Rw7G032790

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000143
Physical Location & Seq
Reverse (-)
47987538 .. 47991127
3590 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G032790.1

Sequence Viewer

Length: 2010 bp
ATGGAACAAGAGCCCCTGGATGCTGGGTTGCAAATTTCTATGTCTTCAGATGATATGGAAGAAGACTTACAGTCAAATCACCCGTCTAGTATCATTGAAATAATTATTATTTTTTTCTTTGATTTGCTTGAAGGCCCCTCTATGATTGATGATTCTGATGAATTCCTCTCATTATCGACGAAATTTTTTGAAAATCGAGAAGACCTTGTCAGTGCTATTCGTAAGATTGGGTTGCTGCAAGGTTACGTTATGGTAATTAAAAGATCTAGAAGCAATAGAGATGTGGCTATTGGTTGTGATAGAGGTGGTTGTTATCGAACCTGCTCTGCACTTGAGGAGAAGAAAAAGAATTCAGCTTCTCATCGGATAGATTGCCCTTTCAAAATTGTGGGAAGAAGGACAGCTGAAGGGTTGTGGAAGGTCGAGATAAGTAGCTTGTTACATAATCATGAGCCTTCCACTGACATGGCTGGACATCCATATTGTCGTCGGTTTACTAAAGAGGAAGCCTCACAAGTTGAAAAAATGAGTCGAGCTGGCATAAAACCACGTCAAATTCTCTCTTCGCTTCGACAAAGTAATCCTGATCTTCTAGCTGTTTCCAGAAATATATATAGCAAGACATCTCAGTTTAGAAGGGAGAGTCTAGGTGGGCGTTCGATTATTCAAGCATTATTAGATGAGCTTGGTGGTGCTGGTTTTTCTCATAATGTCAAATATGATCACTCTGGTCATTTGACTCATCTATTCTTTGCTCATCCCACTTCCATTGAGTTGACTAAAAGCTACTCTAATGTCTTTGTGATGGATTGTACTTATAAGACAAATAAGTACAAGATGCCATTACTTGAGATTGTAGGAGTGTCGAGTTTCAACACATCATTCTATTCGTGTTTTGTTTTCATGCAAAAAGAGGAACAACAGGATTATCAGTGGGCTCTTGAAATGTTCAGTAAGTTGTTGGGAGATGGTAATCATCCATTGGCGATTATAACTGATAGGGAGTTAGCTTTAATGAAAGCAATGCAAGTTGTGTTTCCGATGACTCCTAATCTTTTATGCATATGGCATATTGAAAAAAATATTCTTGCACATTGTAAGGGTCAGTTTAAGGAAGATGCAGATTGGGTTGGTTTTATGTCTTCTTGGAGTACCCTTGTAAAGTCTTGGGACGTGTCAACGTTTAATGAAGCTTGGAACCATTTTCAAATTGAGTACAAAGACTATGCTTCCATTCTAACTTACATTGGCAATACTTGGCTTCCATGGAAAGAGAGGTTTGTATTTGCATGGACTGGACAAATTTCACACTTTGGTAATAATGTTACTTCTAGAGCAAAAGGTGCACATGGAATCTTAAAGAAATATCTTCAAGTTTCTACTGGTGGTCTCCGTGAAGTGAAGGAAAATATTTGTCTTGCTATTCAAAATCAGTTTCAAGAAATTAGAACTCAACTTGCAAGTGAAAAAATTCGTGTTCCTCAAAAGCTTTGCATCCCTTTCTTTAAAAAGGTGATTAATAAGGTATCTTTCTATGCTTTGTTTGAGTTACAAAAGCAATATTTGTTGGCAAATACCAAAGACTATTCATCCCAATGCAAGGGCCAGTTTTCCAAAACCATGGGTCTTCCATGTGTGCACATGATCAAGGAGATGAATATTGAAGTGCTGCCTTTAAATCAGATTCATGAGCAATGGAGGATTGGCACAAGATCATTCACTAATGATCATCGTGCAAGCTTGGATCATGAAGGTCCATTTAGTAGTCTTTTATCTGAGGTTAAAGAGAAGTACGAAAAACAGCCGCTAGCGCAAAAAGAAAATACCATAAGGCAGCTTTCTCAGATTCTTGGTGCATCTTGTCCTTTAATTTTTGAACCTACTCTTCAACCTCACAAAGGCCGTCCGGTAGGATCAAATAAAAGAAAGGAAACTAGCTCTGCAAGGCGGGAACCTTCATATTTTGAGAGAGTGGAGAAGGCACCTCGAAAATGTAGAAAATGGGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE

Protein Analysis

669

Amino Acids

76.81

Weight (kDa)

8.81

Isoelectric Point (pI)

51.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ZSWIM1-3_RNaseH-like PF21056 237 - 349 4.2e-12 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE PF10551 266 - 361 4.8e-25 MULE transposase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000143)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G76710 AT1G76710 AT1G76710 AT1G76710
fragaria_vesca FvH4_1g20063 FvH4_2g15231 FvH4_3g04011 FvH4_3g28681 FvH4_4g01411 FvH4_4g10181 FvH4_4g15922 FvH4_4g16651 FvH4_4g16652 FvH4_5g13892 FvH4_5g13893 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g25511 FvH4_6g12551 FvH4_6g12552 FvH4_6g38841 FvH4_7g04391
malus_domestica MD05G1031300.v1.1 MD05G1031400.v1.1 MD05G1031500.v1.1 MD08G1164400.v1.1 MD10G1032900.v1.1 MD10G1033000.v1.1 MD10G1033100.v1.1
prunus_persica Prupe.3G240700_v2.0.a1 Prupe.7G144600_v2.0.a1 Prupe.8G038500_v2.0.a1 Prupe.8G038500_v2.0.a1
pyrus_communis pycom05g02250 pycom05g02260 pycom05g02270 pycom05g02280 pycom08g14160 pycom10g02100 pycom10g02110 pycom10g02130
rosa_chinensis RchiOBHm_Chr1g0329481 RchiOBHm_Chr1g0329491 RchiOBHm_Chr1g0341531 RchiOBHm_Chr3g0464811 RchiOBHm_Chr3g0494701 RchiOBHm_Chr3g0497501 RchiOBHm_Chr4g0385841 RchiOBHm_Chr5g0061181 RchiOBHm_Chr6g0263001 RchiOBHm_Chr7g0193111 RchiOBHm_Chr7g0206281 RchiOBHm_Chr7g0206311
rosa_laevigata RLG00000018908 RLG00000028528 RLG00000028803 RLG00000029882 RLG00000029883 RLG00000030361
rosa_multiflora Rmu_co8196328.1_g000001 Rmu_co8259135.1_g000001 Rmu_co8269185.1_g000001 Rmu_sc0000076.1_g000019 Rmu_sc0000311.1_g000007 Rmu_sc0000429.1_g000038 Rmu_sc0000429.1_g000039 Rmu_sc0000429.1_g000040 Rmu_sc0000511.1_g000005 Rmu_sc0000539.1_g000054 Rmu_sc0000566.1_g000039 Rmu_sc0000805.1_g000032 Rmu_sc0000870.1_g000073 Rmu_sc0000870.1_g000074 Rmu_sc0001010.1_g000018 Rmu_sc0001083.1_g000013 Rmu_sc0001114.1_g000011 Rmu_sc0001702.1_g000027 Rmu_sc0001779.1_g000012 Rmu_sc0002923.1_g000036 Rmu_sc0003242.1_g000011 Rmu_sc0003291.1_g000036 Rmu_sc0003393.1_g000012 Rmu_sc0003872.1_g000016 Rmu_sc0003872.1_g000017 Rmu_sc0003872.1_g000018 Rmu_sc0004084.1_g000020 Rmu_sc0004386.1_g000005 Rmu_sc0004622.1_g000005 Rmu_sc0004742.1_g000021 Rmu_sc0004755.1_g000020 Rmu_sc0004805.1_g000036 Rmu_sc0005065.1_g000006 Rmu_sc0005177.1_g000004 Rmu_sc0006373.1_g000003 Rmu_sc0006373.1_g000004 Rmu_sc0007121.1_g000002 Rmu_sc0007943.1_g000003 Rmu_sc0010368.1_g000006 Rmu_sc0010543.1_g000001 Rmu_sc0012591.1_g000006 Rmu_sc0013504.1_g000009 Rmu_sc0015025.1_g000001 Rmu_sc0016170.1_g000001 Rmu_sc0017156.1_g000001 Rmu_sc0026439.1_g000001
rosa_roxburghii Rroxscaffold_175G00432280 Rroxscaffold_1G00030190 Rroxscaffold_1G00030880 Rroxscaffold_2G00090520 Rroxscaffold_3G00227940 Rroxscaffold_3G00233400 Rroxscaffold_3G00238500 Rroxscaffold_3G00251650 Rroxscaffold_4G00301570 Rroxscaffold_4G00321040 Rroxscaffold_5G00350880 Rroxscaffold_7G00184400
rosa_rugosa Rorug01G0080800 Rorug01G0080900 Rorug01G0193900 Rorug02G0275900 Rorug02G0275900 Rorug02G0275900 Rorug02G0305400 Rorug02G0311800 Rorug02G0350400 Rorug02G0381300 Rorug03G0136700 Rorug03G0181900 Rorug03G0268000 Rorug04G0301600 Rorug05G0175100 Rorug05G0250700 Rorug05G0298200 Rorug05G0596000 Rorug06G0029500 Rorug07G0094300 Rorug07G0094300 Rorug07G0095400 Rorug07G0140100
rosa_samantha Rh1AG099200 Rh1AG190500 Rh1BG078900 Rh1BG079000 Rh1BG079100 Rh1CG084600 Rh1CG084700 Rh1CG095300 Rh1CG175900 Rh1DG103300 Rh1DG150400 Rh2AG079300 Rh2AG272400 Rh2AG464800 Rh2AG507400 Rh2DG078300 Rh2DG078400 Rh3CG206900 Rh3CG295400 Rh3DG206800 Rh3DG356200 Rh4CG071500 Rh4CG179200 Rh4DG064700 Rh5CG362400 Rh7AG212300 Rh7AG226200 Rh7BG222200
rosa_wichuraiana Rw0G009990 Rw0G011260 Rw0G011270 Rw0G012910 Rw0G013740 Rw1G007740 Rw1G013050 Rw1G014230 Rw2G014270 Rw3G012720 Rw3G028110 Rw4G006630 Rw4G015270 Rw4G016160 Rw4G031380 Rw5G011440 Rw5G029180 Rw5G048360 Rw5G048430 Rw5G048780 Rw6G005250 Rw6G006390 Rw7G002840 Rw7G014080 Rw7G019650 Rw7G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 819, 992
Acc36I ACCTGC 1 cut(s) 329
AccB1I GGYRCC 1 cut(s) 1981
AciI CCGC 2 cut(s) 1805, 1948
AclI AACGTT 1 cut(s) 1181
AclWI GGATC 2 cut(s) 1752, 1921
AcsI RAATTY 7 cut(s) 33, 161, 182, 349, 555, 1302, 1470
AcuI CTGAAG 2 cut(s) 30, 426
AfaI GTAC 5 cut(s) 814, 833, 1153, 1217, 1793
AfiI CCNNNNNNNGG 2 cut(s) 1600, 1898
AflIII ACRYGT 1 cut(s) 1173
AhdI GACNNNNNGTC 1 cut(s) 70
AjiI CACGTC 2 cut(s) 551, 1174
AjnI CCWGG 1 cut(s) 15
Alw21I GWGCWC 2 cut(s) 1348, 1641
Alw26I GTCTC 1 cut(s) 1394
Alw44I GTGCAC 2 cut(s) 1344, 1637
AlwI GGATC 2 cut(s) 1752, 1921
AoxI GGCC 3 cut(s) 133, 1603, 1900
ApaLI GTGCAC 2 cut(s) 1344, 1637
ApeKI GCWGC 3 cut(s) 235, 1669, 1834
ApoI RAATTY 7 cut(s) 33, 161, 182, 349, 555, 1302, 1470
ArsI GACNNNNNNTTYG 2 cut(s) 68, 100
AseI ATTAAT 1 cut(s) 1518
Asp700I GAANNNNTTC 1 cut(s) 1470
AspLEI GCGC 1 cut(s) 1813
AspS9I GGNCC 3 cut(s) 134, 1603, 1754
AsuHPI GGTGA 2 cut(s) 71, 1525
AsuNHI GCTAGC 1 cut(s) 1807
AvaII GGWCC 1 cut(s) 1754
BaeGI GKGCMC 2 cut(s) 1348, 1641
BanI GGYRCC 1 cut(s) 1981
BanII GRGCYC 2 cut(s) 15, 940
BarI GAAGNNNNNNTAC 2 cut(s) 51, 83
BbsI GAAGAC 5 cut(s) 36, 69, 207, 1134, 1619
Bbv12I GWGCWC 2 cut(s) 1348, 1641
BbvI GCAGC 3 cut(s) 222, 1656, 1846
BccI CCATC 2 cut(s) 799, 962
BceAI ACGGC 1 cut(s) 1887
BciT130I CCWGG 1 cut(s) 17
BclI TGATCA 3 cut(s) 721, 1644, 1726
BcoDI GTCTC 1 cut(s) 1394
BfaI CTAG 7 cut(s) 87, 267, 593, 647, 1332, 1808, 1935
BfuAI ACCTGC 1 cut(s) 329
BglII AGATCT 1 cut(s) 263
BisI GCNGC 4 cut(s) 236, 1670, 1805, 1835
BlsI GCNGC 4 cut(s) 237, 1671, 1806, 1836
Bme1390I CCNGG 1 cut(s) 17
Bme18I GGWCC 1 cut(s) 1754
BmeRI GACNNNNNGTC 1 cut(s) 70
BmgBI CACGTC 2 cut(s) 551, 1174
BmgT120I GGNCC 3 cut(s) 134, 1603, 1754
BmiI GGNNCC 4 cut(s) 136, 1199, 1953, 1983
BmrFI CCNGG 1 cut(s) 17
BmsI GCATC 5 cut(s) 10, 828, 1108, 1503, 1865
BmtI GCTAGC 1 cut(s) 1811
BpiI GAAGAC 5 cut(s) 36, 69, 207, 1134, 1619
BplI GAGNNNNNCTC 2 cut(s) 494, 526
BpuEI CTTGAG 2 cut(s) 353, 869
BsaBI GATNNNNATC 1 cut(s) 972
BsaI GGTCTC 1 cut(s) 1394
BsaJI CCNNGG 3 cut(s) 15, 1265, 1620
BsaWI WCCGGW 1 cut(s) 1906
Bsc4I CCNNNNNNNGG 2 cut(s) 1600, 1898
Bse1I ACTGG 3 cut(s) 1300, 1387, 1606
Bse3DI GCAATG 2 cut(s) 1029, 1700
Bse8I GATNNNNATC 1 cut(s) 972
BseBI CCWGG 1 cut(s) 17
BseDI CCNNGG 3 cut(s) 15, 1265, 1620
BseGI GGATG 6 cut(s) 25, 475, 757, 976, 1494, 1589
BseJI GATNNNNATC 1 cut(s) 972
BseLI CCNNNNNNNGG 2 cut(s) 1600, 1898
BseMI GCAATG 2 cut(s) 1029, 1700
BseMII CTCAG 3 cut(s) 641, 1767, 1856
BseNI ACTGG 3 cut(s) 1300, 1387, 1606
BseRI GAGGAG 1 cut(s) 350
BseSI GKGCMC 2 cut(s) 1348, 1641
BseXI GCAGC 3 cut(s) 222, 1656, 1846
BseYI CCCAGC 1 cut(s) 23
BsgI GTGCAG 1 cut(s) 312
BshFI GGCC 3 cut(s) 135, 1605, 1902
BshNI GGYRCC 1 cut(s) 1981
BsiHKAI GWGCWC 2 cut(s) 1348, 1641
BsiSI CCGG 1 cut(s) 1907
BslFI GGGAC 1 cut(s) 1184
BslI CCNNNNNNNGG 2 cut(s) 1600, 1898
BsmAI GTCTC 1 cut(s) 1394
BsmFI GGGAC 1 cut(s) 1184
BsnI GGCC 3 cut(s) 135, 1605, 1902
Bso31I GGTCTC 1 cut(s) 1394
Bsp1286I GDGCHC 4 cut(s) 15, 940, 1348, 1641
Bsp143I GATC 8 cut(s) 263, 586, 721, 1644, 1712, 1726, 1744, 1913
Bsp19I CCATGG 2 cut(s) 1265, 1620
BspACI CCGC 2 cut(s) 1805, 1948
BspANI GGCC 3 cut(s) 135, 1605, 1902
BspCNI CTCAG 3 cut(s) 640, 1768, 1855
BspHI TCATGA 3 cut(s) 448, 1687, 1747
BspLI GGNNCC 4 cut(s) 136, 1199, 1953, 1983
BspMI ACCTGC 1 cut(s) 329
BspOI GCTAGC 1 cut(s) 1811
BspPI GGATC 2 cut(s) 1752, 1921
BspT107I GGYRCC 1 cut(s) 1981
BspTNI GGTCTC 1 cut(s) 1394
BsrDI GCAATG 2 cut(s) 1029, 1700
BsrI ACTGG 3 cut(s) 1300, 1387, 1606
BssECI CCNNGG 3 cut(s) 15, 1265, 1620
BssMI GATC 8 cut(s) 263, 586, 721, 1644, 1712, 1726, 1744, 1913
BssT1I CCWWGG 2 cut(s) 1265, 1620
Bst2UI CCWGG 1 cut(s) 17
Bst4CI ACNGT 1 cut(s) 72
Bst6I CTCTTC 2 cut(s) 568, 1890
BstAPI GCANNNNNTGC 1 cut(s) 1343
BstC8I GCNNGC 3 cut(s) 538, 1738, 1809
BstDEI CTNAG 3 cut(s) 627, 1776, 1842
BstDSI CCRYGG 2 cut(s) 1265, 1620
BstENI CCTNNNNNAGG 1 cut(s) 1896
BstF5I GGATG 6 cut(s) 25, 475, 757, 976, 1494, 1589
BstHHI GCGC 1 cut(s) 1813
BstKTI GATC 8 cut(s) 266, 589, 724, 1647, 1715, 1729, 1747, 1916
BstMAI GTCTC 1 cut(s) 1394
BstMBI GATC 8 cut(s) 263, 586, 721, 1644, 1712, 1726, 1744, 1913
BstMWI GCNNNNNNNGC 2 cut(s) 1343, 1810
BstNI CCWGG 1 cut(s) 17
BstSCI CCNGG 1 cut(s) 15
BstSLI GKGCMC 2 cut(s) 1348, 1641
BstV1I GCAGC 3 cut(s) 222, 1656, 1846
BstV2I GAAGAC 5 cut(s) 36, 69, 207, 1134, 1619
BstX2I RGATCY 1 cut(s) 263
BstXI CCANNNNNNTGG 2 cut(s) 466, 1621
BstYI RGATCY 1 cut(s) 263
BsuRI GGCC 3 cut(s) 135, 1605, 1902
BtgI CCRYGG 2 cut(s) 1265, 1620
BtrI CACGTC 2 cut(s) 551, 1174
BtsCI GGATG 6 cut(s) 25, 475, 757, 976, 1494, 1589
BtsIMutI CAGTG 3 cut(s) 217, 459, 938
BveI ACCTGC 1 cut(s) 329
Cac8I GCNNGC 3 cut(s) 538, 1738, 1809
CciI TCATGA 3 cut(s) 448, 1687, 1747
CfoI GCGC 1 cut(s) 1813
Cfr13I GGNCC 3 cut(s) 134, 1603, 1754
Csp6I GTAC 5 cut(s) 813, 832, 1152, 1216, 1792
CspCI CAANNNNNGTGG 2 cut(s) 751, 786
CviQI GTAC 5 cut(s) 813, 832, 1152, 1216, 1792
DdeI CTNAG 3 cut(s) 627, 1776, 1842
DpnI GATC 8 cut(s) 265, 588, 723, 1646, 1714, 1728, 1746, 1915
DpnII GATC 8 cut(s) 263, 586, 721, 1644, 1712, 1726, 1744, 1913
DraI TTTAAA 2 cut(s) 1507, 1677
DriI GACNNNNNGTC 1 cut(s) 70
Eam1104I CTCTTC 2 cut(s) 568, 1890
Eam1105I GACNNNNNGTC 1 cut(s) 70
EarI CTCTTC 2 cut(s) 568, 1890
Eco130I CCWWGG 2 cut(s) 1265, 1620
Eco24I GRGCYC 2 cut(s) 15, 940
Eco31I GGTCTC 1 cut(s) 1394
Eco47I GGWCC 1 cut(s) 1754
Eco57I CTGAAG 2 cut(s) 30, 426
EcoNI CCTNNNNNAGG 1 cut(s) 1896
EcoO109I RGGNCCY 1 cut(s) 134
EcoRI GAATTC 2 cut(s) 161, 349
EcoRII CCWGG 1 cut(s) 15
EcoT14I CCWWGG 2 cut(s) 1265, 1620
EcoT22I ATGCAT 1 cut(s) 1064
EcoT38I GRGCYC 2 cut(s) 15, 940
ErhI CCWWGG 2 cut(s) 1265, 1620
FaqI GGGAC 1 cut(s) 1184
FauI CCCGC 1 cut(s) 1941
FauNDI CATATG 1 cut(s) 1064
FbaI TGATCA 3 cut(s) 721, 1644, 1726
Fnu4HI GCNGC 4 cut(s) 236, 1670, 1805, 1835
FokI GGATG 6 cut(s) 32, 462, 744, 963, 1481, 1576
FriOI GRGCYC 2 cut(s) 15, 940
Fsp4HI GCNGC 4 cut(s) 236, 1670, 1805, 1835
FspBI CTAG 7 cut(s) 87, 267, 593, 647, 1332, 1808, 1935
GlaI GCGC 1 cut(s) 1812
GluI GCNGC 4 cut(s) 236, 1670, 1805, 1835
GsaI CCCAGC 1 cut(s) 27
HaeIII GGCC 3 cut(s) 135, 1605, 1902
HapII CCGG 1 cut(s) 1907
HhaI GCGC 1 cut(s) 1813
Hin6I GCGC 1 cut(s) 1811
HinP1I GCGC 1 cut(s) 1811
HincII GTYRAC 2 cut(s) 777, 1179
HindII GTYRAC 2 cut(s) 777, 1179
HindIII AAGCTT 3 cut(s) 1191, 1487, 1738
HinfI GANTC 8 cut(s) 152, 529, 643, 739, 1045, 1353, 1684, 1846
HpaII CCGG 1 cut(s) 1907
HphI GGTGA 2 cut(s) 71, 1525
Hpy166II GTNNAC 5 cut(s) 495, 777, 1179, 1346, 1639
Hpy188I TCNGA 7 cut(s) 49, 157, 366, 1041, 1683, 1777, 1845
Hpy8I GTNNAC 5 cut(s) 495, 777, 1179, 1346, 1639
Hpy99I CGWCG 2 cut(s) 181, 492
HpyCH4III ACNGT 1 cut(s) 72
HpyCH4IV ACGT 4 cut(s) 246, 550, 1173, 1181
HpyF10VI GCNNNNNNNGC 2 cut(s) 1343, 1810
HpyF3I CTNAG 3 cut(s) 627, 1776, 1842
HpySE526I ACGT 4 cut(s) 246, 550, 1173, 1181
HspAI GCGC 1 cut(s) 1811
Ksp22I TGATCA 3 cut(s) 721, 1644, 1726
Kzo9I GATC 8 cut(s) 263, 586, 721, 1644, 1712, 1726, 1744, 1913
Lsp1109I GCAGC 3 cut(s) 222, 1656, 1846
LweI GCATC 5 cut(s) 10, 828, 1108, 1503, 1865
MaeI CTAG 7 cut(s) 87, 267, 593, 647, 1332, 1808, 1935
MaeII ACGT 4 cut(s) 246, 550, 1173, 1181
MaeIII GTNAC 4 cut(s) 242, 438, 1324, 1548
MalI GATC 8 cut(s) 265, 588, 723, 1646, 1714, 1728, 1746, 1915
MboI GATC 8 cut(s) 263, 586, 721, 1644, 1712, 1726, 1744, 1913
MflI RGATCY 1 cut(s) 263
MhlI GDGCHC 4 cut(s) 15, 940, 1348, 1641
MlyI GAGTC 4 cut(s) 538, 652, 733, 1039
Mph1103I ATGCAT 1 cut(s) 1064
MroXI GAANNNNTTC 1 cut(s) 1470
MslI CAYNNNNRTG 3 cut(s) 447, 464, 1594
MspA1I CMGCKG 1 cut(s) 404
MspI CCGG 1 cut(s) 1907
MspR9I CCNGG 1 cut(s) 17
MvaI CCWGG 1 cut(s) 17
MwoI GCNNNNNNNGC 2 cut(s) 1343, 1810
NcoI CCATGG 2 cut(s) 1265, 1620
NdeI CATATG 1 cut(s) 1064
NdeII GATC 8 cut(s) 263, 586, 721, 1644, 1712, 1726, 1744, 1913
NheI GCTAGC 1 cut(s) 1807
NlaIV GGNNCC 4 cut(s) 136, 1199, 1953, 1983
NsiI ATGCAT 1 cut(s) 1064
PagI TCATGA 3 cut(s) 448, 1687, 1747
PdmI GAANNNNTTC 1 cut(s) 1470
PfeI GAWTC 4 cut(s) 152, 1353, 1684, 1846
PflFI GACNNNGTC 1 cut(s) 206
PkrI GCNGC 4 cut(s) 237, 1671, 1806, 1836
PleI GAGTC 4 cut(s) 537, 651, 733, 1039
PpsI GAGTC 4 cut(s) 537, 651, 733, 1039
PshBI ATTAAT 1 cut(s) 1518
PsiI TTATAA 2 cut(s) 819, 992
Psp1406I AACGTT 1 cut(s) 1181
Psp6I CCWGG 1 cut(s) 15
PspFI CCCAGC 1 cut(s) 23
PspGI CCWGG 1 cut(s) 15
PspN4I GGNNCC 4 cut(s) 136, 1199, 1953, 1983
PspPI GGNCC 3 cut(s) 134, 1603, 1754
PsuI RGATCY 1 cut(s) 263
PsyI GACNNNGTC 1 cut(s) 206
PvuII CAGCTG 1 cut(s) 404
RsaI GTAC 5 cut(s) 814, 833, 1153, 1217, 1793
RsaNI GTAC 5 cut(s) 813, 832, 1152, 1216, 1792
RseI CAYNNNNRTG 3 cut(s) 447, 464, 1594
SatI GCNGC 4 cut(s) 236, 1670, 1805, 1835
Sau3AI GATC 8 cut(s) 263, 586, 721, 1644, 1712, 1726, 1744, 1913
Sau96I GGNCC 3 cut(s) 134, 1603, 1754
SchI GAGTC 4 cut(s) 538, 652, 733, 1039
ScrFI CCNGG 1 cut(s) 17
SduI GDGCHC 4 cut(s) 15, 940, 1348, 1641
SfaNI GCATC 5 cut(s) 10, 828, 1108, 1503, 1865
SinI GGWCC 1 cut(s) 1754
SmiMI CAYNNNNRTG 3 cut(s) 447, 464, 1594
SmlI CTYRAG 2 cut(s) 332, 848
SmoI CTYRAG 2 cut(s) 332, 848
SsiI CCGC 2 cut(s) 1805, 1948
SspI AATATT 4 cut(s) 1084, 1411, 1562, 1660
SspMI CTAG 7 cut(s) 87, 267, 593, 647, 1332, 1808, 1935
StyD4I CCNGG 1 cut(s) 15
StyI CCWWGG 2 cut(s) 1265, 1620
TaaI ACNGT 1 cut(s) 72
TaiI ACGT 4 cut(s) 249, 553, 1176, 1184
TaqI TCGA 9 cut(s) 176, 196, 316, 423, 532, 571, 659, 866, 1987
TatI WGTACW 3 cut(s) 812, 831, 1215
TauI GCSGC 1 cut(s) 1807
TfiI GAWTC 4 cut(s) 152, 1353, 1684, 1846
TscAI CASTG 3 cut(s) 217, 466, 938
TseI GCWGC 3 cut(s) 235, 1669, 1834
TspDTI ATGAA 9 cut(s) 174, 892, 1031, 1203, 1578, 1670, 1676, 1764, 1947
TspGWI ACGGA 1 cut(s) 1382
TspRI CASTG 3 cut(s) 217, 466, 938
Tth111I GACNNNGTC 1 cut(s) 206
VneI GTGCAC 2 cut(s) 1344, 1637
VpaK11BI GGWCC 1 cut(s) 1754
VspI ATTAAT 1 cut(s) 1518
XagI CCTNNNNNAGG 1 cut(s) 1896
XapI RAATTY 7 cut(s) 33, 161, 182, 349, 555, 1302, 1470
XbaI TCTAGA 2 cut(s) 266, 1331
XmnI GAANNNNTTC 1 cut(s) 1470
XspI CTAG 7 cut(s) 87, 267, 593, 647, 1332, 1808, 1935
Zsp2I ATGCAT 1 cut(s) 1064
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.