RchiOBHm_Chr4g0385841

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0000143
Physical Location & Seq
Reverse (-)
1443687 .. 1447340
3654 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ35926

Sequence Viewer

Length: 2055 bp
ATGGAACAAGAGCCCCTGGATGCTGGGTTGCAAATTTCTATGTCTTCAGATGATATGGAAGACGACTTACAGTCAAATCACCCGTCTAGTATCATTGAAGTCCCCATTGTCAATGGCCCCTCTATGATTGATGATTCTGATGAATTCCTCTCATTATCGACGAAATTTTTTGAAAATCGAGAAGACCTTGTCAGTGCTATTCGTAAGATTGGGTTGCTGCAAGGTTACGTTATGGTAATTACAAGATCTAGAAGCAATAGAGATGTGGCTATTGGTTGTGATAGAGGTGGTTGTTATCGAACCTGCTCTGCACTTGAGGAGAAGAAAAAGAATTCAGCTTCTCGTCGGATAGATTGCCCTTTCAAAATTGTGGGAAGAAGGACAGCTGAAGGGTTGTGGAAGGTCGAGATAAGTAGCTTGTTACATAATCATGAGCCTTCCACTGACATGGCTGGACATCCATATTGTCGTCGGTTTACTAAAGAGGAAGCCTCACAAGTTGAACAAATGAGTCGGGCTGGCATAAAACCACGTCAAATTCTCTCTTCGCTTCGACAAAGTAATCCTGATCTTCTAGCTGTTTCCAGAAATATATATAGCAAGACATCTCAGTTTAGAAGGGAGAGTCTAGGTGGGCGTTCGATTATTCAAGCATTATTAGATGAGCTTGGTGGTGCTGGTTTTTCTCATAATGTCAAATATGATCACTCTGGTCATTTGACTCATCTATTCTTTGCTCATCCCACTTCCATTGAGTTGACTAAAAGCTACTCTAATGTCTTTGTGATGGATTGTACTTATAAGACAAATAAGTACAAGATGCCATTACTTGAGATTGTAGGAGTGTCGAGTTTCAACACATCATTCTATTCATGTTTTGTTTTCATGCAAAAAGAGGAACAACAGGATTATCAGTGGGCTCTTGAAATGTTCAGTAAGTTGTTGGGAGATGGTAATCATCCATTGGCGATTATAATTGATAGGGAGTTGGCTTTAATGAAAGCAATACAAGTTGTGTTTCCGATGACTCCTAATCTTTTATGCATATGGCATATTGAAAAAAATATTCTTGCACATTGTAAGGGTCAGTTTAAGGAAGATGCAGATTGGGTTGGTTTTATGTCTTCTTGGAGTACCCTTGTAAAGTCTTGGGACGTGTCAACGTTTAATGAAGTTTGGAACCGTTTTCAAATTGAGTACAAAGACTATGCTTCCATTCTAACTTACATTGGCAATACTTGGCTTCCATGGAAAGAGAGGTTTGTATTTGCATGGACCGGACAGATTTCACACTTTGGTAATAATGTTACTTCTAGAGCAGAAGGTGCACATGGAACCTTAAAGAAATATCTTCAAGTTTCTACTGGTGGTCTCCGTGAAGTGAAGGAAAATATTTGTCTTGCTATTCAAAATCAGTTTCAAGAAATTAGAACTCAACTTGCAAGTGAAAAAATTCGTGTTCCTCAAAAGCTTTGCATCCCTTTCTTTAAAGAGGTGATTAATAAGGTATCTTTCTATGCTTTGTTTGAGTTACAAAAGCAATATTTGTTGGCAAATGCCAAAGACTATTCATCCCAATGCAAGGGCCAGTTTTCCAAAACCATGGGTCTTCCATGTGTGCACATGATCAAGGAGATTAATATTGAAGTGCTGCCTTTAAATCAGATTCATGAGCAATGGAGGATTGGCACAAGATCATTCACTAATGATCATCGTGCAAGCTTGGATCATGAAGATCCATTTAGTAGTCTTTTATCTGAGGTTAAAGAGAAGTACGAAAAACAGCCTCTAGCGCAAAAAGAAAATACCATAAGGCAGCTTTCTCAGATTCTTGGTGCATCTTGTCCTTTAATTTTTAAACCTACTCTTCAACCTCACAAAGGTCGTCCGGTAGGATCAAATAAAAGAAAGGAAACTAGCTCTACAAGGCGGGAACCTTCATATTTTGAGAGAGTGGAGAAGGCACCTCGAAAATGTAGTGGGTGCGGTAATATTGGCCATTATCGAAACAAGTGTCCATCAAATAATAAGTCTACCACACTAGGAACACAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE

Protein Analysis

684

Amino Acids

78.07

Weight (kDa)

8.77

Isoelectric Point (pI)

52.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ZSWIM1-3_RNaseH-like PF21056 231 - 343 2.5e-12 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE PF10551 260 - 355 1.2e-24 MULE transposase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000143)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G76710 AT1G76710 AT1G76710 AT1G76710
fragaria_vesca FvH4_1g20063 FvH4_2g15231 FvH4_3g04011 FvH4_3g28681 FvH4_4g01411 FvH4_4g10181 FvH4_4g15922 FvH4_4g16651 FvH4_4g16652 FvH4_5g13892 FvH4_5g13893 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g25511 FvH4_6g12551 FvH4_6g12552 FvH4_6g38841 FvH4_7g04391
malus_domestica MD05G1031300.v1.1 MD05G1031400.v1.1 MD05G1031500.v1.1 MD08G1164400.v1.1 MD10G1032900.v1.1 MD10G1033000.v1.1 MD10G1033100.v1.1
prunus_persica Prupe.3G240700_v2.0.a1 Prupe.7G144600_v2.0.a1 Prupe.8G038500_v2.0.a1 Prupe.8G038500_v2.0.a1
pyrus_communis pycom05g02250 pycom05g02260 pycom05g02270 pycom05g02280 pycom08g14160 pycom10g02100 pycom10g02110 pycom10g02130
rosa_chinensis RchiOBHm_Chr1g0329481 RchiOBHm_Chr1g0329491 RchiOBHm_Chr1g0341531 RchiOBHm_Chr3g0464811 RchiOBHm_Chr3g0494701 RchiOBHm_Chr3g0497501 RchiOBHm_Chr4g0385841 RchiOBHm_Chr5g0061181 RchiOBHm_Chr6g0263001 RchiOBHm_Chr7g0193111 RchiOBHm_Chr7g0206281 RchiOBHm_Chr7g0206311
rosa_laevigata RLG00000018908 RLG00000028528 RLG00000028803 RLG00000029882 RLG00000029883 RLG00000030361
rosa_multiflora Rmu_co8196328.1_g000001 Rmu_co8259135.1_g000001 Rmu_co8269185.1_g000001 Rmu_sc0000076.1_g000019 Rmu_sc0000311.1_g000007 Rmu_sc0000429.1_g000038 Rmu_sc0000429.1_g000039 Rmu_sc0000429.1_g000040 Rmu_sc0000511.1_g000005 Rmu_sc0000539.1_g000054 Rmu_sc0000566.1_g000039 Rmu_sc0000805.1_g000032 Rmu_sc0000870.1_g000073 Rmu_sc0000870.1_g000074 Rmu_sc0001010.1_g000018 Rmu_sc0001083.1_g000013 Rmu_sc0001114.1_g000011 Rmu_sc0001702.1_g000027 Rmu_sc0001779.1_g000012 Rmu_sc0002923.1_g000036 Rmu_sc0003242.1_g000011 Rmu_sc0003291.1_g000036 Rmu_sc0003393.1_g000012 Rmu_sc0003872.1_g000016 Rmu_sc0003872.1_g000017 Rmu_sc0003872.1_g000018 Rmu_sc0004084.1_g000020 Rmu_sc0004386.1_g000005 Rmu_sc0004622.1_g000005 Rmu_sc0004742.1_g000021 Rmu_sc0004755.1_g000020 Rmu_sc0004805.1_g000036 Rmu_sc0005065.1_g000006 Rmu_sc0005177.1_g000004 Rmu_sc0006373.1_g000003 Rmu_sc0006373.1_g000004 Rmu_sc0007121.1_g000002 Rmu_sc0007943.1_g000003 Rmu_sc0010368.1_g000006 Rmu_sc0010543.1_g000001 Rmu_sc0012591.1_g000006 Rmu_sc0013504.1_g000009 Rmu_sc0015025.1_g000001 Rmu_sc0016170.1_g000001 Rmu_sc0017156.1_g000001 Rmu_sc0026439.1_g000001
rosa_roxburghii Rroxscaffold_175G00432280 Rroxscaffold_1G00030190 Rroxscaffold_1G00030880 Rroxscaffold_2G00090520 Rroxscaffold_3G00227940 Rroxscaffold_3G00233400 Rroxscaffold_3G00238500 Rroxscaffold_3G00251650 Rroxscaffold_4G00301570 Rroxscaffold_4G00321040 Rroxscaffold_5G00350880 Rroxscaffold_7G00184400
rosa_rugosa Rorug01G0080800 Rorug01G0080900 Rorug01G0193900 Rorug02G0275900 Rorug02G0275900 Rorug02G0275900 Rorug02G0305400 Rorug02G0311800 Rorug02G0350400 Rorug02G0381300 Rorug03G0136700 Rorug03G0181900 Rorug03G0268000 Rorug04G0301600 Rorug05G0175100 Rorug05G0250700 Rorug05G0298200 Rorug05G0596000 Rorug06G0029500 Rorug07G0094300 Rorug07G0094300 Rorug07G0095400 Rorug07G0140100
rosa_samantha Rh1AG099200 Rh1AG190500 Rh1BG078900 Rh1BG079000 Rh1BG079100 Rh1CG084600 Rh1CG084700 Rh1CG095300 Rh1CG175900 Rh1DG103300 Rh1DG150400 Rh2AG079300 Rh2AG272400 Rh2AG464800 Rh2AG507400 Rh2DG078300 Rh2DG078400 Rh3CG206900 Rh3CG295400 Rh3DG206800 Rh3DG356200 Rh4CG071500 Rh4CG179200 Rh4DG064700 Rh5CG362400 Rh7AG212300 Rh7AG226200 Rh7BG222200
rosa_wichuraiana Rw0G009990 Rw0G011260 Rw0G011270 Rw0G012910 Rw0G013740 Rw1G007740 Rw1G013050 Rw1G014230 Rw2G014270 Rw3G012720 Rw3G028110 Rw4G006630 Rw4G015270 Rw4G016160 Rw4G031380 Rw5G011440 Rw5G029180 Rw5G048360 Rw5G048430 Rw5G048780 Rw6G005250 Rw6G006390 Rw7G002840 Rw7G014080 Rw7G019650 Rw7G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 801, 974
Acc36I ACCTGC 1 cut(s) 311
AccB1I GGYRCC 1 cut(s) 1963
AccI GTMKAC 1 cut(s) 2033
AciI CCGC 2 cut(s) 1930, 1986
AclI AACGTT 1 cut(s) 1163
AclWI GGATC 3 cut(s) 1730, 1734, 1903
AcoI YGGCCR 1 cut(s) 1996
AcsI RAATTY 6 cut(s) 33, 143, 164, 331, 537, 1452
AcuI CTGAAG 2 cut(s) 30, 408
AfaI GTAC 5 cut(s) 796, 815, 1135, 1199, 1775
AfiI CCNNNNNNNGG 2 cut(s) 1582, 1880
AflIII ACRYGT 1 cut(s) 1155
AhdI GACNNNNNGTC 1 cut(s) 70
AjiI CACGTC 2 cut(s) 533, 1156
AjnI CCWGG 1 cut(s) 15
Alw21I GWGCWC 2 cut(s) 1330, 1623
Alw26I GTCTC 1 cut(s) 1376
Alw44I GTGCAC 2 cut(s) 1326, 1619
AlwI GGATC 3 cut(s) 1730, 1734, 1903
AoxI GGCC 3 cut(s) 115, 1585, 1996
ApaLI GTGCAC 2 cut(s) 1326, 1619
ApeKI GCWGC 3 cut(s) 217, 1651, 1816
ApoI RAATTY 6 cut(s) 33, 143, 164, 331, 537, 1452
ArsI GACNNNNNNTTYG 6 cut(s) 68, 100, 1999, 2015, 2031, 2047
AseI ATTAAT 2 cut(s) 1500, 1638
Asp700I GAANNNNTTC 1 cut(s) 1452
AspLEI GCGC 1 cut(s) 1795
AspS9I GGNCC 3 cut(s) 116, 1275, 1585
AsuHPI GGTGA 2 cut(s) 71, 1507
AvaII GGWCC 1 cut(s) 1275
BaeGI GKGCMC 2 cut(s) 1330, 1623
BalI TGGCCA 1 cut(s) 1998
BanI GGYRCC 1 cut(s) 1963
BanII GRGCYC 2 cut(s) 15, 922
BarI GAAGNNNNNNTAC 2 cut(s) 51, 83
BbsI GAAGAC 5 cut(s) 36, 66, 189, 1116, 1601
Bbv12I GWGCWC 2 cut(s) 1330, 1623
BbvI GCAGC 3 cut(s) 204, 1638, 1828
BccI CCATC 3 cut(s) 781, 944, 2026
BciT130I CCWGG 1 cut(s) 17
BclI TGATCA 3 cut(s) 703, 1626, 1708
BcoDI GTCTC 1 cut(s) 1376
BfaI CTAG 8 cut(s) 87, 249, 575, 629, 1314, 1790, 1917, 2042
BfuAI ACCTGC 1 cut(s) 311
BglII AGATCT 1 cut(s) 245
BisI GCNGC 3 cut(s) 218, 1652, 1817
BlsI GCNGC 3 cut(s) 219, 1653, 1818
Bme1390I CCNGG 1 cut(s) 17
Bme18I GGWCC 1 cut(s) 1275
BmeRI GACNNNNNGTC 1 cut(s) 70
BmgBI CACGTC 2 cut(s) 533, 1156
BmgT120I GGNCC 3 cut(s) 116, 1275, 1585
BmiI GGNNCC 5 cut(s) 118, 1181, 1336, 1935, 1965
BmrFI CCNGG 1 cut(s) 17
BmsI GCATC 5 cut(s) 10, 810, 1090, 1485, 1847
BpiI GAAGAC 5 cut(s) 36, 66, 189, 1116, 1601
BplI GAGNNNNNCTC 2 cut(s) 476, 508
BpuEI CTTGAG 2 cut(s) 335, 851
BsaBI GATNNNNATC 1 cut(s) 954
BsaI GGTCTC 1 cut(s) 1376
BsaJI CCNNGG 3 cut(s) 15, 1247, 1602
BsaWI WCCGGW 2 cut(s) 1277, 1888
Bsc4I CCNNNNNNNGG 2 cut(s) 1582, 1880
Bse1I ACTGG 2 cut(s) 1369, 1588
Bse3DI GCAATG 1 cut(s) 1682
Bse8I GATNNNNATC 1 cut(s) 954
BseBI CCWGG 1 cut(s) 17
BseDI CCNNGG 3 cut(s) 15, 1247, 1602
BseGI GGATG 6 cut(s) 25, 457, 739, 958, 1476, 1571
BseJI GATNNNNATC 1 cut(s) 954
BseLI CCNNNNNNNGG 2 cut(s) 1582, 1880
BseMI GCAATG 1 cut(s) 1682
BseMII CTCAG 3 cut(s) 623, 1749, 1838
BseNI ACTGG 2 cut(s) 1369, 1588
BseRI GAGGAG 1 cut(s) 332
BseSI GKGCMC 2 cut(s) 1330, 1623
BseXI GCAGC 3 cut(s) 204, 1638, 1828
BseYI CCCAGC 1 cut(s) 23
BsgI GTGCAG 1 cut(s) 294
BshFI GGCC 3 cut(s) 117, 1587, 1998
BshNI GGYRCC 1 cut(s) 1963
BsiHKAI GWGCWC 2 cut(s) 1330, 1623
BsiSI CCGG 2 cut(s) 1278, 1889
BslFI GGGAC 2 cut(s) 86, 1166
BslI CCNNNNNNNGG 2 cut(s) 1582, 1880
BsmAI GTCTC 1 cut(s) 1376
BsmFI GGGAC 2 cut(s) 86, 1166
BsnI GGCC 3 cut(s) 117, 1587, 1998
Bso31I GGTCTC 1 cut(s) 1376
Bsp1286I GDGCHC 4 cut(s) 15, 922, 1330, 1623
Bsp143I GATC 9 cut(s) 245, 568, 703, 1626, 1694, 1708, 1726, 1735, 1895
Bsp19I CCATGG 2 cut(s) 1247, 1602
BspACI CCGC 2 cut(s) 1930, 1986
BspANI GGCC 3 cut(s) 117, 1587, 1998
BspCNI CTCAG 3 cut(s) 622, 1750, 1837
BspHI TCATGA 3 cut(s) 430, 1669, 1729
BspLI GGNNCC 5 cut(s) 118, 1181, 1336, 1935, 1965
BspMI ACCTGC 1 cut(s) 311
BspPI GGATC 3 cut(s) 1730, 1734, 1903
BspT107I GGYRCC 1 cut(s) 1963
BspTNI GGTCTC 1 cut(s) 1376
BsrDI GCAATG 1 cut(s) 1682
BsrI ACTGG 2 cut(s) 1369, 1588
BssECI CCNNGG 3 cut(s) 15, 1247, 1602
BssMI GATC 9 cut(s) 245, 568, 703, 1626, 1694, 1708, 1726, 1735, 1895
BssT1I CCWWGG 2 cut(s) 1247, 1602
Bst2UI CCWGG 1 cut(s) 17
Bst4CI ACNGT 3 cut(s) 72, 1184, 2052
Bst6I CTCTTC 2 cut(s) 550, 1872
BstAPI GCANNNNNTGC 1 cut(s) 1325
BstC8I GCNNGC 2 cut(s) 520, 1720
BstDEI CTNAG 3 cut(s) 609, 1758, 1824
BstDSI CCRYGG 2 cut(s) 1247, 1602
BstENI CCTNNNNNAGG 1 cut(s) 1878
BstF5I GGATG 6 cut(s) 25, 457, 739, 958, 1476, 1571
BstHHI GCGC 1 cut(s) 1795
BstKTI GATC 9 cut(s) 248, 571, 706, 1629, 1697, 1711, 1729, 1738, 1898
BstMAI GTCTC 1 cut(s) 1376
BstMBI GATC 9 cut(s) 245, 568, 703, 1626, 1694, 1708, 1726, 1735, 1895
BstMWI GCNNNNNNNGC 2 cut(s) 1325, 1792
BstNI CCWGG 1 cut(s) 17
BstSCI CCNGG 1 cut(s) 15
BstSLI GKGCMC 2 cut(s) 1330, 1623
BstV1I GCAGC 3 cut(s) 204, 1638, 1828
BstV2I GAAGAC 5 cut(s) 36, 66, 189, 1116, 1601
BstX2I RGATCY 2 cut(s) 245, 1735
BstXI CCANNNNNNTGG 2 cut(s) 448, 1603
BstYI RGATCY 2 cut(s) 245, 1735
BsuRI GGCC 3 cut(s) 117, 1587, 1998
BtgI CCRYGG 2 cut(s) 1247, 1602
BtrI CACGTC 2 cut(s) 533, 1156
BtsCI GGATG 6 cut(s) 25, 457, 739, 958, 1476, 1571
BtsIMutI CAGTG 3 cut(s) 199, 441, 920
BveI ACCTGC 1 cut(s) 311
Cac8I GCNNGC 2 cut(s) 520, 1720
CciI TCATGA 3 cut(s) 430, 1669, 1729
CfoI GCGC 1 cut(s) 1795
Cfr13I GGNCC 3 cut(s) 116, 1275, 1585
Csp6I GTAC 5 cut(s) 795, 814, 1134, 1198, 1774
CspCI CAANNNNNGTGG 2 cut(s) 733, 768
CviQI GTAC 5 cut(s) 795, 814, 1134, 1198, 1774
DdeI CTNAG 3 cut(s) 609, 1758, 1824
DpnI GATC 9 cut(s) 247, 570, 705, 1628, 1696, 1710, 1728, 1737, 1897
DpnII GATC 9 cut(s) 245, 568, 703, 1626, 1694, 1708, 1726, 1735, 1895
DraI TTTAAA 3 cut(s) 1489, 1659, 1858
DriI GACNNNNNGTC 1 cut(s) 70
EaeI YGGCCR 1 cut(s) 1996
Eam1104I CTCTTC 2 cut(s) 550, 1872
Eam1105I GACNNNNNGTC 1 cut(s) 70
EarI CTCTTC 2 cut(s) 550, 1872
Eco130I CCWWGG 2 cut(s) 1247, 1602
Eco24I GRGCYC 2 cut(s) 15, 922
Eco31I GGTCTC 1 cut(s) 1376
Eco47I GGWCC 1 cut(s) 1275
Eco57I CTGAAG 2 cut(s) 30, 408
EcoNI CCTNNNNNAGG 1 cut(s) 1878
EcoRI GAATTC 2 cut(s) 143, 331
EcoRII CCWGG 1 cut(s) 15
EcoT14I CCWWGG 2 cut(s) 1247, 1602
EcoT22I ATGCAT 1 cut(s) 1046
EcoT38I GRGCYC 2 cut(s) 15, 922
ErhI CCWWGG 2 cut(s) 1247, 1602
FaqI GGGAC 2 cut(s) 86, 1166
FauI CCCGC 1 cut(s) 1923
FauNDI CATATG 1 cut(s) 1046
FbaI TGATCA 3 cut(s) 703, 1626, 1708
FblI GTMKAC 1 cut(s) 2033
Fnu4HI GCNGC 3 cut(s) 218, 1652, 1817
FokI GGATG 6 cut(s) 32, 444, 726, 945, 1463, 1558
FriOI GRGCYC 2 cut(s) 15, 922
Fsp4HI GCNGC 3 cut(s) 218, 1652, 1817
FspBI CTAG 8 cut(s) 87, 249, 575, 629, 1314, 1790, 1917, 2042
GlaI GCGC 1 cut(s) 1794
GluI GCNGC 3 cut(s) 218, 1652, 1817
GsaI CCCAGC 1 cut(s) 27
HaeIII GGCC 3 cut(s) 117, 1587, 1998
HapII CCGG 2 cut(s) 1278, 1889
HhaI GCGC 1 cut(s) 1795
Hin6I GCGC 1 cut(s) 1793
HinP1I GCGC 1 cut(s) 1793
HincII GTYRAC 2 cut(s) 759, 1161
HindII GTYRAC 2 cut(s) 759, 1161
HindIII AAGCTT 2 cut(s) 1469, 1720
HinfI GANTC 7 cut(s) 134, 511, 625, 721, 1027, 1666, 1828
HpaII CCGG 2 cut(s) 1278, 1889
HphI GGTGA 2 cut(s) 71, 1507
Hpy166II GTNNAC 6 cut(s) 477, 759, 1161, 1328, 1621, 2034
Hpy188I TCNGA 7 cut(s) 49, 139, 348, 1023, 1665, 1759, 1827
Hpy8I GTNNAC 6 cut(s) 477, 759, 1161, 1328, 1621, 2034
Hpy99I CGWCG 3 cut(s) 163, 348, 474
HpyAV CCTTC 9 cut(s) 372, 383, 394, 447, 612, 1316, 1378, 1947, 1954
HpyCH4III ACNGT 3 cut(s) 72, 1184, 2052
HpyCH4IV ACGT 4 cut(s) 228, 532, 1155, 1163
HpyF10VI GCNNNNNNNGC 2 cut(s) 1325, 1792
HpyF3I CTNAG 3 cut(s) 609, 1758, 1824
HpySE526I ACGT 4 cut(s) 228, 532, 1155, 1163
HspAI GCGC 1 cut(s) 1793
Ksp22I TGATCA 3 cut(s) 703, 1626, 1708
Kzo9I GATC 9 cut(s) 245, 568, 703, 1626, 1694, 1708, 1726, 1735, 1895
Lsp1109I GCAGC 3 cut(s) 204, 1638, 1828
LweI GCATC 5 cut(s) 10, 810, 1090, 1485, 1847
MaeI CTAG 8 cut(s) 87, 249, 575, 629, 1314, 1790, 1917, 2042
MaeII ACGT 4 cut(s) 228, 532, 1155, 1163
MaeIII GTNAC 4 cut(s) 224, 420, 1306, 1530
MalI GATC 9 cut(s) 247, 570, 705, 1628, 1696, 1710, 1728, 1737, 1897
MboI GATC 9 cut(s) 245, 568, 703, 1626, 1694, 1708, 1726, 1735, 1895
MflI RGATCY 2 cut(s) 245, 1735
MhlI GDGCHC 4 cut(s) 15, 922, 1330, 1623
MlsI TGGCCA 1 cut(s) 1998
MluNI TGGCCA 1 cut(s) 1998
MlyI GAGTC 4 cut(s) 520, 634, 715, 1021
MmeI TCCRAC 1 cut(s) 326
Mox20I TGGCCA 1 cut(s) 1998
Mph1103I ATGCAT 1 cut(s) 1046
MroXI GAANNNNTTC 1 cut(s) 1452
MscI TGGCCA 1 cut(s) 1998
MslI CAYNNNNRTG 3 cut(s) 429, 446, 1576
Msp20I TGGCCA 1 cut(s) 1998
MspA1I CMGCKG 1 cut(s) 386
MspI CCGG 2 cut(s) 1278, 1889
MspR9I CCNGG 1 cut(s) 17
MvaI CCWGG 1 cut(s) 17
MwoI GCNNNNNNNGC 2 cut(s) 1325, 1792
NcoI CCATGG 2 cut(s) 1247, 1602
NdeI CATATG 1 cut(s) 1046
NdeII GATC 9 cut(s) 245, 568, 703, 1626, 1694, 1708, 1726, 1735, 1895
NlaIV GGNNCC 5 cut(s) 118, 1181, 1336, 1935, 1965
NsiI ATGCAT 1 cut(s) 1046
PagI TCATGA 3 cut(s) 430, 1669, 1729
PdmI GAANNNNTTC 1 cut(s) 1452
PfeI GAWTC 3 cut(s) 134, 1666, 1828
PflFI GACNNNGTC 1 cut(s) 188
PkrI GCNGC 3 cut(s) 219, 1653, 1818
PleI GAGTC 4 cut(s) 519, 633, 715, 1021
PpsI GAGTC 4 cut(s) 519, 633, 715, 1021
PshBI ATTAAT 2 cut(s) 1500, 1638
PsiI TTATAA 2 cut(s) 801, 974
Psp1406I AACGTT 1 cut(s) 1163
Psp6I CCWGG 1 cut(s) 15
PspFI CCCAGC 1 cut(s) 23
PspGI CCWGG 1 cut(s) 15
PspN4I GGNNCC 5 cut(s) 118, 1181, 1336, 1935, 1965
PspPI GGNCC 3 cut(s) 116, 1275, 1585
PsuI RGATCY 2 cut(s) 245, 1735
PsyI GACNNNGTC 1 cut(s) 188
PvuII CAGCTG 1 cut(s) 386
RsaI GTAC 5 cut(s) 796, 815, 1135, 1199, 1775
RsaNI GTAC 5 cut(s) 795, 814, 1134, 1198, 1774
RseI CAYNNNNRTG 3 cut(s) 429, 446, 1576
SatI GCNGC 3 cut(s) 218, 1652, 1817
Sau3AI GATC 9 cut(s) 245, 568, 703, 1626, 1694, 1708, 1726, 1735, 1895
Sau96I GGNCC 3 cut(s) 116, 1275, 1585
SchI GAGTC 4 cut(s) 520, 634, 715, 1021
ScrFI CCNGG 1 cut(s) 17
SduI GDGCHC 4 cut(s) 15, 922, 1330, 1623
SfaNI GCATC 5 cut(s) 10, 810, 1090, 1485, 1847
SinI GGWCC 1 cut(s) 1275
SmiMI CAYNNNNRTG 3 cut(s) 429, 446, 1576
SmlI CTYRAG 2 cut(s) 314, 830
SmoI CTYRAG 2 cut(s) 314, 830
SsiI CCGC 2 cut(s) 1930, 1986
SspI AATATT 5 cut(s) 1066, 1393, 1544, 1642, 1993
SspMI CTAG 8 cut(s) 87, 249, 575, 629, 1314, 1790, 1917, 2042
StyD4I CCNGG 1 cut(s) 15
StyI CCWWGG 2 cut(s) 1247, 1602
TaaI ACNGT 3 cut(s) 72, 1184, 2052
TaiI ACGT 4 cut(s) 231, 535, 1158, 1166
TaqI TCGA 9 cut(s) 158, 178, 298, 405, 553, 641, 848, 1969, 2005
TatI WGTACW 3 cut(s) 794, 813, 1197
TfiI GAWTC 3 cut(s) 134, 1666, 1828
TscAI CASTG 3 cut(s) 199, 448, 920
TseI GCWGC 3 cut(s) 217, 1651, 1816
TspDTI ATGAA 9 cut(s) 156, 861, 874, 1013, 1185, 1560, 1658, 1746, 1929
TspGWI ACGGA 1 cut(s) 1364
TspRI CASTG 3 cut(s) 199, 448, 920
Tth111I GACNNNGTC 1 cut(s) 188
VneI GTGCAC 2 cut(s) 1326, 1619
VpaK11BI GGWCC 1 cut(s) 1275
VspI ATTAAT 2 cut(s) 1500, 1638
XagI CCTNNNNNAGG 1 cut(s) 1878
XapI RAATTY 6 cut(s) 33, 143, 164, 331, 537, 1452
XbaI TCTAGA 2 cut(s) 248, 1313
XmiI GTMKAC 1 cut(s) 2033
XmnI GAANNNNTTC 1 cut(s) 1452
XspI CTAG 8 cut(s) 87, 249, 575, 629, 1314, 1790, 1917, 2042
Zsp2I ATGCAT 1 cut(s) 1046
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.