Rmu_sc0013504.1_g000009

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0013504.1
OG0000143
Physical Location & Seq
Reverse (-)
35623 .. 38421
2799 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0013504.1_g000009.1.cds

Sequence Viewer

Length: 2085 bp
atgaagacgatatataatgccagaagagtacatcggtcgaaggttatggctgggagatcacaaatgcaatgtttgctacataagttgagggaacacaattatgttgagcatcacaggagtgaaggtgatattatcactgatttgttttggtgtcatccttattgtcttcagattttacgtacctttccacatgttcttatcatggattgcacctacaagacaaatagatattgttttcctctttttgagattgttggggtgacatctactgagaagaccttcaatgttgcatttgtttatatgtcaagagaggcggaagacaattacacatgggctttgagtagattgaagactcttttgcatgatgactgtactccgggtgttattgtgactgatcgagaattagcactaatgaatagcattagcaaattatttcctggttctcgacatctcctgtgtaaatggcatattaataagaacgtgatgaaagagtgtaagaaaaagtttgcaacaaaagaagggtgggatgcatttaatggtgcttggaacactgttgttagttctacaactgagggtgagtattggaaaaatctcaaggaattggagtgtaaatttagtacatatcctaatgaacttcggtatgtgaagagcaactggttggacaactacaaagaacgatttgtcgttgcatggacagatacttgcatgcacatcggtaccactacttcaaatcgggctgaaaatattaaagacttggcatgttgtggttgtactatacgtgttacacatggtttgccatgtgcacatgagattgctgagtacaaacgctctgacaagccaattcctattgacacgattcacaggcattggagacagttgggtgttgatcagaacatgcatactagtgacactgaagaaaatgttccagtaaaacaacatatggttcgattagagaagtgggttgaacaacaaaatgatgaaactagacgagaatttttgataaaaattgatgagctgatgaatccaggtagtacgttccttaaagaacctgcagagagagtgaagacaaaaggacgtccacgtaaaattgacactagtactcgacgtttgccatccgcatgggagattgataatgttctttctagtcaggacaataactcactttcacctgcagtttatgaagttggtcaagatgttccccatggtcctattgttcctgttcatcctactacagaaaataaaaaaccaaagaatgttccgaataaaattcagagcccaaaagattctacatttgcacttacaaccaaatataattgccaattccgagttggaattcaactgtatattattggcgcatttgatgttgaatctgatggaaattgtggttatagagctgtggcttcggcaatgggatttggtcgaaaatcttggcgtcgaagcccaaaagactctacatttgcacttacaaccaaatataattgccaattccgagttggaattcagccatatattataggagcatatgatgttgaatctgatggcaattgtggttatagagttgtggcttcggcaatgggatttggtcgaaaatcatggcgtcgagttcgtagggatttattgaatgagttagatagtatgcctcaattgtatgaaagtctctttggtactaaagaggttaagaaggttaaggatgcactaaaccattatagctctgggagcgcacctaaaagatgttggatgtatttcccagaaatggggcatttgattgcaacttgttatggtgtggtggtgatcgatttatcagatgggcaatgcataacatttcttcctcttgtggaacaccatactggacttttcaatagcaatgagcttcaagagattggaattggtcatgtgaatagcaatcacttcgtacatcttaaattgtctcctggacatcctttgccaaaagttgtaccaaactgggagaggaatgcagacgccaaagttatacatttgtattctagataccagaaccgtctacagcaatacaaagaatgttgtcctattaccgtagtttcagagacttttacactcgatgattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AFT FAR1 MULE

Protein Analysis

694

Amino Acids

79.95

Weight (kDa)

8.74

Isoelectric Point (pI)

47.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000143)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G76710 AT1G76710 AT1G76710 AT1G76710
fragaria_vesca FvH4_1g20063 FvH4_2g15231 FvH4_3g04011 FvH4_3g28681 FvH4_4g01411 FvH4_4g10181 FvH4_4g15922 FvH4_4g16651 FvH4_4g16652 FvH4_5g13892 FvH4_5g13893 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g25511 FvH4_6g12551 FvH4_6g12552 FvH4_6g38841 FvH4_7g04391
malus_domestica MD05G1031300.v1.1 MD05G1031400.v1.1 MD05G1031500.v1.1 MD08G1164400.v1.1 MD10G1032900.v1.1 MD10G1033000.v1.1 MD10G1033100.v1.1
prunus_persica Prupe.3G240700_v2.0.a1 Prupe.7G144600_v2.0.a1 Prupe.8G038500_v2.0.a1 Prupe.8G038500_v2.0.a1
pyrus_communis pycom05g02250 pycom05g02260 pycom05g02270 pycom05g02280 pycom08g14160 pycom10g02100 pycom10g02110 pycom10g02130
rosa_chinensis RchiOBHm_Chr1g0329481 RchiOBHm_Chr1g0329491 RchiOBHm_Chr1g0341531 RchiOBHm_Chr3g0464811 RchiOBHm_Chr3g0494701 RchiOBHm_Chr3g0497501 RchiOBHm_Chr4g0385841 RchiOBHm_Chr5g0061181 RchiOBHm_Chr6g0263001 RchiOBHm_Chr7g0193111 RchiOBHm_Chr7g0206281 RchiOBHm_Chr7g0206311
rosa_laevigata RLG00000018908 RLG00000028528 RLG00000028803 RLG00000029882 RLG00000029883 RLG00000030361
rosa_multiflora Rmu_co8196328.1_g000001 Rmu_co8259135.1_g000001 Rmu_co8269185.1_g000001 Rmu_sc0000076.1_g000019 Rmu_sc0000311.1_g000007 Rmu_sc0000429.1_g000038 Rmu_sc0000429.1_g000039 Rmu_sc0000429.1_g000040 Rmu_sc0000511.1_g000005 Rmu_sc0000539.1_g000054 Rmu_sc0000566.1_g000039 Rmu_sc0000805.1_g000032 Rmu_sc0000870.1_g000073 Rmu_sc0000870.1_g000074 Rmu_sc0001010.1_g000018 Rmu_sc0001083.1_g000013 Rmu_sc0001114.1_g000011 Rmu_sc0001702.1_g000027 Rmu_sc0001779.1_g000012 Rmu_sc0002923.1_g000036 Rmu_sc0003242.1_g000011 Rmu_sc0003291.1_g000036 Rmu_sc0003393.1_g000012 Rmu_sc0003872.1_g000016 Rmu_sc0003872.1_g000017 Rmu_sc0003872.1_g000018 Rmu_sc0004084.1_g000020 Rmu_sc0004386.1_g000005 Rmu_sc0004622.1_g000005 Rmu_sc0004742.1_g000021 Rmu_sc0004755.1_g000020 Rmu_sc0004805.1_g000036 Rmu_sc0005065.1_g000006 Rmu_sc0005177.1_g000004 Rmu_sc0006373.1_g000003 Rmu_sc0006373.1_g000004 Rmu_sc0007121.1_g000002 Rmu_sc0007943.1_g000003 Rmu_sc0010368.1_g000006 Rmu_sc0010543.1_g000001 Rmu_sc0012591.1_g000006 Rmu_sc0013504.1_g000009 Rmu_sc0015025.1_g000001 Rmu_sc0016170.1_g000001 Rmu_sc0017156.1_g000001 Rmu_sc0026439.1_g000001
rosa_roxburghii Rroxscaffold_175G00432280 Rroxscaffold_1G00030190 Rroxscaffold_1G00030880 Rroxscaffold_2G00090520 Rroxscaffold_3G00227940 Rroxscaffold_3G00233400 Rroxscaffold_3G00238500 Rroxscaffold_3G00251650 Rroxscaffold_4G00301570 Rroxscaffold_4G00321040 Rroxscaffold_5G00350880 Rroxscaffold_7G00184400
rosa_rugosa Rorug01G0080800 Rorug01G0080900 Rorug01G0193900 Rorug02G0275900 Rorug02G0275900 Rorug02G0275900 Rorug02G0305400 Rorug02G0311800 Rorug02G0350400 Rorug02G0381300 Rorug03G0136700 Rorug03G0181900 Rorug03G0268000 Rorug04G0301600 Rorug05G0175100 Rorug05G0250700 Rorug05G0298200 Rorug05G0596000 Rorug06G0029500 Rorug07G0094300 Rorug07G0094300 Rorug07G0095400 Rorug07G0140100
rosa_samantha Rh1AG099200 Rh1AG190500 Rh1BG078900 Rh1BG079000 Rh1BG079100 Rh1CG084600 Rh1CG084700 Rh1CG095300 Rh1CG175900 Rh1DG103300 Rh1DG150400 Rh2AG079300 Rh2AG272400 Rh2AG464800 Rh2AG507400 Rh2DG078300 Rh2DG078400 Rh3CG206900 Rh3CG295400 Rh3DG206800 Rh3DG356200 Rh4CG071500 Rh4CG179200 Rh4DG064700 Rh5CG362400 Rh7AG212300 Rh7AG226200 Rh7BG222200
rosa_wichuraiana Rw0G009990 Rw0G011260 Rw0G011270 Rw0G012910 Rw0G013740 Rw1G007740 Rw1G013050 Rw1G014230 Rw2G014270 Rw3G012720 Rw3G028110 Rw4G006630 Rw4G015270 Rw4G016160 Rw4G031380 Rw5G011440 Rw5G029180 Rw5G048360 Rw5G048430 Rw5G048780 Rw6G005250 Rw6G006390 Rw7G002840 Rw7G014080 Rw7G019650 Rw7G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1177
AatII GACGTC 1 cut(s) 1078
Acc36I ACCTGC 2 cut(s) 1057, 1177
Acc65I GGTACC 1 cut(s) 716
AccB1I GGYRCC 1 cut(s) 716
AccI GTMKAC 1 cut(s) 2020
AciI CCGC 2 cut(s) 314, 1116
AcsI RAATTY 5 cut(s) 611, 992, 1266, 1332, 1497
AcuI CTGAAG 2 cut(s) 152, 933
AcyI GRCGYC 4 cut(s) 1075, 1432, 1597, 1980
AfiI CCNNNNNNNGG 2 cut(s) 1753, 1754
AflIII ACRYGT 2 cut(s) 190, 778
AhlI ACTAGT 2 cut(s) 902, 1094
AjnI CCWGG 3 cut(s) 436, 1024, 1930
AjuI GAANNNNNNNTTGG 2 cut(s) 1644, 1676
AleI CACNNNNGTG 1 cut(s) 117
AluBI AGCT 4 cut(s) 1015, 1394, 1710, 1870
AluI AGCT 4 cut(s) 1015, 1394, 1710, 1870
Alw21I GWGCWC 1 cut(s) 805
Alw26I GTCTC 4 cut(s) 865, 1661, 1932, 2057
Alw44I GTGCAC 1 cut(s) 801
ApaLI GTGCAC 1 cut(s) 801
ApoI RAATTY 5 cut(s) 611, 992, 1266, 1332, 1497
ArsI GACNNNNNNTTYG 2 cut(s) 1439, 1471
AseI ATTAAT 1 cut(s) 471
Asp700I GAANNNNTTC 2 cut(s) 278, 921
Asp718I GGTACC 1 cut(s) 716
AspLEI GCGC 2 cut(s) 1355, 1721
AspS9I GGNCC 1 cut(s) 1205
AsuC2I CCSGG 1 cut(s) 378
AsuHPI GGTGA 5 cut(s) 137, 271, 587, 1158, 1801
AvaII GGWCC 1 cut(s) 1205
BaeGI GKGCMC 1 cut(s) 805
BaeI ACNNNNGTAYC 2 cut(s) 700, 733
BanI GGYRCC 1 cut(s) 716
BanII GRGCYC 1 cut(s) 1277
BarI GAAGNNNNNNTAC 2 cut(s) 709, 741
BbsI GAAGAC 6 cut(s) 11, 158, 281, 324, 356, 1070
Bbv12I GWGCWC 1 cut(s) 805
BccI CCATC 4 cut(s) 1120, 1367, 1532, 1799
BcgI CGANNNNNNTGC 4 cut(s) 694, 728, 1891, 1925
BciT130I CCWGG 3 cut(s) 438, 1026, 1932
BclI TGATCA 1 cut(s) 886
BcnI CCSGG 1 cut(s) 378
BcoDI GTCTC 4 cut(s) 865, 1661, 1932, 2057
BcuI ACTAGT 2 cut(s) 902, 1094
BfaI CTAG 5 cut(s) 903, 984, 1095, 1143, 2004
BfmI CTRYAG 4 cut(s) 1050, 1170, 1230, 2021
BfuAI ACCTGC 2 cut(s) 1057, 1177
BmcAI AGTACT 1 cut(s) 1099
Bme1390I CCNGG 4 cut(s) 378, 438, 1026, 1932
Bme18I GGWCC 1 cut(s) 1205
BmgT120I GGNCC 1 cut(s) 1205
BmiI GGNNCC 1 cut(s) 718
BmrFI CCNGG 4 cut(s) 378, 438, 1026, 1932
BmrI ACTGGG 1 cut(s) 1972
BmsI GCATC 3 cut(s) 118, 517, 1681
BmuI ACTGGG 1 cut(s) 1972
BpiI GAAGAC 6 cut(s) 11, 158, 281, 324, 356, 1070
BpuEI CTTGAG 1 cut(s) 578
BpuMI CCSGG 1 cut(s) 378
Bsa29I ATCGAT 1 cut(s) 1794
BsaAI YACGTR 3 cut(s) 179, 779, 1082
BsaHI GRCGYC 4 cut(s) 1075, 1432, 1597, 1980
BsaJI CCNNGG 1 cut(s) 1201
BsaXI ACNNNNNCTCC 2 cut(s) 109, 139
Bsc4I CCNNNNNNNGG 2 cut(s) 1753, 1754
Bse1I ACTGG 4 cut(s) 659, 926, 1852, 1967
Bse3DI GCAATG 5 cut(s) 74, 1413, 1578, 1817, 1870
BseBI CCWGG 3 cut(s) 438, 1026, 1932
BseCI ATCGAT 1 cut(s) 1794
BseDI CCNNGG 1 cut(s) 1201
BseGI GGATG 7 cut(s) 154, 532, 1112, 1222, 1696, 1743, 1936
BseLI CCNNNNNNNGG 2 cut(s) 1753, 1754
BseMI GCAATG 5 cut(s) 74, 1413, 1578, 1817, 1870
BseMII CTCAG 3 cut(s) 261, 561, 807
BseNI ACTGG 4 cut(s) 659, 926, 1852, 1967
BseSI GKGCMC 1 cut(s) 805
BseYI CCCAGC 1 cut(s) 50
Bsh1285I CGRYCG 1 cut(s) 38
BshNI GGYRCC 1 cut(s) 716
BshVI ATCGAT 1 cut(s) 1794
BsiEI CGRYCG 1 cut(s) 38
BsiHKAI GWGCWC 1 cut(s) 805
BsiSI CCGG 1 cut(s) 377
BslI CCNNNNNNNGG 2 cut(s) 1753, 1754
BsmAI GTCTC 4 cut(s) 865, 1661, 1932, 2057
BsmI GAATGC 1 cut(s) 1978
Bsp1286I GDGCHC 2 cut(s) 805, 1277
Bsp143I GATC 4 cut(s) 56, 394, 886, 1791
Bsp19I CCATGG 1 cut(s) 1201
BspACI CCGC 2 cut(s) 314, 1116
BspCNI CTCAG 3 cut(s) 262, 562, 808
BspDI ATCGAT 1 cut(s) 1794
BspLI GGNNCC 1 cut(s) 718
BspMAI CTGCAG 2 cut(s) 1054, 1174
BspMI ACCTGC 2 cut(s) 1057, 1177
BspQI GCTCTTC 1 cut(s) 641
BspT107I GGYRCC 1 cut(s) 716
BsrDI GCAATG 5 cut(s) 74, 1413, 1578, 1817, 1870
BsrI ACTGG 4 cut(s) 659, 926, 1852, 1967
BssECI CCNNGG 1 cut(s) 1201
BssMI GATC 4 cut(s) 56, 394, 886, 1791
BssNI GRCGYC 4 cut(s) 1075, 1432, 1597, 1980
BssT1I CCWWGG 1 cut(s) 1201
Bst2UI CCWGG 3 cut(s) 438, 1026, 1932
Bst4CI ACNGT 6 cut(s) 371, 553, 876, 1341, 2018, 2053
Bst6I CTCTTC 2 cut(s) 19, 641
BstACI GRCGYC 4 cut(s) 1075, 1432, 1597, 1980
BstAPI GCANNNNNTGC 1 cut(s) 73
BstBAI YACGTR 3 cut(s) 179, 779, 1082
BstC8I GCNNGC 1 cut(s) 707
BstDEI CTNAG 3 cut(s) 270, 570, 816
BstDSI CCRYGG 1 cut(s) 1201
BstF5I GGATG 7 cut(s) 154, 532, 1112, 1222, 1696, 1743, 1936
BstHHI GCGC 2 cut(s) 1355, 1721
BstKTI GATC 4 cut(s) 59, 397, 889, 1794
BstMAI GTCTC 4 cut(s) 865, 1661, 1932, 2057
BstMBI GATC 4 cut(s) 56, 394, 886, 1791
BstMCI CGRYCG 1 cut(s) 38
BstMWI GCNNNNNNNGC 2 cut(s) 73, 1716
BstNI CCWGG 3 cut(s) 438, 1026, 1932
BstNSI RCATGY 4 cut(s) 194, 709, 762, 898
BstSCI CCNGG 4 cut(s) 376, 436, 1024, 1930
BstSFI CTRYAG 4 cut(s) 1050, 1170, 1230, 2021
BstSLI GKGCMC 1 cut(s) 805
BstSNI TACGTA 1 cut(s) 179
BstV2I GAAGAC 6 cut(s) 11, 158, 281, 324, 356, 1070
BstXI CCANNNNNNTGG 1 cut(s) 1119
Bsu15I ATCGAT 1 cut(s) 1794
BsuTUI ATCGAT 1 cut(s) 1794
BtgI CCRYGG 1 cut(s) 1201
BtsCI GGATG 7 cut(s) 154, 532, 1112, 1222, 1696, 1743, 1936
BtsIMutI CAGTG 3 cut(s) 135, 549, 909
BveI ACCTGC 2 cut(s) 1057, 1177
Cac8I GCNNGC 1 cut(s) 707
CfoI GCGC 2 cut(s) 1355, 1721
Cfr13I GGNCC 1 cut(s) 1205
ClaI ATCGAT 1 cut(s) 1794
CseI GACGC 3 cut(s) 1421, 1586, 1988
DdeI CTNAG 3 cut(s) 270, 570, 816
DpnI GATC 4 cut(s) 58, 396, 888, 1793
DpnII GATC 4 cut(s) 56, 394, 886, 1791
Eam1104I CTCTTC 2 cut(s) 19, 641
EarI CTCTTC 2 cut(s) 19, 641
EciI GGCGGA 1 cut(s) 329
Eco105I TACGTA 1 cut(s) 179
Eco130I CCWWGG 1 cut(s) 1201
Eco24I GRGCYC 1 cut(s) 1277
Eco47I GGWCC 1 cut(s) 1205
Eco57I CTGAAG 2 cut(s) 152, 933
EcoRI GAATTC 2 cut(s) 1332, 1497
EcoRII CCWGG 3 cut(s) 436, 1024, 1930
EcoT14I CCWWGG 1 cut(s) 1201
EcoT22I ATGCAT 3 cut(s) 532, 900, 1817
EcoT38I GRGCYC 1 cut(s) 1277
ErhI CCWWGG 1 cut(s) 1201
FauNDI CATATG 2 cut(s) 939, 1522
FbaI TGATCA 1 cut(s) 886
FblI GTMKAC 1 cut(s) 2020
FokI GGATG 7 cut(s) 141, 539, 1099, 1209, 1703, 1750, 1923
FriOI GRGCYC 1 cut(s) 1277
FspBI CTAG 5 cut(s) 903, 984, 1095, 1143, 2004
GlaI GCGC 2 cut(s) 1354, 1720
GsaI CCCAGC 1 cut(s) 54
HapII CCGG 1 cut(s) 377
HgaI GACGC 3 cut(s) 1421, 1586, 1988
HhaI GCGC 2 cut(s) 1355, 1721
Hin1I GRCGYC 4 cut(s) 1075, 1432, 1597, 1980
Hin6I GCGC 2 cut(s) 1353, 1719
HinP1I GCGC 2 cut(s) 1353, 1719
HinfI GANTC 7 cut(s) 352, 856, 1021, 1283, 1367, 1448, 1532
HpaII CCGG 1 cut(s) 377
HphI GGTGA 5 cut(s) 137, 271, 587, 1158, 1801
Hpy166II GTNNAC 3 cut(s) 803, 1079, 2021
Hpy188III TCNNGA 7 cut(s) 306, 398, 444, 1148, 1190, 1874, 2004
Hpy8I GTNNAC 3 cut(s) 803, 1079, 2021
Hpy99I CGWCG 3 cut(s) 1107, 1437, 1602
HpyAV CCTTC 5 cut(s) 34, 116, 289, 512, 1675
HpyCH4III ACNGT 6 cut(s) 371, 553, 876, 1341, 2018, 2053
HpyCH4IV ACGT 7 cut(s) 178, 480, 778, 1034, 1075, 1081, 1105
HpyF10VI GCNNNNNNNGC 2 cut(s) 73, 1716
HpyF3I CTNAG 3 cut(s) 270, 570, 816
HpySE526I ACGT 7 cut(s) 178, 480, 778, 1034, 1075, 1081, 1105
Hsp92I GRCGYC 4 cut(s) 1075, 1432, 1597, 1980
HspAI GCGC 2 cut(s) 1353, 1719
KpnI GGTACC 1 cut(s) 720
Ksp22I TGATCA 1 cut(s) 886
Kzo9I GATC 4 cut(s) 56, 394, 886, 1791
LguI GCTCTTC 1 cut(s) 641
LmnI GCTCC 2 cut(s) 1517, 1716
LweI GCATC 3 cut(s) 118, 517, 1681
MaeI CTAG 5 cut(s) 903, 984, 1095, 1143, 2004
MaeII ACGT 7 cut(s) 178, 480, 778, 1034, 1075, 1081, 1105
MaeIII GTNAC 4 cut(s) 259, 388, 781, 905
MalI GATC 4 cut(s) 58, 396, 888, 1793
MboI GATC 4 cut(s) 56, 394, 886, 1791
MfeI CAATTG 2 cut(s) 1543, 1643
MhlI GDGCHC 2 cut(s) 805, 1277
MlyI GAGTC 2 cut(s) 346, 1442
MmeI TCCRAC 4 cut(s) 639, 1309, 1474, 1715
MnlI CCTC 8 cut(s) 81, 249, 304, 565, 1650, 1666, 1839, 1962
Mph1103I ATGCAT 3 cut(s) 532, 900, 1817
MroXI GAANNNNTTC 2 cut(s) 278, 921
MseI TTAA 7 cut(s) 471, 534, 747, 1041, 1677, 1686, 1920
MslI CAYNNNNRTG 4 cut(s) 99, 117, 903, 1117
MspI CCGG 1 cut(s) 377
MspR9I CCNGG 4 cut(s) 378, 438, 1026, 1932
MunI CAATTG 2 cut(s) 1543, 1643
Mva1269I GAATGC 1 cut(s) 1978
MvaI CCWGG 3 cut(s) 438, 1026, 1932
MwoI GCNNNNNNNGC 2 cut(s) 73, 1716
NciI CCSGG 1 cut(s) 378
NcoI CCATGG 1 cut(s) 1201
NdeI CATATG 2 cut(s) 939, 1522
NdeII GATC 4 cut(s) 56, 394, 886, 1791
NlaIV GGNNCC 1 cut(s) 718
NmuCI GTSAC 3 cut(s) 259, 388, 905
NsiI ATGCAT 3 cut(s) 532, 900, 1817
NspI RCATGY 4 cut(s) 194, 709, 762, 898
OliI CACNNNNGTG 1 cut(s) 117
PaeI GCATGC 1 cut(s) 709
PaqCI CACCTGC 1 cut(s) 1177
PciI ACATGT 1 cut(s) 190
PciSI GCTCTTC 1 cut(s) 641
PctI GAATGC 1 cut(s) 1978
PdmI GAANNNNTTC 2 cut(s) 278, 921
PfeI GAWTC 5 cut(s) 856, 1021, 1283, 1367, 1532
PfoI TCCNGGA 1 cut(s) 1930
PleI GAGTC 2 cut(s) 346, 1442
PpsI GAGTC 2 cut(s) 346, 1442
Ppu21I YACGTR 3 cut(s) 179, 779, 1082
PscI ACATGT 1 cut(s) 190
PshBI ATTAAT 1 cut(s) 471
Psp6I CCWGG 3 cut(s) 436, 1024, 1930
PspFI CCCAGC 1 cut(s) 50
PspGI CCWGG 3 cut(s) 436, 1024, 1930
PspN4I GGNNCC 1 cut(s) 718
PspPI GGNCC 1 cut(s) 1205
PstI CTGCAG 2 cut(s) 1054, 1174
RseI CAYNNNNRTG 4 cut(s) 99, 117, 903, 1117
SapI GCTCTTC 1 cut(s) 641
SaqAI TTAA 7 cut(s) 471, 534, 747, 1041, 1677, 1686, 1920
Sau3AI GATC 4 cut(s) 56, 394, 886, 1791
Sau96I GGNCC 1 cut(s) 1205
ScaI AGTACT 1 cut(s) 1099
SchI GAGTC 2 cut(s) 346, 1442
ScrFI CCNGG 4 cut(s) 378, 438, 1026, 1932
SduI GDGCHC 2 cut(s) 805, 1277
SfaNI GCATC 3 cut(s) 118, 517, 1681
SfcI CTRYAG 4 cut(s) 1050, 1170, 1230, 2021
SinI GGWCC 1 cut(s) 1205
SmiMI CAYNNNNRTG 4 cut(s) 99, 117, 903, 1117
SmlI CTYRAG 1 cut(s) 593
SmoI CTYRAG 1 cut(s) 593
SnaBI TACGTA 1 cut(s) 179
SpeI ACTAGT 2 cut(s) 902, 1094
SphI GCATGC 1 cut(s) 709
SsiI CCGC 2 cut(s) 314, 1116
SspI AATATT 1 cut(s) 745
SspMI CTAG 5 cut(s) 903, 984, 1095, 1143, 2004
StyD4I CCNGG 4 cut(s) 376, 436, 1024, 1930
StyI CCWWGG 1 cut(s) 1201
TaaI ACNGT 6 cut(s) 371, 553, 876, 1341, 2018, 2053
TaiI ACGT 7 cut(s) 181, 483, 781, 1037, 1078, 1084, 1108
TaqII GACCGA 1 cut(s) 24
TatI WGTACW 6 cut(s) 28, 371, 617, 770, 819, 1097
TfiI GAWTC 5 cut(s) 856, 1021, 1283, 1367, 1532
Tru1I TTAA 7 cut(s) 471, 534, 747, 1041, 1677, 1686, 1920
Tru9I TTAA 7 cut(s) 471, 534, 747, 1041, 1677, 1686, 1920
TscAI CASTG 3 cut(s) 142, 556, 916
TseFI GTSAC 3 cut(s) 259, 388, 905
Tsp45I GTSAC 3 cut(s) 259, 388, 905
TspDTI ATGAA 9 cut(s) 17, 428, 500, 645, 993, 1034, 1194, 1211, 1665
TspRI CASTG 3 cut(s) 142, 556, 916
VneI GTGCAC 1 cut(s) 801
VpaK11BI GGWCC 1 cut(s) 1205
VspI ATTAAT 1 cut(s) 471
XapI RAATTY 5 cut(s) 611, 992, 1266, 1332, 1497
XbaI TCTAGA 1 cut(s) 2003
XceI RCATGY 4 cut(s) 194, 709, 762, 898
XcmI CCANNNNNNNNNTGG 3 cut(s) 1325, 1490, 1709
XmiI GTMKAC 1 cut(s) 2020
XmnI GAANNNNTTC 2 cut(s) 278, 921
XspI CTAG 5 cut(s) 903, 984, 1095, 1143, 2004
ZraI GACGTC 1 cut(s) 1076
ZrmI AGTACT 1 cut(s) 1099
Zsp2I ATGCAT 3 cut(s) 532, 900, 1817
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.