Rorug05G0175100

calcium-transporting ATPase 13, plasma

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
16277067 .. 16284344
7278 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0175100.1

Sequence Viewer

Length: 1305 bp
ATGGCTGTCAGCTATAAATTTTGGAATGAATGCATTGATCCCTTGGACATGCAAGCACTGTGGAATGTTCCTAAAGTGAGCGCTGAATGGGAAGATGCTGGAGAGACCAAAGGACAGAAAGTTCACCTCTCACGTGATCCTGATGGACAGGTTTATTTGACACAGACTGAGATGAAGGCTGTGGCTGAGATCGTCGTTAGCAGGCATTTTTCTGGAAAGATAGATCCTGATATGATTTGTGCTATTGCTGAACTTGAAAGTGATAGACAGCCACTTTGTCAGCGGTATGACAAAAAAGCTAAGGCCACTCACCTAGGGATGATGCAAATTTTACCAAAAACTGCTGATTGGCTGGCTAGTGAGAAGGGTTACGGGGCATATCAATTGAACGGGAATGAACTTCTCCTGTTCAGGCCTTTTGAAAATGTATATTTTGGTGCTGCTTATCTTATTTGGTTATCAAGCTTTGAGCAGAAAGAAAGAAGTGAGGAGTTTGTAGTTAGGGCATATAGAGGAGGTACTAAAAAGGCAACTCACAAATCAACTCTGAAGTATTGGCAACGGTATCTTTCCGTCAAAGAATCTCTTCCATCCAGAAAAAGTCTTGAAGGTCATCGATCTGTTGAAGAGGTTAATGCTTCTCTTGCCCTCGCTAAAAAGACTGGTTCATCGCAAAACACAGGAAAGTTTTCAGGTGGTATGTACACATATTGGGATTCAGTAGCTTCTCCAGAAGACATGGTGGACATGTGGAATCATCCTGAAGTCTCTAAAGAGTGGACTAAAGCTGGAGAGAAACAGGGACGAGTGCACTTCTCCCAAGATGATAAGAAAAGACCATATCTTTCTCGGGTGGAACTGAAGGCAGTGGCAGAAATCATACTCATAAAACACTTCAGCACAAAGCCACTTAAAGTTTCAGTTCTTTGTGCTCTGGCAGAGATTATAAGCATGCGATTCCTGAGTGGCATTGGACCACGTCCTGGTATAATGGGAATCGACTATTCTACAGTTGTATGGCTTTACAGGGAGATGGGCTTTAGGGCATATAGAACTATTTCTGTTGATGATATTTCCAAGCCATTTGTGTCAATGTACTTTGGTGCAGCCTATTTAGTATGGTTAGTGGAATGCGAAGGGAGGTTACAACCTCCACAGTATATTATTCAGGCTTATATCTCAGGGCCAAAGAATGTGAATCTTCAGGATACAGGTCCTGAGTATCTCAAGTTTGAGGAAGCCTTGAGCTACTATGAAGATACAAAGCCGAATCCTAGGGATCAAGGGAGCTGCACCATCATGTAA

Protein Analysis

434

Amino Acids

49.46

Weight (kDa)

7.58

Isoelectric Point (pI)

30.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SLT PF01464 73 - 185 3.3e-11 Transglycosylase SLT domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000143)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G76710 AT1G76710 AT1G76710 AT1G76710
fragaria_vesca FvH4_1g20063 FvH4_2g15231 FvH4_3g04011 FvH4_3g28681 FvH4_4g01411 FvH4_4g10181 FvH4_4g15922 FvH4_4g16651 FvH4_4g16652 FvH4_5g13892 FvH4_5g13893 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g25511 FvH4_6g12551 FvH4_6g12552 FvH4_6g38841 FvH4_7g04391
malus_domestica MD05G1031300.v1.1 MD05G1031400.v1.1 MD05G1031500.v1.1 MD08G1164400.v1.1 MD10G1032900.v1.1 MD10G1033000.v1.1 MD10G1033100.v1.1
prunus_persica Prupe.3G240700_v2.0.a1 Prupe.7G144600_v2.0.a1 Prupe.8G038500_v2.0.a1 Prupe.8G038500_v2.0.a1
pyrus_communis pycom05g02250 pycom05g02260 pycom05g02270 pycom05g02280 pycom08g14160 pycom10g02100 pycom10g02110 pycom10g02130
rosa_chinensis RchiOBHm_Chr1g0329481 RchiOBHm_Chr1g0329491 RchiOBHm_Chr1g0341531 RchiOBHm_Chr3g0464811 RchiOBHm_Chr3g0494701 RchiOBHm_Chr3g0497501 RchiOBHm_Chr4g0385841 RchiOBHm_Chr5g0061181 RchiOBHm_Chr6g0263001 RchiOBHm_Chr7g0193111 RchiOBHm_Chr7g0206281 RchiOBHm_Chr7g0206311
rosa_laevigata RLG00000018908 RLG00000028528 RLG00000028803 RLG00000029882 RLG00000029883 RLG00000030361
rosa_multiflora Rmu_co8196328.1_g000001 Rmu_co8259135.1_g000001 Rmu_co8269185.1_g000001 Rmu_sc0000076.1_g000019 Rmu_sc0000311.1_g000007 Rmu_sc0000429.1_g000038 Rmu_sc0000429.1_g000039 Rmu_sc0000429.1_g000040 Rmu_sc0000511.1_g000005 Rmu_sc0000539.1_g000054 Rmu_sc0000566.1_g000039 Rmu_sc0000805.1_g000032 Rmu_sc0000870.1_g000073 Rmu_sc0000870.1_g000074 Rmu_sc0001010.1_g000018 Rmu_sc0001083.1_g000013 Rmu_sc0001114.1_g000011 Rmu_sc0001702.1_g000027 Rmu_sc0001779.1_g000012 Rmu_sc0002923.1_g000036 Rmu_sc0003242.1_g000011 Rmu_sc0003291.1_g000036 Rmu_sc0003393.1_g000012 Rmu_sc0003872.1_g000016 Rmu_sc0003872.1_g000017 Rmu_sc0003872.1_g000018 Rmu_sc0004084.1_g000020 Rmu_sc0004386.1_g000005 Rmu_sc0004622.1_g000005 Rmu_sc0004742.1_g000021 Rmu_sc0004755.1_g000020 Rmu_sc0004805.1_g000036 Rmu_sc0005065.1_g000006 Rmu_sc0005177.1_g000004 Rmu_sc0006373.1_g000003 Rmu_sc0006373.1_g000004 Rmu_sc0007121.1_g000002 Rmu_sc0007943.1_g000003 Rmu_sc0010368.1_g000006 Rmu_sc0010543.1_g000001 Rmu_sc0012591.1_g000006 Rmu_sc0013504.1_g000009 Rmu_sc0015025.1_g000001 Rmu_sc0016170.1_g000001 Rmu_sc0017156.1_g000001 Rmu_sc0026439.1_g000001
rosa_roxburghii Rroxscaffold_175G00432280 Rroxscaffold_1G00030190 Rroxscaffold_1G00030880 Rroxscaffold_2G00090520 Rroxscaffold_3G00227940 Rroxscaffold_3G00233400 Rroxscaffold_3G00238500 Rroxscaffold_3G00251650 Rroxscaffold_4G00301570 Rroxscaffold_4G00321040 Rroxscaffold_5G00350880 Rroxscaffold_7G00184400
rosa_rugosa Rorug01G0080800 Rorug01G0080900 Rorug01G0193900 Rorug02G0275900 Rorug02G0275900 Rorug02G0275900 Rorug02G0305400 Rorug02G0311800 Rorug02G0350400 Rorug02G0381300 Rorug03G0136700 Rorug03G0181900 Rorug03G0268000 Rorug04G0301600 Rorug05G0175100 Rorug05G0250700 Rorug05G0298200 Rorug05G0596000 Rorug06G0029500 Rorug07G0094300 Rorug07G0094300 Rorug07G0095400 Rorug07G0140100
rosa_samantha Rh1AG099200 Rh1AG190500 Rh1BG078900 Rh1BG079000 Rh1BG079100 Rh1CG084600 Rh1CG084700 Rh1CG095300 Rh1CG175900 Rh1DG103300 Rh1DG150400 Rh2AG079300 Rh2AG272400 Rh2AG464800 Rh2AG507400 Rh2DG078300 Rh2DG078400 Rh3CG206900 Rh3CG295400 Rh3DG206800 Rh3DG356200 Rh4CG071500 Rh4CG179200 Rh4DG064700 Rh5CG362400 Rh7AG212300 Rh7AG226200 Rh7BG222200
rosa_wichuraiana Rw0G009990 Rw0G011260 Rw0G011270 Rw0G012910 Rw0G013740 Rw1G007740 Rw1G013050 Rw1G014230 Rw2G014270 Rw3G012720 Rw3G028110 Rw4G006630 Rw4G015270 Rw4G016160 Rw4G031380 Rw5G011440 Rw5G029180 Rw5G048360 Rw5G048430 Rw5G048780 Rw6G005250 Rw6G006390 Rw7G002840 Rw7G014080 Rw7G019650 Rw7G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 947
AccB7I CCANNNNNTGG 1 cut(s) 983
AciI CCGC 1 cut(s) 283
AclWI GGATC 4 cut(s) 32, 131, 218, 1287
AcsI RAATTY 2 cut(s) 17, 327
AcuI CTGAAG 5 cut(s) 569, 783, 880, 881, 1187
AcvI CACGTG 1 cut(s) 134
AfaI GTAC 3 cut(s) 520, 704, 1097
AfeI AGCGCT 1 cut(s) 82
AfiI CCNNNNNNNGG 1 cut(s) 983
AflIII ACRYGT 1 cut(s) 747
AgsI TTSAA 5 cut(s) 257, 388, 422, 608, 626
AjiI CACGTC 1 cut(s) 980
AjnI CCWGG 1 cut(s) 982
AloI GAACNNNNNNTCC 2 cut(s) 105, 137
AluBI AGCT 7 cut(s) 12, 299, 465, 725, 788, 1248, 1290
AluI AGCT 7 cut(s) 12, 299, 465, 725, 788, 1248, 1290
Alw21I GWGCWC 2 cut(s) 813, 934
Alw26I GTCTC 2 cut(s) 98, 772
Alw44I GTGCAC 1 cut(s) 809
AlwI GGATC 4 cut(s) 32, 131, 218, 1287
AlwNI CAGNNNCTG 1 cut(s) 1217
Ama87I CYCGRG 1 cut(s) 849
Aor51HI AGCGCT 1 cut(s) 82
AoxI GGCC 3 cut(s) 303, 413, 1184
ApaLI GTGCAC 1 cut(s) 809
ApeKI GCWGC 3 cut(s) 440, 1106, 1290
ApoI RAATTY 2 cut(s) 17, 327
ArsI GACNNNNNNTTYG 2 cut(s) 258, 290
Asp700I GAANNNNTTC 3 cut(s) 585, 688, 1057
AspA2I CCTAGG 2 cut(s) 313, 1274
AspLEI GCGC 1 cut(s) 83
AspS9I GGNCC 3 cut(s) 974, 1184, 1214
AsuHPI GGTGA 2 cut(s) 116, 302
AvaI CYCGRG 1 cut(s) 849
AvaII GGWCC 2 cut(s) 974, 1214
AvrII CCTAGG 2 cut(s) 313, 1274
BaeGI GKGCMC 1 cut(s) 813
BarI GAAGNNNNNNTAC 2 cut(s) 1128, 1160
BbrPI CACGTG 1 cut(s) 134
BbsI GAAGAC 1 cut(s) 741
Bbv12I GWGCWC 2 cut(s) 813, 934
BbvI GCAGC 3 cut(s) 427, 1118, 1277
BccI CCATC 4 cut(s) 137, 598, 1027, 1304
BciT130I CCWGG 1 cut(s) 984
BciVI GTATCC 1 cut(s) 1201
BcoDI GTCTC 2 cut(s) 98, 772
BfaI CTAG 3 cut(s) 314, 357, 1275
BfmI CTRYAG 1 cut(s) 1008
BfoI RGCGCY 1 cut(s) 84
BfuI GTATCC 1 cut(s) 1201
BisI GCNGC 3 cut(s) 441, 1107, 1291
BlnI CCTAGG 2 cut(s) 313, 1274
BlsI GCNGC 3 cut(s) 442, 1108, 1292
Bme1390I CCNGG 1 cut(s) 984
Bme18I GGWCC 2 cut(s) 974, 1214
BmeT110I CYCGRG 1 cut(s) 849
BmgBI CACGTC 1 cut(s) 980
BmgT120I GGNCC 3 cut(s) 974, 1184, 1214
BmrFI CCNGG 1 cut(s) 984
BmsI GCATC 2 cut(s) 85, 312
BpiI GAAGAC 1 cut(s) 741
BpmI CTGGAG 3 cut(s) 120, 714, 810
Bpu10I CCTNAGC 1 cut(s) 300
BpuEI CTTGAG 2 cut(s) 1211, 1264
Bsa29I ATCGAT 1 cut(s) 616
BsaAI YACGTR 1 cut(s) 134
BsaI GGTCTC 1 cut(s) 98
BsaJI CCNNGG 3 cut(s) 42, 313, 1274
Bsc4I CCNNNNNNNGG 1 cut(s) 983
Bse1I ACTGG 1 cut(s) 667
BseBI CCWGG 1 cut(s) 984
BseCI ATCGAT 1 cut(s) 616
BseDI CCNNGG 3 cut(s) 42, 313, 1274
BseGI GGATG 3 cut(s) 324, 590, 757
BseLI CCNNNNNNNGG 1 cut(s) 983
BseMII CTCAG 5 cut(s) 159, 177, 953, 1194, 1209
BseNI ACTGG 1 cut(s) 667
BseRI GAGGAG 2 cut(s) 503, 528
BseSI GKGCMC 1 cut(s) 813
BseXI GCAGC 3 cut(s) 427, 1118, 1277
BsgI GTGCAG 2 cut(s) 1125, 1276
BshFI GGCC 3 cut(s) 305, 415, 1186
BshVI ATCGAT 1 cut(s) 616
BsiHKAI GWGCWC 2 cut(s) 813, 934
BsiHKCI CYCGRG 1 cut(s) 849
BslFI GGGAC 1 cut(s) 816
BslI CCNNNNNNNGG 1 cut(s) 983
BsmAI GTCTC 2 cut(s) 98, 772
BsmFI GGGAC 1 cut(s) 816
BsmI GAATGC 2 cut(s) 35, 1136
BsnI GGCC 3 cut(s) 305, 415, 1186
Bso31I GGTCTC 1 cut(s) 98
BsoBI CYCGRG 1 cut(s) 849
Bsp1286I GDGCHC 2 cut(s) 813, 934
Bsp1407I TGTACA 1 cut(s) 702
Bsp143I GATC 6 cut(s) 37, 136, 189, 223, 617, 1279
BspACI CCGC 1 cut(s) 283
BspANI GGCC 3 cut(s) 305, 415, 1186
BspCNI CTCAG 5 cut(s) 160, 178, 954, 1193, 1210
BspDI ATCGAT 1 cut(s) 616
BspPI GGATC 4 cut(s) 32, 131, 218, 1287
BspTNI GGTCTC 1 cut(s) 98
BsrGI TGTACA 1 cut(s) 702
BsrI ACTGG 1 cut(s) 667
BssECI CCNNGG 3 cut(s) 42, 313, 1274
BssMI GATC 6 cut(s) 37, 136, 189, 223, 617, 1279
BssT1I CCWWGG 3 cut(s) 42, 313, 1274
Bst2UI CCWGG 1 cut(s) 984
Bst4CI ACNGT 4 cut(s) 60, 564, 1012, 1158
Bst6I CTCTTC 2 cut(s) 591, 621
BstAUI TGTACA 1 cut(s) 702
BstBAI YACGTR 1 cut(s) 134
BstC8I GCNNGC 4 cut(s) 54, 203, 354, 953
BstDEI CTNAG 6 cut(s) 168, 186, 300, 962, 1180, 1218
BstF5I GGATG 3 cut(s) 324, 590, 757
BstH2I RGCGCY 1 cut(s) 84
BstHHI GCGC 1 cut(s) 83
BstKTI GATC 6 cut(s) 40, 139, 192, 226, 620, 1282
BstMAI GTCTC 2 cut(s) 98, 772
BstMBI GATC 6 cut(s) 37, 136, 189, 223, 617, 1279
BstMWI GCNNNNNNNGC 1 cut(s) 644
BstNI CCWGG 1 cut(s) 984
BstNSI RCATGY 3 cut(s) 52, 751, 955
BstSCI CCNGG 1 cut(s) 982
BstSFI CTRYAG 1 cut(s) 1008
BstSLI GKGCMC 1 cut(s) 813
BstV1I GCAGC 3 cut(s) 427, 1118, 1277
BstV2I GAAGAC 1 cut(s) 741
BstX2I RGATCY 1 cut(s) 223
BstYI RGATCY 1 cut(s) 223
Bsu15I ATCGAT 1 cut(s) 616
BsuI GTATCC 1 cut(s) 1201
BsuRI GGCC 3 cut(s) 305, 415, 1186
BsuTUI ATCGAT 1 cut(s) 616
BtgZI GCGATG 1 cut(s) 654
BtrI CACGTC 1 cut(s) 980
BtsCI GGATG 3 cut(s) 324, 590, 757
BtsI GCAGTG 1 cut(s) 873
BtsIMutI CAGTG 2 cut(s) 56, 873
Cac8I GCNNGC 4 cut(s) 54, 203, 354, 953
CaiI CAGNNNCTG 1 cut(s) 1217
CfoI GCGC 1 cut(s) 83
Cfr13I GGNCC 3 cut(s) 974, 1184, 1214
ClaI ATCGAT 1 cut(s) 616
Csp6I GTAC 3 cut(s) 519, 703, 1096
CspCI CAANNNNNGTGG 2 cut(s) 41, 76
CviAII CATG 5 cut(s) 49, 739, 748, 952, 1300
CviQI GTAC 3 cut(s) 519, 703, 1096
DdeI CTNAG 6 cut(s) 168, 186, 300, 962, 1180, 1218
DpnI GATC 6 cut(s) 39, 138, 191, 225, 619, 1281
DpnII GATC 6 cut(s) 37, 136, 189, 223, 617, 1279
Eam1104I CTCTTC 2 cut(s) 591, 621
EarI CTCTTC 2 cut(s) 591, 621
Eco130I CCWWGG 3 cut(s) 42, 313, 1274
Eco147I AGGCCT 1 cut(s) 415
Eco31I GGTCTC 1 cut(s) 98
Eco47I GGWCC 2 cut(s) 974, 1214
Eco47III AGCGCT 1 cut(s) 82
Eco57I CTGAAG 5 cut(s) 569, 783, 880, 881, 1187
Eco72I CACGTG 1 cut(s) 134
Eco88I CYCGRG 1 cut(s) 849
EcoO109I RGGNCCY 1 cut(s) 1214
EcoRII CCWGG 1 cut(s) 982
EcoT14I CCWWGG 3 cut(s) 42, 313, 1274
EcoT22I ATGCAT 1 cut(s) 35
ErhI CCWWGG 3 cut(s) 42, 313, 1274
FaeI CATG 5 cut(s) 52, 742, 751, 955, 1303
FalI AAGNNNNNCTT 2 cut(s) 570, 602
FaqI GGGAC 1 cut(s) 816
FatI CATG 5 cut(s) 48, 738, 747, 951, 1299
Fnu4HI GCNGC 3 cut(s) 441, 1107, 1291
FokI GGATG 3 cut(s) 331, 577, 744
Fsp4HI GCNGC 3 cut(s) 441, 1107, 1291
FspBI CTAG 3 cut(s) 314, 357, 1275
GlaI GCGC 1 cut(s) 82
GluI GCNGC 3 cut(s) 441, 1107, 1291
GsuI CTGGAG 3 cut(s) 120, 714, 810
HaeII RGCGCY 1 cut(s) 84
HaeIII GGCC 3 cut(s) 305, 415, 1186
HhaI GCGC 1 cut(s) 83
Hin1II CATG 5 cut(s) 52, 742, 751, 955, 1303
Hin6I GCGC 1 cut(s) 81
HinP1I GCGC 1 cut(s) 81
HindIII AAGCTT 1 cut(s) 463
HinfI GANTC 7 cut(s) 581, 716, 754, 957, 996, 1198, 1270
HphI GGTGA 2 cut(s) 116, 302
Hpy166II GTNNAC 5 cut(s) 124, 705, 745, 780, 811
Hpy188I TCNGA 1 cut(s) 549
Hpy8I GTNNAC 5 cut(s) 124, 705, 745, 780, 811
Hpy99I CGWCG 1 cut(s) 197
HpyAV CCTTC 5 cut(s) 169, 358, 602, 856, 1130
HpyCH4III ACNGT 4 cut(s) 60, 564, 1012, 1158
HpyCH4IV ACGT 2 cut(s) 133, 979
HpyCH4V TGCA 6 cut(s) 33, 52, 325, 811, 1106, 1293
HpyF10VI GCNNNNNNNGC 1 cut(s) 644
HpyF3I CTNAG 6 cut(s) 168, 186, 300, 962, 1180, 1218
HpySE526I ACGT 2 cut(s) 133, 979
Hsp92II CATG 5 cut(s) 52, 742, 751, 955, 1303
HspAI GCGC 1 cut(s) 81
Kzo9I GATC 6 cut(s) 37, 136, 189, 223, 617, 1279
LmnI GCTCC 1 cut(s) 1287
Lsp1109I GCAGC 3 cut(s) 427, 1118, 1277
LweI GCATC 2 cut(s) 85, 312
MaeI CTAG 3 cut(s) 314, 357, 1275
MaeII ACGT 2 cut(s) 133, 979
MaeIII GTNAC 2 cut(s) 368, 1143
MalI GATC 6 cut(s) 39, 138, 191, 225, 619, 1281
MboI GATC 6 cut(s) 37, 136, 189, 223, 617, 1279
MboII GAAGA 6 cut(s) 104, 578, 638, 746, 1193, 1268
MfeI CAATTG 1 cut(s) 383
MflI RGATCY 1 cut(s) 223
MhlI GDGCHC 2 cut(s) 813, 934
MluCI AATT 3 cut(s) 17, 327, 383
MnlI CCTC 9 cut(s) 137, 481, 506, 509, 622, 659, 1134, 1161, 1228
Mph1103I ATGCAT 1 cut(s) 35
MroXI GAANNNNTTC 3 cut(s) 585, 688, 1057
MseI TTAA 2 cut(s) 633, 912
MslI CAYNNNNRTG 1 cut(s) 1298
MspA1I CMGCKG 1 cut(s) 283
MspR9I CCNGG 1 cut(s) 984
MunI CAATTG 1 cut(s) 383
Mva1269I GAATGC 2 cut(s) 35, 1136
MvaI CCWGG 1 cut(s) 984
MwoI GCNNNNNNNGC 1 cut(s) 644
NdeII GATC 6 cut(s) 37, 136, 189, 223, 617, 1279
NlaIII CATG 5 cut(s) 52, 742, 751, 955, 1303
NsiI ATGCAT 1 cut(s) 35
NspI RCATGY 3 cut(s) 52, 751, 955
PaeI GCATGC 1 cut(s) 955
PceI AGGCCT 1 cut(s) 415
PciI ACATGT 1 cut(s) 747
PctI GAATGC 2 cut(s) 35, 1136
PdmI GAANNNNTTC 3 cut(s) 585, 688, 1057
PfeI GAWTC 7 cut(s) 581, 716, 754, 957, 996, 1198, 1270
PflFI GACNNNGTC 1 cut(s) 978
PflMI CCANNNNNTGG 1 cut(s) 983
PkrI GCNGC 3 cut(s) 442, 1108, 1292
PmaCI CACGTG 1 cut(s) 134
PmlI CACGTG 1 cut(s) 134
Ppu21I YACGTR 1 cut(s) 134
PpuMI RGGWCCY 1 cut(s) 1214
PscI ACATGT 1 cut(s) 747
PsiI TTATAA 1 cut(s) 947
Psp5II RGGWCCY 1 cut(s) 1214
Psp6I CCWGG 1 cut(s) 982
PspCI CACGTG 1 cut(s) 134
PspGI CCWGG 1 cut(s) 982
PspPI GGNCC 3 cut(s) 974, 1184, 1214
PspPPI RGGWCCY 1 cut(s) 1214
PstNI CAGNNNCTG 1 cut(s) 1217
PsuI RGATCY 1 cut(s) 223
PsyI GACNNNGTC 1 cut(s) 978
RsaI GTAC 3 cut(s) 520, 704, 1097
RsaNI GTAC 3 cut(s) 519, 703, 1096
RseI CAYNNNNRTG 1 cut(s) 1298
SaqAI TTAA 2 cut(s) 633, 912
SatI GCNGC 3 cut(s) 441, 1107, 1291
Sau3AI GATC 6 cut(s) 37, 136, 189, 223, 617, 1279
Sau96I GGNCC 3 cut(s) 974, 1184, 1214
ScrFI CCNGG 1 cut(s) 984
SduI GDGCHC 2 cut(s) 813, 934
SfaNI GCATC 2 cut(s) 85, 312
SfcI CTRYAG 1 cut(s) 1008
SinI GGWCC 2 cut(s) 974, 1214
SmiMI CAYNNNNRTG 1 cut(s) 1298
SmlI CTYRAG 2 cut(s) 1226, 1243
SmoI CTYRAG 2 cut(s) 1226, 1243
SphI GCATGC 1 cut(s) 955
Sse9I AATT 3 cut(s) 17, 327, 383
SseBI AGGCCT 1 cut(s) 415
SsiI CCGC 1 cut(s) 283
SspMI CTAG 3 cut(s) 314, 357, 1275
StuI AGGCCT 1 cut(s) 415
StyD4I CCNGG 1 cut(s) 982
StyI CCWWGG 3 cut(s) 42, 313, 1274
TaaI ACNGT 4 cut(s) 60, 564, 1012, 1158
TaiI ACGT 2 cut(s) 136, 982
TaqI TCGA 2 cut(s) 616, 999
TasI AATT 3 cut(s) 17, 327, 383
TatI WGTACW 2 cut(s) 702, 1095
TfiI GAWTC 7 cut(s) 581, 716, 754, 957, 996, 1198, 1270
Tru1I TTAA 2 cut(s) 633, 912
Tru9I TTAA 2 cut(s) 633, 912
TscAI CASTG 2 cut(s) 63, 873
TseI GCWGC 3 cut(s) 440, 1106, 1290
TspDTI ATGAA 5 cut(s) 42, 188, 411, 657, 1269
TspGWI ACGGA 1 cut(s) 562
TspRI CASTG 2 cut(s) 63, 873
Tth111I GACNNNGTC 1 cut(s) 978
Van91I CCANNNNNTGG 1 cut(s) 983
VneI GTGCAC 1 cut(s) 809
VpaK11BI GGWCC 2 cut(s) 974, 1214
XapI RAATTY 2 cut(s) 17, 327
XceI RCATGY 3 cut(s) 52, 751, 955
XmaJI CCTAGG 2 cut(s) 313, 1274
XmnI GAANNNNTTC 3 cut(s) 585, 688, 1057
XspI CTAG 3 cut(s) 314, 357, 1275
Zsp2I ATGCAT 1 cut(s) 35
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.