Rw4G016160

protein FAR1-RELATED SEQUENCE

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
Physical Location & Seq
Forward (+)
37088786 .. 37092369
3584 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G016160.1

Sequence Viewer

Length: 2049 bp
ATGTCAACTAGTTTGATGAAACCCAAGGATATGCTGACTGCTGTCAAGAAACAGGATAAAGAAAATGTAACAATTATGAAGACAATATATAATGCCAGAAGAGTACATCGGACAAAGGTTATGGCTGGAAGATCACAAATGCAATGTTTGCTACATAAGTTGAGGGAACACAATTATATTGAGCATCACAGGAGTGACGGTGATATCATCACTGACTTGTTTTGGTTTCATCCTTATTGTCTTCAGATTTTACGTACATTTCCACATGTTCTTATCATGGACTGCACCTACAAGACAAATAGATATTGTTTTCCTCTCTTTGAGATTGTCGGGGTGACATCTACTGAGAAGACCTTCAATGTTGCATTTGTTTATATGTCAAGAGAGGCGGAAGACAATTACACATGGGCTTTGAGTAAATTGAAGACTCTTTTGCGTGATGACTGTACTCCGGGTGTTATTGTGACTGATCGAGAATTAGCGCTAATGAATAGCATTAGCAAATTATTTCCTGGTTCTCGACATCTCCTGTGTAAATGGCATATCAATAAGAACGTGATGAAAGAGTGTAAGAAAAAGTTTGCAACGAAAGAAGGGTGGGATGCATTTAATGGTGCTTGGAACACTGTTGTTAGTTCTACAACTGAGGGTGAGTATTGGAAAAATCTCAAGGAATTAGAGTTTAAATTTAGTACATATCCCAATGAACTTCAGTATGTGAAGAGCAGTTGGTTGGACAACTACAAAGAACGATTTGTGGTTGCATGGACAAATACTTGCATGCACATCGGTACCACTACTTCAAATTGGGTGGAAAGTGCACATTCAAAGCTAAAGAAACAACTTAGTTCTAGCCAGTTGGACTTTAATATTTCATGGGACAATATACATTCGTTGATGGAGTTGCATCATACTGATATCAAGGCAACTTTTGAGAAGAGTCGATGTTTCCTGCAACATGATTTCAAGCATGACTATTTGAAGGAATTGATAAGTTATGTATCGATTACAGCTTTGAACAAAATAGTGTGTGAAGCTAATAGGCCTGATAATATTAAAGACTTGGCATGTTGTGGTTGTACTATACGTGTTACTCATGGTTTGCCATGTGCACATGAGATTGCTGAGTACAAACGCTCTAATAAGCCAATTCCAATTAATGCGGTTCACAGGCATTGGAGAAAATTAGGTGTCGATCAACCCATGAATACTAGTGATACCGAAGAAAAGGTTCCAGTAAAACAACATATGAATCCAGGTAGTACATTCCTTAACGAACCTGCAGAAAGAGTGAAGACAAAAGGTCGTCCACGCAAAATTGACACTAGTACTTGTCGTTTGCCATCCGCATGGGAGATTGATAATGTTCTTTCTAGTCAGGACAATAACTCACTTTCACCTGCAGTTTATGAAGTTGGTCAAGATGTTCCCCATGGTCCTATTCTTCCTGTTCATCATACTACAGAAAATAAAAAACCAAAAGATGTTCCTAATAAAATTCAGAGCCCAAAAGATTCTACATTTGCACTTACAACCAAATATAATTGCCAATTCCGAGTTGGAATTCAGCCATACATTATTGGCGCATATGATGTTGAATCTGATGGCAATTGTGGTTATAGAGCTGTGGCTTCGGCAATGGTATTTGGTCGAAAATCTTGGCGTCGAGTTCGTAGGGATTTATTGAACGAGTTAGAGAGCATGCCACAATTGTATGAAAGTTTCTTTGGTACTAAAGAGGTTAAGAAGGTTAAGGATGCACTTAACCATTATAGCTCTGGGAGCGCACCTAAAAGATGTTGGATGTATTTCCCAGAAATGGGGCATTTGATTGCAACTTGTTATGGTGTGGTGGTGATCGATTTATCAGATGGGCAATGCATAACATTTCTTCCTCTTATGGAACACCATAGTGGACATTTCAGTAGCAATGAGCTTCAAGAGATTGGAATTGGTCATGTGAATAGCACAGGCAGACAAAAAGGGAACCTATATCTAAGATTGTTGTTTGAGTTAGTCTCCTATGATATTACGGATCATCCCCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

682

Amino Acids

78.53

Weight (kDa)

8.78

Isoelectric Point (pI)

44.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ZSWIM1-3_RNaseH-like PF21056 77 - 175 2.7e-10 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE PF10551 90 - 185 1.5e-26 MULE transposase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000143)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G76710 AT1G76710 AT1G76710 AT1G76710
fragaria_vesca FvH4_1g20063 FvH4_2g15231 FvH4_3g04011 FvH4_3g28681 FvH4_4g01411 FvH4_4g10181 FvH4_4g15922 FvH4_4g16651 FvH4_4g16652 FvH4_5g13892 FvH4_5g13893 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g25511 FvH4_6g12551 FvH4_6g12552 FvH4_6g38841 FvH4_7g04391
malus_domestica MD05G1031300.v1.1 MD05G1031400.v1.1 MD05G1031500.v1.1 MD08G1164400.v1.1 MD10G1032900.v1.1 MD10G1033000.v1.1 MD10G1033100.v1.1
prunus_persica Prupe.3G240700_v2.0.a1 Prupe.7G144600_v2.0.a1 Prupe.8G038500_v2.0.a1 Prupe.8G038500_v2.0.a1
pyrus_communis pycom05g02250 pycom05g02260 pycom05g02270 pycom05g02280 pycom08g14160 pycom10g02100 pycom10g02110 pycom10g02130
rosa_chinensis RchiOBHm_Chr1g0329481 RchiOBHm_Chr1g0329491 RchiOBHm_Chr1g0341531 RchiOBHm_Chr3g0464811 RchiOBHm_Chr3g0494701 RchiOBHm_Chr3g0497501 RchiOBHm_Chr4g0385841 RchiOBHm_Chr5g0061181 RchiOBHm_Chr6g0263001 RchiOBHm_Chr7g0193111 RchiOBHm_Chr7g0206281 RchiOBHm_Chr7g0206311
rosa_laevigata RLG00000018908 RLG00000028528 RLG00000028803 RLG00000029882 RLG00000029883 RLG00000030361
rosa_multiflora Rmu_co8196328.1_g000001 Rmu_co8259135.1_g000001 Rmu_co8269185.1_g000001 Rmu_sc0000076.1_g000019 Rmu_sc0000311.1_g000007 Rmu_sc0000429.1_g000038 Rmu_sc0000429.1_g000039 Rmu_sc0000429.1_g000040 Rmu_sc0000511.1_g000005 Rmu_sc0000539.1_g000054 Rmu_sc0000566.1_g000039 Rmu_sc0000805.1_g000032 Rmu_sc0000870.1_g000073 Rmu_sc0000870.1_g000074 Rmu_sc0001010.1_g000018 Rmu_sc0001083.1_g000013 Rmu_sc0001114.1_g000011 Rmu_sc0001702.1_g000027 Rmu_sc0001779.1_g000012 Rmu_sc0002923.1_g000036 Rmu_sc0003242.1_g000011 Rmu_sc0003291.1_g000036 Rmu_sc0003393.1_g000012 Rmu_sc0003872.1_g000016 Rmu_sc0003872.1_g000017 Rmu_sc0003872.1_g000018 Rmu_sc0004084.1_g000020 Rmu_sc0004386.1_g000005 Rmu_sc0004622.1_g000005 Rmu_sc0004742.1_g000021 Rmu_sc0004755.1_g000020 Rmu_sc0004805.1_g000036 Rmu_sc0005065.1_g000006 Rmu_sc0005177.1_g000004 Rmu_sc0006373.1_g000003 Rmu_sc0006373.1_g000004 Rmu_sc0007121.1_g000002 Rmu_sc0007943.1_g000003 Rmu_sc0010368.1_g000006 Rmu_sc0010543.1_g000001 Rmu_sc0012591.1_g000006 Rmu_sc0013504.1_g000009 Rmu_sc0015025.1_g000001 Rmu_sc0016170.1_g000001 Rmu_sc0017156.1_g000001 Rmu_sc0026439.1_g000001
rosa_roxburghii Rroxscaffold_175G00432280 Rroxscaffold_1G00030190 Rroxscaffold_1G00030880 Rroxscaffold_2G00090520 Rroxscaffold_3G00227940 Rroxscaffold_3G00233400 Rroxscaffold_3G00238500 Rroxscaffold_3G00251650 Rroxscaffold_4G00301570 Rroxscaffold_4G00321040 Rroxscaffold_5G00350880 Rroxscaffold_7G00184400
rosa_rugosa Rorug01G0080800 Rorug01G0080900 Rorug01G0193900 Rorug02G0275900 Rorug02G0275900 Rorug02G0275900 Rorug02G0305400 Rorug02G0311800 Rorug02G0350400 Rorug02G0381300 Rorug03G0136700 Rorug03G0181900 Rorug03G0268000 Rorug04G0301600 Rorug05G0175100 Rorug05G0250700 Rorug05G0298200 Rorug05G0596000 Rorug06G0029500 Rorug07G0094300 Rorug07G0094300 Rorug07G0095400 Rorug07G0140100
rosa_samantha Rh1AG099200 Rh1AG190500 Rh1BG078900 Rh1BG079000 Rh1BG079100 Rh1CG084600 Rh1CG084700 Rh1CG095300 Rh1CG175900 Rh1DG103300 Rh1DG150400 Rh2AG079300 Rh2AG272400 Rh2AG464800 Rh2AG507400 Rh2DG078300 Rh2DG078400 Rh3CG206900 Rh3CG295400 Rh3DG206800 Rh3DG356200 Rh4CG071500 Rh4CG179200 Rh4DG064700 Rh5CG362400 Rh7AG212300 Rh7AG226200 Rh7BG222200
rosa_wichuraiana Rw0G009990 Rw0G011260 Rw0G011270 Rw0G012910 Rw0G013740 Rw1G007740 Rw1G013050 Rw1G014230 Rw2G014270 Rw3G012720 Rw3G028110 Rw4G006630 Rw4G015270 Rw4G016160 Rw4G031380 Rw5G011440 Rw5G029180 Rw5G048360 Rw5G048430 Rw5G048780 Rw6G005250 Rw6G006390 Rw7G002840 Rw7G014080 Rw7G019650 Rw7G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1408
Acc36I ACCTGC 2 cut(s) 1288, 1408
Acc65I GGTACC 1 cut(s) 791
AccB1I GGYRCC 1 cut(s) 791
AciI CCGC 3 cut(s) 389, 1163, 1347
AclWI GGATC 1 cut(s) 2043
AcsI RAATTY 3 cut(s) 686, 1497, 1563
AcuI CTGAAG 2 cut(s) 227, 695
AcyI GRCGYC 1 cut(s) 1663
AfeI AGCGCT 1 cut(s) 483
AfiI CCNNNNNNNGG 2 cut(s) 1819, 1820
AflIII ACRYGT 2 cut(s) 265, 1087
AhdI GACNNNNNGTC 1 cut(s) 1302
AhlI ACTAGT 3 cut(s) 8, 1211, 1325
AjnI CCWGG 2 cut(s) 511, 1255
AjuI GAANNNNNNNTTGG 2 cut(s) 1710, 1742
AleI CACNNNNGTG 2 cut(s) 192, 1911
AluBI AGCT 6 cut(s) 832, 1013, 1037, 1625, 1776, 1936
AluI AGCT 6 cut(s) 832, 1013, 1037, 1625, 1776, 1936
Alw21I GWGCWC 2 cut(s) 823, 1114
Alw26I GTCTC 1 cut(s) 2023
Alw44I GTGCAC 2 cut(s) 819, 1110
AlwI GGATC 1 cut(s) 2043
Aor51HI AGCGCT 1 cut(s) 483
AoxI GGCC 1 cut(s) 1043
ApaLI GTGCAC 2 cut(s) 819, 1110
ApoI RAATTY 3 cut(s) 686, 1497, 1563
AseI ATTAAT 1 cut(s) 1158
Asp700I GAANNNNTTC 2 cut(s) 353, 1230
Asp718I GGTACC 1 cut(s) 791
AspLEI GCGC 3 cut(s) 484, 1586, 1787
AspS9I GGNCC 1 cut(s) 1436
AsuC2I CCSGG 1 cut(s) 453
AsuHPI GGTGA 5 cut(s) 212, 346, 662, 1389, 1867
AvaII GGWCC 1 cut(s) 1436
BaeGI GKGCMC 2 cut(s) 823, 1114
BaeI ACNNNNGTAYC 2 cut(s) 775, 808
BanI GGYRCC 1 cut(s) 791
BanII GRGCYC 1 cut(s) 1508
BarI GAAGNNNNNNTAC 2 cut(s) 784, 816
BbsI GAAGAC 6 cut(s) 86, 233, 356, 399, 431, 1301
Bbv12I GWGCWC 2 cut(s) 823, 1114
BccI CCATC 4 cut(s) 892, 1351, 1598, 1865
BcgI CGANNNNNNTGC 2 cut(s) 769, 803
BciT130I CCWGG 2 cut(s) 513, 1257
BcnI CCSGG 1 cut(s) 453
BcoDI GTCTC 1 cut(s) 2023
BcuI ACTAGT 3 cut(s) 8, 1211, 1325
BfaI CTAG 5 cut(s) 9, 852, 1212, 1326, 1374
BfmI CTRYAG 3 cut(s) 1281, 1401, 1461
BfoI RGCGCY 1 cut(s) 485
BfuAI ACCTGC 2 cut(s) 1288, 1408
BmcAI AGTACT 1 cut(s) 1330
Bme1390I CCNGG 3 cut(s) 453, 513, 1257
Bme18I GGWCC 1 cut(s) 1436
BmeRI GACNNNNNGTC 1 cut(s) 1302
BmgT120I GGNCC 1 cut(s) 1436
BmiI GGNNCC 3 cut(s) 793, 1233, 1988
BmrFI CCNGG 3 cut(s) 453, 513, 1257
BmsI GCATC 4 cut(s) 193, 592, 916, 1747
BoxI GACNNNNGTC 1 cut(s) 41
BpiI GAAGAC 6 cut(s) 86, 233, 356, 399, 431, 1301
BplI GAGNNNNNCTC 2 cut(s) 2003, 2035
BpuEI CTTGAG 1 cut(s) 653
BpuMI CCSGG 1 cut(s) 453
Bsa29I ATCGAT 2 cut(s) 1004, 1860
BsaAI YACGTR 2 cut(s) 254, 1088
BsaHI GRCGYC 1 cut(s) 1663
BsaJI CCNNGG 2 cut(s) 24, 1432
BsaXI ACNNNNNCTCC 2 cut(s) 184, 214
Bsc4I CCNNNNNNNGG 2 cut(s) 1819, 1820
Bse1I ACTGG 2 cut(s) 856, 1235
Bse3DI GCAATG 4 cut(s) 149, 1644, 1883, 1936
BseBI CCWGG 2 cut(s) 513, 1257
BseCI ATCGAT 2 cut(s) 1004, 1860
BseDI CCNNGG 2 cut(s) 24, 1432
BseGI GGATG 6 cut(s) 229, 607, 1343, 1762, 1809, 2038
BseLI CCNNNNNNNGG 2 cut(s) 1819, 1820
BseMI GCAATG 4 cut(s) 149, 1644, 1883, 1936
BseMII CTCAG 3 cut(s) 336, 636, 1116
BseNI ACTGG 2 cut(s) 856, 1235
BseSI GKGCMC 2 cut(s) 823, 1114
BsgI GTGCAG 1 cut(s) 268
BshFI GGCC 1 cut(s) 1045
BshNI GGYRCC 1 cut(s) 791
BshVI ATCGAT 2 cut(s) 1004, 1860
BsiHKAI GWGCWC 2 cut(s) 823, 1114
BsiSI CCGG 1 cut(s) 452
BslFI GGGAC 1 cut(s) 893
BslI CCNNNNNNNGG 2 cut(s) 1819, 1820
BsmAI GTCTC 1 cut(s) 2023
BsmFI GGGAC 1 cut(s) 893
BsnI GGCC 1 cut(s) 1045
Bsp1286I GDGCHC 3 cut(s) 823, 1114, 1508
Bsp143I GATC 5 cut(s) 131, 469, 1195, 1857, 2035
Bsp19I CCATGG 1 cut(s) 1432
BspACI CCGC 3 cut(s) 389, 1163, 1347
BspANI GGCC 1 cut(s) 1045
BspCNI CTCAG 3 cut(s) 337, 637, 1117
BspDI ATCGAT 2 cut(s) 1004, 1860
BspLI GGNNCC 3 cut(s) 793, 1233, 1988
BspMAI CTGCAG 2 cut(s) 1285, 1405
BspMI ACCTGC 2 cut(s) 1288, 1408
BspPI GGATC 1 cut(s) 2043
BspQI GCTCTTC 1 cut(s) 716
BspT107I GGYRCC 1 cut(s) 791
BsrDI GCAATG 4 cut(s) 149, 1644, 1883, 1936
BsrI ACTGG 2 cut(s) 856, 1235
BssECI CCNNGG 2 cut(s) 24, 1432
BssMI GATC 5 cut(s) 131, 469, 1195, 1857, 2035
BssNI GRCGYC 1 cut(s) 1663
BssT1I CCWWGG 2 cut(s) 24, 1432
Bst2UI CCWGG 2 cut(s) 513, 1257
Bst4CI ACNGT 3 cut(s) 200, 446, 628
Bst6I CTCTTC 3 cut(s) 94, 716, 932
BstACI GRCGYC 1 cut(s) 1663
BstAPI GCANNNNNTGC 1 cut(s) 148
BstBAI YACGTR 2 cut(s) 254, 1088
BstC8I GCNNGC 2 cut(s) 782, 1703
BstDEI CTNAG 5 cut(s) 345, 645, 845, 1125, 1997
BstDSI CCRYGG 1 cut(s) 1432
BstF5I GGATG 6 cut(s) 229, 607, 1343, 1762, 1809, 2038
BstH2I RGCGCY 1 cut(s) 485
BstHHI GCGC 3 cut(s) 484, 1586, 1787
BstKTI GATC 5 cut(s) 134, 472, 1198, 1860, 2038
BstMAI GTCTC 1 cut(s) 2023
BstMBI GATC 5 cut(s) 131, 469, 1195, 1857, 2035
BstMWI GCNNNNNNNGC 2 cut(s) 148, 1782
BstNI CCWGG 2 cut(s) 513, 1257
BstNSI RCATGY 4 cut(s) 269, 784, 1071, 1705
BstPAI GACNNNNGTC 1 cut(s) 41
BstSCI CCNGG 3 cut(s) 451, 511, 1255
BstSFI CTRYAG 3 cut(s) 1281, 1401, 1461
BstSLI GKGCMC 2 cut(s) 823, 1114
BstSNI TACGTA 1 cut(s) 254
BstV2I GAAGAC 6 cut(s) 86, 233, 356, 399, 431, 1301
BstXI CCANNNNNNTGG 1 cut(s) 1350
Bsu15I ATCGAT 2 cut(s) 1004, 1860
BsuRI GGCC 1 cut(s) 1045
BsuTUI ATCGAT 2 cut(s) 1004, 1860
BtgI CCRYGG 1 cut(s) 1432
BtsCI GGATG 6 cut(s) 229, 607, 1343, 1762, 1809, 2038
BtsIMutI CAGTG 2 cut(s) 210, 624
BveI ACCTGC 2 cut(s) 1288, 1408
Cac8I GCNNGC 2 cut(s) 782, 1703
CfoI GCGC 3 cut(s) 484, 1586, 1787
Cfr13I GGNCC 1 cut(s) 1436
ClaI ATCGAT 2 cut(s) 1004, 1860
CseI GACGC 1 cut(s) 1652
CspCI CAANNNNNGTGG 2 cut(s) 792, 827
DdeI CTNAG 5 cut(s) 345, 645, 845, 1125, 1997
DpnI GATC 5 cut(s) 133, 471, 1197, 1859, 2037
DpnII GATC 5 cut(s) 131, 469, 1195, 1857, 2035
DraI TTTAAA 1 cut(s) 685
DriI GACNNNNNGTC 1 cut(s) 1302
Eam1104I CTCTTC 3 cut(s) 94, 716, 932
Eam1105I GACNNNNNGTC 1 cut(s) 1302
EarI CTCTTC 3 cut(s) 94, 716, 932
EciI GGCGGA 1 cut(s) 404
Eco105I TACGTA 1 cut(s) 254
Eco130I CCWWGG 2 cut(s) 24, 1432
Eco147I AGGCCT 1 cut(s) 1045
Eco24I GRGCYC 1 cut(s) 1508
Eco32I GATATC 2 cut(s) 205, 919
Eco47I GGWCC 1 cut(s) 1436
Eco47III AGCGCT 1 cut(s) 483
Eco57I CTGAAG 2 cut(s) 227, 695
EcoRI GAATTC 1 cut(s) 1563
EcoRII CCWGG 2 cut(s) 511, 1255
EcoRV GATATC 2 cut(s) 205, 919
EcoT14I CCWWGG 2 cut(s) 24, 1432
EcoT22I ATGCAT 2 cut(s) 607, 1883
EcoT38I GRGCYC 1 cut(s) 1508
ErhI CCWWGG 2 cut(s) 24, 1432
FaqI GGGAC 1 cut(s) 893
FauNDI CATATG 2 cut(s) 1248, 1588
FokI GGATG 6 cut(s) 216, 614, 1330, 1769, 1816, 2025
FriOI GRGCYC 1 cut(s) 1508
FspBI CTAG 5 cut(s) 9, 852, 1212, 1326, 1374
GlaI GCGC 3 cut(s) 483, 1585, 1786
HaeII RGCGCY 1 cut(s) 485
HaeIII GGCC 1 cut(s) 1045
HapII CCGG 1 cut(s) 452
HgaI GACGC 1 cut(s) 1652
HhaI GCGC 3 cut(s) 484, 1586, 1787
Hin1I GRCGYC 1 cut(s) 1663
Hin6I GCGC 3 cut(s) 482, 1584, 1785
HinP1I GCGC 3 cut(s) 482, 1584, 1785
HincII GTYRAC 1 cut(s) 6
HindII GTYRAC 1 cut(s) 6
HinfI GANTC 5 cut(s) 427, 940, 1252, 1514, 1598
HpaII CCGG 1 cut(s) 452
HphI GGTGA 5 cut(s) 212, 346, 662, 1389, 1867
Hpy166II GTNNAC 6 cut(s) 6, 821, 1112, 1168, 1310, 1916
Hpy188I TCNGA 6 cut(s) 111, 246, 1503, 1556, 1603, 1870
Hpy188III TCNNGA 7 cut(s) 46, 381, 473, 519, 1379, 1421, 1940
Hpy8I GTNNAC 6 cut(s) 6, 821, 1112, 1168, 1310, 1916
Hpy99I CGWCG 1 cut(s) 1668
HpyAV CCTTC 4 cut(s) 364, 587, 976, 1741
HpyCH4III ACNGT 3 cut(s) 200, 446, 628
HpyCH4IV ACGT 3 cut(s) 253, 555, 1087
HpyF10VI GCNNNNNNNGC 2 cut(s) 148, 1782
HpyF3I CTNAG 5 cut(s) 345, 645, 845, 1125, 1997
HpySE526I ACGT 3 cut(s) 253, 555, 1087
Hsp92I GRCGYC 1 cut(s) 1663
HspAI GCGC 3 cut(s) 482, 1584, 1785
KpnI GGTACC 1 cut(s) 795
Kzo9I GATC 5 cut(s) 131, 469, 1195, 1857, 2035
LguI GCTCTTC 1 cut(s) 716
LmnI GCTCC 1 cut(s) 1782
LweI GCATC 4 cut(s) 193, 592, 916, 1747
MaeI CTAG 5 cut(s) 9, 852, 1212, 1326, 1374
MaeII ACGT 3 cut(s) 253, 555, 1087
MaeIII GTNAC 5 cut(s) 67, 194, 334, 463, 1090
MalI GATC 5 cut(s) 133, 471, 1197, 1859, 2037
MboI GATC 5 cut(s) 131, 469, 1195, 1857, 2035
MfeI CAATTG 2 cut(s) 1609, 1709
MhlI GDGCHC 3 cut(s) 823, 1114, 1508
MlyI GAGTC 2 cut(s) 421, 949
MmeI TCCRAC 4 cut(s) 714, 840, 1540, 1781
MnlI CCTC 6 cut(s) 156, 324, 379, 640, 1732, 1905
Mph1103I ATGCAT 2 cut(s) 607, 1883
MroXI GAANNNNTTC 2 cut(s) 353, 1230
MseI TTAA 9 cut(s) 609, 684, 867, 1056, 1158, 1272, 1743, 1752, 1764
MslI CAYNNNNRTG 3 cut(s) 192, 1348, 1911
MspI CCGG 1 cut(s) 452
MspR9I CCNGG 3 cut(s) 453, 513, 1257
MunI CAATTG 2 cut(s) 1609, 1709
MvaI CCWGG 2 cut(s) 513, 1257
MwoI GCNNNNNNNGC 2 cut(s) 148, 1782
NciI CCSGG 1 cut(s) 453
NcoI CCATGG 1 cut(s) 1432
NdeI CATATG 2 cut(s) 1248, 1588
NdeII GATC 5 cut(s) 131, 469, 1195, 1857, 2035
NlaIV GGNNCC 3 cut(s) 793, 1233, 1988
NmuCI GTSAC 3 cut(s) 194, 334, 463
NsiI ATGCAT 2 cut(s) 607, 1883
NspI RCATGY 4 cut(s) 269, 784, 1071, 1705
OliI CACNNNNGTG 2 cut(s) 192, 1911
PaeI GCATGC 2 cut(s) 784, 1705
PaqCI CACCTGC 1 cut(s) 1408
PceI AGGCCT 1 cut(s) 1045
PciI ACATGT 1 cut(s) 265
PciSI GCTCTTC 1 cut(s) 716
PdmI GAANNNNTTC 2 cut(s) 353, 1230
PfeI GAWTC 3 cut(s) 1252, 1514, 1598
PleI GAGTC 2 cut(s) 421, 948
PpsI GAGTC 2 cut(s) 421, 948
Ppu21I YACGTR 2 cut(s) 254, 1088
PscI ACATGT 1 cut(s) 265
PshAI GACNNNNGTC 1 cut(s) 41
PshBI ATTAAT 1 cut(s) 1158
Psp6I CCWGG 2 cut(s) 511, 1255
PspGI CCWGG 2 cut(s) 511, 1255
PspN4I GGNNCC 3 cut(s) 793, 1233, 1988
PspPI GGNCC 1 cut(s) 1436
PstI CTGCAG 2 cut(s) 1285, 1405
RseI CAYNNNNRTG 3 cut(s) 192, 1348, 1911
SapI GCTCTTC 1 cut(s) 716
SaqAI TTAA 9 cut(s) 609, 684, 867, 1056, 1158, 1272, 1743, 1752, 1764
Sau3AI GATC 5 cut(s) 131, 469, 1195, 1857, 2035
Sau96I GGNCC 1 cut(s) 1436
ScaI AGTACT 1 cut(s) 1330
SchI GAGTC 2 cut(s) 421, 949
ScrFI CCNGG 3 cut(s) 453, 513, 1257
SduI GDGCHC 3 cut(s) 823, 1114, 1508
SfaNI GCATC 4 cut(s) 193, 592, 916, 1747
SfcI CTRYAG 3 cut(s) 1281, 1401, 1461
SinI GGWCC 1 cut(s) 1436
SmiMI CAYNNNNRTG 3 cut(s) 192, 1348, 1911
SmlI CTYRAG 1 cut(s) 668
SmoI CTYRAG 1 cut(s) 668
SnaBI TACGTA 1 cut(s) 254
SpeI ACTAGT 3 cut(s) 8, 1211, 1325
SphI GCATGC 2 cut(s) 784, 1705
SseBI AGGCCT 1 cut(s) 1045
SsiI CCGC 3 cut(s) 389, 1163, 1347
SspI AATATT 2 cut(s) 871, 1054
SspMI CTAG 5 cut(s) 9, 852, 1212, 1326, 1374
StuI AGGCCT 1 cut(s) 1045
StyD4I CCNGG 3 cut(s) 451, 511, 1255
StyI CCWWGG 2 cut(s) 24, 1432
TaaI ACNGT 3 cut(s) 200, 446, 628
TaiI ACGT 3 cut(s) 256, 558, 1090
TaqI TCGA 8 cut(s) 472, 520, 943, 1004, 1194, 1651, 1666, 1860
TatI WGTACW 7 cut(s) 103, 446, 692, 1079, 1128, 1262, 1328
TfiI GAWTC 3 cut(s) 1252, 1514, 1598
Tru1I TTAA 9 cut(s) 609, 684, 867, 1056, 1158, 1272, 1743, 1752, 1764
Tru9I TTAA 9 cut(s) 609, 684, 867, 1056, 1158, 1272, 1743, 1752, 1764
TscAI CASTG 2 cut(s) 217, 631
TseFI GTSAC 3 cut(s) 194, 334, 463
Tsp45I GTSAC 3 cut(s) 194, 334, 463
TspGWI ACGGA 1 cut(s) 2048
TspRI CASTG 2 cut(s) 217, 631
VneI GTGCAC 2 cut(s) 819, 1110
VpaK11BI GGWCC 1 cut(s) 1436
VspI ATTAAT 1 cut(s) 1158
XapI RAATTY 3 cut(s) 686, 1497, 1563
XceI RCATGY 4 cut(s) 269, 784, 1071, 1705
XcmI CCANNNNNNNNNTGG 2 cut(s) 1556, 1775
XmnI GAANNNNTTC 2 cut(s) 353, 1230
XspI CTAG 5 cut(s) 9, 852, 1212, 1326, 1374
ZrmI AGTACT 1 cut(s) 1330
Zsp2I ATGCAT 2 cut(s) 607, 1883
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.