGATAGGATTCGTGTCAATTTCTGCGTTGAACATGATTGTGTGTGAAGCGAACAATGCTGATAATATTGGACAAGAACTTGCATTATGCAATTGTGCTATTCGAAAAACGCATGGACTGCCTTGCGCACATGAGATAGCTGAATATAAACTTCGTGACCGTCCCATACCACTATCATCTGTGCATCGCCACTGGAGAAGGTTAGAGATCATAACAACTACAGAAGACTCGGAATTACCTGACAAAGTTCCTGTAAAAACTCATTTAGATCGCTTAGCAGAGTGGGCTGAAGTACAAGATGAGGAAACAAAACGTCAAATATTGGTGAAGATCGATGAGCTGATGAATCCAAGTTGTACCTTACTTAAAGAACCAGCTGAAAAGATAAAAACTAAAGGCCGTCCAAGTAAGGTAGACGCTAGTACACGTCGTTGCCCATCCGGATTTGAGATCGTAGATGCATTGTTATCTGAGCGTGATAGTCCATCTTCAATACCAAGTGCTCAAAAGGGAACTAGTACGTCACATGGCAAGAAAGCAAATGATCAAGCTGAGAAAACTAAGTCAAACAAACCAACTTCAAAAGATCCAAGGTTTGAGATAACTCAAAAGTATTCAATGCAATATATCTTTGGCATGAGGCCATATATTACCGGTTCAATGGATGTTGAAGATGATGGTAATTGTGATTTTAGAGTTGTAGCAGCAGCTATGGGTTTCGGTAGAAAACATTGGCGTAAAGTGAGAACTGATTTAATAAATGGAGATGAGTTAGAAGGCATCCCTAATATTTATGAAGGTCTCTTTGGAGGACCATCTGGTGTCGAACGACTTCATCGTCGACTAAACCATTTTGCATCTAATATGGCACCCAAAGCAAGATGGATGGATTGTCCAGACATGGGCCATTTAATAGCAACTTGTTATGGAGTACTGGTGGTGAACATATCAGATGGTCAATGCTTCACATTTCTTCCATTACATGAGTATGTTGAGGGAAAGCTAATGGAAGCAGACTTGCATGAGATAGGCATTGGATTTGTGAACAGTAATCACTTTGTGCAGATTTGCTTTGTGCCAGGACACCCACTGCCCCCGGTTCCACCAAATTGGATATACCATGCCGACGATGCAGCTAAGAGTTTGTACCTTCGATATCAAGATCGTTTCCAGCAATATACTCAGTTGCCACATCCTGAAAGAGTAGTCAATACATCCTCAAGTATTATGGTATTTGATGATGAACAAACCACTCCATTTGTTGATGTTATAATGTTCGACGAAGACAATGCAATACATCTTAGCGATCACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AFT FAR1 MULE

Protein Analysis

566

Amino Acids

64.58

Weight (kDa)

6.23

Isoelectric Point (pI)

37.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000143)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G76710 AT1G76710 AT1G76710 AT1G76710
fragaria_vesca FvH4_1g20063 FvH4_2g15231 FvH4_3g04011 FvH4_3g28681 FvH4_4g01411 FvH4_4g10181 FvH4_4g15922 FvH4_4g16651 FvH4_4g16652 FvH4_5g13892 FvH4_5g13893 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g25511 FvH4_6g12551 FvH4_6g12552 FvH4_6g38841 FvH4_7g04391
malus_domestica MD05G1031300.v1.1 MD05G1031400.v1.1 MD05G1031500.v1.1 MD08G1164400.v1.1 MD10G1032900.v1.1 MD10G1033000.v1.1 MD10G1033100.v1.1
prunus_persica Prupe.3G240700_v2.0.a1 Prupe.7G144600_v2.0.a1 Prupe.8G038500_v2.0.a1 Prupe.8G038500_v2.0.a1
pyrus_communis pycom05g02250 pycom05g02260 pycom05g02270 pycom05g02280 pycom08g14160 pycom10g02100 pycom10g02110 pycom10g02130
rosa_chinensis RchiOBHm_Chr1g0329481 RchiOBHm_Chr1g0329491 RchiOBHm_Chr1g0341531 RchiOBHm_Chr3g0464811 RchiOBHm_Chr3g0494701 RchiOBHm_Chr3g0497501 RchiOBHm_Chr4g0385841 RchiOBHm_Chr5g0061181 RchiOBHm_Chr6g0263001 RchiOBHm_Chr7g0193111 RchiOBHm_Chr7g0206281 RchiOBHm_Chr7g0206311
rosa_laevigata RLG00000018908 RLG00000028528 RLG00000028803 RLG00000029882 RLG00000029883 RLG00000030361
rosa_multiflora Rmu_co8196328.1_g000001 Rmu_co8259135.1_g000001 Rmu_co8269185.1_g000001 Rmu_sc0000076.1_g000019 Rmu_sc0000311.1_g000007 Rmu_sc0000429.1_g000038 Rmu_sc0000429.1_g000039 Rmu_sc0000429.1_g000040 Rmu_sc0000511.1_g000005 Rmu_sc0000539.1_g000054 Rmu_sc0000566.1_g000039 Rmu_sc0000805.1_g000032 Rmu_sc0000870.1_g000073 Rmu_sc0000870.1_g000074 Rmu_sc0001010.1_g000018 Rmu_sc0001083.1_g000013 Rmu_sc0001114.1_g000011 Rmu_sc0001702.1_g000027 Rmu_sc0001779.1_g000012 Rmu_sc0002923.1_g000036 Rmu_sc0003242.1_g000011 Rmu_sc0003291.1_g000036 Rmu_sc0003393.1_g000012 Rmu_sc0003872.1_g000016 Rmu_sc0003872.1_g000017 Rmu_sc0003872.1_g000018 Rmu_sc0004084.1_g000020 Rmu_sc0004386.1_g000005 Rmu_sc0004622.1_g000005 Rmu_sc0004742.1_g000021 Rmu_sc0004755.1_g000020 Rmu_sc0004805.1_g000036 Rmu_sc0005065.1_g000006 Rmu_sc0005177.1_g000004 Rmu_sc0006373.1_g000003 Rmu_sc0006373.1_g000004 Rmu_sc0007121.1_g000002 Rmu_sc0007943.1_g000003 Rmu_sc0010368.1_g000006 Rmu_sc0010543.1_g000001 Rmu_sc0012591.1_g000006 Rmu_sc0013504.1_g000009 Rmu_sc0015025.1_g000001 Rmu_sc0016170.1_g000001 Rmu_sc0017156.1_g000001 Rmu_sc0026439.1_g000001
rosa_roxburghii Rroxscaffold_175G00432280 Rroxscaffold_1G00030190 Rroxscaffold_1G00030880 Rroxscaffold_2G00090520 Rroxscaffold_3G00227940 Rroxscaffold_3G00233400 Rroxscaffold_3G00238500 Rroxscaffold_3G00251650 Rroxscaffold_4G00301570 Rroxscaffold_4G00321040 Rroxscaffold_5G00350880 Rroxscaffold_7G00184400
rosa_rugosa Rorug01G0080800 Rorug01G0080900 Rorug01G0193900 Rorug02G0275900 Rorug02G0275900 Rorug02G0275900 Rorug02G0305400 Rorug02G0311800 Rorug02G0350400 Rorug02G0381300 Rorug03G0136700 Rorug03G0181900 Rorug03G0268000 Rorug04G0301600 Rorug05G0175100 Rorug05G0250700 Rorug05G0298200 Rorug05G0596000 Rorug06G0029500 Rorug07G0094300 Rorug07G0094300 Rorug07G0095400 Rorug07G0140100
rosa_samantha Rh1AG099200 Rh1AG190500 Rh1BG078900 Rh1BG079000 Rh1BG079100 Rh1CG084600 Rh1CG084700 Rh1CG095300 Rh1CG175900 Rh1DG103300 Rh1DG150400 Rh2AG079300 Rh2AG272400 Rh2AG464800 Rh2AG507400 Rh2DG078300 Rh2DG078400 Rh3CG206900 Rh3CG295400 Rh3DG206800 Rh3DG356200 Rh4CG071500 Rh4CG179200 Rh4DG064700 Rh5CG362400 Rh7AG212300 Rh7AG226200 Rh7BG222200
rosa_wichuraiana Rw0G009990 Rw0G011260 Rw0G011270 Rw0G012910 Rw0G013740 Rw1G007740 Rw1G013050 Rw1G014230 Rw2G014270 Rw3G012720 Rw3G028110 Rw4G006630 Rw4G015270 Rw4G016160 Rw4G031380 Rw5G011440 Rw5G029180 Rw5G048360 Rw5G048430 Rw5G048780 Rw6G005250 Rw6G006390 Rw7G002840 Rw7G014080 Rw7G019650 Rw7G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1655
AasI GACNNNNNNGTC 1 cut(s) 1221
Acc16I TGCGCA 1 cut(s) 511
AccB1I GGYRCC 1 cut(s) 1252
AccI GTMKAC 2 cut(s) 798, 1225
AccIII TCCGGA 1 cut(s) 824
AciI CCGC 1 cut(s) 158
AclWI GGATC 1 cut(s) 965
AcuI CTGAAG 3 cut(s) 137, 346, 693
AdeI CACNNNGTG 1 cut(s) 1444
AfaI GTAC 6 cut(s) 678, 742, 808, 904, 1317, 1532
AfiI CCNNNNNNNGG 2 cut(s) 43, 1286
AflII CTTAAG 2 cut(s) 230, 242
AflIII ACRYGT 1 cut(s) 809
AgeI ACCGGT 1 cut(s) 1037
AgsI TTSAA 8 cut(s) 314, 332, 415, 876, 966, 1002, 1044, 1055
AhlI ACTAGT 1 cut(s) 899
AjiI CACGTC 1 cut(s) 812
AjnI CCWGG 1 cut(s) 1462
AjuI GAANNNNNNNTTGG 2 cut(s) 1173, 1205
Alw21I GWGCWC 2 cut(s) 220, 889
Alw26I GTCTC 1 cut(s) 1190
Alw44I GTGCAC 1 cut(s) 216
AlwI GGATC 1 cut(s) 965
Aor13HI TCCGGA 1 cut(s) 824
AoxI GGCC 3 cut(s) 781, 1025, 1288
ApaLI GTGCAC 1 cut(s) 216
ApeKI GCWGC 4 cut(s) 68, 1088, 1091, 1517
AsiGI ACCGGT 1 cut(s) 1037
Asp700I GAANNNNTTC 1 cut(s) 1215
AspLEI GCGC 1 cut(s) 512
AspS9I GGNCC 2 cut(s) 1196, 1288
AsuC2I CCSGG 2 cut(s) 206, 1481
AsuHPI GGTGA 2 cut(s) 721, 1336
AsuII TTCGAA 1 cut(s) 487
AvaII GGWCC 1 cut(s) 1196
BaeGI GKGCMC 1 cut(s) 220
BanI GGYRCC 1 cut(s) 1252
BbsI GAAGAC 4 cut(s) 125, 240, 615, 1674
Bbv12I GWGCWC 2 cut(s) 220, 889
BbvI GCAGC 4 cut(s) 55, 1100, 1103, 1529
BccI CCATC 7 cut(s) 829, 877, 1055, 1207, 1260, 1264, 1331
BceAI ACGGC 1 cut(s) 768
BcgI CGANNNNNNTGC 2 cut(s) 1655, 1689
BciT130I CCWGG 1 cut(s) 1464
BclI TGATCA 1 cut(s) 928
BcnI CCSGG 2 cut(s) 206, 1481
BcoDI GTCTC 1 cut(s) 1190
BcuI ACTAGT 1 cut(s) 899
BfaI CTAG 4 cut(s) 74, 192, 804, 900
BfmI CTRYAG 1 cut(s) 603
BfrI CTTAAG 2 cut(s) 230, 242
BisI GCNGC 5 cut(s) 69, 159, 1089, 1092, 1518
BlpI GCTNAGC 1 cut(s) 658
BlsI GCNGC 5 cut(s) 70, 160, 1090, 1093, 1519
BmcAI AGTACT 1 cut(s) 1317
Bme1390I CCNGG 3 cut(s) 206, 1464, 1481
Bme18I GGWCC 1 cut(s) 1196
BmgBI CACGTC 1 cut(s) 812
BmgT120I GGNCC 2 cut(s) 1196, 1288
BmiI GGNNCC 3 cut(s) 62, 1254, 1485
BmrFI CCNGG 3 cut(s) 206, 1464, 1481
BmsI GCATC 6 cut(s) 190, 577, 832, 1173, 1250, 1504
BpiI GAAGAC 4 cut(s) 125, 240, 615, 1674
BpmI CTGGAG 1 cut(s) 598
Bpu10I CCTNAGC 1 cut(s) 99
Bpu1102I GCTNAGC 1 cut(s) 658
Bpu14I TTCGAA 1 cut(s) 487
BpuEI CTTGAG 2 cut(s) 397, 1588
BpuMI CCSGG 2 cut(s) 206, 1481
Bsa29I ATCGAT 1 cut(s) 717
BsaBI GATNNNNATC 1 cut(s) 51
BsaI GGTCTC 1 cut(s) 1190
BsaJI CCNNGG 2 cut(s) 974, 1479
BsaWI WCCGGW 2 cut(s) 824, 1037
BsaXI ACNNNNNCTCC 2 cut(s) 1305, 1335
Bsc4I CCNNNNNNNGG 2 cut(s) 43, 1286
Bse118I RCCGGY 2 cut(s) 339, 1037
Bse1I ACTGG 2 cut(s) 581, 1323
Bse8I GATNNNNATC 1 cut(s) 51
BseAI TCCGGA 1 cut(s) 824
BseBI CCWGG 1 cut(s) 1464
BseCI ATCGAT 1 cut(s) 717
BseDI CCNNGG 2 cut(s) 974, 1479
BseGI GGATG 7 cut(s) 52, 821, 1054, 1164, 1275, 1576, 1598
BseJI GATNNNNATC 1 cut(s) 51
BseLI CCNNNNNNNGG 2 cut(s) 43, 1286
BseMII CTCAG 5 cut(s) 33, 47, 846, 927, 1580
BseNI ACTGG 2 cut(s) 581, 1323
BseSI GKGCMC 1 cut(s) 220
BseXI GCAGC 4 cut(s) 55, 1100, 1103, 1529
BsgI GTGCAG 1 cut(s) 1466
BshFI GGCC 3 cut(s) 783, 1027, 1290
BshNI GGYRCC 1 cut(s) 1252
BshTI ACCGGT 1 cut(s) 1037
BshVI ATCGAT 1 cut(s) 717
BsiHKAI GWGCWC 2 cut(s) 220, 889
BsiSI CCGG 5 cut(s) 205, 340, 825, 1038, 1481
BslFI GGGAC 1 cut(s) 531
BslI CCNNNNNNNGG 2 cut(s) 43, 1286
BsmAI GTCTC 1 cut(s) 1190
BsmFI GGGAC 1 cut(s) 531
BsnI GGCC 3 cut(s) 783, 1027, 1290
Bso31I GGTCTC 1 cut(s) 1190
Bsp119I TTCGAA 1 cut(s) 487
Bsp1286I GDGCHC 2 cut(s) 220, 889
Bsp13I TCCGGA 1 cut(s) 824
Bsp143I GATC 8 cut(s) 591, 652, 714, 834, 928, 970, 1546, 1690
Bsp1720I GCTNAGC 1 cut(s) 658
BspACI CCGC 1 cut(s) 158
BspANI GGCC 3 cut(s) 783, 1027, 1290
BspCNI CTCAG 5 cut(s) 34, 48, 847, 928, 1579
BspDI ATCGAT 1 cut(s) 717
BspEI TCCGGA 1 cut(s) 824
BspLI GGNNCC 3 cut(s) 62, 1254, 1485
BspPI GGATC 1 cut(s) 965
BspT104I TTCGAA 1 cut(s) 487
BspT107I GGYRCC 1 cut(s) 1252
BspTI CTTAAG 2 cut(s) 230, 242
BspTNI GGTCTC 1 cut(s) 1190
BsrFI RCCGGY 2 cut(s) 339, 1037
BsrI ACTGG 2 cut(s) 581, 1323
BssAI RCCGGY 2 cut(s) 339, 1037
BssECI CCNNGG 2 cut(s) 974, 1479
BssMI GATC 8 cut(s) 591, 652, 714, 834, 928, 970, 1546, 1690
BssT1I CCWWGG 1 cut(s) 974
Bst2UI CCWGG 1 cut(s) 1464
Bst4CI ACNGT 2 cut(s) 545, 1433
BstAFI CTTAAG 2 cut(s) 230, 242
BstAPI GCANNNNNTGC 1 cut(s) 502
BstBI TTCGAA 1 cut(s) 487
BstENI CCTNNNNNAGG 1 cut(s) 41
BstF5I GGATG 7 cut(s) 52, 821, 1054, 1164, 1275, 1576, 1598
BstHHI GCGC 1 cut(s) 512
BstKTI GATC 8 cut(s) 594, 655, 717, 837, 931, 973, 1549, 1693
BstMAI GTCTC 1 cut(s) 1190
BstMBI GATC 8 cut(s) 591, 652, 714, 834, 928, 970, 1546, 1690
BstMWI GCNNNNNNNGC 5 cut(s) 440, 502, 668, 1259, 1514
BstNI CCWGG 1 cut(s) 1464
BstNSI RCATGY 2 cut(s) 181, 224
BstSCI CCNGG 3 cut(s) 204, 1462, 1479
BstSFI CTRYAG 1 cut(s) 603
BstSLI GKGCMC 1 cut(s) 220
BstV1I GCAGC 4 cut(s) 55, 1100, 1103, 1529
BstV2I GAAGAC 4 cut(s) 125, 240, 615, 1674
BstX2I RGATCY 1 cut(s) 970
BstXI CCANNNNNNTGG 2 cut(s) 208, 1494
BstYI RGATCY 1 cut(s) 970
Bsu15I ATCGAT 1 cut(s) 717
BsuRI GGCC 3 cut(s) 783, 1027, 1290
BsuTUI ATCGAT 1 cut(s) 717
BtgZI GCGATG 1 cut(s) 554
BtrI CACGTC 1 cut(s) 812
BtsCI GGATG 7 cut(s) 52, 821, 1054, 1164, 1275, 1576, 1598
BtsI GCAGTG 1 cut(s) 1472
BtsIMutI CAGTG 3 cut(s) 574, 1472, 1693
CfoI GCGC 1 cut(s) 512
Cfr10I RCCGGY 2 cut(s) 339, 1037
Cfr13I GGNCC 2 cut(s) 1196, 1288
ClaI ATCGAT 1 cut(s) 717
CseI GACGC 1 cut(s) 809
Csp6I GTAC 6 cut(s) 677, 741, 807, 903, 1316, 1531
CspAI ACCGGT 1 cut(s) 1037
CspCI CAANNNNNGTGG 2 cut(s) 1624, 1659
CviQI GTAC 6 cut(s) 677, 741, 807, 903, 1316, 1531
DpnI GATC 8 cut(s) 593, 654, 716, 836, 930, 972, 1548, 1692
DpnII GATC 8 cut(s) 591, 652, 714, 834, 928, 970, 1546, 1690
DraIII CACNNNGTG 1 cut(s) 1444
DrdI GACNNNNNNGTC 1 cut(s) 1221
DseDI GACNNNNNNGTC 1 cut(s) 1221
Eco130I CCWWGG 1 cut(s) 974
Eco31I GGTCTC 1 cut(s) 1190
Eco32I GATATC 1 cut(s) 1541
Eco47I GGWCC 1 cut(s) 1196
Eco57I CTGAAG 3 cut(s) 137, 346, 693
EcoNI CCTNNNNNAGG 1 cut(s) 41
EcoRII CCWGG 1 cut(s) 1462
EcoRV GATATC 1 cut(s) 1541
EcoT14I CCWWGG 1 cut(s) 974
EcoT22I ATGCAT 2 cut(s) 183, 847
ErhI CCWWGG 1 cut(s) 974
FaqI GGGAC 1 cut(s) 531
FauNDI CATATG 1 cut(s) 94
FbaI TGATCA 1 cut(s) 928
FblI GTMKAC 2 cut(s) 798, 1225
Fnu4HI GCNGC 5 cut(s) 69, 159, 1089, 1092, 1518
FokI GGATG 7 cut(s) 59, 808, 1061, 1151, 1282, 1563, 1585
Fsp4HI GCNGC 5 cut(s) 69, 159, 1089, 1092, 1518
FspBI CTAG 4 cut(s) 74, 192, 804, 900
FspI TGCGCA 1 cut(s) 511
GlaI GCGC 1 cut(s) 511
GluI GCNGC 5 cut(s) 69, 159, 1089, 1092, 1518
GsuI CTGGAG 1 cut(s) 598
HaeIII GGCC 3 cut(s) 783, 1027, 1290
HapII CCGG 5 cut(s) 205, 340, 825, 1038, 1481
HgaI GACGC 1 cut(s) 809
HhaI GCGC 1 cut(s) 512
Hin6I GCGC 1 cut(s) 510
HinP1I GCGC 1 cut(s) 510
HincII GTYRAC 1 cut(s) 1226
HindII GTYRAC 1 cut(s) 1226
HindIII AAGCTT 2 cut(s) 227, 321
HinfI GANTC 4 cut(s) 32, 393, 611, 730
HpaII CCGG 5 cut(s) 205, 340, 825, 1038, 1481
HphI GGTGA 2 cut(s) 721, 1336
Hpy166II GTNNAC 6 cut(s) 218, 799, 809, 1226, 1327, 1429
Hpy188I TCNGA 6 cut(s) 57, 117, 365, 616, 856, 1336
Hpy188III TCNNGA 6 cut(s) 74, 539, 825, 1280, 1544, 1580
Hpy8I GTNNAC 6 cut(s) 218, 799, 809, 1226, 1327, 1429
Hpy99I CGWCG 4 cut(s) 816, 1227, 1514, 1667
HpyAV CCTTC 4 cut(s) 576, 1154, 1175, 1544
HpyCH4III ACNGT 2 cut(s) 545, 1433
HpyCH4IV ACGT 4 cut(s) 309, 697, 811, 905
HpyF10VI GCNNNNNNNGC 5 cut(s) 440, 502, 668, 1259, 1514
HpySE526I ACGT 4 cut(s) 309, 697, 811, 905
HspAI GCGC 1 cut(s) 510
Kpn2I TCCGGA 1 cut(s) 824
Ksp22I TGATCA 1 cut(s) 928
Kzo9I GATC 8 cut(s) 591, 652, 714, 834, 928, 970, 1546, 1690
LmnI GCTCC 1 cut(s) 277
Lsp1109I GCAGC 4 cut(s) 55, 1100, 1103, 1529
LweI GCATC 6 cut(s) 190, 577, 832, 1173, 1250, 1504
MaeI CTAG 4 cut(s) 74, 192, 804, 900
MaeII ACGT 4 cut(s) 309, 697, 811, 905
MaeIII GTNAC 2 cut(s) 539, 906
MalI GATC 8 cut(s) 593, 654, 716, 836, 930, 972, 1548, 1692
MboI GATC 8 cut(s) 591, 652, 714, 834, 928, 970, 1546, 1690
MboII GAAGA 8 cut(s) 130, 240, 620, 724, 864, 1067, 1349, 1679
MfeI CAATTG 1 cut(s) 475
MflI RGATCY 1 cut(s) 970
MhlI GDGCHC 2 cut(s) 220, 889
MluCI AATT 7 cut(s) 109, 146, 402, 475, 617, 1066, 1492
MlyI GAGTC 1 cut(s) 605
MmeI TCCRAC 1 cut(s) 225
MnlI CCTC 7 cut(s) 37, 51, 679, 1017, 1187, 1372, 1612
Mph1103I ATGCAT 2 cut(s) 183, 847
MroI TCCGGA 1 cut(s) 824
MroXI GAANNNNTTC 1 cut(s) 1215
MseI TTAA 6 cut(s) 231, 243, 318, 750, 1139, 1295
MslI CAYNNNNRTG 3 cut(s) 186, 422, 1371
MspA1I CMGCKG 1 cut(s) 761
MspCI CTTAAG 2 cut(s) 230, 242
MspI CCGG 5 cut(s) 205, 340, 825, 1038, 1481
MspR9I CCNGG 3 cut(s) 206, 1464, 1481
MunI CAATTG 1 cut(s) 475
MvaI CCWGG 1 cut(s) 1464
MwoI GCNNNNNNNGC 5 cut(s) 440, 502, 668, 1259, 1514
NciI CCSGG 2 cut(s) 206, 1481
NdeI CATATG 1 cut(s) 94
NdeII GATC 8 cut(s) 591, 652, 714, 834, 928, 970, 1546, 1690
NlaIV GGNNCC 3 cut(s) 62, 1254, 1485
NmuCI GTSAC 2 cut(s) 539, 906
NsbI TGCGCA 1 cut(s) 511
NsiI ATGCAT 2 cut(s) 183, 847
NspI RCATGY 2 cut(s) 181, 224
NspV TTCGAA 1 cut(s) 487
PcsI WCGNNNNNNNCGW 1 cut(s) 1219
PdmI GAANNNNTTC 1 cut(s) 1215
PfeI GAWTC 3 cut(s) 32, 393, 730
PinAI ACCGGT 1 cut(s) 1037
PkrI GCNGC 5 cut(s) 70, 160, 1090, 1093, 1519
PleI GAGTC 1 cut(s) 605
PpsI GAGTC 1 cut(s) 605
PsiI TTATAA 1 cut(s) 1655
Psp6I CCWGG 1 cut(s) 1462
PspGI CCWGG 1 cut(s) 1462
PspN4I GGNNCC 3 cut(s) 62, 1254, 1485
PspPI GGNCC 2 cut(s) 1196, 1288
PsuI RGATCY 1 cut(s) 970
PvuII CAGCTG 1 cut(s) 761
RsaI GTAC 6 cut(s) 678, 742, 808, 904, 1317, 1532
RsaNI GTAC 6 cut(s) 677, 741, 807, 903, 1316, 1531
RseI CAYNNNNRTG 3 cut(s) 186, 422, 1371
SalI GTCGAC 1 cut(s) 1224
SaqAI TTAA 6 cut(s) 231, 243, 318, 750, 1139, 1295
SatI GCNGC 5 cut(s) 69, 159, 1089, 1092, 1518
Sau3AI GATC 8 cut(s) 591, 652, 714, 834, 928, 970, 1546, 1690
Sau96I GGNCC 2 cut(s) 1196, 1288
ScaI AGTACT 1 cut(s) 1317
SchI GAGTC 1 cut(s) 605
ScrFI CCNGG 3 cut(s) 206, 1464, 1481
SduI GDGCHC 2 cut(s) 220, 889
SfaNI GCATC 6 cut(s) 190, 577, 832, 1173, 1250, 1504
SfcI CTRYAG 1 cut(s) 603
SfuI TTCGAA 1 cut(s) 487
SinI GGWCC 1 cut(s) 1196
SmiMI CAYNNNNRTG 3 cut(s) 186, 422, 1371
SmlI CTYRAG 4 cut(s) 230, 242, 376, 1603
SmoI CTYRAG 4 cut(s) 230, 242, 376, 1603
SpeI ACTAGT 1 cut(s) 899
Sse9I AATT 7 cut(s) 109, 146, 402, 475, 617, 1066, 1492
SsiI CCGC 1 cut(s) 158
SspI AATATT 4 cut(s) 86, 451, 705, 1174
SspMI CTAG 4 cut(s) 74, 192, 804, 900
StyD4I CCNGG 3 cut(s) 204, 1462, 1479
StyI CCWWGG 1 cut(s) 974
TaaI ACNGT 2 cut(s) 545, 1433
TaiI ACGT 4 cut(s) 312, 700, 814, 908
TaqI TCGA 6 cut(s) 487, 717, 1209, 1225, 1537, 1662
TasI AATT 7 cut(s) 109, 146, 402, 475, 617, 1066, 1492
TatI WGTACW 3 cut(s) 676, 806, 1315
TauI GCSGC 1 cut(s) 161
TfiI GAWTC 3 cut(s) 32, 393, 730
Tru1I TTAA 6 cut(s) 231, 243, 318, 750, 1139, 1295
Tru9I TTAA 6 cut(s) 231, 243, 318, 750, 1139, 1295
TscAI CASTG 2 cut(s) 581, 1479
TseFI GTSAC 2 cut(s) 539, 906
TseI GCWGC 4 cut(s) 68, 1088, 1091, 1517
Tsp45I GTSAC 2 cut(s) 539, 906
TspDTI ATGAA 6 cut(s) 122, 315, 743, 1194, 1208, 1641
TspGWI ACGGA 1 cut(s) 26
TspRI CASTG 2 cut(s) 581, 1479
Vha464I CTTAAG 2 cut(s) 230, 242
VneI GTGCAC 1 cut(s) 216
VpaK11BI GGWCC 1 cut(s) 1196
XagI CCTNNNNNAGG 1 cut(s) 41
XbaI TCTAGA 1 cut(s) 73
XceI RCATGY 2 cut(s) 181, 224
XmiI GTMKAC 2 cut(s) 798, 1225
XmnI GAANNNNTTC 1 cut(s) 1215
XspI CTAG 4 cut(s) 74, 192, 804, 900
ZrmI AGTACT 1 cut(s) 1317
Zsp2I ATGCAT 2 cut(s) 183, 847
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.