Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1B

Orthogroup ID

OG0000143

Physical Location & Seq

Genomic Coordinates Forward (+)

12303534 .. 12317722

Gene Structure 14189 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1BG078900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1683 bp

ATGATCTTCTCACTAAACACAGGTGAAAATATCTCCACCCAAAAGTCGGTTGAGTACCATGAATTTGGATGGCTGGGGAATGATTTGCTCGGAAATGGTTTGCCACTTCATTTGAAGAAATCTTCGGTGGCAAATTCTTCTTTTGGAGAACATAAATTAGATGATACCATGAAGACTACCTGTTACCCTGAATCAAGCCATGATAGAGGGCTTCAAGGTTACATTAATACCCCTAATTCAGGGAGTGGAGACAACTCCTCAAGTCTCTTTGCGGCGGCCCTCGCAAGCCGGACTATCATTGAAGTTCTTAGAAGGGTACCTCGCCGTCACCATCCCGACCTCAAACACCAAATTCTCGCCGCTGGACCTGATTCCGGTGATCGACCACCACTGGTAGAAGGCCCGGACGTTGGTGCCGTTGATTTCGGCTATCCGGCCTTGGTTGATTTTGCCGGTGACTTTCTTGGAATACGTGGCCAAGTAGTTATCCGGCGGGAGCGTGATCTTGCACGCGTAGCCAAGGTCGATGACGAAGTCGCCGGTGTAGTTTTTGACCGGAGAAGGAAGGAGCCCGATTGGGAATCCGTAGCGGGTCAGCTCGATGTGGGCCGGCGATGGGGTTCAGTGCCGGTCGTTTTAGGGTTTAGCATTAGACAGTGCGAGGAAGACGATCAAAGAGAGAGACGCAAATGCTCTAAGGAACGTAACATGGATCCCAACGAGACCGCACAGCAGCTTCTTGCCCTTCATGCTAGAATTGTGGGAGACATGGAGTCAGAGACTATGGTCTGTACCACACATCAACGTTTTGAAGAAGAGCCACAGTACACACATATTGACCAGAATGAATTCTCACAGAGAAGGCACAAGAAGCAGGAGGAGGAGGAGATTGTCATATGTGAATGCAAGTATGATGAAAAGGATCCTGAAAGTGCATGTGGAGAAAGGTGCTTGAATGTGTTGACCAGCACGGAATGCACTCCTGGATATTGCCCTTGTGGTGTCTATTGTAAGAATCAGAGATTTCAGAAATGTGAATATGCCAAGACAAAATTGTTTAAAACAGAAGGCCGTGGTTGGGGTCTTTTAGCCAATGAGAACATTAAGGCAGGGCAGTTTATTATTGAATACTGTGGAGAAGTGATATCATGGAAGGAAGCAAAGAAAAGATCTCATGCTTATGAAGTTGAAGGTATCAGGGATGCATTTATTATTTCTCTCAATGCCTCTGAGTCTATTGATGCCACTGTGAAGGGAAGCCTAGCGAGATTTATAAATCATTCTTGCCAACCAAATTGTGAGACAAGAAAGTGGAATGTGCTTGGGGAAATTAGGGTTGGAATATTTGCAAAACAAGATATATTAGCTGGAACTGAGTTGGCATATGACTACAATTTTGAATGGTATGGGGGTGTGAAGGTTCGCTGCCTCTGTGGTGCACCCAGCTGTTCGGGATTTCTTGGGGCAAAATCTCGTGGTTTTCAGCATCAAATCATCATCTATGACGACTCTAAGGATGAAAAGGGTGATACTTCTAGTCGAGGTAGTGGGGTTGGGTCTGATACTGCAATGGATTCCACGACTCAATCTAGTACTCATGAGGTAAACAATTGTAGCTTGAATAGCTTTGGTGTGTTGGGCATGTGGCCAAATTGGCCACATGAGTATCCTGTTCAGTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006325 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008213 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009791 GO:0009987 GO:0010224 GO:0010228 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0019538 GO:0022414 GO:0032259 GO:0032501 GO:0032502 GO:0033554 GO:0034641 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046483 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051276 GO:0051716 GO:0061458 GO:0071704 GO:0071840 GO:0090304 GO:1901360 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00310 map00310

Pfam Domains

Protein Families

SET

Protein Analysis

560

Amino Acids

62.62

Weight (kDa)

5.62

Isoelectric Point (pI)

46.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AWS	PF17907	308 - 345	1.6e-14	AWS domain
SET	PF00856	359 - 465	2e-25	SET domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000143)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76710 AT1G76710 AT1G76710 AT1G76710
fragaria_vesca	FvH4_1g20063 FvH4_2g15231 FvH4_3g04011 FvH4_3g28681 FvH4_4g01411 FvH4_4g10181 FvH4_4g15922 FvH4_4g16651 FvH4_4g16652 FvH4_5g13892 FvH4_5g13893 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g25511 FvH4_6g12551 FvH4_6g12552 FvH4_6g38841 FvH4_7g04391
malus_domestica	MD05G1031300.v1.1 MD05G1031400.v1.1 MD05G1031500.v1.1 MD08G1164400.v1.1 MD10G1032900.v1.1 MD10G1033000.v1.1 MD10G1033100.v1.1
prunus_persica	Prupe.3G240700_v2.0.a1 Prupe.7G144600_v2.0.a1 Prupe.8G038500_v2.0.a1 Prupe.8G038500_v2.0.a1
pyrus_communis	pycom05g02250 pycom05g02260 pycom05g02270 pycom05g02280 pycom08g14160 pycom10g02100 pycom10g02110 pycom10g02130
rosa_chinensis	RchiOBHm_Chr1g0329481 RchiOBHm_Chr1g0329491 RchiOBHm_Chr1g0341531 RchiOBHm_Chr3g0464811 RchiOBHm_Chr3g0494701 RchiOBHm_Chr3g0497501 RchiOBHm_Chr4g0385841 RchiOBHm_Chr5g0061181 RchiOBHm_Chr6g0263001 RchiOBHm_Chr7g0193111 RchiOBHm_Chr7g0206281 RchiOBHm_Chr7g0206311
rosa_laevigata	RLG00000018908 RLG00000028528 RLG00000028803 RLG00000029882 RLG00000029883 RLG00000030361
rosa_multiflora	Rmu_co8196328.1_g000001 Rmu_co8259135.1_g000001 Rmu_co8269185.1_g000001 Rmu_sc0000076.1_g000019 Rmu_sc0000311.1_g000007 Rmu_sc0000429.1_g000038 Rmu_sc0000429.1_g000039 Rmu_sc0000429.1_g000040 Rmu_sc0000511.1_g000005 Rmu_sc0000539.1_g000054 Rmu_sc0000566.1_g000039 Rmu_sc0000805.1_g000032 Rmu_sc0000870.1_g000073 Rmu_sc0000870.1_g000074 Rmu_sc0001010.1_g000018 Rmu_sc0001083.1_g000013 Rmu_sc0001114.1_g000011 Rmu_sc0001702.1_g000027 Rmu_sc0001779.1_g000012 Rmu_sc0002923.1_g000036 Rmu_sc0003242.1_g000011 Rmu_sc0003291.1_g000036 Rmu_sc0003393.1_g000012 Rmu_sc0003872.1_g000016 Rmu_sc0003872.1_g000017 Rmu_sc0003872.1_g000018 Rmu_sc0004084.1_g000020 Rmu_sc0004386.1_g000005 Rmu_sc0004622.1_g000005 Rmu_sc0004742.1_g000021 Rmu_sc0004755.1_g000020 Rmu_sc0004805.1_g000036 Rmu_sc0005065.1_g000006 Rmu_sc0005177.1_g000004 Rmu_sc0006373.1_g000003 Rmu_sc0006373.1_g000004 Rmu_sc0007121.1_g000002 Rmu_sc0007943.1_g000003 Rmu_sc0010368.1_g000006 Rmu_sc0010543.1_g000001 Rmu_sc0012591.1_g000006 Rmu_sc0013504.1_g000009 Rmu_sc0015025.1_g000001 Rmu_sc0016170.1_g000001 Rmu_sc0017156.1_g000001 Rmu_sc0026439.1_g000001
rosa_roxburghii	Rroxscaffold_175G00432280 Rroxscaffold_1G00030190 Rroxscaffold_1G00030880 Rroxscaffold_2G00090520 Rroxscaffold_3G00227940 Rroxscaffold_3G00233400 Rroxscaffold_3G00238500 Rroxscaffold_3G00251650 Rroxscaffold_4G00301570 Rroxscaffold_4G00321040 Rroxscaffold_5G00350880 Rroxscaffold_7G00184400
rosa_rugosa	Rorug01G0080800 Rorug01G0080900 Rorug01G0193900 Rorug02G0275900 Rorug02G0275900 Rorug02G0275900 Rorug02G0305400 Rorug02G0311800 Rorug02G0350400 Rorug02G0381300 Rorug03G0136700 Rorug03G0181900 Rorug03G0268000 Rorug04G0301600 Rorug05G0175100 Rorug05G0250700 Rorug05G0298200 Rorug05G0596000 Rorug06G0029500 Rorug07G0094300 Rorug07G0094300 Rorug07G0095400 Rorug07G0140100
rosa_samantha	Rh1AG099200 Rh1AG190500 Rh1BG078900 Rh1BG079000 Rh1BG079100 Rh1CG084600 Rh1CG084700 Rh1CG095300 Rh1CG175900 Rh1DG103300 Rh1DG150400 Rh2AG079300 Rh2AG272400 Rh2AG464800 Rh2AG507400 Rh2DG078300 Rh2DG078400 Rh3CG206900 Rh3CG295400 Rh3DG206800 Rh3DG356200 Rh4CG071500 Rh4CG179200 Rh4DG064700 Rh5CG362400 Rh7AG212300 Rh7AG226200 Rh7BG222200
rosa_wichuraiana	Rw0G009990 Rw0G011260 Rw0G011270 Rw0G012910 Rw0G013740 Rw1G007740 Rw1G013050 Rw1G014230 Rw2G014270 Rw3G012720 Rw3G028110 Rw4G006630 Rw4G015270 Rw4G016160 Rw4G031380 Rw5G011440 Rw5G029180 Rw5G048360 Rw5G048430 Rw5G048780 Rw6G005250 Rw6G006390 Rw7G002840 Rw7G014080 Rw7G019650 Rw7G032790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1274
Acc65I	GGTACC	1 cut(s)	316
AccB1I	GGYRCC	2 cut(s)	316, 413
AccII	CGCG	1 cut(s)	513
AciI	CCGC	6 cut(s)	272, 275, 360, 493, 590, 726
AclI	AACGTT	1 cut(s)	805
AclWI	GGATC	4 cut(s)	707, 720, 917, 930
AcoI	YGGCCR	3 cut(s)	475, 1646, 1655
AcsI	RAATTY	4 cut(s)	62, 133, 351, 848
AfaI	GTAC	5 cut(s)	56, 318, 793, 827, 1594
AfiI	CCNNNNNNNGG	6 cut(s)	46, 239, 374, 410, 616, 1078
AflIII	ACRYGT	1 cut(s)	511
AgsI	TTSAA	9 cut(s)	115, 215, 302, 812, 955, 1127, 1190, 1400, 1621
AhdI	GACNNNNNGTC	1 cut(s)	772
AjnI	CCWGG	1 cut(s)	982
AjuI	GAANNNNNNNTTGG	2 cut(s)	1320, 1352
AluBI	AGCT	6 cut(s)	598, 736, 1367, 1446, 1617, 1626
AluI	AGCT	6 cut(s)	598, 736, 1367, 1446, 1617, 1626
Alw21I	GWGCWC	1 cut(s)	1441
Alw26I	GTCTC	7 cut(s)	243, 269, 676, 716, 759, 773, 1295
Alw44I	GTGCAC	1 cut(s)	1437
AlwI	GGATC	4 cut(s)	707, 720, 917, 930
AoxI	GGCC	8 cut(s)	276, 400, 435, 475, 607, 1069, 1646, 1655
ApaLI	GTGCAC	1 cut(s)	1437
ApeKI	GCWGC	2 cut(s)	733, 1425
ApoI	RAATTY	4 cut(s)	62, 133, 351, 848
ArsI	GACNNNNNNTTYG	2 cut(s)	1379, 1411
AseI	ATTAAT	1 cut(s)	225
Asp700I	GAANNNNTTC	1 cut(s)	848
Asp718I	GGTACC	1 cut(s)	316
AspS9I	GGNCC	4 cut(s)	277, 365, 401, 607
AsuC2I	CCSGG	1 cut(s)	404
AsuHPI	GGTGA	5 cut(s)	35, 320, 389, 467, 1538
AvaII	GGWCC	1 cut(s)	365
BaeGI	GKGCMC	1 cut(s)	1441
BaeI	ACNNNNGTAYC	2 cut(s)	1649, 1682
BalI	TGGCCA	3 cut(s)	477, 1648, 1657
BamHI	GGATCC	2 cut(s)	712, 922
BanI	GGYRCC	2 cut(s)	316, 413
BanII	GRGCYC	1 cut(s)	573
BauI	CACGAG	1 cut(s)	1473
BbsI	GAAGAC	2 cut(s)	179, 672
Bbv12I	GWGCWC	1 cut(s)	1441
BbvI	GCAGC	2 cut(s)	745, 1412
BccI	CCATC	3 cut(s)	63, 339, 609
BceAI	ACGGC	3 cut(s)	309, 401, 1056
BciT130I	CCWGG	1 cut(s)	984
BciVI	GTATCC	1 cut(s)	1677
BcnI	CCSGG	1 cut(s)	404
BcoDI	GTCTC	7 cut(s)	243, 269, 676, 716, 759, 773, 1295
BfaI	CTAG	4 cut(s)	753, 1262, 1536, 1590
BfuI	GTATCC	1 cut(s)	1677
BglI	GCCNNNNNGGC	1 cut(s)	1654
BglII	AGATCT	1 cut(s)	1169
BisI	GCNGC	5 cut(s)	273, 276, 360, 734, 1426
BlsI	GCNGC	5 cut(s)	274, 277, 361, 735, 1427
BmcAI	AGTACT	1 cut(s)	1594
Bme1390I	CCNGG	2 cut(s)	404, 984
Bme18I	GGWCC	1 cut(s)	365
BmeRI	GACNNNNNGTC	1 cut(s)	772
BmgT120I	GGNCC	4 cut(s)	277, 365, 401, 607
BmiI	GGNNCC	5 cut(s)	318, 415, 570, 714, 924
BmrFI	CCNGG	2 cut(s)	404, 984
BmsI	GCATC	3 cut(s)	1192, 1231, 1495
BoxI	GACNNNNGTC	1 cut(s)	785
BpiI	GAAGAC	2 cut(s)	179, 672
BpuEI	CTTGAG	1 cut(s)	244
BpuMI	CCSGG	1 cut(s)	404
BsaAI	YACGTR	1 cut(s)	473
BsaI	GGTCTC	1 cut(s)	716
BsaJI	CCNNGG	3 cut(s)	438, 519, 1072
BsaWI	WCCGGW	2 cut(s)	374, 555
Bsc4I	CCNNNNNNNGG	6 cut(s)	46, 239, 374, 410, 616, 1078
Bse118I	RCCGGY	4 cut(s)	452, 539, 609, 628
Bse1I	ACTGG	1 cut(s)	396
Bse3DI	GCAATG	1 cut(s)	1575
BseBI	CCWGG	1 cut(s)	984
BseDI	CCNNGG	3 cut(s)	438, 519, 1072
BseGI	GGATG	4 cut(s)	74, 331, 1207, 1522
BseLI	CCNNNNNNNGG	6 cut(s)	46, 239, 374, 410, 616, 1078
BseMI	GCAATG	1 cut(s)	1575
BseMII	CTCAG	2 cut(s)	1221, 1365
BseNI	ACTGG	1 cut(s)	396
BseRI	GAGGAG	4 cut(s)	247, 893, 896, 899
BseSI	GKGCMC	1 cut(s)	1441
BseXI	GCAGC	2 cut(s)	745, 1412
BseYI	CCCAGC	2 cut(s)	73, 1442
Bsh1236I	CGCG	1 cut(s)	513
Bsh1285I	CGRYCG	1 cut(s)	633
BshFI	GGCC	8 cut(s)	278, 402, 437, 477, 609, 1071, 1648, 1657
BshNI	GGYRCC	2 cut(s)	316, 413
BsiEI	CGRYCG	1 cut(s)	633
BsiHKAI	GWGCWC	1 cut(s)	1441
BslI	CCNNNNNNNGG	6 cut(s)	46, 239, 374, 410, 616, 1078
BsmAI	GTCTC	7 cut(s)	243, 269, 676, 716, 759, 773, 1295
BsmBI	CGTCTC	1 cut(s)	676
BsmI	GAATGC	2 cut(s)	908, 980
BsnI	GGCC	8 cut(s)	278, 402, 437, 477, 609, 1071, 1648, 1657
Bso31I	GGTCTC	1 cut(s)	716
Bsp1286I	GDGCHC	2 cut(s)	573, 1441
Bsp143I	GATC	7 cut(s)	3, 379, 502, 670, 712, 922, 1169
BspACI	CCGC	6 cut(s)	272, 275, 360, 493, 590, 726
BspANI	GGCC	8 cut(s)	278, 402, 437, 477, 609, 1071, 1648, 1657
BspCNI	CTCAG	2 cut(s)	1222, 1366
BspFNI	CGCG	1 cut(s)	513
BspHI	TCATGA	1 cut(s)	1597
BspLI	GGNNCC	5 cut(s)	318, 415, 570, 714, 924
BspPI	GGATC	4 cut(s)	707, 720, 917, 930
BspQI	GCTCTTC	1 cut(s)	810
BspT107I	GGYRCC	2 cut(s)	316, 413
BspTNI	GGTCTC	1 cut(s)	716
BsrDI	GCAATG	1 cut(s)	1575
BsrFI	RCCGGY	4 cut(s)	452, 539, 609, 628
BsrI	ACTGG	1 cut(s)	396
BssAI	RCCGGY	4 cut(s)	452, 539, 609, 628
BssECI	CCNNGG	3 cut(s)	438, 519, 1072
BssMI	GATC	7 cut(s)	3, 379, 502, 670, 712, 922, 1169
BssSI	CACGAG	1 cut(s)	1473
BssT1I	CCWWGG	2 cut(s)	438, 519
Bst2BI	CACGAG	1 cut(s)	1473
Bst2UI	CCWGG	1 cut(s)	984
Bst4CI	ACNGT	4 cut(s)	657, 825, 1133, 1249
Bst6I	CTCTTC	1 cut(s)	810
BstAPI	GCANNNNNTGC	1 cut(s)	975
BstBAI	YACGTR	1 cut(s)	473
BstC8I	GCNNGC	3 cut(s)	286, 511, 611
BstDEI	CTNAG	5 cut(s)	308, 696, 1230, 1374, 1512
BstDSI	CCRYGG	1 cut(s)	1072
BstENI	CCTNNNNNAGG	1 cut(s)	237
BstF5I	GGATG	4 cut(s)	74, 331, 1207, 1522
BstFNI	CGCG	1 cut(s)	513
BstKTI	GATC	7 cut(s)	6, 382, 505, 673, 715, 925, 1172
BstMAI	GTCTC	7 cut(s)	243, 269, 676, 716, 759, 773, 1295
BstMBI	GATC	7 cut(s)	3, 379, 502, 670, 712, 922, 1169
BstMCI	CGRYCG	1 cut(s)	633
BstMWI	GCNNNNNNNGC	7 cut(s)	281, 515, 749, 871, 975, 1623, 1654
BstNI	CCWGG	1 cut(s)	984
BstNSI	RCATGY	2 cut(s)	939, 1645
BstPAI	GACNNNNGTC	1 cut(s)	785
BstSCI	CCNGG	2 cut(s)	402, 982
BstSLI	GKGCMC	1 cut(s)	1441
BstUI	CGCG	1 cut(s)	513
BstV1I	GCAGC	2 cut(s)	745, 1412
BstV2I	GAAGAC	2 cut(s)	179, 672
BstX2I	RGATCY	3 cut(s)	712, 922, 1169
BstXI	CCANNNNNNTGG	1 cut(s)	65
BstYI	RGATCY	3 cut(s)	712, 922, 1169
BsuI	GTATCC	1 cut(s)	1677
BsuRI	GGCC	8 cut(s)	278, 402, 437, 477, 609, 1071, 1648, 1657
BtgI	CCRYGG	1 cut(s)	1072
BtgZI	GCGATG	1 cut(s)	628
BtsCI	GGATG	4 cut(s)	74, 331, 1207, 1522
BtsIMutI	CAGTG	4 cut(s)	389, 630, 662, 1245
Cac8I	GCNNGC	3 cut(s)	286, 511, 611
CciI	TCATGA	1 cut(s)	1597
Cfr10I	RCCGGY	4 cut(s)	452, 539, 609, 628
Cfr13I	GGNCC	4 cut(s)	277, 365, 401, 607
CseI	GACGC	1 cut(s)	693
Csp6I	GTAC	5 cut(s)	55, 317, 792, 826, 1593
CspCI	CAANNNNNGTGG	2 cut(s)	93, 128
CviQI	GTAC	5 cut(s)	55, 317, 792, 826, 1593
DdeI	CTNAG	5 cut(s)	308, 696, 1230, 1374, 1512
DpnI	GATC	7 cut(s)	5, 381, 504, 672, 714, 924, 1171
DpnII	GATC	7 cut(s)	3, 379, 502, 670, 712, 922, 1169
DraI	TTTAAA	1 cut(s)	1060
DriI	GACNNNNNGTC	1 cut(s)	772
EaeI	YGGCCR	3 cut(s)	475, 1646, 1655
Eam1104I	CTCTTC	1 cut(s)	810
Eam1105I	GACNNNNNGTC	1 cut(s)	772
EarI	CTCTTC	1 cut(s)	810
Eco130I	CCWWGG	2 cut(s)	438, 519
Eco24I	GRGCYC	1 cut(s)	573
Eco31I	GGTCTC	1 cut(s)	716
Eco32I	GATATC	1 cut(s)	1146
Eco47I	GGWCC	1 cut(s)	365
EcoNI	CCTNNNNNAGG	1 cut(s)	237
EcoRI	GAATTC	1 cut(s)	848
EcoRII	CCWGG	1 cut(s)	982
EcoRV	GATATC	1 cut(s)	1146
EcoT14I	CCWWGG	2 cut(s)	438, 519
EcoT22I	ATGCAT	1 cut(s)	1207
EcoT38I	GRGCYC	1 cut(s)	573
ErhI	CCWWGG	2 cut(s)	438, 519
Esp3I	CGTCTC	1 cut(s)	676
FauI	CCCGC	2 cut(s)	486, 583
FauNDI	CATATG	2 cut(s)	896, 1384
Fnu4HI	GCNGC	5 cut(s)	273, 276, 360, 734, 1426
FokI	GGATG	4 cut(s)	81, 318, 1214, 1529
FriOI	GRGCYC	1 cut(s)	573
Fsp4HI	GCNGC	5 cut(s)	273, 276, 360, 734, 1426
FspBI	CTAG	4 cut(s)	753, 1262, 1536, 1590
GluI	GCNGC	5 cut(s)	273, 276, 360, 734, 1426
GsaI	CCCAGC	2 cut(s)	77, 1446
HaeIII	GGCC	8 cut(s)	278, 402, 437, 477, 609, 1071, 1648, 1657
HgaI	GACGC	1 cut(s)	693
HincII	GTYRAC	1 cut(s)	963
HindII	GTYRAC	1 cut(s)	963
HinfI	GANTC	9 cut(s)	191, 371, 581, 773, 1015, 1232, 1508, 1574, 1582
HphI	GGTGA	5 cut(s)	35, 320, 389, 467, 1538
Hpy166II	GTNNAC	4 cut(s)	828, 963, 1439, 1606
Hpy188I	TCNGA	6 cut(s)	92, 778, 1020, 1029, 1231, 1561
Hpy188III	TCNNGA	5 cut(s)	335, 926, 1452, 1598, 1680
Hpy8I	GTNNAC	4 cut(s)	828, 963, 1439, 1606
HpyCH4III	ACNGT	4 cut(s)	657, 825, 1133, 1249
HpyCH4IV	ACGT	4 cut(s)	408, 472, 703, 805
HpyCH4V	TGCA	8 cut(s)	509, 906, 935, 978, 1205, 1349, 1439, 1568
HpyF10VI	GCNNNNNNNGC	7 cut(s)	281, 515, 749, 871, 975, 1623, 1654
HpyF3I	CTNAG	5 cut(s)	308, 696, 1230, 1374, 1512
HpySE526I	ACGT	4 cut(s)	408, 472, 703, 805
KpnI	GGTACC	1 cut(s)	320
KroI	GCCGGC	1 cut(s)	609
KroNI	GCCGGC	1 cut(s)	611
Kzo9I	GATC	7 cut(s)	3, 379, 502, 670, 712, 922, 1169
LguI	GCTCTTC	1 cut(s)	810
LmnI	GCTCC	2 cut(s)	496, 568
Lsp1109I	GCAGC	2 cut(s)	745, 1412
LweI	GCATC	3 cut(s)	1192, 1231, 1495
MaeI	CTAG	4 cut(s)	753, 1262, 1536, 1590
MaeII	ACGT	4 cut(s)	408, 472, 703, 805
MaeIII	GTNAC	5 cut(s)	182, 218, 326, 455, 704
MalI	GATC	7 cut(s)	5, 381, 504, 672, 714, 924, 1171
MboI	GATC	7 cut(s)	3, 379, 502, 670, 712, 922, 1169
MboII	GAAGA	7 cut(s)	114, 127, 129, 184, 677, 824, 827
MfeI	CAATTG	1 cut(s)	1609
MflI	RGATCY	3 cut(s)	712, 922, 1169
MhlI	GDGCHC	2 cut(s)	573, 1441
MlsI	TGGCCA	3 cut(s)	477, 1648, 1657
MluI	ACGCGT	1 cut(s)	511
MluNI	TGGCCA	3 cut(s)	477, 1648, 1657
MlyI	GAGTC	4 cut(s)	782, 1241, 1502, 1576
MmeI	TCCRAC	1 cut(s)	1318
Mox20I	TGGCCA	3 cut(s)	477, 1648, 1657
Mph1103I	ATGCAT	1 cut(s)	1207
MroNI	GCCGGC	1 cut(s)	609
MroXI	GAANNNNTTC	1 cut(s)	848
MscI	TGGCCA	3 cut(s)	477, 1648, 1657
MseI	TTAA	3 cut(s)	225, 1059, 1104
MslI	CAYNNNNRTG	1 cut(s)	1179
Msp20I	TGGCCA	3 cut(s)	477, 1648, 1657
MspA1I	CMGCKG	2 cut(s)	362, 1446
MspR9I	CCNGG	2 cut(s)	404, 984
MunI	CAATTG	1 cut(s)	1609
Mva1269I	GAATGC	2 cut(s)	908, 980
MvaI	CCWGG	1 cut(s)	984
MvnI	CGCG	1 cut(s)	513
MwoI	GCNNNNNNNGC	7 cut(s)	281, 515, 749, 871, 975, 1623, 1654
NaeI	GCCGGC	1 cut(s)	611
NciI	CCSGG	1 cut(s)	404
NdeI	CATATG	2 cut(s)	896, 1384
NdeII	GATC	7 cut(s)	3, 379, 502, 670, 712, 922, 1169
NgoMIV	GCCGGC	1 cut(s)	609
NlaIV	GGNNCC	5 cut(s)	318, 415, 570, 714, 924
NmuCI	GTSAC	2 cut(s)	326, 455
NsiI	ATGCAT	1 cut(s)	1207
NspI	RCATGY	2 cut(s)	939, 1645
PagI	TCATGA	1 cut(s)	1597
PciSI	GCTCTTC	1 cut(s)	810
PcsI	WCGNNNNNNNCGW	1 cut(s)	414
PctI	GAATGC	2 cut(s)	908, 980
PdiI	GCCGGC	1 cut(s)	611
PdmI	GAANNNNTTC	1 cut(s)	848
PfeI	GAWTC	5 cut(s)	191, 371, 581, 1015, 1574
PflFI	GACNNNGTC	1 cut(s)	533
PfoI	TCCNGGA	1 cut(s)	982
PkrI	GCNGC	5 cut(s)	274, 277, 361, 735, 1427
PleI	GAGTC	4 cut(s)	781, 1240, 1502, 1576
PpsI	GAGTC	4 cut(s)	781, 1240, 1502, 1576
Ppu21I	YACGTR	1 cut(s)	473
PshAI	GACNNNNGTC	1 cut(s)	785
PshBI	ATTAAT	1 cut(s)	225
PsiI	TTATAA	1 cut(s)	1274
Psp1406I	AACGTT	1 cut(s)	805
Psp6I	CCWGG	1 cut(s)	982
PspFI	CCCAGC	2 cut(s)	73, 1442
PspGI	CCWGG	1 cut(s)	982
PspN4I	GGNNCC	5 cut(s)	318, 415, 570, 714, 924
PspPI	GGNCC	4 cut(s)	277, 365, 401, 607
PsuI	RGATCY	3 cut(s)	712, 922, 1169
PsyI	GACNNNGTC	1 cut(s)	533
PvuII	CAGCTG	1 cut(s)	1446
RsaI	GTAC	5 cut(s)	56, 318, 793, 827, 1594
RsaNI	GTAC	5 cut(s)	55, 317, 792, 826, 1593
RseI	CAYNNNNRTG	1 cut(s)	1179
SapI	GCTCTTC	1 cut(s)	810
SaqAI	TTAA	3 cut(s)	225, 1059, 1104
SatI	GCNGC	5 cut(s)	273, 276, 360, 734, 1426
Sau3AI	GATC	7 cut(s)	3, 379, 502, 670, 712, 922, 1169
Sau96I	GGNCC	4 cut(s)	277, 365, 401, 607
ScaI	AGTACT	1 cut(s)	1594
SchI	GAGTC	4 cut(s)	782, 1241, 1502, 1576
ScrFI	CCNGG	2 cut(s)	404, 984
SduI	GDGCHC	2 cut(s)	573, 1441
SfaNI	GCATC	3 cut(s)	1192, 1231, 1495
SfiI	GGCCNNNNNGGCC	1 cut(s)	1654
SgrAI	CRCCGGYG	1 cut(s)	539
SinI	GGWCC	1 cut(s)	365
SmiMI	CAYNNNNRTG	1 cut(s)	1179
SmlI	CTYRAG	1 cut(s)	259
SmoI	CTYRAG	1 cut(s)	259
SsiI	CCGC	6 cut(s)	272, 275, 360, 493, 590, 726
SspI	AATATT	1 cut(s)	1344
SspMI	CTAG	4 cut(s)	753, 1262, 1536, 1590
StyD4I	CCNGG	2 cut(s)	402, 982
StyI	CCWWGG	2 cut(s)	438, 519
TaaI	ACNGT	4 cut(s)	657, 825, 1133, 1249
TaiI	ACGT	4 cut(s)	411, 475, 706, 808
TaqI	TCGA	4 cut(s)	382, 525, 600, 1540
TatI	WGTACW	2 cut(s)	825, 1592
TauI	GCSGC	3 cut(s)	275, 278, 362
TfiI	GAWTC	5 cut(s)	191, 371, 581, 1015, 1574
Tru1I	TTAA	3 cut(s)	225, 1059, 1104
Tru9I	TTAA	3 cut(s)	225, 1059, 1104
TscAI	CASTG	4 cut(s)	396, 630, 662, 1252
TseFI	GTSAC	2 cut(s)	326, 455
TseI	GCWGC	2 cut(s)	733, 1425
Tsp45I	GTSAC	2 cut(s)	326, 455
TspDTI	ATGAA	8 cut(s)	75, 98, 185, 737, 861, 930, 1197, 1533
TspGWI	ACGGA	2 cut(s)	574, 986
TspRI	CASTG	4 cut(s)	396, 630, 662, 1252
Tth111I	GACNNNGTC	1 cut(s)	533
VneI	GTGCAC	1 cut(s)	1437
VpaK11BI	GGWCC	1 cut(s)	365
VspI	ATTAAT	1 cut(s)	225
XagI	CCTNNNNNAGG	1 cut(s)	237
XapI	RAATTY	4 cut(s)	62, 133, 351, 848
XceI	RCATGY	2 cut(s)	939, 1645
XmnI	GAANNNNTTC	1 cut(s)	848
XspI	CTAG	4 cut(s)	753, 1262, 1536, 1590
ZrmI	AGTACT	1 cut(s)	1594
Zsp2I	ATGCAT	1 cut(s)	1207

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.