Rw0G012910

protein FAR1-RELATED SEQUENCE

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00572
Physical Location & Seq
Forward (+)
35605 .. 39123
3519 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G012910.1

Sequence Viewer

Length: 2649 bp
ATGGAGCATGTGGCTGTATCAACAAGGGTTCCATCAATAAGTTATAGTGTAGAGAACGGAGGTACAAGGGATTACAGTAGTGAATTTAAAACGATTAAGATATTCAAGAGCAAAGAAGAATTGATAAAATGGGCTCGTGATGTTGGGAGATTGCATGGTTTTGTTATTGTCACATTGAGATCTGACAGTGGCAAAGGCAGTAAGAGACCTAGAGTTATATTGGGTTGTGAGAGGAGTGGAAAATGTGATAGCCGAAGTACATCCAAAAGAACAATGACGGACAAGTGCGTACGTCGACATACGGGAACTAAGAAGTGTGATTGTCCTTTCCGGTTAATGGGCAAGAAGCTAGCGGCTGGTGATGAGTGGGACCTGAGAGTAGTAGAAGGAATGCATAATCATGAAGCAGGGCACAGTGGGATGGGCCATTCATTTCAAGGTAGATTATCTCAAGAGGAGAAGTCATTGTTGAAGGATATGTGTAAAACAGGGGAGCAGCCTAAGGAGATATTAAGAACACTAAAAGAGAGGGACGAACACAACAAATCCACAGGTAGGACAATATACAATGAATATCAAAGTTTGAAGCGTATACAGAAACTTGAGGATGAAAGTTCTCAATTGCAACAATTAATGAGTAACGCAGAGGATTACAATTTCATCGAGAAGCACAGGAATACTAGTCCAAAGATTGACACAGTCATGGACTTGTTTTTGACACACCCAACTAGCTTGGAATTGCTACTTGCATTTCCAGCTGTTTTGATAATAGAGTCCATATATCAGAAGGATTGGATGTGGGCGACGTTAGAGATTTGGGGAGTTACGTCAACTAATAGGATATTTTTTGTTGCTTTAGGTATCCTTTCTTCAAAACGGAAAAGTAATTGTGAATGGGCCTTAAATTCATTGAGAGGTGTAATGGATGATAATGGTATTGCTATGCCTGATATTGTAATTTTACAAGCATCCAAAGAAGACAAGATTTACGTGGCCGCAATGAAAGCCATTAACGACGCCTTCAGTACGGCTAAACTTTTGTTATCTTGGTATTCCACCTGTGATAATGTGGTAGCATATTGCCGGAATATATCAGAGTTGAATGTTGTGGAGCAGCGTTCCTTTAAAAAGAAGTGGATGTTATTGGTAGCATCCTCCACTGAAGCCGATTTCGAACAACATTTAATGCAGCTACGCACCGAATTTTTTATTTACCCAGAGGTACTTGAATATGCAGACACTTTGTTGAAGCCATATAAGGAAATGTTTGTTTCAGCGTGGACAGATGGAGTTATGCACTTTGGGAATACAGCACTGTTGATCGGGGATCCAACATCCTTCCATTATATGTCAGATTATTTATCCCAATGTGAAGGTTCTGCAGTGGTAGAGCAAAAAGCAATCGACGCATTTTGGGAGCGTATGCATGGCATGATTGAGGAAGACCAAGCGGAGGTTAAAGCTTCGTTTGTGAAATCCTTAACAAATGAGTGCAATGATAAAGATGGGCGCTCAGAGTTGAAGGAACTTCATGGCTTTATTTCCATTTATGCATTAGATATGATCTATGAGCAGTCGACCTTGCTTGAGATAGATGATGGCCATAGTGAGTACTGTAGTTGTGCCATAAAACGTACCCATGGCTTACCATGTGCACATGAAATTGCAAAGTACAAGAAAGAGGGTCGACCTATTCCACTTGAATGCATCAATTCTCATTGGAGGAAACTTCACTTGGAACCTTTAAGAAAGACCGGATCAGAGACCAATATGGATGAGAGGATGAAACGACGTAGGCTAAGTGAGGAGATGAATGCAGATACTCATTCTGCTCTACCCTTGCTCGAGATTGTGGAATCTGAACCTAATTTACCGAATGCTGGTCCGTCTATAGTGCCCTCAAAACAGGAGAAGCAGCCAGAGGATAAGGTGTATGGTATGCAGACAACTAAGCAACTTGAGTTCATAGATGTATGTCCACTTGTATTGAGGCCATATATCCTTGATGTAAAGGATGTTGCAAGAGATGGCCATTGCGGTTTTAGAGCTATAGCATCATTTATGGGTTACGGTGAAGAGGTCGGATGGGTGAAAGTGCGGGAGGACTTAACAAATGAGCTTATGATCAACGCAGCTCCCTATGCCCAACTCTTTGGTTCGGATCAAAGGGTTAATGAGCTATTTGATGCATTGACATATTTTGAGAGCATGTGTTTACAGAAGAAATATTGGATGACTATGCCTGACATGGGTCATATTATAGCATCTTGCTATAATGTTGTACTCATGCATTTGTCTTCAGTTCAGTGCTTTACATTCTTTCCACTTAGAACTGCACCCACATCATTCTCAATACCATCAACTAGAGAGATTGTTATTGGATTTGTCGAAGAACATTTTGTTCAGGTATATTTGAAAACAGGACATCCAATGCCTCCTCCAACTCCAGCGCCCACCAGAAAGAATCCTCATGTAGCAACAAACTGGGAAAGATTTCATGAACAACGTTCCACAGAATGGGCAACTCTATACCTCGGTCGCATAGAGCATTTCAAATCCTTACAGCCCGAGGTCGTCTCACGAAAGAACCCAGTTGTGCTTGATATTGATTCTTTGCCTTCTGAAGACAATGTGGATTTACTATTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

882

Amino Acids

100.87

Weight (kDa)

6.12

Isoelectric Point (pI)

46.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000143)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G76710 AT1G76710 AT1G76710 AT1G76710
fragaria_vesca FvH4_1g20063 FvH4_2g15231 FvH4_3g04011 FvH4_3g28681 FvH4_4g01411 FvH4_4g10181 FvH4_4g15922 FvH4_4g16651 FvH4_4g16652 FvH4_5g13892 FvH4_5g13893 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g25511 FvH4_6g12551 FvH4_6g12552 FvH4_6g38841 FvH4_7g04391
malus_domestica MD05G1031300.v1.1 MD05G1031400.v1.1 MD05G1031500.v1.1 MD08G1164400.v1.1 MD10G1032900.v1.1 MD10G1033000.v1.1 MD10G1033100.v1.1
prunus_persica Prupe.3G240700_v2.0.a1 Prupe.7G144600_v2.0.a1 Prupe.8G038500_v2.0.a1 Prupe.8G038500_v2.0.a1
pyrus_communis pycom05g02250 pycom05g02260 pycom05g02270 pycom05g02280 pycom08g14160 pycom10g02100 pycom10g02110 pycom10g02130
rosa_chinensis RchiOBHm_Chr1g0329481 RchiOBHm_Chr1g0329491 RchiOBHm_Chr1g0341531 RchiOBHm_Chr3g0464811 RchiOBHm_Chr3g0494701 RchiOBHm_Chr3g0497501 RchiOBHm_Chr4g0385841 RchiOBHm_Chr5g0061181 RchiOBHm_Chr6g0263001 RchiOBHm_Chr7g0193111 RchiOBHm_Chr7g0206281 RchiOBHm_Chr7g0206311
rosa_laevigata RLG00000018908 RLG00000028528 RLG00000028803 RLG00000029882 RLG00000029883 RLG00000030361
rosa_multiflora Rmu_co8196328.1_g000001 Rmu_co8259135.1_g000001 Rmu_co8269185.1_g000001 Rmu_sc0000076.1_g000019 Rmu_sc0000311.1_g000007 Rmu_sc0000429.1_g000038 Rmu_sc0000429.1_g000039 Rmu_sc0000429.1_g000040 Rmu_sc0000511.1_g000005 Rmu_sc0000539.1_g000054 Rmu_sc0000566.1_g000039 Rmu_sc0000805.1_g000032 Rmu_sc0000870.1_g000073 Rmu_sc0000870.1_g000074 Rmu_sc0001010.1_g000018 Rmu_sc0001083.1_g000013 Rmu_sc0001114.1_g000011 Rmu_sc0001702.1_g000027 Rmu_sc0001779.1_g000012 Rmu_sc0002923.1_g000036 Rmu_sc0003242.1_g000011 Rmu_sc0003291.1_g000036 Rmu_sc0003393.1_g000012 Rmu_sc0003872.1_g000016 Rmu_sc0003872.1_g000017 Rmu_sc0003872.1_g000018 Rmu_sc0004084.1_g000020 Rmu_sc0004386.1_g000005 Rmu_sc0004622.1_g000005 Rmu_sc0004742.1_g000021 Rmu_sc0004755.1_g000020 Rmu_sc0004805.1_g000036 Rmu_sc0005065.1_g000006 Rmu_sc0005177.1_g000004 Rmu_sc0006373.1_g000003 Rmu_sc0006373.1_g000004 Rmu_sc0007121.1_g000002 Rmu_sc0007943.1_g000003 Rmu_sc0010368.1_g000006 Rmu_sc0010543.1_g000001 Rmu_sc0012591.1_g000006 Rmu_sc0013504.1_g000009 Rmu_sc0015025.1_g000001 Rmu_sc0016170.1_g000001 Rmu_sc0017156.1_g000001 Rmu_sc0026439.1_g000001
rosa_roxburghii Rroxscaffold_175G00432280 Rroxscaffold_1G00030190 Rroxscaffold_1G00030880 Rroxscaffold_2G00090520 Rroxscaffold_3G00227940 Rroxscaffold_3G00233400 Rroxscaffold_3G00238500 Rroxscaffold_3G00251650 Rroxscaffold_4G00301570 Rroxscaffold_4G00321040 Rroxscaffold_5G00350880 Rroxscaffold_7G00184400
rosa_rugosa Rorug01G0080800 Rorug01G0080900 Rorug01G0193900 Rorug02G0275900 Rorug02G0275900 Rorug02G0275900 Rorug02G0305400 Rorug02G0311800 Rorug02G0350400 Rorug02G0381300 Rorug03G0136700 Rorug03G0181900 Rorug03G0268000 Rorug04G0301600 Rorug05G0175100 Rorug05G0250700 Rorug05G0298200 Rorug05G0596000 Rorug06G0029500 Rorug07G0094300 Rorug07G0094300 Rorug07G0095400 Rorug07G0140100
rosa_samantha Rh1AG099200 Rh1AG190500 Rh1BG078900 Rh1BG079000 Rh1BG079100 Rh1CG084600 Rh1CG084700 Rh1CG095300 Rh1CG175900 Rh1DG103300 Rh1DG150400 Rh2AG079300 Rh2AG272400 Rh2AG464800 Rh2AG507400 Rh2DG078300 Rh2DG078400 Rh3CG206900 Rh3CG295400 Rh3DG206800 Rh3DG356200 Rh4CG071500 Rh4CG179200 Rh4DG064700 Rh5CG362400 Rh7AG212300 Rh7AG226200 Rh7BG222200
rosa_wichuraiana Rw0G009990 Rw0G011260 Rw0G011270 Rw0G012910 Rw0G013740 Rw1G007740 Rw1G013050 Rw1G014230 Rw2G014270 Rw3G012720 Rw3G028110 Rw4G006630 Rw4G015270 Rw4G016160 Rw4G031380 Rw5G011440 Rw5G029180 Rw5G048360 Rw5G048430 Rw5G048780 Rw6G005250 Rw6G006390 Rw7G002840 Rw7G014080 Rw7G019650 Rw7G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 2517
AccI GTMKAC 4 cut(s) 295, 592, 1577, 1687
AciI CCGC 5 cut(s) 353, 996, 1451, 2037, 2098
AclI AACGTT 1 cut(s) 2506
AclWI GGATC 4 cut(s) 1322, 1335, 1765, 2169
AcoI YGGCCR 3 cut(s) 993, 1600, 2029
AcsI RAATTY 3 cut(s) 83, 904, 1202
AcuI CTGAAG 4 cut(s) 1006, 1182, 2283, 2643
AcyI GRCGYC 1 cut(s) 1017
AfaI GTAC 9 cut(s) 64, 259, 291, 1027, 1224, 1613, 1636, 1673, 2283
AfiI CCNNNNNNNGG 6 cut(s) 337, 555, 1453, 1880, 2249, 2517
AhlI ACTAGT 1 cut(s) 680
AjuI GAANNNNNNNTTGG 2 cut(s) 1718, 1750
AluBI AGCT 9 cut(s) 349, 732, 758, 1192, 1463, 2048, 2119, 2135, 2179
AluI AGCT 9 cut(s) 349, 732, 758, 1192, 1463, 2048, 2119, 2135, 2179
Alw21I GWGCWC 1 cut(s) 1657
Alw26I GTCTC 3 cut(s) 199, 1757, 2581
Alw44I GTGCAC 1 cut(s) 1653
AlwI GGATC 4 cut(s) 1322, 1335, 1765, 2169
Ama87I CYCGRG 2 cut(s) 1844, 2567
AoxI GGCC 6 cut(s) 424, 897, 993, 1600, 1991, 2029
ApaLI GTGCAC 1 cut(s) 1653
ApeKI GCWGC 5 cut(s) 496, 1114, 1189, 1915, 2132
ApoI RAATTY 3 cut(s) 83, 904, 1202
AseI ATTAAT 1 cut(s) 632
Asp700I GAANNNNTTC 1 cut(s) 2493
AspLEI GCGC 2 cut(s) 1512, 2452
AspS9I GGNCC 4 cut(s) 370, 424, 897, 1883
AsuHPI GGTGA 3 cut(s) 371, 2084, 2101
AsuII TTCGAA 1 cut(s) 1173
AsuNHI GCTAGC 1 cut(s) 349
AvaI CYCGRG 2 cut(s) 1844, 2567
AvaII GGWCC 2 cut(s) 370, 1883
AxyI CCTNAGG 1 cut(s) 501
BaeGI GKGCMC 3 cut(s) 414, 1657, 1899
BalI TGGCCA 2 cut(s) 1602, 2031
BamHI GGATCC 1 cut(s) 1327
BanII GRGCYC 1 cut(s) 136
BarI GAAGNNNNNNTAC 2 cut(s) 853, 885
BauI CACGAG 1 cut(s) 135
BbsI GAAGAC 4 cut(s) 984, 1449, 2289, 2631
Bbv12I GWGCWC 1 cut(s) 1657
BbvI GCAGC 5 cut(s) 508, 1126, 1201, 1927, 2144
BccI CCATC 8 cut(s) 40, 415, 1280, 1499, 1592, 2021, 2079, 2365
BceAI ACGGC 1 cut(s) 1044
BciVI GTATCC 1 cut(s) 872
BclI TGATCA 1 cut(s) 2124
BcoDI GTCTC 3 cut(s) 199, 1757, 2581
BcuI ACTAGT 1 cut(s) 680
BfaI CTAG 5 cut(s) 210, 350, 681, 729, 2364
BfmI CTRYAG 4 cut(s) 1380, 1615, 1890, 2049
BfoI RGCGCY 2 cut(s) 1513, 2453
BfuI GTATCC 1 cut(s) 872
BglII AGATCT 1 cut(s) 179
BisI GCNGC 7 cut(s) 354, 497, 996, 1115, 1190, 1916, 2133
BlsI GCNGC 7 cut(s) 355, 498, 997, 1116, 1191, 1917, 2134
BmcAI AGTACT 1 cut(s) 1613
Bme18I GGWCC 2 cut(s) 370, 1883
BmeT110I CYCGRG 2 cut(s) 1844, 2567
BmgT120I GGNCC 4 cut(s) 370, 424, 897, 1883
BmiI GGNNCC 4 cut(s) 30, 371, 1329, 1740
BmrI ACTGGG 2 cut(s) 2494, 2585
BmsI GCATC 6 cut(s) 977, 1160, 1716, 2063, 2176, 2273
BmtI GCTAGC 1 cut(s) 353
BmuI ACTGGG 2 cut(s) 2494, 2585
BoxI GACNNNNGTC 1 cut(s) 2250
BpiI GAAGAC 4 cut(s) 984, 1449, 2289, 2631
BplI GAGNNNNNCTC 2 cut(s) 2561, 2593
BpmI CTGGAG 1 cut(s) 2430
Bpu14I TTCGAA 1 cut(s) 1173
BpuEI CTTGAG 4 cut(s) 435, 623, 1607, 1979
BsaAI YACGTR 1 cut(s) 991
BsaHI GRCGYC 1 cut(s) 1017
BsaI GGTCTC 2 cut(s) 199, 1757
BsaJI CCNNGG 3 cut(s) 1639, 2533, 2568
BsaWI WCCGGW 2 cut(s) 330, 1754
Bsc4I CCNNNNNNNGG 6 cut(s) 337, 555, 1453, 1880, 2249, 2517
Bse1I ACTGG 2 cut(s) 2489, 2591
Bse21I CCTNAGG 1 cut(s) 501
Bse3DI GCAATG 3 cut(s) 1005, 1501, 2032
BseDI CCNNGG 3 cut(s) 1639, 2533, 2568
BseLI CCNNNNNNNGG 6 cut(s) 337, 555, 1453, 1880, 2249, 2517
BseMI GCAATG 3 cut(s) 1005, 1501, 2032
BseMII CTCAG 2 cut(s) 365, 1527
BseNI ACTGG 2 cut(s) 2489, 2591
BseRI GAGGAG 4 cut(s) 247, 470, 1820, 2427
BseSI GKGCMC 3 cut(s) 414, 1657, 1899
BseXI GCAGC 5 cut(s) 508, 1126, 1201, 1927, 2144
BsgI GTGCAG 1 cut(s) 2319
Bsh1285I CGRYCG 1 cut(s) 2539
BshFI GGCC 6 cut(s) 426, 899, 995, 1602, 1993, 2031
BsiEI CGRYCG 1 cut(s) 2539
BsiHKAI GWGCWC 1 cut(s) 1657
BsiHKCI CYCGRG 2 cut(s) 1844, 2567
BsiSI CCGG 3 cut(s) 331, 1084, 1755
BsiWI CGTACG 1 cut(s) 289
BslFI GGGAC 2 cut(s) 383, 545
BslI CCNNNNNNNGG 6 cut(s) 337, 555, 1453, 1880, 2249, 2517
BsmAI GTCTC 3 cut(s) 199, 1757, 2581
BsmBI CGTCTC 1 cut(s) 2581
BsmFI GGGAC 2 cut(s) 383, 545
BsmI GAATGC 4 cut(s) 396, 1709, 1819, 1882
BsnI GGCC 6 cut(s) 426, 899, 995, 1602, 1993, 2031
Bso31I GGTCTC 2 cut(s) 199, 1757
BsoBI CYCGRG 2 cut(s) 1844, 2567
Bsp119I TTCGAA 1 cut(s) 1173
Bsp1286I GDGCHC 4 cut(s) 136, 414, 1657, 1899
Bsp143I GATC 7 cut(s) 179, 1320, 1327, 1563, 1757, 2124, 2161
Bsp19I CCATGG 1 cut(s) 1639
BspACI CCGC 5 cut(s) 353, 996, 1451, 2037, 2098
BspANI GGCC 6 cut(s) 426, 899, 995, 1602, 1993, 2031
BspCNI CTCAG 2 cut(s) 366, 1526
BspHI TCATGA 2 cut(s) 400, 2497
BspLI GGNNCC 4 cut(s) 30, 371, 1329, 1740
BspMAI CTGCAG 1 cut(s) 1384
BspOI GCTAGC 1 cut(s) 353
BspPI GGATC 4 cut(s) 1322, 1335, 1765, 2169
BspT104I TTCGAA 1 cut(s) 1173
BspTNI GGTCTC 2 cut(s) 199, 1757
BsrDI GCAATG 3 cut(s) 1005, 1501, 2032
BsrI ACTGG 2 cut(s) 2489, 2591
BssECI CCNNGG 3 cut(s) 1639, 2533, 2568
BssMI GATC 7 cut(s) 179, 1320, 1327, 1563, 1757, 2124, 2161
BssNAI GTATAC 1 cut(s) 593
BssNI GRCGYC 1 cut(s) 1017
BssSI CACGAG 1 cut(s) 135
BssT1I CCWWGG 1 cut(s) 1639
Bst1107I GTATAC 1 cut(s) 593
Bst2BI CACGAG 1 cut(s) 135
Bst4CI ACNGT 7 cut(s) 77, 188, 416, 700, 1317, 1616, 2072
Bst6I CTCTTC 1 cut(s) 2070
BstACI GRCGYC 1 cut(s) 1017
BstBAI YACGTR 1 cut(s) 991
BstBI TTCGAA 1 cut(s) 1173
BstC8I GCNNGC 1 cut(s) 351
BstDEI CTNAG 7 cut(s) 309, 374, 501, 1513, 1799, 1950, 2327
BstDSI CCRYGG 1 cut(s) 1639
BstH2I RGCGCY 2 cut(s) 1513, 2453
BstHHI GCGC 2 cut(s) 1512, 2452
BstKTI GATC 7 cut(s) 182, 1323, 1330, 1566, 1760, 2127, 2164
BstMAI GTCTC 3 cut(s) 199, 1757, 2581
BstMBI GATC 7 cut(s) 179, 1320, 1327, 1563, 1757, 2124, 2161
BstMCI CGRYCG 1 cut(s) 2539
BstMWI GCNNNNNNNGC 4 cut(s) 755, 1004, 1406, 2141
BstNSI RCATGY 2 cut(s) 11, 2212
BstPAI GACNNNNGTC 1 cut(s) 2250
BstSFI CTRYAG 4 cut(s) 1380, 1615, 1890, 2049
BstSLI GKGCMC 3 cut(s) 414, 1657, 1899
BstV1I GCAGC 5 cut(s) 508, 1126, 1201, 1927, 2144
BstV2I GAAGAC 4 cut(s) 984, 1449, 2289, 2631
BstX2I RGATCY 2 cut(s) 179, 1327
BstXI CCANNNNNNTGG 1 cut(s) 2153
BstYI RGATCY 2 cut(s) 179, 1327
BstZ17I GTATAC 1 cut(s) 593
Bsu36I CCTNAGG 1 cut(s) 501
BsuI GTATCC 1 cut(s) 872
BsuRI GGCC 6 cut(s) 426, 899, 995, 1602, 1993, 2031
BtgI CCRYGG 1 cut(s) 1639
BtsI GCAGTG 1 cut(s) 1389
BtsIMutI CAGTG 6 cut(s) 193, 421, 1158, 1313, 1389, 2312
Cac8I GCNNGC 1 cut(s) 351
CciI TCATGA 2 cut(s) 400, 2497
CfoI GCGC 2 cut(s) 1512, 2452
Cfr13I GGNCC 4 cut(s) 370, 424, 897, 1883
CseI GACGC 2 cut(s) 1025, 1415
Csp6I GTAC 9 cut(s) 63, 258, 290, 1026, 1223, 1612, 1635, 1672, 2282
CspCI CAANNNNNGTGG 2 cut(s) 1968, 2003
CviQI GTAC 9 cut(s) 63, 258, 290, 1026, 1223, 1612, 1635, 1672, 2282
DdeI CTNAG 7 cut(s) 309, 374, 501, 1513, 1799, 1950, 2327
DpnI GATC 7 cut(s) 181, 1322, 1329, 1565, 1759, 2126, 2163
DpnII GATC 7 cut(s) 179, 1320, 1327, 1563, 1757, 2124, 2161
DraI TTTAAA 2 cut(s) 88, 1126
EaeI YGGCCR 3 cut(s) 993, 1600, 2029
Eam1104I CTCTTC 1 cut(s) 2070
EarI CTCTTC 1 cut(s) 2070
Eco130I CCWWGG 1 cut(s) 1639
Eco24I GRGCYC 1 cut(s) 136
Eco31I GGTCTC 2 cut(s) 199, 1757
Eco47I GGWCC 2 cut(s) 370, 1883
Eco57I CTGAAG 4 cut(s) 1006, 1182, 2283, 2643
Eco81I CCTNAGG 1 cut(s) 501
Eco88I CYCGRG 2 cut(s) 1844, 2567
EcoO109I RGGNCCY 1 cut(s) 370
EcoT14I CCWWGG 1 cut(s) 1639
EcoT22I ATGCAT 6 cut(s) 396, 1428, 1555, 1709, 2191, 2292
EcoT38I GRGCYC 1 cut(s) 136
ErhI CCWWGG 1 cut(s) 1639
Esp3I CGTCTC 1 cut(s) 2581
FaqI GGGAC 2 cut(s) 383, 545
FauI CCCGC 1 cut(s) 2091
FbaI TGATCA 1 cut(s) 2124
FblI GTMKAC 4 cut(s) 295, 592, 1577, 1687
Fnu4HI GCNGC 7 cut(s) 354, 497, 996, 1115, 1190, 1916, 2133
FriOI GRGCYC 1 cut(s) 136
Fsp4HI GCNGC 7 cut(s) 354, 497, 996, 1115, 1190, 1916, 2133
FspBI CTAG 5 cut(s) 210, 350, 681, 729, 2364
GlaI GCGC 2 cut(s) 1511, 2451
GluI GCNGC 7 cut(s) 354, 497, 996, 1115, 1190, 1916, 2133
GsuI CTGGAG 1 cut(s) 2430
HaeII RGCGCY 2 cut(s) 1513, 2453
HaeIII GGCC 6 cut(s) 426, 899, 995, 1602, 1993, 2031
HapII CCGG 3 cut(s) 331, 1084, 1755
HgaI GACGC 2 cut(s) 1025, 1415
HhaI GCGC 2 cut(s) 1512, 2452
Hin1I GRCGYC 1 cut(s) 1017
Hin6I GCGC 2 cut(s) 1510, 2450
HinP1I GCGC 2 cut(s) 1510, 2450
HincII GTYRAC 4 cut(s) 296, 831, 1578, 1688
HindII GTYRAC 4 cut(s) 296, 831, 1578, 1688
HindIII AAGCTT 1 cut(s) 1461
HinfI GANTC 4 cut(s) 773, 1856, 2464, 2609
HpaII CCGG 3 cut(s) 331, 1084, 1755
HphI GGTGA 3 cut(s) 371, 2084, 2101
Hpy166II GTNNAC 9 cut(s) 296, 593, 831, 1281, 1578, 1655, 1688, 1979, 2216
Hpy188III TCNNGA 8 cut(s) 106, 137, 401, 452, 664, 1846, 2498, 2580
Hpy8I GTNNAC 9 cut(s) 296, 593, 831, 1281, 1578, 1655, 1688, 1979, 2216
Hpy99I CGWCG 5 cut(s) 297, 808, 1019, 1409, 1794
HpyAV CCTTC 8 cut(s) 380, 466, 781, 1030, 1348, 1367, 1516, 2628
HpyCH4III ACNGT 7 cut(s) 77, 188, 416, 700, 1317, 1616, 2072
HpyCH4IV ACGT 7 cut(s) 292, 806, 827, 990, 1633, 1792, 2506
HpyF10VI GCNNNNNNNGC 4 cut(s) 755, 1004, 1406, 2141
HpyF3I CTNAG 7 cut(s) 309, 374, 501, 1513, 1799, 1950, 2327
HpySE526I ACGT 7 cut(s) 292, 806, 827, 990, 1633, 1792, 2506
Hsp92I GRCGYC 1 cut(s) 1017
HspAI GCGC 2 cut(s) 1510, 2450
Ksp22I TGATCA 1 cut(s) 2124
Kzo9I GATC 7 cut(s) 179, 1320, 1327, 1563, 1757, 2124, 2161
LmnI GCTCC 5 cut(s) 4, 493, 1111, 1417, 2140
Lsp1109I GCAGC 5 cut(s) 508, 1126, 1201, 1927, 2144
LweI GCATC 6 cut(s) 977, 1160, 1716, 2063, 2176, 2273
MaeI CTAG 5 cut(s) 210, 350, 681, 729, 2364
MaeII ACGT 7 cut(s) 292, 806, 827, 990, 1633, 1792, 2506
MaeIII GTNAC 4 cut(s) 169, 638, 823, 2066
MalI GATC 7 cut(s) 181, 1322, 1329, 1565, 1759, 2126, 2163
MboI GATC 7 cut(s) 179, 1320, 1327, 1563, 1757, 2124, 2161
MboII GAAGA 9 cut(s) 128, 861, 989, 1454, 2087, 2233, 2289, 2402, 2636
MfeI CAATTG 1 cut(s) 620
MflI RGATCY 2 cut(s) 179, 1327
MhlI GDGCHC 4 cut(s) 136, 414, 1657, 1899
MlsI TGGCCA 2 cut(s) 1602, 2031
MluNI TGGCCA 2 cut(s) 1602, 2031
MlyI GAGTC 1 cut(s) 782
MmeI TCCRAC 3 cut(s) 1355, 2062, 2465
Mox20I TGGCCA 2 cut(s) 1602, 2031
Mph1103I ATGCAT 6 cut(s) 396, 1428, 1555, 1709, 2191, 2292
MroXI GAANNNNTTC 1 cut(s) 2493
MscI TGGCCA 2 cut(s) 1602, 2031
MslI CAYNNNNRTG 3 cut(s) 399, 701, 1702
Msp20I TGGCCA 2 cut(s) 1602, 2031
MspA1I CMGCKG 1 cut(s) 758
MspI CCGG 3 cut(s) 331, 1084, 1755
MunI CAATTG 1 cut(s) 620
Mva1269I GAATGC 4 cut(s) 396, 1709, 1819, 1882
MwoI GCNNNNNNNGC 4 cut(s) 755, 1004, 1406, 2141
NcoI CCATGG 1 cut(s) 1639
NdeII GATC 7 cut(s) 179, 1320, 1327, 1563, 1757, 2124, 2161
NheI GCTAGC 1 cut(s) 349
NlaIV GGNNCC 4 cut(s) 30, 371, 1329, 1740
NmuCI GTSAC 1 cut(s) 169
NsiI ATGCAT 6 cut(s) 396, 1428, 1555, 1709, 2191, 2292
NspI RCATGY 2 cut(s) 11, 2212
NspV TTCGAA 1 cut(s) 1173
PaeR7I CTCGAG 1 cut(s) 1844
PagI TCATGA 2 cut(s) 400, 2497
PctI GAATGC 4 cut(s) 396, 1709, 1819, 1882
PdmI GAANNNNTTC 1 cut(s) 2493
PfeI GAWTC 3 cut(s) 1856, 2464, 2609
Pfl23II CGTACG 1 cut(s) 289
PflFI GACNNNGTC 1 cut(s) 698
PflMI CCANNNNNTGG 1 cut(s) 2517
PkrI GCNGC 7 cut(s) 355, 498, 997, 1116, 1191, 1917, 2134
PleI GAGTC 1 cut(s) 781
PpsI GAGTC 1 cut(s) 781
Ppu21I YACGTR 1 cut(s) 991
PpuMI RGGWCCY 1 cut(s) 370
PshAI GACNNNNGTC 1 cut(s) 2250
PshBI ATTAAT 1 cut(s) 632
Psp1406I AACGTT 1 cut(s) 2506
Psp5II RGGWCCY 1 cut(s) 370
PspLI CGTACG 1 cut(s) 289
PspN4I GGNNCC 4 cut(s) 30, 371, 1329, 1740
PspPI GGNCC 4 cut(s) 370, 424, 897, 1883
PspPPI RGGWCCY 1 cut(s) 370
PsrI GAACNNNNNNTAC 2 cut(s) 1854, 1886
PstI CTGCAG 1 cut(s) 1384
PsuI RGATCY 2 cut(s) 179, 1327
PsyI GACNNNGTC 1 cut(s) 698
PvuII CAGCTG 1 cut(s) 758
RsaI GTAC 9 cut(s) 64, 259, 291, 1027, 1224, 1613, 1636, 1673, 2283
RsaNI GTAC 9 cut(s) 63, 258, 290, 1026, 1223, 1612, 1635, 1672, 2282
RseI CAYNNNNRTG 3 cut(s) 399, 701, 1702
SalI GTCGAC 3 cut(s) 294, 1576, 1686
SatI GCNGC 7 cut(s) 354, 497, 996, 1115, 1190, 1916, 2133
Sau3AI GATC 7 cut(s) 179, 1320, 1327, 1563, 1757, 2124, 2161
Sau96I GGNCC 4 cut(s) 370, 424, 897, 1883
ScaI AGTACT 1 cut(s) 1613
SchI GAGTC 1 cut(s) 782
SduI GDGCHC 4 cut(s) 136, 414, 1657, 1899
SfaNI GCATC 6 cut(s) 977, 1160, 1716, 2063, 2176, 2273
SfcI CTRYAG 4 cut(s) 1380, 1615, 1890, 2049
Sfr274I CTCGAG 1 cut(s) 1844
SfuI TTCGAA 1 cut(s) 1173
SinI GGWCC 2 cut(s) 370, 1883
SlaI CTCGAG 1 cut(s) 1844
SmiMI CAYNNNNRTG 3 cut(s) 399, 701, 1702
SmlI CTYRAG 5 cut(s) 450, 602, 1586, 1844, 1958
SmoI CTYRAG 5 cut(s) 450, 602, 1586, 1844, 1958
SpeI ACTAGT 1 cut(s) 680
SsiI CCGC 5 cut(s) 353, 996, 1451, 2037, 2098
SspI AATATT 1 cut(s) 2228
SspMI CTAG 5 cut(s) 210, 350, 681, 729, 2364
StyI CCWWGG 1 cut(s) 1639
TaaI ACNGT 7 cut(s) 77, 188, 416, 700, 1317, 1616, 2072
TaiI ACGT 7 cut(s) 295, 809, 830, 993, 1636, 1795, 2509
TaqI TCGA 8 cut(s) 295, 663, 1173, 1404, 1577, 1687, 1845, 2388
TaqII GACCGA 1 cut(s) 2525
TatI WGTACW 4 cut(s) 257, 1611, 1671, 2281
TauI GCSGC 2 cut(s) 356, 998
TfiI GAWTC 3 cut(s) 1856, 2464, 2609
TscAI CASTG 6 cut(s) 193, 421, 1165, 1320, 1389, 2312
TseFI GTSAC 1 cut(s) 169
TseI GCWGC 5 cut(s) 496, 1114, 1189, 1915, 2132
Tsp45I GTSAC 1 cut(s) 169
TspGWI ACGGA 4 cut(s) 72, 293, 892, 1875
TspRI CASTG 6 cut(s) 193, 421, 1165, 1320, 1389, 2312
Tth111I GACNNNGTC 1 cut(s) 698
Van91I CCANNNNNTGG 1 cut(s) 2517
VneI GTGCAC 1 cut(s) 1653
VpaK11BI GGWCC 2 cut(s) 370, 1883
VspI ATTAAT 1 cut(s) 632
XapI RAATTY 3 cut(s) 83, 904, 1202
XceI RCATGY 2 cut(s) 11, 2212
XhoI CTCGAG 1 cut(s) 1844
XmiI GTMKAC 4 cut(s) 295, 592, 1577, 1687
XmnI GAANNNNTTC 1 cut(s) 2493
XspI CTAG 5 cut(s) 210, 350, 681, 729, 2364
ZrmI AGTACT 1 cut(s) 1613
Zsp2I ATGCAT 6 cut(s) 396, 1428, 1555, 1709, 2191, 2292
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.