Rmu_sc0002923.1_g000036

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002923.1
OG0000143
Physical Location & Seq
Forward (+)
157781 .. 163012
5232 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002923.1_g000036.1.cds

Sequence Viewer

Length: 2007 bp
atgctcgaaatcaatggcacaaatccggggctagctttcgcgatgtcgcctgagcctagctcgctccggttgctgtcgttcttgaggaagaagcaggtgccgccggagaacatgtgcacgaatccgcaacggaaggggatctccaccggtgattgccatgtggaaagagatcggaagaacaatatggtgattatcattcgaaggtctgattccggaaatgtcgggaataaaaaaaaaagaccaaaaataaagttttgttgcgagtgtggtggtgactacaagcgtgttttaaagcttgatgctcaaaactcttatgaaaagagtcagaaacaaactgatggagatagtactcaaaagaaaaggcgtcctaaggctagtggtacgaagaaatgcgagtgtccattcgcattgagggggattaacattgctggggatgaatggacattggaagttatatgtggtgtacataaccatcctccttctcaatcccttcatggtcactcatatgccggacgcttatctaaggaagaacatgcaatgttagtggatatgtcaactagtttgatgaaacccaaggatattcttactgctctcaagaaatgggataaaataacgagtgaaggtgatattatcactgatttgttttggtgtcatccttattgtcttcagattttacgtacctttccacatgtttttatcatggattgcacttacaaaacaaatagatattgttttcctttttttgagattgttggggtgacatctactgagaagaccttcaatgttgcatttgtttatatgtcaagagaggcggaagacaattacacatgggctttgagtagattgaagactcttttgcatgatgactgtattccgggtgttattgtgactgatcgagaattagcactaatgaatagcattagcaaattatttcctggttctcgacatctcctgtgtaaatggcatattaataagaacgtgatgaaagagtgtaagaaaaagtttgcaacaaaagaagggtgggatgcatttaatggtgcttggaacactgttgttagttctacaactgagggtgagtattggaaaaatctcaaggaattggagtctaaatttagtacatatcctaatgaacttcggtatgtgaagagcaactggtttgacaactacaaagaacgatttgtcattgcatggacagatacttgcatgcacatcggtaccactacttcaaatcgggccaaaaatattaaagacttggcatgttgtggttgtactatacgtgttacacatggtttgccatgtgcacatgagattgctgagtacaaacgctctaacaagccaattcctattgacgcgattcacaggcattggagacagttgggtgttgatcagaacatgcatactagtgacactgaagaaaatgttccaataaaacaacatatggttcgattagagaagtgggttgaacaacaaaatgatgaaactagacgagaatttttgataaaaattgatgagctgatgaatccaggcagtacattccttaaagaacctgcagagagagtgaagacaaaagggcgtccacgtaaaattgagactagtactcgacgtttgccatctgcatgggagattgataatgttctttctagtcaggacaataactcactttcacctgcagtttatgaagttggtcaagatgttccccatgctgtggcttcggcaatgggatttggtcgaaaatcttggcgtcgagttcgtggggatttattgaacgagttagatagtatgccacaattgtatgaaaatctctttggtactaaagaggttaagaaggttaaggatgcactaaaccattatagctctgggagcgcacctaaaagatgttggatgtatttcccaaaaatgggggcatttgattgcaacttgttatggtgtggtggtgatcgatttatcagatgggtaatgcataacatttcttcctcttgtggaacaccatactggacgtttcaatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AFT FAR1 MULE

Protein Analysis

668

Amino Acids

76.8

Weight (kDa)

9.07

Isoelectric Point (pI)

53.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000143)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G76710 AT1G76710 AT1G76710 AT1G76710
fragaria_vesca FvH4_1g20063 FvH4_2g15231 FvH4_3g04011 FvH4_3g28681 FvH4_4g01411 FvH4_4g10181 FvH4_4g15922 FvH4_4g16651 FvH4_4g16652 FvH4_5g13892 FvH4_5g13893 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g25511 FvH4_6g12551 FvH4_6g12552 FvH4_6g38841 FvH4_7g04391
malus_domestica MD05G1031300.v1.1 MD05G1031400.v1.1 MD05G1031500.v1.1 MD08G1164400.v1.1 MD10G1032900.v1.1 MD10G1033000.v1.1 MD10G1033100.v1.1
prunus_persica Prupe.3G240700_v2.0.a1 Prupe.7G144600_v2.0.a1 Prupe.8G038500_v2.0.a1 Prupe.8G038500_v2.0.a1
pyrus_communis pycom05g02250 pycom05g02260 pycom05g02270 pycom05g02280 pycom08g14160 pycom10g02100 pycom10g02110 pycom10g02130
rosa_chinensis RchiOBHm_Chr1g0329481 RchiOBHm_Chr1g0329491 RchiOBHm_Chr1g0341531 RchiOBHm_Chr3g0464811 RchiOBHm_Chr3g0494701 RchiOBHm_Chr3g0497501 RchiOBHm_Chr4g0385841 RchiOBHm_Chr5g0061181 RchiOBHm_Chr6g0263001 RchiOBHm_Chr7g0193111 RchiOBHm_Chr7g0206281 RchiOBHm_Chr7g0206311
rosa_laevigata RLG00000018908 RLG00000028528 RLG00000028803 RLG00000029882 RLG00000029883 RLG00000030361
rosa_multiflora Rmu_co8196328.1_g000001 Rmu_co8259135.1_g000001 Rmu_co8269185.1_g000001 Rmu_sc0000076.1_g000019 Rmu_sc0000311.1_g000007 Rmu_sc0000429.1_g000038 Rmu_sc0000429.1_g000039 Rmu_sc0000429.1_g000040 Rmu_sc0000511.1_g000005 Rmu_sc0000539.1_g000054 Rmu_sc0000566.1_g000039 Rmu_sc0000805.1_g000032 Rmu_sc0000870.1_g000073 Rmu_sc0000870.1_g000074 Rmu_sc0001010.1_g000018 Rmu_sc0001083.1_g000013 Rmu_sc0001114.1_g000011 Rmu_sc0001702.1_g000027 Rmu_sc0001779.1_g000012 Rmu_sc0002923.1_g000036 Rmu_sc0003242.1_g000011 Rmu_sc0003291.1_g000036 Rmu_sc0003393.1_g000012 Rmu_sc0003872.1_g000016 Rmu_sc0003872.1_g000017 Rmu_sc0003872.1_g000018 Rmu_sc0004084.1_g000020 Rmu_sc0004386.1_g000005 Rmu_sc0004622.1_g000005 Rmu_sc0004742.1_g000021 Rmu_sc0004755.1_g000020 Rmu_sc0004805.1_g000036 Rmu_sc0005065.1_g000006 Rmu_sc0005177.1_g000004 Rmu_sc0006373.1_g000003 Rmu_sc0006373.1_g000004 Rmu_sc0007121.1_g000002 Rmu_sc0007943.1_g000003 Rmu_sc0010368.1_g000006 Rmu_sc0010543.1_g000001 Rmu_sc0012591.1_g000006 Rmu_sc0013504.1_g000009 Rmu_sc0015025.1_g000001 Rmu_sc0016170.1_g000001 Rmu_sc0017156.1_g000001 Rmu_sc0026439.1_g000001
rosa_roxburghii Rroxscaffold_175G00432280 Rroxscaffold_1G00030190 Rroxscaffold_1G00030880 Rroxscaffold_2G00090520 Rroxscaffold_3G00227940 Rroxscaffold_3G00233400 Rroxscaffold_3G00238500 Rroxscaffold_3G00251650 Rroxscaffold_4G00301570 Rroxscaffold_4G00321040 Rroxscaffold_5G00350880 Rroxscaffold_7G00184400
rosa_rugosa Rorug01G0080800 Rorug01G0080900 Rorug01G0193900 Rorug02G0275900 Rorug02G0275900 Rorug02G0275900 Rorug02G0305400 Rorug02G0311800 Rorug02G0350400 Rorug02G0381300 Rorug03G0136700 Rorug03G0181900 Rorug03G0268000 Rorug04G0301600 Rorug05G0175100 Rorug05G0250700 Rorug05G0298200 Rorug05G0596000 Rorug06G0029500 Rorug07G0094300 Rorug07G0094300 Rorug07G0095400 Rorug07G0140100
rosa_samantha Rh1AG099200 Rh1AG190500 Rh1BG078900 Rh1BG079000 Rh1BG079100 Rh1CG084600 Rh1CG084700 Rh1CG095300 Rh1CG175900 Rh1DG103300 Rh1DG150400 Rh2AG079300 Rh2AG272400 Rh2AG464800 Rh2AG507400 Rh2DG078300 Rh2DG078400 Rh3CG206900 Rh3CG295400 Rh3DG206800 Rh3DG356200 Rh4CG071500 Rh4CG179200 Rh4DG064700 Rh5CG362400 Rh7AG212300 Rh7AG226200 Rh7BG222200
rosa_wichuraiana Rw0G009990 Rw0G011260 Rw0G011270 Rw0G012910 Rw0G013740 Rw1G007740 Rw1G013050 Rw1G014230 Rw2G014270 Rw3G012720 Rw3G028110 Rw4G006630 Rw4G015270 Rw4G016160 Rw4G031380 Rw5G011440 Rw5G029180 Rw5G048360 Rw5G048430 Rw5G048780 Rw6G005250 Rw6G006390 Rw7G002840 Rw7G014080 Rw7G019650 Rw7G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 85, 1675
Acc36I ACCTGC 3 cut(s) 85, 1555, 1675
Acc65I GGTACC 1 cut(s) 1214
AccB1I GGYRCC 2 cut(s) 97, 1214
AccB7I CCANNNNNTGG 1 cut(s) 1705
AccII CGCG 2 cut(s) 41, 1352
AccIII TCCGGA 1 cut(s) 212
AciI CCGC 3 cut(s) 101, 125, 812
AclWI GGATC 1 cut(s) 146
AcsI RAATTY 2 cut(s) 1109, 1490
AcuI CTGAAG 2 cut(s) 650, 1431
AcyI GRCGYC 3 cut(s) 364, 1573, 1741
AfiI CCNNNNNNNGG 3 cut(s) 1705, 1897, 1898
AflIII ACRYGT 3 cut(s) 111, 688, 1276
AgeI ACCGGT 1 cut(s) 146
AgsI TTSAA 6 cut(s) 781, 847, 1227, 1463, 1765, 2003
AhlI ACTAGT 3 cut(s) 557, 1400, 1592
AjnI CCWGG 2 cut(s) 934, 1522
AjuI GAANNNNNNNTTGG 2 cut(s) 1788, 1820
AluBI AGCT 5 cut(s) 35, 60, 295, 1513, 1854
AluI AGCT 5 cut(s) 35, 60, 295, 1513, 1854
Alw21I GWGCWC 2 cut(s) 119, 1303
Alw26I GTCTC 2 cut(s) 1363, 1583
Alw44I GTGCAC 2 cut(s) 115, 1299
AlwI GGATC 1 cut(s) 146
Aor13HI TCCGGA 1 cut(s) 212
AoxI GGCC 1 cut(s) 1233
ApaLI GTGCAC 2 cut(s) 115, 1299
ApoI RAATTY 2 cut(s) 1109, 1490
AseI ATTAAT 1 cut(s) 969
AsiGI ACCGGT 1 cut(s) 146
Asp700I GAANNNNTTC 2 cut(s) 776, 1419
Asp718I GGTACC 1 cut(s) 1214
AspLEI GCGC 1 cut(s) 1865
AspS9I GGNCC 1 cut(s) 1233
AsuC2I CCSGG 2 cut(s) 27, 876
AsuHPI GGTGA 8 cut(s) 161, 199, 284, 635, 769, 1085, 1656, 1946
AsuII TTCGAA 1 cut(s) 199
AsuNHI GCTAGC 1 cut(s) 31
AxyI CCTNAGG 1 cut(s) 369
BaeGI GKGCMC 2 cut(s) 119, 1303
BaeI ACNNNNGTAYC 2 cut(s) 1198, 1231
BanI GGYRCC 2 cut(s) 97, 1214
BarI GAAGNNNNNNTAC 2 cut(s) 1207, 1239
BbsI GAAGAC 5 cut(s) 656, 779, 822, 854, 1568
Bbv12I GWGCWC 2 cut(s) 119, 1303
BccI CCATC 4 cut(s) 332, 480, 1618, 1944
BcgI CGANNNNNNTGC 2 cut(s) 1192, 1226
BciT130I CCWGG 2 cut(s) 936, 1524
BclI TGATCA 1 cut(s) 1384
BcnI CCSGG 2 cut(s) 27, 876
BcoDI GTCTC 2 cut(s) 1363, 1583
BcuI ACTAGT 3 cut(s) 557, 1400, 1592
BfaI CTAG 8 cut(s) 32, 57, 375, 558, 1401, 1482, 1593, 1641
BfmI CTRYAG 2 cut(s) 1548, 1668
BfuAI ACCTGC 3 cut(s) 85, 1555, 1675
BisI GCNGC 1 cut(s) 101
BlsI GCNGC 1 cut(s) 102
BmcAI AGTACT 2 cut(s) 349, 1597
Bme1390I CCNGG 4 cut(s) 27, 876, 936, 1524
BmgT120I GGNCC 1 cut(s) 1233
BmiI GGNNCC 2 cut(s) 99, 1216
BmrFI CCNGG 4 cut(s) 27, 876, 936, 1524
BmsI GCATC 3 cut(s) 289, 1015, 1825
BmtI GCTAGC 1 cut(s) 35
BpiI GAAGAC 5 cut(s) 656, 779, 822, 854, 1568
BplI GAGNNNNNCTC 2 cut(s) 44, 76
Bpu10I CCTNAGC 1 cut(s) 51
Bpu14I TTCGAA 1 cut(s) 199
BpuEI CTTGAG 3 cut(s) 103, 578, 1076
BpuMI CCSGG 2 cut(s) 27, 876
Bsa29I ATCGAT 1 cut(s) 1939
BsaAI YACGTR 3 cut(s) 677, 1277, 1580
BsaHI GRCGYC 3 cut(s) 364, 1573, 1741
BsaJI CCNNGG 2 cut(s) 26, 573
BsaWI WCCGGW 3 cut(s) 66, 146, 212
BsaXI ACNNNNNCTCC 2 cut(s) 98, 128
Bsc4I CCNNNNNNNGG 3 cut(s) 1705, 1897, 1898
Bse118I RCCGGY 1 cut(s) 146
Bse1I ACTGG 2 cut(s) 1157, 1997
Bse21I CCTNAGG 1 cut(s) 369
Bse3DI GCAATG 4 cut(s) 423, 543, 1182, 1722
BseAI TCCGGA 1 cut(s) 212
BseBI CCWGG 2 cut(s) 936, 1524
BseCI ATCGAT 1 cut(s) 1939
BseDI CCNNGG 2 cut(s) 26, 573
BseGI GGATG 6 cut(s) 439, 472, 652, 1030, 1840, 1887
BseLI CCNNNNNNNGG 3 cut(s) 1705, 1897, 1898
BseMI GCAATG 4 cut(s) 423, 543, 1182, 1722
BseMII CTCAG 4 cut(s) 42, 759, 1059, 1305
BseNI ACTGG 2 cut(s) 1157, 1997
BseSI GKGCMC 2 cut(s) 119, 1303
BseYI CCCAGC 1 cut(s) 428
Bsh1236I CGCG 2 cut(s) 41, 1352
BshFI GGCC 1 cut(s) 1235
BshNI GGYRCC 2 cut(s) 97, 1214
BshTI ACCGGT 1 cut(s) 146
BshVI ATCGAT 1 cut(s) 1939
BsiHKAI GWGCWC 2 cut(s) 119, 1303
BsiSI CCGG 7 cut(s) 26, 67, 104, 147, 213, 510, 875
BslI CCNNNNNNNGG 3 cut(s) 1705, 1897, 1898
BsmAI GTCTC 2 cut(s) 1363, 1583
BsnI GGCC 1 cut(s) 1235
Bsp119I TTCGAA 1 cut(s) 199
Bsp1286I GDGCHC 2 cut(s) 119, 1303
Bsp13I TCCGGA 1 cut(s) 212
Bsp1407I TGTACA 1 cut(s) 463
Bsp143I GATC 5 cut(s) 138, 169, 892, 1384, 1936
Bsp68I TCGCGA 1 cut(s) 41
BspACI CCGC 3 cut(s) 101, 125, 812
BspANI GGCC 1 cut(s) 1235
BspCNI CTCAG 4 cut(s) 43, 760, 1060, 1306
BspDI ATCGAT 1 cut(s) 1939
BspEI TCCGGA 1 cut(s) 212
BspFNI CGCG 2 cut(s) 41, 1352
BspLI GGNNCC 2 cut(s) 99, 1216
BspMAI CTGCAG 2 cut(s) 1552, 1672
BspMI ACCTGC 3 cut(s) 85, 1555, 1675
BspOI GCTAGC 1 cut(s) 35
BspPI GGATC 1 cut(s) 146
BspQI GCTCTTC 1 cut(s) 1139
BspT104I TTCGAA 1 cut(s) 199
BspT107I GGYRCC 2 cut(s) 97, 1214
BsrDI GCAATG 4 cut(s) 423, 543, 1182, 1722
BsrFI RCCGGY 1 cut(s) 146
BsrGI TGTACA 1 cut(s) 463
BsrI ACTGG 2 cut(s) 1157, 1997
BssAI RCCGGY 1 cut(s) 146
BssECI CCNNGG 2 cut(s) 26, 573
BssMI GATC 5 cut(s) 138, 169, 892, 1384, 1936
BssNI GRCGYC 3 cut(s) 364, 1573, 1741
BssT1I CCWWGG 1 cut(s) 573
Bst2UI CCWGG 2 cut(s) 936, 1524
Bst4CI ACNGT 3 cut(s) 869, 1051, 1374
Bst6I CTCTTC 1 cut(s) 1139
BstACI GRCGYC 3 cut(s) 364, 1573, 1741
BstAUI TGTACA 1 cut(s) 463
BstBAI YACGTR 3 cut(s) 677, 1277, 1580
BstBI TTCGAA 1 cut(s) 199
BstC8I GCNNGC 3 cut(s) 33, 62, 1205
BstDEI CTNAG 6 cut(s) 51, 369, 522, 768, 1068, 1314
BstF5I GGATG 6 cut(s) 439, 472, 652, 1030, 1840, 1887
BstFNI CGCG 2 cut(s) 41, 1352
BstHHI GCGC 1 cut(s) 1865
BstKTI GATC 5 cut(s) 141, 172, 895, 1387, 1939
BstMAI GTCTC 2 cut(s) 1363, 1583
BstMBI GATC 5 cut(s) 138, 169, 892, 1384, 1936
BstMWI GCNNNNNNNGC 4 cut(s) 61, 70, 100, 1860
BstNI CCWGG 2 cut(s) 936, 1524
BstNSI RCATGY 6 cut(s) 115, 536, 692, 1207, 1260, 1396
BstSCI CCNGG 4 cut(s) 25, 874, 934, 1522
BstSFI CTRYAG 2 cut(s) 1548, 1668
BstSLI GKGCMC 2 cut(s) 119, 1303
BstSNI TACGTA 1 cut(s) 677
BstUI CGCG 2 cut(s) 41, 1352
BstV2I GAAGAC 5 cut(s) 656, 779, 822, 854, 1568
BstX2I RGATCY 1 cut(s) 138
BstXI CCANNNNNNTGG 1 cut(s) 1617
BstYI RGATCY 1 cut(s) 138
Bsu15I ATCGAT 1 cut(s) 1939
Bsu36I CCTNAGG 1 cut(s) 369
BsuRI GGCC 1 cut(s) 1235
BsuTUI ATCGAT 1 cut(s) 1939
BtgZI GCGATG 1 cut(s) 56
BtsCI GGATG 6 cut(s) 439, 472, 652, 1030, 1840, 1887
BtsIMutI CAGTG 3 cut(s) 633, 1047, 1407
BtuMI TCGCGA 1 cut(s) 41
BveI ACCTGC 3 cut(s) 85, 1555, 1675
Cac8I GCNNGC 3 cut(s) 33, 62, 1205
CfoI GCGC 1 cut(s) 1865
Cfr10I RCCGGY 1 cut(s) 146
Cfr13I GGNCC 1 cut(s) 1233
ClaI ATCGAT 1 cut(s) 1939
CseI GACGC 5 cut(s) 353, 522, 1358, 1562, 1730
CspAI ACCGGT 1 cut(s) 146
CspCI CAANNNNNGTGG 2 cut(s) 525, 560
DdeI CTNAG 6 cut(s) 51, 369, 522, 768, 1068, 1314
DpnI GATC 5 cut(s) 140, 171, 894, 1386, 1938
DpnII GATC 5 cut(s) 138, 169, 892, 1384, 1936
DraI TTTAAA 1 cut(s) 291
Eam1104I CTCTTC 1 cut(s) 1139
EarI CTCTTC 1 cut(s) 1139
EciI GGCGGA 1 cut(s) 827
Eco105I TACGTA 1 cut(s) 677
Eco130I CCWWGG 1 cut(s) 573
Eco57I CTGAAG 2 cut(s) 650, 1431
Eco81I CCTNAGG 1 cut(s) 369
EcoRII CCWGG 2 cut(s) 934, 1522
EcoT14I CCWWGG 1 cut(s) 573
EcoT22I ATGCAT 3 cut(s) 1030, 1398, 1962
ErhI CCWWGG 1 cut(s) 573
FauNDI CATATG 2 cut(s) 505, 1437
FbaI TGATCA 1 cut(s) 1384
Fnu4HI GCNGC 1 cut(s) 101
FokI GGATG 6 cut(s) 446, 459, 639, 1037, 1847, 1894
Fsp4HI GCNGC 1 cut(s) 101
FspBI CTAG 8 cut(s) 32, 57, 375, 558, 1401, 1482, 1593, 1641
GlaI GCGC 1 cut(s) 1864
GluI GCNGC 1 cut(s) 101
GsaI CCCAGC 1 cut(s) 432
HaeIII GGCC 1 cut(s) 1235
HapII CCGG 7 cut(s) 26, 67, 104, 147, 213, 510, 875
HgaI GACGC 5 cut(s) 353, 522, 1358, 1562, 1730
HhaI GCGC 1 cut(s) 1865
Hin1I GRCGYC 3 cut(s) 364, 1573, 1741
Hin6I GCGC 1 cut(s) 1863
HinP1I GCGC 1 cut(s) 1863
HincII GTYRAC 1 cut(s) 555
HindII GTYRAC 1 cut(s) 555
HindIII AAGCTT 1 cut(s) 293
HinfI GANTC 7 cut(s) 121, 209, 322, 850, 1103, 1354, 1519
HpaII CCGG 7 cut(s) 26, 67, 104, 147, 213, 510, 875
HphI GGTGA 8 cut(s) 161, 199, 284, 635, 769, 1085, 1656, 1946
Hpy166II GTNNAC 5 cut(s) 117, 464, 555, 1301, 1577
Hpy188I TCNGA 6 cut(s) 174, 208, 327, 669, 1389, 1949
Hpy8I GTNNAC 5 cut(s) 117, 464, 555, 1301, 1577
Hpy99I CGWCG 2 cut(s) 1605, 1746
HpyAV CCTTC 8 cut(s) 127, 195, 489, 500, 614, 787, 1010, 1819
HpyCH4III ACNGT 3 cut(s) 869, 1051, 1374
HpyCH4IV ACGT 6 cut(s) 676, 978, 1276, 1579, 1603, 1997
HpyF10VI GCNNNNNNNGC 4 cut(s) 61, 70, 100, 1860
HpyF3I CTNAG 6 cut(s) 51, 369, 522, 768, 1068, 1314
HpySE526I ACGT 6 cut(s) 676, 978, 1276, 1579, 1603, 1997
Hsp92I GRCGYC 3 cut(s) 364, 1573, 1741
HspAI GCGC 1 cut(s) 1863
Kpn2I TCCGGA 1 cut(s) 212
KpnI GGTACC 1 cut(s) 1218
Ksp22I TGATCA 1 cut(s) 1384
Kzo9I GATC 5 cut(s) 138, 169, 892, 1384, 1936
LguI GCTCTTC 1 cut(s) 1139
LmnI GCTCC 2 cut(s) 69, 1860
LweI GCATC 3 cut(s) 289, 1015, 1825
MaeI CTAG 8 cut(s) 32, 57, 375, 558, 1401, 1482, 1593, 1641
MaeII ACGT 6 cut(s) 676, 978, 1276, 1579, 1603, 1997
MaeIII GTNAC 6 cut(s) 272, 497, 757, 886, 1279, 1403
MalI GATC 5 cut(s) 140, 171, 894, 1386, 1938
MboI GATC 5 cut(s) 138, 169, 892, 1384, 1936
MfeI CAATTG 1 cut(s) 1787
MflI RGATCY 1 cut(s) 138
MhlI GDGCHC 2 cut(s) 119, 1303
MlyI GAGTC 3 cut(s) 331, 844, 1112
MmeI TCCRAC 1 cut(s) 1859
MnlI CCTC 7 cut(s) 78, 405, 486, 802, 1063, 1810, 1984
Mph1103I ATGCAT 3 cut(s) 1030, 1398, 1962
MroI TCCGGA 1 cut(s) 212
MroXI GAANNNNTTC 2 cut(s) 776, 1419
MseI TTAA 8 cut(s) 290, 420, 969, 1032, 1245, 1539, 1821, 1830
MslI CAYNNNNRTG 3 cut(s) 504, 1401, 1615
MspI CCGG 7 cut(s) 26, 67, 104, 147, 213, 510, 875
MspR9I CCNGG 4 cut(s) 27, 876, 936, 1524
MunI CAATTG 1 cut(s) 1787
MvaI CCWGG 2 cut(s) 936, 1524
MvnI CGCG 2 cut(s) 41, 1352
MwoI GCNNNNNNNGC 4 cut(s) 61, 70, 100, 1860
NciI CCSGG 2 cut(s) 27, 876
NdeI CATATG 2 cut(s) 505, 1437
NdeII GATC 5 cut(s) 138, 169, 892, 1384, 1936
NheI GCTAGC 1 cut(s) 31
NlaIV GGNNCC 2 cut(s) 99, 1216
NmuCI GTSAC 5 cut(s) 272, 497, 757, 886, 1403
NruI TCGCGA 1 cut(s) 41
NsiI ATGCAT 3 cut(s) 1030, 1398, 1962
NspI RCATGY 6 cut(s) 115, 536, 692, 1207, 1260, 1396
NspV TTCGAA 1 cut(s) 199
PaeI GCATGC 1 cut(s) 1207
PaqCI CACCTGC 2 cut(s) 85, 1675
PciI ACATGT 2 cut(s) 111, 688
PciSI GCTCTTC 1 cut(s) 1139
PdmI GAANNNNTTC 2 cut(s) 776, 1419
PfeI GAWTC 4 cut(s) 121, 209, 1354, 1519
PflMI CCANNNNNTGG 1 cut(s) 1705
PinAI ACCGGT 1 cut(s) 146
PkrI GCNGC 1 cut(s) 102
PleI GAGTC 3 cut(s) 330, 844, 1111
PpsI GAGTC 3 cut(s) 330, 844, 1111
Ppu21I YACGTR 3 cut(s) 677, 1277, 1580
PscI ACATGT 2 cut(s) 111, 688
PshBI ATTAAT 1 cut(s) 969
Psp6I CCWGG 2 cut(s) 934, 1522
PspFI CCCAGC 1 cut(s) 428
PspGI CCWGG 2 cut(s) 934, 1522
PspN4I GGNNCC 2 cut(s) 99, 1216
PspPI GGNCC 1 cut(s) 1233
PstI CTGCAG 2 cut(s) 1552, 1672
PsuI RGATCY 1 cut(s) 138
RruI TCGCGA 1 cut(s) 41
RseI CAYNNNNRTG 3 cut(s) 504, 1401, 1615
SapI GCTCTTC 1 cut(s) 1139
SaqAI TTAA 8 cut(s) 290, 420, 969, 1032, 1245, 1539, 1821, 1830
SatI GCNGC 1 cut(s) 101
Sau3AI GATC 5 cut(s) 138, 169, 892, 1384, 1936
Sau96I GGNCC 1 cut(s) 1233
ScaI AGTACT 2 cut(s) 349, 1597
SchI GAGTC 3 cut(s) 331, 844, 1112
ScrFI CCNGG 4 cut(s) 27, 876, 936, 1524
SduI GDGCHC 2 cut(s) 119, 1303
SfaNI GCATC 3 cut(s) 289, 1015, 1825
SfcI CTRYAG 2 cut(s) 1548, 1668
SfuI TTCGAA 1 cut(s) 199
SgrAI CRCCGGYG 1 cut(s) 146
SmiMI CAYNNNNRTG 3 cut(s) 504, 1401, 1615
SmlI CTYRAG 3 cut(s) 82, 593, 1091
SmoI CTYRAG 3 cut(s) 82, 593, 1091
SnaBI TACGTA 1 cut(s) 677
SpeI ACTAGT 3 cut(s) 557, 1400, 1592
SphI GCATGC 1 cut(s) 1207
SsiI CCGC 3 cut(s) 101, 125, 812
SspI AATATT 1 cut(s) 1243
SspMI CTAG 8 cut(s) 32, 57, 375, 558, 1401, 1482, 1593, 1641
StyD4I CCNGG 4 cut(s) 25, 874, 934, 1522
StyI CCWWGG 1 cut(s) 573
TaaI ACNGT 3 cut(s) 869, 1051, 1374
TaiI ACGT 6 cut(s) 679, 981, 1279, 1582, 1606, 2000
TaqI TCGA 9 cut(s) 6, 199, 895, 943, 1444, 1600, 1729, 1744, 1939
TatI WGTACW 7 cut(s) 347, 463, 1115, 1268, 1317, 1529, 1595
TauI GCSGC 1 cut(s) 103
TfiI GAWTC 4 cut(s) 121, 209, 1354, 1519
Tru1I TTAA 8 cut(s) 290, 420, 969, 1032, 1245, 1539, 1821, 1830
Tru9I TTAA 8 cut(s) 290, 420, 969, 1032, 1245, 1539, 1821, 1830
TscAI CASTG 3 cut(s) 640, 1054, 1414
TseFI GTSAC 5 cut(s) 272, 497, 757, 886, 1403
Tsp45I GTSAC 5 cut(s) 272, 497, 757, 886, 1403
TspGWI ACGGA 1 cut(s) 145
TspRI CASTG 3 cut(s) 640, 1054, 1414
Van91I CCANNNNNTGG 1 cut(s) 1705
VneI GTGCAC 2 cut(s) 115, 1299
VspI ATTAAT 1 cut(s) 969
XapI RAATTY 2 cut(s) 1109, 1490
XceI RCATGY 6 cut(s) 115, 536, 692, 1207, 1260, 1396
XcmI CCANNNNNNNNNTGG 1 cut(s) 1853
XmnI GAANNNNTTC 2 cut(s) 776, 1419
XspI CTAG 8 cut(s) 32, 57, 375, 558, 1401, 1482, 1593, 1641
ZrmI AGTACT 2 cut(s) 349, 1597
Zsp2I ATGCAT 3 cut(s) 1030, 1398, 1962
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.