Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0000143

Physical Location & Seq

Genomic Coordinates Forward (+)

20359883 .. 20373164

Gene Structure 13282 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG095300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1554 bp

ATGGATCCCAACGAGACCGCGCAGCAGCTTCTTGCCCTTCATGCTAGAATTGTGGGAAACATGGAGTCAGAGACTATGGTCTCTACCACAGATCAACGTGTTGAAGAAGAGCCACAGTACACACATATTGACCAGAATGAATTCTCACAGAGAAGGCACAAGAAGCAGGAGGAGGAGGAGATTGTCATATGTGAATGCAAGTATGATGAAAAGGATCCTGAAAGTGCATGTGGAGAAAGGTGCTTGAATGTGTTGACCAGCACGGAATGCACTCCTGGATATTGCCCTTGTGGTGTCTATTGTAAGAATCAGAGATTTCAGAAATGTGAATATGCCAAGACAAAATTGTTTAAAACAGAAGGCCGTGGTTGGGGTCTTTTAGCCAATGAGAACATTAAGGCAGGGAAGTTTATTATTGAATACTGTGGAGAAGTGATATCATGGAAGGAAGCAAAGAAAAGATCTCATGCTTATGAAGTTGAAGGTATCAGGGATGCATTTATTATTTCTCTCAATGCCTCTGAGTCTATTGATGCCACTGTGAAGGGAAGCCTAGCAAGATTTATAAATCATTCTTGCCAACCAAATTGTGAGACAAGAAAGTGGAATGTGCTGGGGGAAATTAGGGTTGGAATATTTGCAAAACAAGATATATTAGCTGGAACTGAGTTGGCATATGACTACAATTTTGAATGGTATGGGGGTGTGAAGGTTCGCTGCCTCTGTGGTGCACCCAGCTGTTCAGGATTTCTTGGGGCAAAATCTCGTGGTTTTCAGGAGGATACATACTTGTGGGAAGATGACGATGAAAGGTATTCAGTTGAGAAAATTCCGCTTTATGATTCGGCAGAGGATGAGCCTTCTTCTATGCTCTTCAAGACTGTCAAATCAAATTCTGAATTTGATGTAAAAGGGATGATGATCAATGTCAATGCTGATTCTGAACATCAGTTGATGTCCACTGCTCTAGTTGTCCAATCACTTGATTCAGATCCAATGGAGGGTGTAGTTATGGAGGTAAAAAGTGAAGCGAGTGAGGCGACGAAACTTTTTTCACGAGGTAATCAACCTGCTTTCTTAAAAAAGAATGCAATGATATCTCGAATCCGTAGCAATACTGCGTGTCGAAACTATCACATTGGATCAGGATCAATTTCAAACAAGAGATCGAAACAAGGTTCTAGTGGAAAGTTGAAACATTATGCACAAAAGCAAGTCGATGCCAAATCTGTAGCTTTGCTTTTAGCATCAAATGAGGCACAGGATGAAATTTTGAAACATGAGGAGATGAGAAGTGATGCTGCCACTCATCTTGAATCTTTATACAATGAGATACGACCTGCCATTGAAGAACATGAAAGGGACAGCCAAGACAGTGTAGCAACCAGTGTAGCTGAGAAGTGGATAGAAGCCTGCTGCTTGAAACTGAAGACGGAATTCGACCTTTATTCCTCTATTGTTAAACAAGTTGCTTGTACCCCTCGAAAGGCAAGTGGCCAAACCAAATCTGCCGATAACAACATAGAGAATGAAATCAAGTTGCTCCCAAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006325 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008213 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009791 GO:0009987 GO:0010224 GO:0010228 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0019538 GO:0022414 GO:0032259 GO:0032501 GO:0032502 GO:0033554 GO:0034641 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046483 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051276 GO:0051716 GO:0061458 GO:0071704 GO:0071840 GO:0090304 GO:1901360 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00310 map00310

Pfam Domains

Protein Families

SET

Protein Analysis

517

Amino Acids

58.15

Weight (kDa)

5.37

Isoelectric Point (pI)

55.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AWS	PF17907	72 - 109	1.5e-14	AWS domain
SET	PF00856	123 - 229	2.8e-25	SET domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000143)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76710 AT1G76710 AT1G76710 AT1G76710
fragaria_vesca	FvH4_1g20063 FvH4_2g15231 FvH4_3g04011 FvH4_3g28681 FvH4_4g01411 FvH4_4g10181 FvH4_4g15922 FvH4_4g16651 FvH4_4g16652 FvH4_5g13892 FvH4_5g13893 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g25511 FvH4_6g12551 FvH4_6g12552 FvH4_6g38841 FvH4_7g04391
malus_domestica	MD05G1031300.v1.1 MD05G1031400.v1.1 MD05G1031500.v1.1 MD08G1164400.v1.1 MD10G1032900.v1.1 MD10G1033000.v1.1 MD10G1033100.v1.1
prunus_persica	Prupe.3G240700_v2.0.a1 Prupe.7G144600_v2.0.a1 Prupe.8G038500_v2.0.a1 Prupe.8G038500_v2.0.a1
pyrus_communis	pycom05g02250 pycom05g02260 pycom05g02270 pycom05g02280 pycom08g14160 pycom10g02100 pycom10g02110 pycom10g02130
rosa_chinensis	RchiOBHm_Chr1g0329481 RchiOBHm_Chr1g0329491 RchiOBHm_Chr1g0341531 RchiOBHm_Chr3g0464811 RchiOBHm_Chr3g0494701 RchiOBHm_Chr3g0497501 RchiOBHm_Chr4g0385841 RchiOBHm_Chr5g0061181 RchiOBHm_Chr6g0263001 RchiOBHm_Chr7g0193111 RchiOBHm_Chr7g0206281 RchiOBHm_Chr7g0206311
rosa_laevigata	RLG00000018908 RLG00000028528 RLG00000028803 RLG00000029882 RLG00000029883 RLG00000030361
rosa_multiflora	Rmu_co8196328.1_g000001 Rmu_co8259135.1_g000001 Rmu_co8269185.1_g000001 Rmu_sc0000076.1_g000019 Rmu_sc0000311.1_g000007 Rmu_sc0000429.1_g000038 Rmu_sc0000429.1_g000039 Rmu_sc0000429.1_g000040 Rmu_sc0000511.1_g000005 Rmu_sc0000539.1_g000054 Rmu_sc0000566.1_g000039 Rmu_sc0000805.1_g000032 Rmu_sc0000870.1_g000073 Rmu_sc0000870.1_g000074 Rmu_sc0001010.1_g000018 Rmu_sc0001083.1_g000013 Rmu_sc0001114.1_g000011 Rmu_sc0001702.1_g000027 Rmu_sc0001779.1_g000012 Rmu_sc0002923.1_g000036 Rmu_sc0003242.1_g000011 Rmu_sc0003291.1_g000036 Rmu_sc0003393.1_g000012 Rmu_sc0003872.1_g000016 Rmu_sc0003872.1_g000017 Rmu_sc0003872.1_g000018 Rmu_sc0004084.1_g000020 Rmu_sc0004386.1_g000005 Rmu_sc0004622.1_g000005 Rmu_sc0004742.1_g000021 Rmu_sc0004755.1_g000020 Rmu_sc0004805.1_g000036 Rmu_sc0005065.1_g000006 Rmu_sc0005177.1_g000004 Rmu_sc0006373.1_g000003 Rmu_sc0006373.1_g000004 Rmu_sc0007121.1_g000002 Rmu_sc0007943.1_g000003 Rmu_sc0010368.1_g000006 Rmu_sc0010543.1_g000001 Rmu_sc0012591.1_g000006 Rmu_sc0013504.1_g000009 Rmu_sc0015025.1_g000001 Rmu_sc0016170.1_g000001 Rmu_sc0017156.1_g000001 Rmu_sc0026439.1_g000001
rosa_roxburghii	Rroxscaffold_175G00432280 Rroxscaffold_1G00030190 Rroxscaffold_1G00030880 Rroxscaffold_2G00090520 Rroxscaffold_3G00227940 Rroxscaffold_3G00233400 Rroxscaffold_3G00238500 Rroxscaffold_3G00251650 Rroxscaffold_4G00301570 Rroxscaffold_4G00321040 Rroxscaffold_5G00350880 Rroxscaffold_7G00184400
rosa_rugosa	Rorug01G0080800 Rorug01G0080900 Rorug01G0193900 Rorug02G0275900 Rorug02G0275900 Rorug02G0275900 Rorug02G0305400 Rorug02G0311800 Rorug02G0350400 Rorug02G0381300 Rorug03G0136700 Rorug03G0181900 Rorug03G0268000 Rorug04G0301600 Rorug05G0175100 Rorug05G0250700 Rorug05G0298200 Rorug05G0596000 Rorug06G0029500 Rorug07G0094300 Rorug07G0094300 Rorug07G0095400 Rorug07G0140100
rosa_samantha	Rh1AG099200 Rh1AG190500 Rh1BG078900 Rh1BG079000 Rh1BG079100 Rh1CG084600 Rh1CG084700 Rh1CG095300 Rh1CG175900 Rh1DG103300 Rh1DG150400 Rh2AG079300 Rh2AG272400 Rh2AG464800 Rh2AG507400 Rh2DG078300 Rh2DG078400 Rh3CG206900 Rh3CG295400 Rh3DG206800 Rh3DG356200 Rh4CG071500 Rh4CG179200 Rh4DG064700 Rh5CG362400 Rh7AG212300 Rh7AG226200 Rh7BG222200
rosa_wichuraiana	Rw0G009990 Rw0G011260 Rw0G011270 Rw0G012910 Rw0G013740 Rw1G007740 Rw1G013050 Rw1G014230 Rw2G014270 Rw3G012720 Rw3G028110 Rw4G006630 Rw4G015270 Rw4G016160 Rw4G031380 Rw5G011440 Rw5G029180 Rw5G048360 Rw5G048430 Rw5G048780 Rw6G005250 Rw6G006390 Rw7G002840 Rw7G014080 Rw7G019650 Rw7G032790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	566
Acc36I	ACCTGC	2 cut(s)	1078, 1348
AccII	CGCG	1 cut(s)	20
AciI	CCGC	2 cut(s)	18, 833
AclWI	GGATC	6 cut(s)	12, 209, 222, 986, 1150, 1156
AcoI	YGGCCR	1 cut(s)	1495
AcsI	RAATTY	6 cut(s)	140, 828, 892, 899, 1269, 1436
AcuI	CTGAAG	1 cut(s)	1448
AfaI	GTAC	2 cut(s)	119, 1477
AfiI	CCNNNNNNNGG	3 cut(s)	370, 1001, 1486
AflIII	ACRYGT	1 cut(s)	97
AjnI	CCWGG	1 cut(s)	274
AjuI	GAANNNNNNNTTGG	2 cut(s)	612, 644
AluBI	AGCT	5 cut(s)	28, 659, 738, 1235, 1394
AluI	AGCT	5 cut(s)	28, 659, 738, 1235, 1394
Alw21I	GWGCWC	1 cut(s)	733
Alw26I	GTCTC	4 cut(s)	8, 65, 85, 587
Alw44I	GTGCAC	1 cut(s)	729
AlwI	GGATC	6 cut(s)	12, 209, 222, 986, 1150, 1156
AoxI	GGCC	2 cut(s)	361, 1495
ApaLI	GTGCAC	1 cut(s)	729
ApeKI	GCWGC	5 cut(s)	22, 25, 717, 1301, 1416
ApoI	RAATTY	6 cut(s)	140, 828, 892, 899, 1269, 1436
ArsI	GACNNNNNNTTYG	2 cut(s)	671, 703
Asp700I	GAANNNNTTC	1 cut(s)	140
AspLEI	GCGC	1 cut(s)	22
BaeGI	GKGCMC	1 cut(s)	733
BalI	TGGCCA	1 cut(s)	1497
BamHI	GGATCC	2 cut(s)	4, 214
BauI	CACGAG	2 cut(s)	765, 1056
BbsI	GAAGAC	1 cut(s)	1436
Bbv12I	GWGCWC	1 cut(s)	733
BbvI	GCAGC	5 cut(s)	34, 37, 704, 1288, 1403
BceAI	ACGGC	1 cut(s)	348
BciT130I	CCWGG	1 cut(s)	276
BciVI	GTATCC	1 cut(s)	775
BclI	TGATCA	1 cut(s)	921
BcoDI	GTCTC	4 cut(s)	8, 65, 85, 587
BfaI	CTAG	4 cut(s)	45, 554, 968, 1182
BfmI	CTRYAG	1 cut(s)	1230
BfuAI	ACCTGC	2 cut(s)	1078, 1348
BfuI	GTATCC	1 cut(s)	775
BglII	AGATCT	1 cut(s)	461
BisI	GCNGC	5 cut(s)	23, 26, 718, 1302, 1417
BlsI	GCNGC	5 cut(s)	24, 27, 719, 1303, 1418
Bme1390I	CCNGG	1 cut(s)	276
BmiI	GGNNCC	2 cut(s)	6, 216
BmrFI	CCNGG	1 cut(s)	276
BmsI	GCATC	5 cut(s)	484, 523, 1210, 1256, 1288
BoxI	GACNNNNGTC	1 cut(s)	77
BpiI	GAAGAC	1 cut(s)	1436
BsaBI	GATNNNNATC	3 cut(s)	920, 990, 1147
BsaI	GGTCTC	2 cut(s)	8, 85
BsaJI	CCNNGG	1 cut(s)	364
Bsc4I	CCNNNNNNNGG	3 cut(s)	370, 1001, 1486
Bse1I	ACTGG	1 cut(s)	1386
Bse3DI	GCAATG	1 cut(s)	1098
Bse8I	GATNNNNATC	3 cut(s)	920, 990, 1147
BseBI	CCWGG	1 cut(s)	276
BseDI	CCNNGG	1 cut(s)	364
BseGI	GGATG	4 cut(s)	499, 859, 921, 1270
BseJI	GATNNNNATC	3 cut(s)	920, 990, 1147
BseLI	CCNNNNNNNGG	3 cut(s)	370, 1001, 1486
BseMI	GCAATG	1 cut(s)	1098
BseMII	CTCAG	3 cut(s)	513, 657, 1386
BseNI	ACTGG	1 cut(s)	1386
BseRI	GAGGAG	4 cut(s)	185, 188, 191, 1298
BseSI	GKGCMC	1 cut(s)	733
BseXI	GCAGC	5 cut(s)	34, 37, 704, 1288, 1403
BseYI	CCCAGC	2 cut(s)	613, 734
Bsh1236I	CGCG	1 cut(s)	20
BshFI	GGCC	2 cut(s)	363, 1497
BsiHKAI	GWGCWC	1 cut(s)	733
BslFI	GGGAC	1 cut(s)	1376
BslI	CCNNNNNNNGG	3 cut(s)	370, 1001, 1486
BsmAI	GTCTC	4 cut(s)	8, 65, 85, 587
BsmFI	GGGAC	1 cut(s)	1376
BsmI	GAATGC	3 cut(s)	200, 272, 1093
BsnI	GGCC	2 cut(s)	363, 1497
Bso31I	GGTCTC	2 cut(s)	8, 85
Bsp1286I	GDGCHC	1 cut(s)	733
Bsp143I	GATC	9 cut(s)	4, 91, 214, 461, 921, 991, 1142, 1148, 1166
BspACI	CCGC	2 cut(s)	18, 833
BspANI	GGCC	2 cut(s)	363, 1497
BspCNI	CTCAG	3 cut(s)	514, 658, 1387
BspFNI	CGCG	1 cut(s)	20
BspLI	GGNNCC	2 cut(s)	6, 216
BspMI	ACCTGC	2 cut(s)	1078, 1348
BspPI	GGATC	6 cut(s)	12, 209, 222, 986, 1150, 1156
BspQI	GCTCTTC	2 cut(s)	102, 878
BspTNI	GGTCTC	2 cut(s)	8, 85
BsrDI	GCAATG	1 cut(s)	1098
BsrI	ACTGG	1 cut(s)	1386
BssECI	CCNNGG	1 cut(s)	364
BssMI	GATC	9 cut(s)	4, 91, 214, 461, 921, 991, 1142, 1148, 1166
BssSI	CACGAG	2 cut(s)	765, 1056
Bst2BI	CACGAG	2 cut(s)	765, 1056
Bst2UI	CCWGG	1 cut(s)	276
Bst4CI	ACNGT	5 cut(s)	117, 425, 541, 883, 1376
Bst6I	CTCTTC	2 cut(s)	102, 878
BstAPI	GCANNNNNTGC	1 cut(s)	267
BstC8I	GCNNGC	1 cut(s)	1414
BstDEI	CTNAG	3 cut(s)	522, 666, 1395
BstDSI	CCRYGG	1 cut(s)	364
BstF5I	GGATG	4 cut(s)	499, 859, 921, 1270
BstFNI	CGCG	1 cut(s)	20
BstHHI	GCGC	1 cut(s)	22
BstKTI	GATC	9 cut(s)	7, 94, 217, 464, 924, 994, 1145, 1151, 1169
BstMAI	GTCTC	4 cut(s)	8, 65, 85, 587
BstMBI	GATC	9 cut(s)	4, 91, 214, 461, 921, 991, 1142, 1148, 1166
BstMWI	GCNNNNNNNGC	4 cut(s)	41, 163, 267, 1037
BstNI	CCWGG	1 cut(s)	276
BstNSI	RCATGY	1 cut(s)	231
BstPAI	GACNNNNGTC	1 cut(s)	77
BstSCI	CCNGG	1 cut(s)	274
BstSFI	CTRYAG	1 cut(s)	1230
BstSLI	GKGCMC	1 cut(s)	733
BstUI	CGCG	1 cut(s)	20
BstV1I	GCAGC	5 cut(s)	34, 37, 704, 1288, 1403
BstV2I	GAAGAC	1 cut(s)	1436
BstX2I	RGATCY	4 cut(s)	4, 214, 461, 991
BstYI	RGATCY	4 cut(s)	4, 214, 461, 991
BsuI	GTATCC	1 cut(s)	775
BsuRI	GGCC	2 cut(s)	363, 1497
BtgI	CCRYGG	1 cut(s)	364
BtsCI	GGATG	4 cut(s)	499, 859, 921, 1270
BtsI	GCAGTG	1 cut(s)	960
BtsIMutI	CAGTG	4 cut(s)	537, 960, 1381, 1393
BveI	ACCTGC	2 cut(s)	1078, 1348
Cac8I	GCNNGC	1 cut(s)	1414
CfoI	GCGC	1 cut(s)	22
Csp6I	GTAC	2 cut(s)	118, 1476
CspCI	CAANNNNNGTGG	2 cut(s)	1294, 1329
CviAII	CATG	7 cut(s)	41, 61, 228, 441, 467, 1280, 1355
CviQI	GTAC	2 cut(s)	118, 1476
DdeI	CTNAG	3 cut(s)	522, 666, 1395
DpnI	GATC	9 cut(s)	6, 93, 216, 463, 923, 993, 1144, 1150, 1168
DpnII	GATC	9 cut(s)	4, 91, 214, 461, 921, 991, 1142, 1148, 1166
DraI	TTTAAA	1 cut(s)	352
EaeI	YGGCCR	1 cut(s)	1495
Eam1104I	CTCTTC	2 cut(s)	102, 878
EarI	CTCTTC	2 cut(s)	102, 878
Eco31I	GGTCTC	2 cut(s)	8, 85
Eco32I	GATATC	2 cut(s)	438, 1098
Eco57I	CTGAAG	1 cut(s)	1448
EcoRI	GAATTC	2 cut(s)	140, 1436
EcoRII	CCWGG	1 cut(s)	274
EcoRV	GATATC	2 cut(s)	438, 1098
EcoT22I	ATGCAT	1 cut(s)	499
FaeI	CATG	7 cut(s)	44, 64, 231, 444, 470, 1283, 1358
FaqI	GGGAC	1 cut(s)	1376
FatI	CATG	7 cut(s)	40, 60, 227, 440, 466, 1279, 1354
FauNDI	CATATG	2 cut(s)	188, 676
FbaI	TGATCA	1 cut(s)	921
Fnu4HI	GCNGC	5 cut(s)	23, 26, 718, 1302, 1417
FokI	GGATG	4 cut(s)	506, 866, 928, 1277
Fsp4HI	GCNGC	5 cut(s)	23, 26, 718, 1302, 1417
FspBI	CTAG	4 cut(s)	45, 554, 968, 1182
GlaI	GCGC	1 cut(s)	21
GluI	GCNGC	5 cut(s)	23, 26, 718, 1302, 1417
GsaI	CCCAGC	2 cut(s)	617, 738
HaeIII	GGCC	2 cut(s)	363, 1497
HhaI	GCGC	1 cut(s)	22
Hin1II	CATG	7 cut(s)	44, 64, 231, 444, 470, 1283, 1358
Hin6I	GCGC	1 cut(s)	20
HinP1I	GCGC	1 cut(s)	20
HincII	GTYRAC	1 cut(s)	255
HindII	GTYRAC	1 cut(s)	255
HinfI	GANTC	8 cut(s)	65, 307, 524, 842, 938, 986, 1104, 1316
Hpy166II	GTNNAC	4 cut(s)	120, 255, 731, 960
Hpy188I	TCNGA	7 cut(s)	70, 312, 321, 523, 898, 943, 991
Hpy188III	TCNNGA	8 cut(s)	218, 744, 776, 877, 1056, 1101, 1146, 1313
Hpy8I	GTNNAC	4 cut(s)	120, 255, 731, 960
Hpy99I	CGWCG	1 cut(s)	1045
HpyAV	CCTTC	8 cut(s)	47, 147, 353, 439, 476, 538, 703, 870
HpyCH4III	ACNGT	5 cut(s)	117, 425, 541, 883, 1376
HpyCH4IV	ACGT	1 cut(s)	97
HpyCH4V	TGCA	8 cut(s)	198, 227, 270, 497, 641, 731, 1091, 1205
HpyF10VI	GCNNNNNNNGC	4 cut(s)	41, 163, 267, 1037
HpyF3I	CTNAG	3 cut(s)	522, 666, 1395
HpySE526I	ACGT	1 cut(s)	97
Hsp92II	CATG	7 cut(s)	44, 64, 231, 444, 470, 1283, 1358
HspAI	GCGC	1 cut(s)	20
Ksp22I	TGATCA	1 cut(s)	921
Kzo9I	GATC	9 cut(s)	4, 91, 214, 461, 921, 991, 1142, 1148, 1166
LguI	GCTCTTC	2 cut(s)	102, 878
LmnI	GCTCC	1 cut(s)	1548
Lsp1109I	GCAGC	5 cut(s)	34, 37, 704, 1288, 1403
LweI	GCATC	5 cut(s)	484, 523, 1210, 1256, 1288
MaeI	CTAG	4 cut(s)	45, 554, 968, 1182
MaeII	ACGT	1 cut(s)	97
MalI	GATC	9 cut(s)	6, 93, 216, 463, 923, 993, 1144, 1150, 1168
MboI	GATC	9 cut(s)	4, 91, 214, 461, 921, 991, 1142, 1148, 1166
MboII	GAAGA	7 cut(s)	116, 119, 809, 855, 865, 1361, 1441
MflI	RGATCY	4 cut(s)	4, 214, 461, 991
MhlI	GDGCHC	1 cut(s)	733
MlsI	TGGCCA	1 cut(s)	1497
MluNI	TGGCCA	1 cut(s)	1497
MlyI	GAGTC	2 cut(s)	74, 533
MmeI	TCCRAC	1 cut(s)	610
Mox20I	TGGCCA	1 cut(s)	1497
Mph1103I	ATGCAT	1 cut(s)	499
MroXI	GAANNNNTTC	1 cut(s)	140
MscI	TGGCCA	1 cut(s)	1497
MseI	TTAA	4 cut(s)	351, 396, 1079, 1461
MslI	CAYNNNNRTG	2 cut(s)	471, 790
Msp20I	TGGCCA	1 cut(s)	1497
MspA1I	CMGCKG	1 cut(s)	738
MspR9I	CCNGG	1 cut(s)	276
Mva1269I	GAATGC	3 cut(s)	200, 272, 1093
MvaI	CCWGG	1 cut(s)	276
MvnI	CGCG	1 cut(s)	20
MwoI	GCNNNNNNNGC	4 cut(s)	41, 163, 267, 1037
NdeI	CATATG	2 cut(s)	188, 676
NdeII	GATC	9 cut(s)	4, 91, 214, 461, 921, 991, 1142, 1148, 1166
NlaIII	CATG	7 cut(s)	44, 64, 231, 444, 470, 1283, 1358
NlaIV	GGNNCC	2 cut(s)	6, 216
NsiI	ATGCAT	1 cut(s)	499
NspI	RCATGY	1 cut(s)	231
PciSI	GCTCTTC	2 cut(s)	102, 878
PctI	GAATGC	3 cut(s)	200, 272, 1093
PdmI	GAANNNNTTC	1 cut(s)	140
PfeI	GAWTC	6 cut(s)	307, 842, 938, 986, 1104, 1316
PfoI	TCCNGGA	1 cut(s)	274
PkrI	GCNGC	5 cut(s)	24, 27, 719, 1303, 1418
PleI	GAGTC	2 cut(s)	73, 532
PpsI	GAGTC	2 cut(s)	73, 532
PshAI	GACNNNNGTC	1 cut(s)	77
PsiI	TTATAA	1 cut(s)	566
Psp6I	CCWGG	1 cut(s)	274
PspFI	CCCAGC	2 cut(s)	613, 734
PspGI	CCWGG	1 cut(s)	274
PspN4I	GGNNCC	2 cut(s)	6, 216
PsuI	RGATCY	4 cut(s)	4, 214, 461, 991
PvuII	CAGCTG	1 cut(s)	738
RsaI	GTAC	2 cut(s)	119, 1477
RsaNI	GTAC	2 cut(s)	118, 1476
RseI	CAYNNNNRTG	2 cut(s)	471, 790
SapI	GCTCTTC	2 cut(s)	102, 878
SaqAI	TTAA	4 cut(s)	351, 396, 1079, 1461
SatI	GCNGC	5 cut(s)	23, 26, 718, 1302, 1417
Sau3AI	GATC	9 cut(s)	4, 91, 214, 461, 921, 991, 1142, 1148, 1166
SchI	GAGTC	2 cut(s)	74, 533
ScrFI	CCNGG	1 cut(s)	276
SduI	GDGCHC	1 cut(s)	733
SfaNI	GCATC	5 cut(s)	484, 523, 1210, 1256, 1288
SfcI	CTRYAG	1 cut(s)	1230
SmiMI	CAYNNNNRTG	2 cut(s)	471, 790
SsiI	CCGC	2 cut(s)	18, 833
SspI	AATATT	1 cut(s)	636
SspMI	CTAG	4 cut(s)	45, 554, 968, 1182
StyD4I	CCNGG	1 cut(s)	274
TaaI	ACNGT	5 cut(s)	117, 425, 541, 883, 1376
TaiI	ACGT	1 cut(s)	100
TaqI	TCGA	6 cut(s)	1102, 1126, 1169, 1218, 1440, 1483
TatI	WGTACW	1 cut(s)	117
TfiI	GAWTC	6 cut(s)	307, 842, 938, 986, 1104, 1316
Tru1I	TTAA	4 cut(s)	351, 396, 1079, 1461
Tru9I	TTAA	4 cut(s)	351, 396, 1079, 1461
TscAI	CASTG	4 cut(s)	544, 967, 1381, 1393
TseI	GCWGC	5 cut(s)	22, 25, 717, 1301, 1416
TspDTI	ATGAA	8 cut(s)	29, 153, 222, 489, 822, 1281, 1371, 1545
TspGWI	ACGGA	3 cut(s)	278, 1097, 1448
TspRI	CASTG	4 cut(s)	544, 967, 1381, 1393
VneI	GTGCAC	1 cut(s)	729
XapI	RAATTY	6 cut(s)	140, 828, 892, 899, 1269, 1436
XceI	RCATGY	1 cut(s)	231
XmnI	GAANNNNTTC	1 cut(s)	140
XspI	CTAG	4 cut(s)	45, 554, 968, 1182
Zsp2I	ATGCAT	1 cut(s)	499

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.