Rorug02G0311800

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000143
Physical Location & Seq
Reverse (-)
37566728 .. 37570999
4272 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0311800.1

Sequence Viewer

Length: 2034 bp
ATGGATGAGGAGGATAGTACAGCAGAGAAAATGGCGTCGTCTTTGATCATTCCAGAGAAGCCGATGCACAGGCCTGGTGGTTGTGTTGGTATTTTCTTTCAGCTCTTCGATTGGAAACGCAGGTTCGCCAAGAAAAAGCTCTTCTCCCAGAAACTGCTTCCTCCATCTCGTGCGAAACAACTACTCAACAAGTTTGGAGATGACAAGATGCCCATTTCTAAGCTTCATTTGATAGCTGATGAGAATGGTGGGAACCTGAAGAAAAATTTAAATTATTCTTGTGCTTCTGGTCAAAAGCATGAGCTTCGAGCTCCAGGTTTGGTTGCTAGGCTAATGGGTCTTGAATACATGCCTGCGGCCCATGAGAAGCCTCACAATACTCAAGTTACTCATGCTTGTGATGGTCGACAGAAGGAAAAAATCAAGAACCAAAATGTTTCTGATAGACAAGAGCTTTTGGAAAAAGGAGAAGCAAAGCCTGAATCAAGGCCTCAAAAGCTTCAGAAAATGGGACTCTATGATAGAACAGCAGTGACTAGGTTTGGAGCTGAGTCACTTCAAGTCAAGAGTGTTTTGCCAAGATCGAGAAAGCATCATCAGCACCAGAAGCTTGCTTCTCCAGTCAAGAGTTCAAAGATCTCCTCTGGTAAGACTGCCTCTCGAACCTCTCGGTTGATTGGTGCTGCTACTAAAATCTTGGATCCCGGACTGCAGTCTACGAATAGAGCCAAATGTGCTCTCATCAGCTCTTTTCATCATCCTCAAGCGGAAGCAACCCTGGCTCAATCACCAGACGTATCTAAGAAGACACACTATGATGCTGGTAAGGGCAACTCTCCGAAGGGGCAGACCTGTTGCAAAGAGTGTGGTAATTTGCTACATGTTCCAGACTTAACATCTAGAGTGGAGGAACAACAACATGTTTTCCCATCCTATGCTTCAAATATTACTAATTCCTGTTCTCTGTTAGCAGAACAAAGTAGGCCATCCATATCCTCCTTTGCGGTAGCAAAGGATTCAATCTTTCAGAGAACAAGAGACCAACCTTTATCAGTTTCTGGTCAAAAGAACATTAGAACCCATGGCAAACCTTTTAAGGAAAGAAAGGCTCCGTCTCCTGAAGGTCAAGCTTCATGCCAATTGTCAAGTCAACCATATAAGCCTCACAGATATCAGATGCAGCACCCAATGTCACTAGGGAAGGAAAGAATTCCACCCAGATATAAACTAAATAATCTGGATAGCAGAAGAGCCTCACCGGCTGCAAATGCTGTTGGAGGGACCAAAGACTTCATTGACTTGAACCGAAGTCTAAGCAATCGTACCTGCCCGATGGTGCCTACCAAAGGGAAAGAGTCAAAGTTTGAGAGAGAAAGGAAAGCATTTATTGGGAAGGATGATTCCCCATTCCAGTTAAGAGCCTCAATAAGAAAGAGGAGGATGATCCATGTCAGTGGACAAGTTACAAATACAGGTATTGTTACTTCAACTACCACAATACAAAGGAACACTCAGTTTGGTGCACCAGCAGGGAATGGATTAGGAAATGGTACCGACTTAATGAGCCAGACTTGTGCTAATAGTGAATTAGCTGATAAACAAGATGGTAACAGAGCTTATGGAAATACAGACACTGATGTCATGTCATTCACATTTAATTCCCCTATAACGAGCAAGACTGGAATATCGGCAGAAATGGAGGGTACGGGCAGGGACAATGATGGAAAGATCTATTTCCAAAAACCATTGTCATTGAGTGGAGATGCTATTGGTGTCTTTCTAGAACAAAAGTTGAGGGAGCTAGCTTGTCTTGAAGATGATGACTTGGCGATAGGTGCTTCATCCAAGAGATCCACTGCTATGATTCATGATGGCCACATTTCGAGTTATTCTCAGAAAATCTTTACAGCCAAAGGGAAGCCAAAGAAGTCGGCTGGAACATCTCTTGATGGTGATCATCTGAGCCCTGGGTCTGTTCTTGAAGCTTCATTCTCTTCTAGTAGTATGGATGATAGCTCAGGTCTGCAATTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AFT FAR1 MULE

Protein Analysis

677

Amino Acids

74.23

Weight (kDa)

9.64

Isoelectric Point (pI)

51.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VARLMGL PF14383 98 - 121 3.9e-11 DUF761-associated sequence motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000143)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G76710 AT1G76710 AT1G76710 AT1G76710
fragaria_vesca FvH4_1g20063 FvH4_2g15231 FvH4_3g04011 FvH4_3g28681 FvH4_4g01411 FvH4_4g10181 FvH4_4g15922 FvH4_4g16651 FvH4_4g16652 FvH4_5g13892 FvH4_5g13893 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g25511 FvH4_6g12551 FvH4_6g12552 FvH4_6g38841 FvH4_7g04391
malus_domestica MD05G1031300.v1.1 MD05G1031400.v1.1 MD05G1031500.v1.1 MD08G1164400.v1.1 MD10G1032900.v1.1 MD10G1033000.v1.1 MD10G1033100.v1.1
prunus_persica Prupe.3G240700_v2.0.a1 Prupe.7G144600_v2.0.a1 Prupe.8G038500_v2.0.a1 Prupe.8G038500_v2.0.a1
pyrus_communis pycom05g02250 pycom05g02260 pycom05g02270 pycom05g02280 pycom08g14160 pycom10g02100 pycom10g02110 pycom10g02130
rosa_chinensis RchiOBHm_Chr1g0329481 RchiOBHm_Chr1g0329491 RchiOBHm_Chr1g0341531 RchiOBHm_Chr3g0464811 RchiOBHm_Chr3g0494701 RchiOBHm_Chr3g0497501 RchiOBHm_Chr4g0385841 RchiOBHm_Chr5g0061181 RchiOBHm_Chr6g0263001 RchiOBHm_Chr7g0193111 RchiOBHm_Chr7g0206281 RchiOBHm_Chr7g0206311
rosa_laevigata RLG00000018908 RLG00000028528 RLG00000028803 RLG00000029882 RLG00000029883 RLG00000030361
rosa_multiflora Rmu_co8196328.1_g000001 Rmu_co8259135.1_g000001 Rmu_co8269185.1_g000001 Rmu_sc0000076.1_g000019 Rmu_sc0000311.1_g000007 Rmu_sc0000429.1_g000038 Rmu_sc0000429.1_g000039 Rmu_sc0000429.1_g000040 Rmu_sc0000511.1_g000005 Rmu_sc0000539.1_g000054 Rmu_sc0000566.1_g000039 Rmu_sc0000805.1_g000032 Rmu_sc0000870.1_g000073 Rmu_sc0000870.1_g000074 Rmu_sc0001010.1_g000018 Rmu_sc0001083.1_g000013 Rmu_sc0001114.1_g000011 Rmu_sc0001702.1_g000027 Rmu_sc0001779.1_g000012 Rmu_sc0002923.1_g000036 Rmu_sc0003242.1_g000011 Rmu_sc0003291.1_g000036 Rmu_sc0003393.1_g000012 Rmu_sc0003872.1_g000016 Rmu_sc0003872.1_g000017 Rmu_sc0003872.1_g000018 Rmu_sc0004084.1_g000020 Rmu_sc0004386.1_g000005 Rmu_sc0004622.1_g000005 Rmu_sc0004742.1_g000021 Rmu_sc0004755.1_g000020 Rmu_sc0004805.1_g000036 Rmu_sc0005065.1_g000006 Rmu_sc0005177.1_g000004 Rmu_sc0006373.1_g000003 Rmu_sc0006373.1_g000004 Rmu_sc0007121.1_g000002 Rmu_sc0007943.1_g000003 Rmu_sc0010368.1_g000006 Rmu_sc0010543.1_g000001 Rmu_sc0012591.1_g000006 Rmu_sc0013504.1_g000009 Rmu_sc0015025.1_g000001 Rmu_sc0016170.1_g000001 Rmu_sc0017156.1_g000001 Rmu_sc0026439.1_g000001
rosa_roxburghii Rroxscaffold_175G00432280 Rroxscaffold_1G00030190 Rroxscaffold_1G00030880 Rroxscaffold_2G00090520 Rroxscaffold_3G00227940 Rroxscaffold_3G00233400 Rroxscaffold_3G00238500 Rroxscaffold_3G00251650 Rroxscaffold_4G00301570 Rroxscaffold_4G00321040 Rroxscaffold_5G00350880 Rroxscaffold_7G00184400
rosa_rugosa Rorug01G0080800 Rorug01G0080900 Rorug01G0193900 Rorug02G0275900 Rorug02G0275900 Rorug02G0275900 Rorug02G0305400 Rorug02G0311800 Rorug02G0350400 Rorug02G0381300 Rorug03G0136700 Rorug03G0181900 Rorug03G0268000 Rorug04G0301600 Rorug05G0175100 Rorug05G0250700 Rorug05G0298200 Rorug05G0596000 Rorug06G0029500 Rorug07G0094300 Rorug07G0094300 Rorug07G0095400 Rorug07G0140100
rosa_samantha Rh1AG099200 Rh1AG190500 Rh1BG078900 Rh1BG079000 Rh1BG079100 Rh1CG084600 Rh1CG084700 Rh1CG095300 Rh1CG175900 Rh1DG103300 Rh1DG150400 Rh2AG079300 Rh2AG272400 Rh2AG464800 Rh2AG507400 Rh2DG078300 Rh2DG078400 Rh3CG206900 Rh3CG295400 Rh3DG206800 Rh3DG356200 Rh4CG071500 Rh4CG179200 Rh4DG064700 Rh5CG362400 Rh7AG212300 Rh7AG226200 Rh7BG222200
rosa_wichuraiana Rw0G009990 Rw0G011260 Rw0G011270 Rw0G012910 Rw0G013740 Rw1G007740 Rw1G013050 Rw1G014230 Rw2G014270 Rw3G012720 Rw3G028110 Rw4G006630 Rw4G015270 Rw4G016160 Rw4G031380 Rw5G011440 Rw5G029180 Rw5G048360 Rw5G048430 Rw5G048780 Rw6G005250 Rw6G006390 Rw7G002840 Rw7G014080 Rw7G019650 Rw7G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2032
AasI GACNNNNNNGTC 1 cut(s) 1637
Acc36I ACCTGC 2 cut(s) 111, 1334
Acc65I GGTACC 1 cut(s) 1550
AccB1I GGYRCC 2 cut(s) 1336, 1550
AccI GTMKAC 2 cut(s) 406, 716
AciI CCGC 3 cut(s) 356, 767, 1004
AclWI GGATC 4 cut(s) 695, 708, 1438, 1845
AcoI YGGCCR 1 cut(s) 1873
AcsI RAATTY 2 cut(s) 265, 1209
AcuI CTGAAG 3 cut(s) 278, 485, 1140
AcyI GRCGYC 1 cut(s) 35
AfaI GTAC 4 cut(s) 19, 1324, 1552, 1705
AfiI CCNNNNNNNGG 1 cut(s) 1346
AflIII ACRYGT 2 cut(s) 880, 919
AgsI TTSAA 9 cut(s) 344, 560, 633, 942, 1020, 1303, 1488, 1814, 1982
AjnI CCWGG 4 cut(s) 73, 313, 777, 1966
Alw21I GWGCWC 3 cut(s) 313, 739, 1525
Alw26I GTCTC 2 cut(s) 1032, 1119
Alw44I GTGCAC 1 cut(s) 1521
AlwI GGATC 4 cut(s) 695, 708, 1438, 1845
AlwNI CAGNNNCTG 3 cut(s) 154, 1058, 1634
AoxI GGCC 5 cut(s) 71, 357, 488, 983, 1873
ApaLI GTGCAC 1 cut(s) 1521
ApeKI GCWGC 3 cut(s) 683, 1180, 1262
ApoI RAATTY 2 cut(s) 265, 1209
Asp700I GAANNNNTTC 1 cut(s) 1209
Asp718I GGTACC 1 cut(s) 1550
AspS9I GGNCC 2 cut(s) 358, 1281
AsuC2I CCSGG 1 cut(s) 705
AsuHPI GGTGA 3 cut(s) 780, 1248, 1964
AsuNHI GCTAGC 1 cut(s) 1801
AvaII GGWCC 1 cut(s) 1281
BaeGI GKGCMC 1 cut(s) 1525
BalI TGGCCA 1 cut(s) 1875
BamHI GGATCC 1 cut(s) 700
BanI GGYRCC 2 cut(s) 1336, 1550
BanII GRGCYC 2 cut(s) 313, 1967
BarI GAAGNNNNNNTAC 2 cut(s) 1468, 1500
BauI CACGAG 1 cut(s) 168
BbsI GAAGAC 1 cut(s) 812
Bbv12I GWGCWC 3 cut(s) 313, 739, 1525
BbvI GCAGC 3 cut(s) 670, 1192, 1249
BccI CCATC 9 cut(s) 172, 395, 937, 994, 1327, 1598, 1715, 1865, 1943
BcgI CGANNNNNNTGC 2 cut(s) 287, 321
BciT130I CCWGG 4 cut(s) 75, 315, 779, 1968
BclI TGATCA 2 cut(s) 45, 1954
BcnI CCSGG 1 cut(s) 705
BcoDI GTCTC 2 cut(s) 1032, 1119
BfaI CTAG 7 cut(s) 327, 537, 900, 1196, 1781, 1802, 1998
BfmI CTRYAG 1 cut(s) 710
BfuAI ACCTGC 2 cut(s) 111, 1334
BglI GCCNNNNNGGC 1 cut(s) 1259
BglII AGATCT 2 cut(s) 636, 1728
BisI GCNGC 4 cut(s) 357, 684, 1181, 1263
BlsI GCNGC 4 cut(s) 358, 685, 1182, 1264
Bme1390I CCNGG 5 cut(s) 75, 315, 705, 779, 1968
Bme18I GGWCC 1 cut(s) 1281
BmgT120I GGNCC 2 cut(s) 358, 1281
BmiI GGNNCC 6 cut(s) 254, 702, 1110, 1282, 1338, 1552
BmrFI CCNGG 5 cut(s) 75, 315, 705, 779, 1968
BmsI GCATC 6 cut(s) 54, 198, 601, 808, 1167, 1753
BmtI GCTAGC 1 cut(s) 1805
BoxI GACNNNNGTC 1 cut(s) 712
BpiI GAAGAC 1 cut(s) 812
BplI GAGNNNNNCTC 2 cut(s) 1876, 1908
BpmI CTGGAG 2 cut(s) 297, 603
Bpu10I CCTNAGC 1 cut(s) 2017
BpuEI CTTGAG 2 cut(s) 366, 747
BpuMI CCSGG 1 cut(s) 705
BsaBI GATNNNNATC 1 cut(s) 1953
BsaHI GRCGYC 1 cut(s) 35
BsaI GGTCTC 1 cut(s) 1032
BsaJI CCNNGG 4 cut(s) 777, 1081, 1966, 1967
Bsc4I CCNNNNNNNGG 1 cut(s) 1346
Bse118I RCCGGY 1 cut(s) 1258
Bse1I ACTGG 3 cut(s) 620, 1411, 1684
Bse8I GATNNNNATC 1 cut(s) 1953
BseBI CCWGG 4 cut(s) 75, 315, 779, 1968
BseDI CCNNGG 4 cut(s) 777, 1081, 1966, 1967
BseGI GGATG 8 cut(s) 10, 757, 929, 986, 1402, 1446, 1841, 2014
BseJI GATNNNNATC 1 cut(s) 1953
BseLI CCNNNNNNNGG 1 cut(s) 1346
BseMII CTCAG 5 cut(s) 540, 1526, 1907, 1952, 2031
BseNI ACTGG 3 cut(s) 620, 1411, 1684
BseRI GAGGAG 3 cut(s) 23, 631, 1450
BseSI GKGCMC 1 cut(s) 1525
BseXI GCAGC 3 cut(s) 670, 1192, 1249
BshFI GGCC 5 cut(s) 73, 359, 490, 985, 1875
BshNI GGYRCC 2 cut(s) 1336, 1550
BsiHKAI GWGCWC 3 cut(s) 313, 739, 1525
BsiSI CCGG 2 cut(s) 705, 1259
BslFI GGGAC 3 cut(s) 525, 1294, 1727
BslI CCNNNNNNNGG 1 cut(s) 1346
BsmAI GTCTC 2 cut(s) 1032, 1119
BsmBI CGTCTC 1 cut(s) 1119
BsmFI GGGAC 3 cut(s) 525, 1294, 1727
BsnI GGCC 5 cut(s) 73, 359, 490, 985, 1875
Bso31I GGTCTC 1 cut(s) 1032
Bsp1286I GDGCHC 4 cut(s) 313, 739, 1525, 1967
Bsp143I GATC 8 cut(s) 45, 581, 636, 700, 1443, 1728, 1850, 1954
Bsp19I CCATGG 1 cut(s) 1081
BspACI CCGC 3 cut(s) 356, 767, 1004
BspANI GGCC 5 cut(s) 73, 359, 490, 985, 1875
BspCNI CTCAG 5 cut(s) 541, 1525, 1906, 1953, 2030
BspHI TCATGA 1 cut(s) 1867
BspLI GGNNCC 6 cut(s) 254, 702, 1110, 1282, 1338, 1552
BspMAI CTGCAG 1 cut(s) 714
BspMI ACCTGC 2 cut(s) 111, 1334
BspOI GCTAGC 1 cut(s) 1805
BspPI GGATC 4 cut(s) 695, 708, 1438, 1845
BspQI GCTCTTC 3 cut(s) 110, 146, 1243
BspT107I GGYRCC 2 cut(s) 1336, 1550
BspTNI GGTCTC 1 cut(s) 1032
BsrFI RCCGGY 1 cut(s) 1258
BsrI ACTGG 3 cut(s) 620, 1411, 1684
BssAI RCCGGY 1 cut(s) 1258
BssECI CCNNGG 4 cut(s) 777, 1081, 1966, 1967
BssMI GATC 8 cut(s) 45, 581, 636, 700, 1443, 1728, 1850, 1954
BssNI GRCGYC 1 cut(s) 35
BssSI CACGAG 1 cut(s) 168
BssT1I CCWWGG 1 cut(s) 1081
Bst2BI CACGAG 1 cut(s) 168
Bst2UI CCWGG 4 cut(s) 75, 315, 779, 1968
Bst6I CTCTTC 4 cut(s) 110, 146, 1243, 1999
BstACI GRCGYC 1 cut(s) 35
BstC8I GCNNGC 3 cut(s) 354, 612, 1803
BstDEI CTNAG 8 cut(s) 219, 549, 801, 1313, 1512, 1893, 1961, 2017
BstDSI CCRYGG 1 cut(s) 1081
BstENI CCTNNNNNAGG 1 cut(s) 1344
BstF5I GGATG 8 cut(s) 10, 757, 929, 986, 1402, 1446, 1841, 2014
BstKTI GATC 8 cut(s) 48, 584, 639, 703, 1446, 1731, 1853, 1957
BstMAI GTCTC 2 cut(s) 1032, 1119
BstMBI GATC 8 cut(s) 45, 581, 636, 700, 1443, 1728, 1850, 1954
BstMWI GCNNNNNNNGC 8 cut(s) 496, 598, 607, 734, 779, 1259, 1268, 1835
BstNI CCWGG 4 cut(s) 75, 315, 779, 1968
BstNSI RCATGY 3 cut(s) 352, 884, 923
BstPAI GACNNNNGTC 1 cut(s) 712
BstSCI CCNGG 5 cut(s) 73, 313, 703, 777, 1966
BstSFI CTRYAG 1 cut(s) 710
BstSLI GKGCMC 1 cut(s) 1525
BstV1I GCAGC 3 cut(s) 670, 1192, 1249
BstV2I GAAGAC 1 cut(s) 812
BstX2I RGATCY 4 cut(s) 636, 700, 1728, 1850
BstXI CCANNNNNNTGG 1 cut(s) 1454
BstYI RGATCY 4 cut(s) 636, 700, 1728, 1850
BsuRI GGCC 5 cut(s) 73, 359, 490, 985, 1875
BtgI CCRYGG 1 cut(s) 1081
BtsCI GGATG 8 cut(s) 10, 757, 929, 986, 1402, 1446, 1841, 2014
BtsI GCAGTG 2 cut(s) 537, 1854
BtsIMutI CAGTG 4 cut(s) 537, 1459, 1632, 1854
BveI ACCTGC 2 cut(s) 111, 1334
Cac8I GCNNGC 3 cut(s) 354, 612, 1803
CaiI CAGNNNCTG 3 cut(s) 154, 1058, 1634
CciI TCATGA 1 cut(s) 1867
Cfr10I RCCGGY 1 cut(s) 1258
Cfr13I GGNCC 2 cut(s) 358, 1281
CseI GACGC 1 cut(s) 24
Csp6I GTAC 4 cut(s) 18, 1323, 1551, 1704
CspCI CAANNNNNGTGG 2 cut(s) 847, 882
CviQI GTAC 4 cut(s) 18, 1323, 1551, 1704
DdeI CTNAG 8 cut(s) 219, 549, 801, 1313, 1512, 1893, 1961, 2017
DpnI GATC 8 cut(s) 47, 583, 638, 702, 1445, 1730, 1852, 1956
DpnII GATC 8 cut(s) 45, 581, 636, 700, 1443, 1728, 1850, 1954
DraI TTTAAA 1 cut(s) 270
DrdI GACNNNNNNGTC 1 cut(s) 1637
DseDI GACNNNNNNGTC 1 cut(s) 1637
EaeI YGGCCR 1 cut(s) 1873
Eam1104I CTCTTC 4 cut(s) 110, 146, 1243, 1999
EarI CTCTTC 4 cut(s) 110, 146, 1243, 1999
Ecl136II GAGCTC 1 cut(s) 311
Eco130I CCWWGG 1 cut(s) 1081
Eco147I AGGCCT 2 cut(s) 73, 490
Eco24I GRGCYC 2 cut(s) 313, 1967
Eco31I GGTCTC 1 cut(s) 1032
Eco32I GATATC 1 cut(s) 1172
Eco47I GGWCC 1 cut(s) 1281
Eco53kI GAGCTC 1 cut(s) 311
Eco57I CTGAAG 3 cut(s) 278, 485, 1140
EcoICRI GAGCTC 1 cut(s) 311
EcoNI CCTNNNNNAGG 1 cut(s) 1344
EcoRI GAATTC 1 cut(s) 1209
EcoRII CCWGG 4 cut(s) 73, 313, 777, 1966
EcoRV GATATC 1 cut(s) 1172
EcoT14I CCWWGG 1 cut(s) 1081
EcoT38I GRGCYC 2 cut(s) 313, 1967
ErhI CCWWGG 1 cut(s) 1081
Esp3I CGTCTC 1 cut(s) 1119
FaqI GGGAC 3 cut(s) 525, 1294, 1727
FbaI TGATCA 2 cut(s) 45, 1954
FblI GTMKAC 2 cut(s) 406, 716
Fnu4HI GCNGC 4 cut(s) 357, 684, 1181, 1263
FokI GGATG 8 cut(s) 17, 744, 916, 973, 1409, 1453, 1828, 2021
FriOI GRGCYC 2 cut(s) 313, 1967
Fsp4HI GCNGC 4 cut(s) 357, 684, 1181, 1263
FspBI CTAG 7 cut(s) 327, 537, 900, 1196, 1781, 1802, 1998
GluI GCNGC 4 cut(s) 357, 684, 1181, 1263
GsuI CTGGAG 2 cut(s) 297, 603
HaeIII GGCC 5 cut(s) 73, 359, 490, 985, 1875
HapII CCGG 2 cut(s) 705, 1259
HgaI GACGC 1 cut(s) 24
Hin1I GRCGYC 1 cut(s) 35
HincII GTYRAC 2 cut(s) 407, 1151
HindII GTYRAC 2 cut(s) 407, 1151
HindIII AAGCTT 5 cut(s) 221, 497, 608, 1128, 1983
HinfI GANTC 7 cut(s) 482, 513, 551, 1016, 1355, 1400, 1864
HpaII CCGG 2 cut(s) 705, 1259
HphI GGTGA 3 cut(s) 780, 1248, 1964
Hpy166II GTNNAC 5 cut(s) 407, 717, 1151, 1457, 1523
Hpy188I TCNGA 7 cut(s) 442, 504, 840, 1029, 1176, 1896, 1962
Hpy8I GTNNAC 5 cut(s) 407, 717, 1151, 1457, 1523
Hpy99I CGWCG 1 cut(s) 40
HpyAV CCTTC 5 cut(s) 406, 835, 1115, 1195, 1387
HpyCH4IV ACGT 1 cut(s) 795
HpyCH4V TGCA 7 cut(s) 67, 712, 858, 1180, 1265, 1523, 2026
HpyF10VI GCNNNNNNNGC 8 cut(s) 496, 598, 607, 734, 779, 1259, 1268, 1835
HpyF3I CTNAG 8 cut(s) 219, 549, 801, 1313, 1512, 1893, 1961, 2017
HpySE526I ACGT 1 cut(s) 795
Hsp92I GRCGYC 1 cut(s) 35
KpnI GGTACC 1 cut(s) 1554
Ksp22I TGATCA 2 cut(s) 45, 1954
Kzo9I GATC 8 cut(s) 45, 581, 636, 700, 1443, 1728, 1850, 1954
LguI GCTCTTC 3 cut(s) 110, 146, 1243
LmnI GCTCC 4 cut(s) 316, 545, 1114, 1798
Lsp1109I GCAGC 3 cut(s) 670, 1192, 1249
LweI GCATC 6 cut(s) 54, 198, 601, 808, 1167, 1753
MaeI CTAG 7 cut(s) 327, 537, 900, 1196, 1781, 1802, 1998
MaeII ACGT 1 cut(s) 795
MaeIII GTNAC 7 cut(s) 385, 532, 552, 1191, 1462, 1480, 1607
MalI GATC 8 cut(s) 47, 583, 638, 702, 1445, 1730, 1852, 1956
MboI GATC 8 cut(s) 45, 581, 636, 700, 1443, 1728, 1850, 1954
MboII GAAGA 7 cut(s) 97, 133, 271, 817, 1260, 1826, 1986
MfeI CAATTG 1 cut(s) 1139
MflI RGATCY 4 cut(s) 636, 700, 1728, 1850
MhlI GDGCHC 4 cut(s) 313, 739, 1525, 1967
MlsI TGGCCA 1 cut(s) 1875
MluCI AATT 9 cut(s) 265, 271, 871, 952, 1139, 1209, 1586, 1657, 2027
MluNI TGGCCA 1 cut(s) 1875
MlyI GAGTC 3 cut(s) 507, 560, 1364
MmeI TCCRAC 1 cut(s) 1255
Mox20I TGGCCA 1 cut(s) 1875
MroXI GAANNNNTTC 1 cut(s) 1209
MscI TGGCCA 1 cut(s) 1875
MseI TTAA 6 cut(s) 269, 893, 1095, 1415, 1559, 1656
MslI CAYNNNNRTG 4 cut(s) 396, 816, 1452, 1859
Msp20I TGGCCA 1 cut(s) 1875
MspI CCGG 2 cut(s) 705, 1259
MspR9I CCNGG 5 cut(s) 75, 315, 705, 779, 1968
MunI CAATTG 1 cut(s) 1139
MvaI CCWGG 4 cut(s) 75, 315, 779, 1968
MwoI GCNNNNNNNGC 8 cut(s) 496, 598, 607, 734, 779, 1259, 1268, 1835
NciI CCSGG 1 cut(s) 705
NcoI CCATGG 1 cut(s) 1081
NdeII GATC 8 cut(s) 45, 581, 636, 700, 1443, 1728, 1850, 1954
NheI GCTAGC 1 cut(s) 1801
NlaIV GGNNCC 6 cut(s) 254, 702, 1110, 1282, 1338, 1552
NmuCI GTSAC 3 cut(s) 532, 552, 1191
NspI RCATGY 3 cut(s) 352, 884, 923
PagI TCATGA 1 cut(s) 1867
PasI CCCWGGG 1 cut(s) 1967
PceI AGGCCT 2 cut(s) 73, 490
PciI ACATGT 2 cut(s) 880, 919
PciSI GCTCTTC 3 cut(s) 110, 146, 1243
PdmI GAANNNNTTC 1 cut(s) 1209
PfeI GAWTC 4 cut(s) 482, 1016, 1400, 1864
PfoI TCCNGGA 1 cut(s) 703
PkrI GCNGC 4 cut(s) 358, 685, 1182, 1264
PleI GAGTC 3 cut(s) 507, 559, 1363
PpsI GAGTC 3 cut(s) 507, 559, 1363
PscI ACATGT 2 cut(s) 880, 919
PshAI GACNNNNGTC 1 cut(s) 712
PsiI TTATAA 1 cut(s) 2032
Psp124BI GAGCTC 1 cut(s) 313
Psp6I CCWGG 4 cut(s) 73, 313, 777, 1966
PspGI CCWGG 4 cut(s) 73, 313, 777, 1966
PspN4I GGNNCC 6 cut(s) 254, 702, 1110, 1282, 1338, 1552
PspPI GGNCC 2 cut(s) 358, 1281
PstI CTGCAG 1 cut(s) 714
PstNI CAGNNNCTG 3 cut(s) 154, 1058, 1634
PsuI RGATCY 4 cut(s) 636, 700, 1728, 1850
RsaI GTAC 4 cut(s) 19, 1324, 1552, 1705
RsaNI GTAC 4 cut(s) 18, 1323, 1551, 1704
RseI CAYNNNNRTG 4 cut(s) 396, 816, 1452, 1859
SacI GAGCTC 1 cut(s) 313
SalI GTCGAC 1 cut(s) 405
SapI GCTCTTC 3 cut(s) 110, 146, 1243
SaqAI TTAA 6 cut(s) 269, 893, 1095, 1415, 1559, 1656
SatI GCNGC 4 cut(s) 357, 684, 1181, 1263
Sau3AI GATC 8 cut(s) 45, 581, 636, 700, 1443, 1728, 1850, 1954
Sau96I GGNCC 2 cut(s) 358, 1281
SchI GAGTC 3 cut(s) 507, 560, 1364
ScrFI CCNGG 5 cut(s) 75, 315, 705, 779, 1968
SduI GDGCHC 4 cut(s) 313, 739, 1525, 1967
SfaNI GCATC 6 cut(s) 54, 198, 601, 808, 1167, 1753
SfcI CTRYAG 1 cut(s) 710
SinI GGWCC 1 cut(s) 1281
SmiI ATTTAAAT 1 cut(s) 270
SmiMI CAYNNNNRTG 4 cut(s) 396, 816, 1452, 1859
SmlI CTYRAG 2 cut(s) 381, 762
SmoI CTYRAG 2 cut(s) 381, 762
Sse9I AATT 9 cut(s) 265, 271, 871, 952, 1139, 1209, 1586, 1657, 2027
SseBI AGGCCT 2 cut(s) 73, 490
SsiI CCGC 3 cut(s) 356, 767, 1004
SspI AATATT 1 cut(s) 946
SspMI CTAG 7 cut(s) 327, 537, 900, 1196, 1781, 1802, 1998
SstI GAGCTC 1 cut(s) 313
StuI AGGCCT 2 cut(s) 73, 490
StyD4I CCNGG 5 cut(s) 73, 313, 703, 777, 1966
StyI CCWWGG 1 cut(s) 1081
SwaI ATTTAAAT 1 cut(s) 270
TaiI ACGT 1 cut(s) 798
TaqI TCGA 6 cut(s) 108, 307, 406, 584, 661, 1883
TasI AATT 9 cut(s) 265, 271, 871, 952, 1139, 1209, 1586, 1657, 2027
TatI WGTACW 1 cut(s) 17
TauI GCSGC 1 cut(s) 359
TfiI GAWTC 4 cut(s) 482, 1016, 1400, 1864
Tru1I TTAA 6 cut(s) 269, 893, 1095, 1415, 1559, 1656
Tru9I TTAA 6 cut(s) 269, 893, 1095, 1415, 1559, 1656
TscAI CASTG 4 cut(s) 537, 1459, 1639, 1861
TseFI GTSAC 3 cut(s) 532, 552, 1191
TseI GCWGC 3 cut(s) 683, 1180, 1262
Tsp45I GTSAC 3 cut(s) 532, 552, 1191
TspDTI ATGAA 7 cut(s) 215, 743, 1122, 1282, 1830, 1856, 1977
TspGWI ACGGA 1 cut(s) 1101
TspRI CASTG 4 cut(s) 537, 1459, 1639, 1861
VneI GTGCAC 1 cut(s) 1521
VpaK11BI GGWCC 1 cut(s) 1281
XagI CCTNNNNNAGG 1 cut(s) 1344
XapI RAATTY 2 cut(s) 265, 1209
XbaI TCTAGA 2 cut(s) 899, 1780
XceI RCATGY 3 cut(s) 352, 884, 923
XmiI GTMKAC 2 cut(s) 406, 716
XmnI GAANNNNTTC 1 cut(s) 1209
XspI CTAG 7 cut(s) 327, 537, 900, 1196, 1781, 1802, 1998
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.