pycom10g02130

Histone-lysine N-methyltransferase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Forward (+)
2251826 .. 2253052
1227 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g02130.1

Sequence Viewer

Length: 747 bp
ATGGTGGGACTGGTTATCTTGCTAAATTTCAGAACTATTCTAACACAAGACTTAGAGGATGAGCCTTTGTCTAGGCTCTTCAAGGCTGTGAACTCCTCAGAGTTTGATGTTGCCGAGACGATGGTGAATGTCAATGTGGATTCTGAACCTCAGTCTACTGCTCTTGTTGTGCAATCACTTGATTCTGTTCCAATGGAGGGTGTAGTTATGGAGTTAAAAACAGAAGTGAGCGAGGAGAGGAAACTTTATTCAGAAAACAATCAACTGGCTATTTCAAAAAAGAATGCGATGATATCTCGTATCCGCAGTAATACTGCAGGTCGGAATTATCACATTGGATCAGGGTCCATGTCAAACAAAAGATCAAAACAATATAATGGAAAGTTGAAACATGGTGCACAAAAGCAAGTTGACGCCAAGTGTGTTGCTGCGCTTCTAGCATCAAAGGAAGCACAAGAGGAAATTTTAAATTATGAGCGGATGAAAAACAACGCTGCCACTCATCTTGAATCTCTCTACAATGAGATACGACCTGCCATTGAAGAACATGAAAGGGACAGCCAAGACAGTGTAGCTACCAGTGTAGCTGAGAAGTGGATAGAAGCCTGCTGCTTGAAACTCAAGGCGGAGTTCGACCTTTATTCTTCCATTGTTAAAAGCATTGCCTGCACTCCGCGAAGGCCGTTTGGCCAAGCTGAACCTTCTGACGGCAACACCGAGAATGAGATTAAGTACTTGCAGAATTGA

Protein Analysis

249

Amino Acids

27.73

Weight (kDa)

5.43

Isoelectric Point (pI)

60.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000143)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G76710 AT1G76710 AT1G76710 AT1G76710
fragaria_vesca FvH4_1g20063 FvH4_2g15231 FvH4_3g04011 FvH4_3g28681 FvH4_4g01411 FvH4_4g10181 FvH4_4g15922 FvH4_4g16651 FvH4_4g16652 FvH4_5g13892 FvH4_5g13893 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g25511 FvH4_6g12551 FvH4_6g12552 FvH4_6g38841 FvH4_7g04391
malus_domestica MD05G1031300.v1.1 MD05G1031400.v1.1 MD05G1031500.v1.1 MD08G1164400.v1.1 MD10G1032900.v1.1 MD10G1033000.v1.1 MD10G1033100.v1.1
prunus_persica Prupe.3G240700_v2.0.a1 Prupe.7G144600_v2.0.a1 Prupe.8G038500_v2.0.a1 Prupe.8G038500_v2.0.a1
pyrus_communis pycom05g02250 pycom05g02260 pycom05g02270 pycom05g02280 pycom08g14160 pycom10g02100 pycom10g02110 pycom10g02130
rosa_chinensis RchiOBHm_Chr1g0329481 RchiOBHm_Chr1g0329491 RchiOBHm_Chr1g0341531 RchiOBHm_Chr3g0464811 RchiOBHm_Chr3g0494701 RchiOBHm_Chr3g0497501 RchiOBHm_Chr4g0385841 RchiOBHm_Chr5g0061181 RchiOBHm_Chr6g0263001 RchiOBHm_Chr7g0193111 RchiOBHm_Chr7g0206281 RchiOBHm_Chr7g0206311
rosa_laevigata RLG00000018908 RLG00000028528 RLG00000028803 RLG00000029882 RLG00000029883 RLG00000030361
rosa_multiflora Rmu_co8196328.1_g000001 Rmu_co8259135.1_g000001 Rmu_co8269185.1_g000001 Rmu_sc0000076.1_g000019 Rmu_sc0000311.1_g000007 Rmu_sc0000429.1_g000038 Rmu_sc0000429.1_g000039 Rmu_sc0000429.1_g000040 Rmu_sc0000511.1_g000005 Rmu_sc0000539.1_g000054 Rmu_sc0000566.1_g000039 Rmu_sc0000805.1_g000032 Rmu_sc0000870.1_g000073 Rmu_sc0000870.1_g000074 Rmu_sc0001010.1_g000018 Rmu_sc0001083.1_g000013 Rmu_sc0001114.1_g000011 Rmu_sc0001702.1_g000027 Rmu_sc0001779.1_g000012 Rmu_sc0002923.1_g000036 Rmu_sc0003242.1_g000011 Rmu_sc0003291.1_g000036 Rmu_sc0003393.1_g000012 Rmu_sc0003872.1_g000016 Rmu_sc0003872.1_g000017 Rmu_sc0003872.1_g000018 Rmu_sc0004084.1_g000020 Rmu_sc0004386.1_g000005 Rmu_sc0004622.1_g000005 Rmu_sc0004742.1_g000021 Rmu_sc0004755.1_g000020 Rmu_sc0004805.1_g000036 Rmu_sc0005065.1_g000006 Rmu_sc0005177.1_g000004 Rmu_sc0006373.1_g000003 Rmu_sc0006373.1_g000004 Rmu_sc0007121.1_g000002 Rmu_sc0007943.1_g000003 Rmu_sc0010368.1_g000006 Rmu_sc0010543.1_g000001 Rmu_sc0012591.1_g000006 Rmu_sc0013504.1_g000009 Rmu_sc0015025.1_g000001 Rmu_sc0016170.1_g000001 Rmu_sc0017156.1_g000001 Rmu_sc0026439.1_g000001
rosa_roxburghii Rroxscaffold_175G00432280 Rroxscaffold_1G00030190 Rroxscaffold_1G00030880 Rroxscaffold_2G00090520 Rroxscaffold_3G00227940 Rroxscaffold_3G00233400 Rroxscaffold_3G00238500 Rroxscaffold_3G00251650 Rroxscaffold_4G00301570 Rroxscaffold_4G00321040 Rroxscaffold_5G00350880 Rroxscaffold_7G00184400
rosa_rugosa Rorug01G0080800 Rorug01G0080900 Rorug01G0193900 Rorug02G0275900 Rorug02G0275900 Rorug02G0275900 Rorug02G0305400 Rorug02G0311800 Rorug02G0350400 Rorug02G0381300 Rorug03G0136700 Rorug03G0181900 Rorug03G0268000 Rorug04G0301600 Rorug05G0175100 Rorug05G0250700 Rorug05G0298200 Rorug05G0596000 Rorug06G0029500 Rorug07G0094300 Rorug07G0094300 Rorug07G0095400 Rorug07G0140100
rosa_samantha Rh1AG099200 Rh1AG190500 Rh1BG078900 Rh1BG079000 Rh1BG079100 Rh1CG084600 Rh1CG084700 Rh1CG095300 Rh1CG175900 Rh1DG103300 Rh1DG150400 Rh2AG079300 Rh2AG272400 Rh2AG464800 Rh2AG507400 Rh2DG078300 Rh2DG078400 Rh3CG206900 Rh3CG295400 Rh3DG206800 Rh3DG356200 Rh4CG071500 Rh4CG179200 Rh4DG064700 Rh5CG362400 Rh7AG212300 Rh7AG226200 Rh7BG222200
rosa_wichuraiana Rw0G009990 Rw0G011260 Rw0G011270 Rw0G012910 Rw0G013740 Rw1G007740 Rw1G013050 Rw1G014230 Rw2G014270 Rw3G012720 Rw3G028110 Rw4G006630 Rw4G015270 Rw4G016160 Rw4G031380 Rw5G011440 Rw5G029180 Rw5G048360 Rw5G048430 Rw5G048780 Rw6G005250 Rw6G006390 Rw7G002840 Rw7G014080 Rw7G019650 Rw7G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 308, 541
AccBSI CCGCTC 1 cut(s) 478
AccI GTMKAC 1 cut(s) 155
AccII CGCG 1 cut(s) 676
AciI CCGC 4 cut(s) 304, 478, 626, 674
AclWI GGATC 1 cut(s) 346
AcoI YGGCCR 1 cut(s) 688
AcsI RAATTY 2 cut(s) 25, 462
AcyI GRCGYC 1 cut(s) 414
AfaI GTAC 1 cut(s) 734
AfiI CCNNNNNNNGG 2 cut(s) 197, 707
AgsI TTSAA 6 cut(s) 82, 276, 388, 509, 542, 616
AluBI AGCT 3 cut(s) 575, 587, 695
AluI AGCT 3 cut(s) 575, 587, 695
Alw21I GWGCWC 1 cut(s) 400
Alw26I GTCTC 1 cut(s) 110
Alw44I GTGCAC 1 cut(s) 396
AlwI GGATC 1 cut(s) 346
AoxI GGCC 2 cut(s) 680, 688
ApaLI GTGCAC 1 cut(s) 396
ApeKI GCWGC 3 cut(s) 428, 494, 609
ApoI RAATTY 2 cut(s) 25, 462
AspLEI GCGC 1 cut(s) 433
AspS9I GGNCC 1 cut(s) 345
AsuHPI GGTGA 1 cut(s) 136
AvaII GGWCC 1 cut(s) 345
BaeGI GKGCMC 1 cut(s) 400
BalI TGGCCA 1 cut(s) 690
Bbv12I GWGCWC 1 cut(s) 400
BbvI GCAGC 3 cut(s) 415, 481, 596
BccI CCATC 1 cut(s) 115
BceAI ACGGC 2 cut(s) 667, 724
BciVI GTATCC 1 cut(s) 311
BcoDI GTCTC 1 cut(s) 110
BfaI CTAG 2 cut(s) 72, 437
BfmI CTRYAG 1 cut(s) 315
BfuAI ACCTGC 2 cut(s) 308, 541
BfuI GTATCC 1 cut(s) 311
BisI GCNGC 3 cut(s) 429, 495, 610
BlsI GCNGC 3 cut(s) 430, 496, 611
BmcAI AGTACT 1 cut(s) 734
Bme18I GGWCC 1 cut(s) 345
BmgT120I GGNCC 1 cut(s) 345
BmiI GGNNCC 1 cut(s) 346
BmsI GCATC 1 cut(s) 449
BpuEI CTTGAG 1 cut(s) 605
BsaHI GRCGYC 1 cut(s) 414
Bsc4I CCNNNNNNNGG 2 cut(s) 197, 707
Bse1I ACTGG 3 cut(s) 15, 270, 579
Bse3DI GCAATG 1 cut(s) 660
BseGI GGATG 2 cut(s) 64, 486
BseLI CCNNNNNNNGG 2 cut(s) 197, 707
BseMI GCAATG 1 cut(s) 660
BseMII CTCAG 3 cut(s) 111, 164, 579
BseNI ACTGG 3 cut(s) 15, 270, 579
BseRI GAGGAG 2 cut(s) 85, 248
BseSI GKGCMC 1 cut(s) 400
BseXI GCAGC 3 cut(s) 415, 481, 596
BsgI GTGCAG 1 cut(s) 652
Bsh1236I CGCG 1 cut(s) 676
BshFI GGCC 2 cut(s) 682, 690
BsiHKAI GWGCWC 1 cut(s) 400
BslFI GGGAC 2 cut(s) 21, 569
BslI CCNNNNNNNGG 2 cut(s) 197, 707
BsmAI GTCTC 1 cut(s) 110
BsmBI CGTCTC 1 cut(s) 110
BsmFI GGGAC 2 cut(s) 21, 569
BsmI GAATGC 1 cut(s) 289
BsnI GGCC 2 cut(s) 682, 690
Bsp1286I GDGCHC 1 cut(s) 400
Bsp143I GATC 2 cut(s) 338, 362
BspACI CCGC 4 cut(s) 304, 478, 626, 674
BspANI GGCC 2 cut(s) 682, 690
BspCNI CTCAG 3 cut(s) 110, 163, 580
BspFNI CGCG 1 cut(s) 676
BspLI GGNNCC 1 cut(s) 346
BspMAI CTGCAG 1 cut(s) 319
BspMI ACCTGC 2 cut(s) 308, 541
BspPI GGATC 1 cut(s) 346
BspQI GCTCTTC 1 cut(s) 83
BsrBI CCGCTC 1 cut(s) 478
BsrDI GCAATG 1 cut(s) 660
BsrI ACTGG 3 cut(s) 15, 270, 579
BssMI GATC 2 cut(s) 338, 362
BssNI GRCGYC 1 cut(s) 414
Bst4CI ACNGT 1 cut(s) 569
Bst6I CTCTTC 1 cut(s) 83
BstACI GRCGYC 1 cut(s) 414
BstAPI GCANNNNNTGC 1 cut(s) 666
BstC8I GCNNGC 2 cut(s) 607, 667
BstDEI CTNAG 4 cut(s) 52, 97, 150, 588
BstF5I GGATG 2 cut(s) 64, 486
BstFNI CGCG 1 cut(s) 676
BstHHI GCGC 1 cut(s) 433
BstKTI GATC 2 cut(s) 341, 365
BstMAI GTCTC 1 cut(s) 110
BstMBI GATC 2 cut(s) 338, 362
BstMWI GCNNNNNNNGC 2 cut(s) 437, 666
BstSFI CTRYAG 1 cut(s) 315
BstSLI GKGCMC 1 cut(s) 400
BstUI CGCG 1 cut(s) 676
BstV1I GCAGC 3 cut(s) 415, 481, 596
BsuI GTATCC 1 cut(s) 311
BsuRI GGCC 2 cut(s) 682, 690
BtgZI GCGATG 1 cut(s) 302
BtsCI GGATG 2 cut(s) 64, 486
BtsIMutI CAGTG 2 cut(s) 574, 586
BveI ACCTGC 2 cut(s) 308, 541
Cac8I GCNNGC 2 cut(s) 607, 667
CfoI GCGC 1 cut(s) 433
Cfr13I GGNCC 1 cut(s) 345
CseI GACGC 1 cut(s) 422
Csp6I GTAC 1 cut(s) 733
CspCI CAANNNNNGTGG 2 cut(s) 487, 522
CviAII CATG 3 cut(s) 349, 392, 548
CviQI GTAC 1 cut(s) 733
DdeI CTNAG 4 cut(s) 52, 97, 150, 588
DpnI GATC 2 cut(s) 340, 364
DpnII GATC 2 cut(s) 338, 362
DraI TTTAAA 1 cut(s) 468
EaeI YGGCCR 1 cut(s) 688
Eam1104I CTCTTC 1 cut(s) 83
EarI CTCTTC 1 cut(s) 83
EciI GGCGGA 1 cut(s) 641
Eco32I GATATC 1 cut(s) 294
Eco47I GGWCC 1 cut(s) 345
EcoRV GATATC 1 cut(s) 294
Esp3I CGTCTC 1 cut(s) 110
FaeI CATG 3 cut(s) 352, 395, 551
FaiI YATR 6 cut(s) 209, 350, 375, 393, 474, 549
FaqI GGGAC 2 cut(s) 21, 569
FatI CATG 3 cut(s) 348, 391, 547
FblI GTMKAC 1 cut(s) 155
Fnu4HI GCNGC 3 cut(s) 429, 495, 610
FokI GGATG 2 cut(s) 71, 493
Fsp4HI GCNGC 3 cut(s) 429, 495, 610
FspBI CTAG 2 cut(s) 72, 437
GlaI GCGC 1 cut(s) 432
GluI GCNGC 3 cut(s) 429, 495, 610
HaeIII GGCC 2 cut(s) 682, 690
HgaI GACGC 1 cut(s) 422
HhaI GCGC 1 cut(s) 433
Hin1I GRCGYC 1 cut(s) 414
Hin1II CATG 3 cut(s) 352, 395, 551
Hin6I GCGC 1 cut(s) 431
HinP1I GCGC 1 cut(s) 431
HincII GTYRAC 1 cut(s) 412
HindII GTYRAC 1 cut(s) 412
HinfI GANTC 3 cut(s) 140, 182, 509
HphI GGTGA 1 cut(s) 136
Hpy166II GTNNAC 4 cut(s) 91, 156, 398, 412
Hpy188I TCNGA 6 cut(s) 32, 100, 145, 253, 324, 706
Hpy188III TCNNGA 1 cut(s) 506
Hpy8I GTNNAC 4 cut(s) 91, 156, 398, 412
HpyAV CCTTC 2 cut(s) 672, 711
HpyCH4III ACNGT 1 cut(s) 569
HpyCH4V TGCA 5 cut(s) 172, 317, 398, 669, 739
HpyF10VI GCNNNNNNNGC 2 cut(s) 437, 666
HpyF3I CTNAG 4 cut(s) 52, 97, 150, 588
Hsp92I GRCGYC 1 cut(s) 414
Hsp92II CATG 3 cut(s) 352, 395, 551
HspAI GCGC 1 cut(s) 431
Kzo9I GATC 2 cut(s) 338, 362
LguI GCTCTTC 1 cut(s) 83
LpnPI CCDG 7 cut(s) 251, 303, 327, 546, 592, 619, 679
Lsp1109I GCAGC 3 cut(s) 415, 481, 596
LweI GCATC 1 cut(s) 449
MaeI CTAG 2 cut(s) 72, 437
MalI GATC 2 cut(s) 340, 364
MbiI CCGCTC 1 cut(s) 478
MboI GATC 2 cut(s) 338, 362
MboII GAAGA 3 cut(s) 70, 554, 636
MhlI GDGCHC 1 cut(s) 400
MlsI TGGCCA 1 cut(s) 690
MluCI AATT 5 cut(s) 25, 325, 462, 469, 742
MluNI TGGCCA 1 cut(s) 690
MmeI TCCRAC 1 cut(s) 302
MnlI CCTC 7 cut(s) 49, 106, 159, 190, 226, 231, 451
Mox20I TGGCCA 1 cut(s) 690
MscI TGGCCA 1 cut(s) 690
MseI TTAA 4 cut(s) 215, 467, 654, 729
Msp20I TGGCCA 1 cut(s) 690
Mva1269I GAATGC 1 cut(s) 289
MvnI CGCG 1 cut(s) 676
MwoI GCNNNNNNNGC 2 cut(s) 437, 666
NdeII GATC 2 cut(s) 338, 362
NlaIII CATG 3 cut(s) 352, 395, 551
NlaIV GGNNCC 1 cut(s) 346
NmeAIII GCCGAG 1 cut(s) 139
PciSI GCTCTTC 1 cut(s) 83
PcsI WCGNNNNNNNCGW 1 cut(s) 714
PctI GAATGC 1 cut(s) 289
PfeI GAWTC 3 cut(s) 140, 182, 509
PkrI GCNGC 3 cut(s) 430, 496, 611
PspN4I GGNNCC 1 cut(s) 346
PspPI GGNCC 1 cut(s) 345
PstI CTGCAG 1 cut(s) 319
RsaI GTAC 1 cut(s) 734
RsaNI GTAC 1 cut(s) 733
SapI GCTCTTC 1 cut(s) 83
SaqAI TTAA 4 cut(s) 215, 467, 654, 729
SatI GCNGC 3 cut(s) 429, 495, 610
Sau3AI GATC 2 cut(s) 338, 362
Sau96I GGNCC 1 cut(s) 345
ScaI AGTACT 1 cut(s) 734
SduI GDGCHC 1 cut(s) 400
SetI ASST 8 cut(s) 151, 322, 535, 577, 589, 639, 697, 703
SfaNI GCATC 1 cut(s) 449
SfcI CTRYAG 1 cut(s) 315
SinI GGWCC 1 cut(s) 345
SmlI CTYRAG 1 cut(s) 620
SmoI CTYRAG 1 cut(s) 620
Sse9I AATT 5 cut(s) 25, 325, 462, 469, 742
SsiI CCGC 4 cut(s) 304, 478, 626, 674
SspMI CTAG 2 cut(s) 72, 437
TaaI ACNGT 1 cut(s) 569
TaqI TCGA 1 cut(s) 633
TasI AATT 5 cut(s) 25, 325, 462, 469, 742
TatI WGTACW 1 cut(s) 732
TfiI GAWTC 3 cut(s) 140, 182, 509
Tru1I TTAA 4 cut(s) 215, 467, 654, 729
Tru9I TTAA 4 cut(s) 215, 467, 654, 729
TscAI CASTG 2 cut(s) 574, 586
TseI GCWGC 3 cut(s) 428, 494, 609
TspDTI ATGAA 2 cut(s) 497, 564
TspRI CASTG 2 cut(s) 574, 586
VneI GTGCAC 1 cut(s) 396
VpaK11BI GGWCC 1 cut(s) 345
XapI RAATTY 2 cut(s) 25, 462
XmiI GTMKAC 1 cut(s) 155
XspI CTAG 2 cut(s) 72, 437
ZrmI AGTACT 1 cut(s) 734
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.