Rmu_sc0000076.1_g000019

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000076.1
OG0000143
Physical Location & Seq
Reverse (-)
79906 .. 83415
3510 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000076.1_g000019.1.cds

Sequence Viewer

Length: 2601 bp
atggagcatgtggctgtatcaacaagggttccatcaataagttatagtgtagagaacggaggtacaagggattacagtagtgaatttaaaacgattaagatattcaagagcaaagaagaattgataaaatgggctcgtgatgttgggagattgcatggttttgttattgtcacattgagatctgacagtggcaaaggcagtaagagacctagagttatattgggttgtgagaggagtggaaaatgtgatagccgaagtacatccaaaagaacaatgacggacaagtgcgtacgtcgacatacgggaactaagaagtgtgattgtcctttccggttaatgggcaagaagctagcggctggtgatgagtgggacctgagagtagtagaaggaatgcataatcatgaagcagggcacagtgggatgggccattcatttcaaggtagattatctcaagaggagaagtcattgttgaaggatatgtgtaaaacaggggagcagcctaaggagatattaagaacactaaaagagagggacgaacacaacaaatccacaggtaggacaatatacaatgaatatcaaagtttgaagcgtatacagaaacttgaggatgaaagttctcaattgcaacaattaatgagtaacgcagaggattacaatttcatcgagaagcacaggaatactagtccaaagattgacacagtcatggacttgtttttgacacacccaactagcttggaattgctacttgcatttccagctgttttgataatagagtccatatatcagaaggattggatgtgggcgacgttagagatttggggagttacgtcaactaataggatattttttgttgctttaggtatcctttcttcaaaacggaaaagtaattgtgaatgggccttaaattcattgagaggtgtaatggatgataatggtattgctatgcctgatattgtaattttacaagcatccaaagaagacaagatttacgtggccgcaatgaaagccattaacgacgtcttcagtacggctaaacttttgttatcttggtattccacctgtgataatgtggtagcatattgccggaatatatcagagttgaatgttgtggagcagcgttcctttaaaaagaagtggatgttattggtagcatcctccactgaagccgatttcgaacaacatttaatgcagctacgcaccgaattttttatttacccagaggtacttgaatatgcagacactttgttgaagccatataaggaaatgtttgtttcagcgtggacagatggagttatgcattttgggaatacagcactgttgatgtatggttctgtagtggtagagcaaaaagcaatcgacgcattttgggagcgtatgcatggcatgattgaggaagaccaagtggaggttaaagcttcgtttgtgaaatccttaacaaatgagtacaatgataaagatgggcgctcagagttgaaggaacttcatggctttatttccatttatgcattagatatgatctatgagcggtcgaccttgcttgagatagatgatggccatagtgagtgctgtagttgtgccataaaacgtacccatggcttaccatgtgcacatgaaattgcaaagtacaagaaagagggtcgacctattccacttgaatgcatcaattctcattggaggaaacttcacttggaacctttaagaaagaccggatcagagaccaatatggatgagaggatgaaacgacgtaggctaagtgaggagatgaatgcagatactcattctgctctacccttgctcgagattgtggaatctgaacctaatttaccgaatgctggtccgtctatagtgccctcaaaacaggagaggcagccagaggataaggtgtatggtatccagacaactaagcaacttgagttcatagatgtatgtccacttgtattgaggccatatatccttgatgtaaaggatgttgcaagagatggccattgcggttttagagctatagcatcatttatgggttacggtgaagaggttggatgggtgaaagtgcgggaggacttaacaaatgagcttatgatcaacgcagctccctatgcccaactctttggttcggatcaaagggttaatgagctatttaatgcattgacatattttgagagcatctgtttacagaagaaatattggatgactatgcctgacatgggtcatattatagcatcttgctataatgttgtactcatgcatttgtcttcagttcagtgctttacattctttccacttagaactgcacccacatcattctcaataccatcaactagagagattgttattggatttgtcgaagaacattttgttcaggtatatttgaaaacaggtcatccaatgcctcctccaactccagcgcccaccagaaagaatcctcatgtagcaacaaactgggaaagatttcatgaacaacgttccacagaatgggcaactctatacctcggtcgcatagagcatttcaaatccttacagcccgaggtcgtctcacgaaagaacccagttgtgcttgatattgattctttgccttctgtagacaatatggatttactattttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE

Protein Analysis

866

Amino Acids

99.2

Weight (kDa)

6.43

Isoelectric Point (pI)

44.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000143)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G76710 AT1G76710 AT1G76710 AT1G76710
fragaria_vesca FvH4_1g20063 FvH4_2g15231 FvH4_3g04011 FvH4_3g28681 FvH4_4g01411 FvH4_4g10181 FvH4_4g15922 FvH4_4g16651 FvH4_4g16652 FvH4_5g13892 FvH4_5g13893 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g25511 FvH4_6g12551 FvH4_6g12552 FvH4_6g38841 FvH4_7g04391
malus_domestica MD05G1031300.v1.1 MD05G1031400.v1.1 MD05G1031500.v1.1 MD08G1164400.v1.1 MD10G1032900.v1.1 MD10G1033000.v1.1 MD10G1033100.v1.1
prunus_persica Prupe.3G240700_v2.0.a1 Prupe.7G144600_v2.0.a1 Prupe.8G038500_v2.0.a1 Prupe.8G038500_v2.0.a1
pyrus_communis pycom05g02250 pycom05g02260 pycom05g02270 pycom05g02280 pycom08g14160 pycom10g02100 pycom10g02110 pycom10g02130
rosa_chinensis RchiOBHm_Chr1g0329481 RchiOBHm_Chr1g0329491 RchiOBHm_Chr1g0341531 RchiOBHm_Chr3g0464811 RchiOBHm_Chr3g0494701 RchiOBHm_Chr3g0497501 RchiOBHm_Chr4g0385841 RchiOBHm_Chr5g0061181 RchiOBHm_Chr6g0263001 RchiOBHm_Chr7g0193111 RchiOBHm_Chr7g0206281 RchiOBHm_Chr7g0206311
rosa_laevigata RLG00000018908 RLG00000028528 RLG00000028803 RLG00000029882 RLG00000029883 RLG00000030361
rosa_multiflora Rmu_co8196328.1_g000001 Rmu_co8259135.1_g000001 Rmu_co8269185.1_g000001 Rmu_sc0000076.1_g000019 Rmu_sc0000311.1_g000007 Rmu_sc0000429.1_g000038 Rmu_sc0000429.1_g000039 Rmu_sc0000429.1_g000040 Rmu_sc0000511.1_g000005 Rmu_sc0000539.1_g000054 Rmu_sc0000566.1_g000039 Rmu_sc0000805.1_g000032 Rmu_sc0000870.1_g000073 Rmu_sc0000870.1_g000074 Rmu_sc0001010.1_g000018 Rmu_sc0001083.1_g000013 Rmu_sc0001114.1_g000011 Rmu_sc0001702.1_g000027 Rmu_sc0001779.1_g000012 Rmu_sc0002923.1_g000036 Rmu_sc0003242.1_g000011 Rmu_sc0003291.1_g000036 Rmu_sc0003393.1_g000012 Rmu_sc0003872.1_g000016 Rmu_sc0003872.1_g000017 Rmu_sc0003872.1_g000018 Rmu_sc0004084.1_g000020 Rmu_sc0004386.1_g000005 Rmu_sc0004622.1_g000005 Rmu_sc0004742.1_g000021 Rmu_sc0004755.1_g000020 Rmu_sc0004805.1_g000036 Rmu_sc0005065.1_g000006 Rmu_sc0005177.1_g000004 Rmu_sc0006373.1_g000003 Rmu_sc0006373.1_g000004 Rmu_sc0007121.1_g000002 Rmu_sc0007943.1_g000003 Rmu_sc0010368.1_g000006 Rmu_sc0010543.1_g000001 Rmu_sc0012591.1_g000006 Rmu_sc0013504.1_g000009 Rmu_sc0015025.1_g000001 Rmu_sc0016170.1_g000001 Rmu_sc0017156.1_g000001 Rmu_sc0026439.1_g000001
rosa_roxburghii Rroxscaffold_175G00432280 Rroxscaffold_1G00030190 Rroxscaffold_1G00030880 Rroxscaffold_2G00090520 Rroxscaffold_3G00227940 Rroxscaffold_3G00233400 Rroxscaffold_3G00238500 Rroxscaffold_3G00251650 Rroxscaffold_4G00301570 Rroxscaffold_4G00321040 Rroxscaffold_5G00350880 Rroxscaffold_7G00184400
rosa_rugosa Rorug01G0080800 Rorug01G0080900 Rorug01G0193900 Rorug02G0275900 Rorug02G0275900 Rorug02G0275900 Rorug02G0305400 Rorug02G0311800 Rorug02G0350400 Rorug02G0381300 Rorug03G0136700 Rorug03G0181900 Rorug03G0268000 Rorug04G0301600 Rorug05G0175100 Rorug05G0250700 Rorug05G0298200 Rorug05G0596000 Rorug06G0029500 Rorug07G0094300 Rorug07G0094300 Rorug07G0095400 Rorug07G0140100
rosa_samantha Rh1AG099200 Rh1AG190500 Rh1BG078900 Rh1BG079000 Rh1BG079100 Rh1CG084600 Rh1CG084700 Rh1CG095300 Rh1CG175900 Rh1DG103300 Rh1DG150400 Rh2AG079300 Rh2AG272400 Rh2AG464800 Rh2AG507400 Rh2DG078300 Rh2DG078400 Rh3CG206900 Rh3CG295400 Rh3DG206800 Rh3DG356200 Rh4CG071500 Rh4CG179200 Rh4DG064700 Rh5CG362400 Rh7AG212300 Rh7AG226200 Rh7BG222200
rosa_wichuraiana Rw0G009990 Rw0G011260 Rw0G011270 Rw0G012910 Rw0G013740 Rw1G007740 Rw1G013050 Rw1G014230 Rw2G014270 Rw3G012720 Rw3G028110 Rw4G006630 Rw4G015270 Rw4G016160 Rw4G031380 Rw5G011440 Rw5G029180 Rw5G048360 Rw5G048430 Rw5G048780 Rw6G005250 Rw6G006390 Rw7G002840 Rw7G014080 Rw7G019650 Rw7G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1020
AccB7I CCANNNNNTGG 1 cut(s) 2469
AccBSI CCGCTC 1 cut(s) 1525
AccI GTMKAC 5 cut(s) 295, 592, 1529, 1639, 2577
AciI CCGC 5 cut(s) 353, 996, 1525, 1989, 2050
AclI AACGTT 1 cut(s) 2458
AclWI GGATC 2 cut(s) 1717, 2121
AcoI YGGCCR 3 cut(s) 993, 1552, 1981
AcsI RAATTY 3 cut(s) 83, 904, 1202
AcuI CTGAAG 3 cut(s) 1006, 1182, 2235
AcyI GRCGYC 1 cut(s) 1017
AfaI GTAC 9 cut(s) 64, 259, 291, 1027, 1224, 1445, 1588, 1625, 2235
AfiI CCNNNNNNNGG 6 cut(s) 337, 555, 1405, 1832, 2201, 2469
AhlI ACTAGT 1 cut(s) 680
AjuI GAANNNNNNNTTGG 2 cut(s) 1670, 1702
AluBI AGCT 9 cut(s) 349, 732, 758, 1192, 1415, 2000, 2071, 2087, 2131
AluI AGCT 9 cut(s) 349, 732, 758, 1192, 1415, 2000, 2071, 2087, 2131
Alw21I GWGCWC 1 cut(s) 1609
Alw26I GTCTC 3 cut(s) 199, 1709, 2533
Alw44I GTGCAC 1 cut(s) 1605
AlwI GGATC 2 cut(s) 1717, 2121
Ama87I CYCGRG 2 cut(s) 1796, 2519
AoxI GGCC 6 cut(s) 424, 897, 993, 1552, 1943, 1981
ApaLI GTGCAC 1 cut(s) 1605
ApeKI GCWGC 5 cut(s) 496, 1114, 1189, 1867, 2084
ApoI RAATTY 3 cut(s) 83, 904, 1202
AseI ATTAAT 1 cut(s) 632
Asp700I GAANNNNTTC 1 cut(s) 2445
AspLEI GCGC 2 cut(s) 1464, 2404
AspS9I GGNCC 4 cut(s) 370, 424, 897, 1835
AsuHPI GGTGA 3 cut(s) 371, 2036, 2053
AsuII TTCGAA 1 cut(s) 1173
AsuNHI GCTAGC 1 cut(s) 349
AvaI CYCGRG 2 cut(s) 1796, 2519
AvaII GGWCC 2 cut(s) 370, 1835
AxyI CCTNAGG 1 cut(s) 501
BaeGI GKGCMC 3 cut(s) 414, 1609, 1851
BalI TGGCCA 2 cut(s) 1554, 1983
BanII GRGCYC 1 cut(s) 136
BarI GAAGNNNNNNTAC 2 cut(s) 853, 885
BauI CACGAG 1 cut(s) 135
BbsI GAAGAC 4 cut(s) 984, 1012, 1401, 2241
Bbv12I GWGCWC 1 cut(s) 1609
BbvI GCAGC 5 cut(s) 508, 1126, 1201, 1879, 2096
BccI CCATC 8 cut(s) 40, 415, 1280, 1451, 1544, 1973, 2031, 2317
BceAI ACGGC 1 cut(s) 1044
BciVI GTATCC 2 cut(s) 872, 1901
BclI TGATCA 1 cut(s) 2076
BcoDI GTCTC 3 cut(s) 199, 1709, 2533
BcuI ACTAGT 1 cut(s) 680
BfaI CTAG 5 cut(s) 210, 350, 681, 729, 2316
BfmI CTRYAG 5 cut(s) 1332, 1567, 1842, 2001, 2574
BfoI RGCGCY 2 cut(s) 1465, 2405
BfuI GTATCC 2 cut(s) 872, 1901
BglII AGATCT 1 cut(s) 179
BisI GCNGC 7 cut(s) 354, 497, 996, 1115, 1190, 1868, 2085
BlsI GCNGC 7 cut(s) 355, 498, 997, 1116, 1191, 1869, 2086
Bme18I GGWCC 2 cut(s) 370, 1835
BmeT110I CYCGRG 2 cut(s) 1796, 2519
BmgT120I GGNCC 4 cut(s) 370, 424, 897, 1835
BmiI GGNNCC 3 cut(s) 30, 371, 1692
BmrI ACTGGG 2 cut(s) 2446, 2537
BmsI GCATC 6 cut(s) 977, 1160, 1668, 2015, 2169, 2225
BmtI GCTAGC 1 cut(s) 353
BmuI ACTGGG 2 cut(s) 2446, 2537
BoxI GACNNNNGTC 1 cut(s) 2202
BpiI GAAGAC 4 cut(s) 984, 1012, 1401, 2241
BplI GAGNNNNNCTC 2 cut(s) 2513, 2545
BpmI CTGGAG 1 cut(s) 2382
Bpu14I TTCGAA 1 cut(s) 1173
BpuEI CTTGAG 4 cut(s) 435, 623, 1559, 1931
BsaAI YACGTR 1 cut(s) 991
BsaHI GRCGYC 1 cut(s) 1017
BsaI GGTCTC 2 cut(s) 199, 1709
BsaJI CCNNGG 3 cut(s) 1591, 2485, 2520
BsaWI WCCGGW 2 cut(s) 330, 1706
Bsc4I CCNNNNNNNGG 6 cut(s) 337, 555, 1405, 1832, 2201, 2469
Bse1I ACTGG 2 cut(s) 2441, 2543
Bse21I CCTNAGG 1 cut(s) 501
Bse3DI GCAATG 2 cut(s) 1005, 1984
BseDI CCNNGG 3 cut(s) 1591, 2485, 2520
BseLI CCNNNNNNNGG 6 cut(s) 337, 555, 1405, 1832, 2201, 2469
BseMI GCAATG 2 cut(s) 1005, 1984
BseMII CTCAG 2 cut(s) 365, 1479
BseNI ACTGG 2 cut(s) 2441, 2543
BseRI GAGGAG 4 cut(s) 247, 470, 1772, 2379
BseSI GKGCMC 3 cut(s) 414, 1609, 1851
BseXI GCAGC 5 cut(s) 508, 1126, 1201, 1879, 2096
BsgI GTGCAG 1 cut(s) 2271
Bsh1285I CGRYCG 2 cut(s) 1529, 2491
BshFI GGCC 6 cut(s) 426, 899, 995, 1554, 1945, 1983
BsiEI CGRYCG 2 cut(s) 1529, 2491
BsiHKAI GWGCWC 1 cut(s) 1609
BsiHKCI CYCGRG 2 cut(s) 1796, 2519
BsiSI CCGG 3 cut(s) 331, 1084, 1707
BsiWI CGTACG 1 cut(s) 289
BslFI GGGAC 2 cut(s) 383, 545
BslI CCNNNNNNNGG 6 cut(s) 337, 555, 1405, 1832, 2201, 2469
BsmAI GTCTC 3 cut(s) 199, 1709, 2533
BsmBI CGTCTC 1 cut(s) 2533
BsmFI GGGAC 2 cut(s) 383, 545
BsmI GAATGC 4 cut(s) 396, 1661, 1771, 1834
BsnI GGCC 6 cut(s) 426, 899, 995, 1554, 1945, 1983
Bso31I GGTCTC 2 cut(s) 199, 1709
BsoBI CYCGRG 2 cut(s) 1796, 2519
Bsp119I TTCGAA 1 cut(s) 1173
Bsp1286I GDGCHC 4 cut(s) 136, 414, 1609, 1851
Bsp143I GATC 5 cut(s) 179, 1515, 1709, 2076, 2113
Bsp19I CCATGG 1 cut(s) 1591
BspACI CCGC 5 cut(s) 353, 996, 1525, 1989, 2050
BspANI GGCC 6 cut(s) 426, 899, 995, 1554, 1945, 1983
BspCNI CTCAG 2 cut(s) 366, 1478
BspHI TCATGA 2 cut(s) 400, 2449
BspLI GGNNCC 3 cut(s) 30, 371, 1692
BspOI GCTAGC 1 cut(s) 353
BspPI GGATC 2 cut(s) 1717, 2121
BspT104I TTCGAA 1 cut(s) 1173
BspTNI GGTCTC 2 cut(s) 199, 1709
BsrBI CCGCTC 1 cut(s) 1525
BsrDI GCAATG 2 cut(s) 1005, 1984
BsrI ACTGG 2 cut(s) 2441, 2543
BssECI CCNNGG 3 cut(s) 1591, 2485, 2520
BssMI GATC 5 cut(s) 179, 1515, 1709, 2076, 2113
BssNAI GTATAC 1 cut(s) 593
BssNI GRCGYC 1 cut(s) 1017
BssSI CACGAG 1 cut(s) 135
BssT1I CCWWGG 1 cut(s) 1591
Bst1107I GTATAC 1 cut(s) 593
Bst2BI CACGAG 1 cut(s) 135
Bst4CI ACNGT 6 cut(s) 77, 188, 416, 700, 1317, 2024
Bst6I CTCTTC 1 cut(s) 2022
BstACI GRCGYC 1 cut(s) 1017
BstBAI YACGTR 1 cut(s) 991
BstBI TTCGAA 1 cut(s) 1173
BstC8I GCNNGC 1 cut(s) 351
BstDEI CTNAG 7 cut(s) 309, 374, 501, 1465, 1751, 1902, 2279
BstDSI CCRYGG 1 cut(s) 1591
BstH2I RGCGCY 2 cut(s) 1465, 2405
BstHHI GCGC 2 cut(s) 1464, 2404
BstKTI GATC 5 cut(s) 182, 1518, 1712, 2079, 2116
BstMAI GTCTC 3 cut(s) 199, 1709, 2533
BstMBI GATC 5 cut(s) 179, 1515, 1709, 2076, 2113
BstMCI CGRYCG 2 cut(s) 1529, 2491
BstMWI GCNNNNNNNGC 4 cut(s) 755, 1004, 1358, 2093
BstNSI RCATGY 1 cut(s) 11
BstPAI GACNNNNGTC 1 cut(s) 2202
BstSFI CTRYAG 5 cut(s) 1332, 1567, 1842, 2001, 2574
BstSLI GKGCMC 3 cut(s) 414, 1609, 1851
BstV1I GCAGC 5 cut(s) 508, 1126, 1201, 1879, 2096
BstV2I GAAGAC 4 cut(s) 984, 1012, 1401, 2241
BstX2I RGATCY 1 cut(s) 179
BstXI CCANNNNNNTGG 1 cut(s) 2105
BstYI RGATCY 1 cut(s) 179
BstZ17I GTATAC 1 cut(s) 593
Bsu36I CCTNAGG 1 cut(s) 501
BsuI GTATCC 2 cut(s) 872, 1901
BsuRI GGCC 6 cut(s) 426, 899, 995, 1554, 1945, 1983
BtgI CCRYGG 1 cut(s) 1591
BtsIMutI CAGTG 5 cut(s) 193, 421, 1158, 1313, 2264
Cac8I GCNNGC 1 cut(s) 351
CciI TCATGA 2 cut(s) 400, 2449
CfoI GCGC 2 cut(s) 1464, 2404
Cfr13I GGNCC 4 cut(s) 370, 424, 897, 1835
CseI GACGC 1 cut(s) 1367
Csp6I GTAC 9 cut(s) 63, 258, 290, 1026, 1223, 1444, 1587, 1624, 2234
CspCI CAANNNNNGTGG 2 cut(s) 1920, 1955
CviQI GTAC 9 cut(s) 63, 258, 290, 1026, 1223, 1444, 1587, 1624, 2234
DdeI CTNAG 7 cut(s) 309, 374, 501, 1465, 1751, 1902, 2279
DpnI GATC 5 cut(s) 181, 1517, 1711, 2078, 2115
DpnII GATC 5 cut(s) 179, 1515, 1709, 2076, 2113
DraI TTTAAA 2 cut(s) 88, 1126
EaeI YGGCCR 3 cut(s) 993, 1552, 1981
Eam1104I CTCTTC 1 cut(s) 2022
EarI CTCTTC 1 cut(s) 2022
Eco130I CCWWGG 1 cut(s) 1591
Eco24I GRGCYC 1 cut(s) 136
Eco31I GGTCTC 2 cut(s) 199, 1709
Eco47I GGWCC 2 cut(s) 370, 1835
Eco57I CTGAAG 3 cut(s) 1006, 1182, 2235
Eco81I CCTNAGG 1 cut(s) 501
Eco88I CYCGRG 2 cut(s) 1796, 2519
EcoO109I RGGNCCY 1 cut(s) 370
EcoT14I CCWWGG 1 cut(s) 1591
EcoT22I ATGCAT 7 cut(s) 396, 1299, 1380, 1507, 1661, 2143, 2244
EcoT38I GRGCYC 1 cut(s) 136
ErhI CCWWGG 1 cut(s) 1591
Esp3I CGTCTC 1 cut(s) 2533
FaqI GGGAC 2 cut(s) 383, 545
FauI CCCGC 1 cut(s) 2043
FbaI TGATCA 1 cut(s) 2076
FblI GTMKAC 5 cut(s) 295, 592, 1529, 1639, 2577
Fnu4HI GCNGC 7 cut(s) 354, 497, 996, 1115, 1190, 1868, 2085
FriOI GRGCYC 1 cut(s) 136
Fsp4HI GCNGC 7 cut(s) 354, 497, 996, 1115, 1190, 1868, 2085
FspBI CTAG 5 cut(s) 210, 350, 681, 729, 2316
GlaI GCGC 2 cut(s) 1463, 2403
GluI GCNGC 7 cut(s) 354, 497, 996, 1115, 1190, 1868, 2085
GsuI CTGGAG 1 cut(s) 2382
HaeII RGCGCY 2 cut(s) 1465, 2405
HaeIII GGCC 6 cut(s) 426, 899, 995, 1554, 1945, 1983
HapII CCGG 3 cut(s) 331, 1084, 1707
HgaI GACGC 1 cut(s) 1367
HhaI GCGC 2 cut(s) 1464, 2404
Hin1I GRCGYC 1 cut(s) 1017
Hin6I GCGC 2 cut(s) 1462, 2402
HinP1I GCGC 2 cut(s) 1462, 2402
HincII GTYRAC 4 cut(s) 296, 831, 1530, 1640
HindII GTYRAC 4 cut(s) 296, 831, 1530, 1640
HindIII AAGCTT 1 cut(s) 1413
HinfI GANTC 4 cut(s) 773, 1808, 2416, 2561
HpaII CCGG 3 cut(s) 331, 1084, 1707
HphI GGTGA 3 cut(s) 371, 2036, 2053
Hpy188I TCNGA 7 cut(s) 184, 786, 1096, 1468, 1714, 1813, 2113
Hpy188III TCNNGA 9 cut(s) 106, 137, 401, 452, 664, 1798, 1894, 2450, 2532
Hpy99I CGWCG 5 cut(s) 297, 808, 1019, 1361, 1746
HpyAV CCTTC 5 cut(s) 380, 466, 781, 1468, 2580
HpyCH4III ACNGT 6 cut(s) 77, 188, 416, 700, 1317, 2024
HpyCH4IV ACGT 8 cut(s) 292, 806, 827, 990, 1017, 1585, 1744, 2458
HpyF10VI GCNNNNNNNGC 4 cut(s) 755, 1004, 1358, 2093
HpyF3I CTNAG 7 cut(s) 309, 374, 501, 1465, 1751, 1902, 2279
HpySE526I ACGT 8 cut(s) 292, 806, 827, 990, 1017, 1585, 1744, 2458
Hsp92I GRCGYC 1 cut(s) 1017
HspAI GCGC 2 cut(s) 1462, 2402
Ksp22I TGATCA 1 cut(s) 2076
Kzo9I GATC 5 cut(s) 179, 1515, 1709, 2076, 2113
LmnI GCTCC 5 cut(s) 4, 493, 1111, 1369, 2092
Lsp1109I GCAGC 5 cut(s) 508, 1126, 1201, 1879, 2096
LweI GCATC 6 cut(s) 977, 1160, 1668, 2015, 2169, 2225
MaeI CTAG 5 cut(s) 210, 350, 681, 729, 2316
MaeII ACGT 8 cut(s) 292, 806, 827, 990, 1017, 1585, 1744, 2458
MaeIII GTNAC 4 cut(s) 169, 638, 823, 2018
MalI GATC 5 cut(s) 181, 1517, 1711, 2078, 2115
MbiI CCGCTC 1 cut(s) 1525
MboI GATC 5 cut(s) 179, 1515, 1709, 2076, 2113
MboII GAAGA 9 cut(s) 128, 861, 989, 1012, 1406, 2039, 2185, 2241, 2354
MfeI CAATTG 1 cut(s) 620
MflI RGATCY 1 cut(s) 179
MhlI GDGCHC 4 cut(s) 136, 414, 1609, 1851
MlsI TGGCCA 2 cut(s) 1554, 1983
MluNI TGGCCA 2 cut(s) 1554, 1983
MlyI GAGTC 1 cut(s) 782
MmeI TCCRAC 2 cut(s) 2014, 2417
Mox20I TGGCCA 2 cut(s) 1554, 1983
Mph1103I ATGCAT 7 cut(s) 396, 1299, 1380, 1507, 1661, 2143, 2244
MroXI GAANNNNTTC 1 cut(s) 2445
MscI TGGCCA 2 cut(s) 1554, 1983
MslI CAYNNNNRTG 3 cut(s) 399, 701, 1654
Msp20I TGGCCA 2 cut(s) 1554, 1983
MspA1I CMGCKG 1 cut(s) 758
MspI CCGG 3 cut(s) 331, 1084, 1707
MunI CAATTG 1 cut(s) 620
Mva1269I GAATGC 4 cut(s) 396, 1661, 1771, 1834
MwoI GCNNNNNNNGC 4 cut(s) 755, 1004, 1358, 2093
NcoI CCATGG 1 cut(s) 1591
NdeII GATC 5 cut(s) 179, 1515, 1709, 2076, 2113
NheI GCTAGC 1 cut(s) 349
NlaIV GGNNCC 3 cut(s) 30, 371, 1692
NmuCI GTSAC 1 cut(s) 169
NsiI ATGCAT 7 cut(s) 396, 1299, 1380, 1507, 1661, 2143, 2244
NspI RCATGY 1 cut(s) 11
NspV TTCGAA 1 cut(s) 1173
PaeR7I CTCGAG 1 cut(s) 1796
PagI TCATGA 2 cut(s) 400, 2449
PctI GAATGC 4 cut(s) 396, 1661, 1771, 1834
PdmI GAANNNNTTC 1 cut(s) 2445
PfeI GAWTC 3 cut(s) 1808, 2416, 2561
Pfl23II CGTACG 1 cut(s) 289
PflFI GACNNNGTC 1 cut(s) 698
PflMI CCANNNNNTGG 1 cut(s) 2469
PkrI GCNGC 7 cut(s) 355, 498, 997, 1116, 1191, 1869, 2086
PleI GAGTC 1 cut(s) 781
PpsI GAGTC 1 cut(s) 781
Ppu21I YACGTR 1 cut(s) 991
PpuMI RGGWCCY 1 cut(s) 370
PshAI GACNNNNGTC 1 cut(s) 2202
PshBI ATTAAT 1 cut(s) 632
Psp1406I AACGTT 1 cut(s) 2458
Psp5II RGGWCCY 1 cut(s) 370
PspLI CGTACG 1 cut(s) 289
PspN4I GGNNCC 3 cut(s) 30, 371, 1692
PspPI GGNCC 4 cut(s) 370, 424, 897, 1835
PspPPI RGGWCCY 1 cut(s) 370
PsrI GAACNNNNNNTAC 2 cut(s) 1806, 1838
PsuI RGATCY 1 cut(s) 179
PsyI GACNNNGTC 1 cut(s) 698
PvuII CAGCTG 1 cut(s) 758
RsaI GTAC 9 cut(s) 64, 259, 291, 1027, 1224, 1445, 1588, 1625, 2235
RsaNI GTAC 9 cut(s) 63, 258, 290, 1026, 1223, 1444, 1587, 1624, 2234
RseI CAYNNNNRTG 3 cut(s) 399, 701, 1654
SalI GTCGAC 3 cut(s) 294, 1528, 1638
SatI GCNGC 7 cut(s) 354, 497, 996, 1115, 1190, 1868, 2085
Sau3AI GATC 5 cut(s) 179, 1515, 1709, 2076, 2113
Sau96I GGNCC 4 cut(s) 370, 424, 897, 1835
SchI GAGTC 1 cut(s) 782
SduI GDGCHC 4 cut(s) 136, 414, 1609, 1851
SfaNI GCATC 6 cut(s) 977, 1160, 1668, 2015, 2169, 2225
SfcI CTRYAG 5 cut(s) 1332, 1567, 1842, 2001, 2574
Sfr274I CTCGAG 1 cut(s) 1796
SfuI TTCGAA 1 cut(s) 1173
SinI GGWCC 2 cut(s) 370, 1835
SlaI CTCGAG 1 cut(s) 1796
SmiMI CAYNNNNRTG 3 cut(s) 399, 701, 1654
SmlI CTYRAG 5 cut(s) 450, 602, 1538, 1796, 1910
SmoI CTYRAG 5 cut(s) 450, 602, 1538, 1796, 1910
SpeI ACTAGT 1 cut(s) 680
SsiI CCGC 5 cut(s) 353, 996, 1525, 1989, 2050
SspI AATATT 1 cut(s) 2180
SspMI CTAG 5 cut(s) 210, 350, 681, 729, 2316
StyI CCWWGG 1 cut(s) 1591
TaaI ACNGT 6 cut(s) 77, 188, 416, 700, 1317, 2024
TaiI ACGT 8 cut(s) 295, 809, 830, 993, 1020, 1588, 1747, 2461
TaqI TCGA 8 cut(s) 295, 663, 1173, 1356, 1529, 1639, 1797, 2340
TaqII GACCGA 1 cut(s) 2477
TatI WGTACW 4 cut(s) 257, 1443, 1623, 2233
TauI GCSGC 2 cut(s) 356, 998
TfiI GAWTC 3 cut(s) 1808, 2416, 2561
TscAI CASTG 5 cut(s) 193, 421, 1165, 1320, 2264
TseFI GTSAC 1 cut(s) 169
TseI GCWGC 5 cut(s) 496, 1114, 1189, 1867, 2084
Tsp45I GTSAC 1 cut(s) 169
TspGWI ACGGA 4 cut(s) 72, 293, 892, 1827
TspRI CASTG 5 cut(s) 193, 421, 1165, 1320, 2264
Tth111I GACNNNGTC 1 cut(s) 698
Van91I CCANNNNNTGG 1 cut(s) 2469
VneI GTGCAC 1 cut(s) 1605
VpaK11BI GGWCC 2 cut(s) 370, 1835
VspI ATTAAT 1 cut(s) 632
XapI RAATTY 3 cut(s) 83, 904, 1202
XceI RCATGY 1 cut(s) 11
XhoI CTCGAG 1 cut(s) 1796
XmiI GTMKAC 5 cut(s) 295, 592, 1529, 1639, 2577
XmnI GAANNNNTTC 1 cut(s) 2445
XspI CTAG 5 cut(s) 210, 350, 681, 729, 2316
ZraI GACGTC 1 cut(s) 1018
Zsp2I ATGCAT 7 cut(s) 396, 1299, 1380, 1507, 1661, 2143, 2244
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.