Rmu_sc0004084.1_g000020

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004084.1
OG0000143
Physical Location & Seq
Forward (+)
87883 .. 92249
4367 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004084.1_g000020.1.cds

Sequence Viewer

Length: 2697 bp
atggagcatgtggctactacatcaacaagtcgtaataatgtagacagcggatgtagaagggattacactagtgaattcttcacgactgagacattcaacagcaaagaagagttaaaaatctgggccaaaaatgttgggaaggagaatggtattactattgtcgtgttaagatctgacagtggaaaaggcaaaaagaaagctagagttactttgggttgtgaaaggagcggaaaatgtgatggacgaaatagtagtccccaaaaaagtaaaacagttgagtctaaacgtcgacgtaccggaacaaagaagtgtgattgtcctttccgattaaggggtcatgagaagctagctgctggtaatgaatgggagctaacggtagatgttggaattcataatcatgcagcagaacgccccgagaggggcaattcattccagggtagattatgtcaagaggagaagtcagtggtgaaggataggtataaaagaggggagaagcctaagcagatattaaaagccctaaaagagatggacaaacacaacaaatccacagcgaggacaatatacaatgaacttcgtagtttgaagcgtagaactactgttaaggatgaattggaggatcaaagttttgtattgcgacaattaatgaataaggtaggggagtacgattatattgagaagcacagaactactccaacgaacgacaatgtcttggacttctttctgacacatcgcactagcatcgaattgttacgtgcatttccaactgttttgataatagacttataccgggagggggacacgcggacgtgggacacggtagagttttctggagttacgtcaactaatatggaattttgtgttgctacggctatcctttatccactacaagattgtagttttgaatgggccttaacttcattgcgaggtgtaatggatggtaatgatattgtcagacctggtattgtaattttcgacaccgagatgcatacattaatttttgatgagactctcgaccccataataaaagccattaacaaggtcttcagtacggctatacttttgttttgtacggattgcattgataactcagtggtagcggttggcatgtggcacggtgattccctggtgtccttggatacgaggtggaagttattgatagaatcccccactgaagccgatttcgatctacatttaaatttaatgcagctatgcaccaagctagatgtgtatacggagccagttattaaatttgttatagacactttcgtgcagccacataaggaaaaatttattgcagcatggacagataaagttatgcactttgggaatacaaaacgggcgacaagccgtcgcccctattggacattgccatccgactatattttggagtgttatttagatgattatgaaggttctgtagttgtaaagcagacagaaatcgacacatgtttgaaggaaatgcatagttacaatgagaaaactcgcctagaaattgacgattcgtttctggaatctttaatgaataagtacattaatggtgaagatgggctcaaggaccatggggccatttccatttatgcattgaacatgatccgtgagcagaccaagctagccaatgagatagatgatgaccatagtgagtgtggttgtgctataaaacgtacccatggcttaccatgtgcacatgaaattgccaagtacaagagagaaggtcgacctattccacttgaatgcatcaattcttattggaagaaacttccccgcttgaaacctttgagaaggaccagagagcccaatgtgtatgagacgctgaaacgacctaggttaagtgaggagatgaatacaaatgctctttcttctctatccttacctggcactgtggaatctgaacgtaattcaccgaatgcttgtttatcgagacaagagtcgcagccaggggatgaggtgtatgacatccaaccgactacgcaatttgagtttggagatgtatgtcaacatttattggggtcatatatccgtgatgtaaaggatgttctaggagatggccattgcggttttagagctatagcatcatttatgggttacagtgaagactctggatgggtgaaagtgcggaatgacttaagaaatgagcttatgctttactcggcttactatgaacaactccttggggatcgaagcgttgttaatgagctacttcatagattgaagtatgatgagattccttgtccagaggagcactggatgcgcattcccgacatggggcatgttattgcgtcttattataatgttgtactcgtgcatctgtcttctgatcagtgctttacattcttcccattaagaacttaccccttttcaacatcaccacctaaagagattgttattggatttgtcagagggcattttgtgcaggtatatttggaagcaggtcatccaatgcctccacctccagcccgcaccaaaaaatatcatgatgtagcatcggactggtgggaagaatttcaccgacaacgttccacagaatgggcaaatctatactccggtcgcttagagtatttcaaatcctcctcccagcccgagatcgtgtcacaaaagaatccaattgtgcttgattattctttgccttctgtagacaatatggattactattttgattctttgcaaggctcgggattgaacccttatcccatttcctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE

Protein Analysis

898

Amino Acids

103.29

Weight (kDa)

6.13

Isoelectric Point (pI)

45.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000143)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G76710 AT1G76710 AT1G76710 AT1G76710
fragaria_vesca FvH4_1g20063 FvH4_2g15231 FvH4_3g04011 FvH4_3g28681 FvH4_4g01411 FvH4_4g10181 FvH4_4g15922 FvH4_4g16651 FvH4_4g16652 FvH4_5g13892 FvH4_5g13893 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g25511 FvH4_6g12551 FvH4_6g12552 FvH4_6g38841 FvH4_7g04391
malus_domestica MD05G1031300.v1.1 MD05G1031400.v1.1 MD05G1031500.v1.1 MD08G1164400.v1.1 MD10G1032900.v1.1 MD10G1033000.v1.1 MD10G1033100.v1.1
prunus_persica Prupe.3G240700_v2.0.a1 Prupe.7G144600_v2.0.a1 Prupe.8G038500_v2.0.a1 Prupe.8G038500_v2.0.a1
pyrus_communis pycom05g02250 pycom05g02260 pycom05g02270 pycom05g02280 pycom08g14160 pycom10g02100 pycom10g02110 pycom10g02130
rosa_chinensis RchiOBHm_Chr1g0329481 RchiOBHm_Chr1g0329491 RchiOBHm_Chr1g0341531 RchiOBHm_Chr3g0464811 RchiOBHm_Chr3g0494701 RchiOBHm_Chr3g0497501 RchiOBHm_Chr4g0385841 RchiOBHm_Chr5g0061181 RchiOBHm_Chr6g0263001 RchiOBHm_Chr7g0193111 RchiOBHm_Chr7g0206281 RchiOBHm_Chr7g0206311
rosa_laevigata RLG00000018908 RLG00000028528 RLG00000028803 RLG00000029882 RLG00000029883 RLG00000030361
rosa_multiflora Rmu_co8196328.1_g000001 Rmu_co8259135.1_g000001 Rmu_co8269185.1_g000001 Rmu_sc0000076.1_g000019 Rmu_sc0000311.1_g000007 Rmu_sc0000429.1_g000038 Rmu_sc0000429.1_g000039 Rmu_sc0000429.1_g000040 Rmu_sc0000511.1_g000005 Rmu_sc0000539.1_g000054 Rmu_sc0000566.1_g000039 Rmu_sc0000805.1_g000032 Rmu_sc0000870.1_g000073 Rmu_sc0000870.1_g000074 Rmu_sc0001010.1_g000018 Rmu_sc0001083.1_g000013 Rmu_sc0001114.1_g000011 Rmu_sc0001702.1_g000027 Rmu_sc0001779.1_g000012 Rmu_sc0002923.1_g000036 Rmu_sc0003242.1_g000011 Rmu_sc0003291.1_g000036 Rmu_sc0003393.1_g000012 Rmu_sc0003872.1_g000016 Rmu_sc0003872.1_g000017 Rmu_sc0003872.1_g000018 Rmu_sc0004084.1_g000020 Rmu_sc0004386.1_g000005 Rmu_sc0004622.1_g000005 Rmu_sc0004742.1_g000021 Rmu_sc0004755.1_g000020 Rmu_sc0004805.1_g000036 Rmu_sc0005065.1_g000006 Rmu_sc0005177.1_g000004 Rmu_sc0006373.1_g000003 Rmu_sc0006373.1_g000004 Rmu_sc0007121.1_g000002 Rmu_sc0007943.1_g000003 Rmu_sc0010368.1_g000006 Rmu_sc0010543.1_g000001 Rmu_sc0012591.1_g000006 Rmu_sc0013504.1_g000009 Rmu_sc0015025.1_g000001 Rmu_sc0016170.1_g000001 Rmu_sc0017156.1_g000001 Rmu_sc0026439.1_g000001
rosa_roxburghii Rroxscaffold_175G00432280 Rroxscaffold_1G00030190 Rroxscaffold_1G00030880 Rroxscaffold_2G00090520 Rroxscaffold_3G00227940 Rroxscaffold_3G00233400 Rroxscaffold_3G00238500 Rroxscaffold_3G00251650 Rroxscaffold_4G00301570 Rroxscaffold_4G00321040 Rroxscaffold_5G00350880 Rroxscaffold_7G00184400
rosa_rugosa Rorug01G0080800 Rorug01G0080900 Rorug01G0193900 Rorug02G0275900 Rorug02G0275900 Rorug02G0275900 Rorug02G0305400 Rorug02G0311800 Rorug02G0350400 Rorug02G0381300 Rorug03G0136700 Rorug03G0181900 Rorug03G0268000 Rorug04G0301600 Rorug05G0175100 Rorug05G0250700 Rorug05G0298200 Rorug05G0596000 Rorug06G0029500 Rorug07G0094300 Rorug07G0094300 Rorug07G0095400 Rorug07G0140100
rosa_samantha Rh1AG099200 Rh1AG190500 Rh1BG078900 Rh1BG079000 Rh1BG079100 Rh1CG084600 Rh1CG084700 Rh1CG095300 Rh1CG175900 Rh1DG103300 Rh1DG150400 Rh2AG079300 Rh2AG272400 Rh2AG464800 Rh2AG507400 Rh2DG078300 Rh2DG078400 Rh3CG206900 Rh3CG295400 Rh3DG206800 Rh3DG356200 Rh4CG071500 Rh4CG179200 Rh4DG064700 Rh5CG362400 Rh7AG212300 Rh7AG226200 Rh7BG222200
rosa_wichuraiana Rw0G009990 Rw0G011260 Rw0G011270 Rw0G012910 Rw0G013740 Rw1G007740 Rw1G013050 Rw1G014230 Rw2G014270 Rw3G012720 Rw3G028110 Rw4G006630 Rw4G015270 Rw4G016160 Rw4G031380 Rw5G011440 Rw5G029180 Rw5G048360 Rw5G048430 Rw5G048780 Rw6G005250 Rw6G006390 Rw7G002840 Rw7G014080 Rw7G019650 Rw7G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2286
Acc16I TGCGCA 1 cut(s) 2249
Acc36I ACCTGC 2 cut(s) 2401, 2417
AccB7I CCANNNNNTGG 1 cut(s) 2523
AccBSI CCGCTC 1 cut(s) 228
AccI GTMKAC 5 cut(s) 42, 289, 1229, 1714, 2631
AccII CGCG 1 cut(s) 802
AciI CCGC 8 cut(s) 48, 228, 802, 1097, 1762, 2052, 2113, 2455
AclI AACGTT 1 cut(s) 2512
AclWI GGATC 3 cut(s) 624, 1585, 2181
AcoI YGGCCR 1 cut(s) 2044
AcsI RAATTY 7 cut(s) 74, 387, 851, 1195, 1247, 1286, 2498
AcuI CTGAAG 2 cut(s) 1027, 1191
AfaI GTAC 8 cut(s) 295, 662, 1048, 1069, 1529, 1663, 1700, 2295
AfiI CCNNNNNNNGG 8 cut(s) 331, 418, 419, 552, 793, 2261, 2262, 2523
AflII CTTAAG 1 cut(s) 2122
AflIII ACRYGT 1 cut(s) 1445
AhdI GACNNNNNGTC 1 cut(s) 1347
AhlI ACTAGT 1 cut(s) 68
AjiI CACGTC 1 cut(s) 807
AjnI CCWGG 5 cut(s) 432, 955, 1122, 1870, 1933
AjuI GAANNNNNNNTTGG 2 cut(s) 2151, 2183
AleI CACNNNNGTG 1 cut(s) 1265
Alw21I GWGCWC 2 cut(s) 1684, 2241
Alw26I GTCTC 4 cut(s) 83, 998, 1799, 1912
Alw44I GTGCAC 1 cut(s) 1680
AlwI GGATC 3 cut(s) 624, 1585, 2181
Ama87I CYCGRG 3 cut(s) 413, 2576, 2668
AoxI GGCC 4 cut(s) 123, 906, 1563, 2044
ApaLI GTGCAC 1 cut(s) 1680
ApeKI GCWGC 6 cut(s) 350, 401, 1204, 1270, 1295, 1930
ApoI RAATTY 7 cut(s) 74, 387, 851, 1195, 1247, 1286, 2498
ArsI GACNNNNNNTTYG 2 cut(s) 238, 270
AseI ATTAAT 3 cut(s) 641, 992, 1533
Asp700I GAANNNNTTC 1 cut(s) 2499
AspA2I CCTAGG 1 cut(s) 1820
AspLEI GCGC 1 cut(s) 2250
AspS9I GGNCC 5 cut(s) 123, 906, 1555, 1563, 1782
AsuC2I CCSGG 1 cut(s) 788
AsuHPI GGTGA 7 cut(s) 478, 1127, 1550, 1890, 2116, 2355, 2495
AsuNHI GCTAGC 2 cut(s) 346, 1609
AvaI CYCGRG 3 cut(s) 413, 2576, 2668
AvaII GGWCC 2 cut(s) 1555, 1782
AvrII CCTAGG 1 cut(s) 1820
BaeGI GKGCMC 1 cut(s) 1684
BalI TGGCCA 1 cut(s) 2046
BanII GRGCYC 2 cut(s) 1551, 1794
BauI CACGAG 1 cut(s) 2297
BbsI GAAGAC 3 cut(s) 1033, 2097, 2301
Bbv12I GWGCWC 2 cut(s) 1684, 2241
BbvI GCAGC 6 cut(s) 337, 413, 1216, 1282, 1307, 1942
BccI CCATC 7 cut(s) 233, 520, 929, 1378, 1538, 2036, 2094
BceAI ACGGC 3 cut(s) 882, 1065, 1332
BcgI CGANNNNNNTGC 2 cut(s) 721, 755
BciT130I CCWGG 5 cut(s) 434, 957, 1124, 1872, 1935
BciVI GTATCC 1 cut(s) 1129
BclI TGATCA 1 cut(s) 2314
BcnI CCSGG 1 cut(s) 788
BcoDI GTCTC 4 cut(s) 83, 998, 1799, 1912
BcuI ACTAGT 1 cut(s) 68
BfaI CTAG 9 cut(s) 69, 201, 347, 735, 1220, 1487, 1610, 1821, 2036
BfmI CTRYAG 3 cut(s) 1416, 2064, 2628
BfrI CTTAAG 1 cut(s) 2122
BfuAI ACCTGC 2 cut(s) 2401, 2417
BfuI GTATCC 1 cut(s) 1129
BglII AGATCT 1 cut(s) 170
BisI GCNGC 6 cut(s) 351, 402, 1205, 1271, 1296, 1931
BlnI CCTAGG 1 cut(s) 1820
BlsI GCNGC 6 cut(s) 352, 403, 1206, 1272, 1297, 1932
Bme1390I CCNGG 6 cut(s) 434, 788, 957, 1124, 1872, 1935
Bme18I GGWCC 2 cut(s) 1555, 1782
BmeRI GACNNNNNGTC 1 cut(s) 1347
BmeT110I CYCGRG 3 cut(s) 413, 2576, 2668
BmgBI CACGTC 1 cut(s) 807
BmgT120I GGNCC 5 cut(s) 123, 906, 1555, 1563, 1782
BmiI GGNNCC 2 cut(s) 1236, 1564
BmrFI CCNGG 6 cut(s) 434, 788, 957, 1124, 1872, 1935
BmsI GCATC 7 cut(s) 747, 972, 1743, 2078, 2235, 2311, 2489
BmtI GCTAGC 2 cut(s) 350, 1613
BoxI GACNNNNGTC 1 cut(s) 1924
BpiI GAAGAC 3 cut(s) 1033, 2097, 2301
BpmI CTGGAG 2 cut(s) 849, 2433
Bpu10I CCTNAGC 1 cut(s) 498
BpuEI CTTGAG 1 cut(s) 1535
BpuMI CCSGG 1 cut(s) 788
BsaAI YACGTR 1 cut(s) 752
BsaBI GATNNNNATC 1 cut(s) 1182
BsaJI CCNNGG 8 cut(s) 433, 1122, 1131, 1558, 1666, 1820, 1934, 2167
BsaWI WCCGGW 2 cut(s) 296, 2540
Bsc4I CCNNNNNNNGG 8 cut(s) 331, 418, 419, 552, 793, 2261, 2262, 2523
Bse1I ACTGG 3 cut(s) 1238, 2246, 2492
Bse3DI GCAATG 3 cut(s) 917, 1364, 2047
Bse8I GATNNNNATC 1 cut(s) 1182
BseBI CCWGG 5 cut(s) 434, 957, 1124, 1872, 1935
BseDI CCNNGG 8 cut(s) 433, 1122, 1131, 1558, 1666, 1820, 1934, 2167
BseJI GATNNNNATC 1 cut(s) 1182
BseLI CCNNNNNNNGG 8 cut(s) 331, 418, 419, 552, 793, 2261, 2262, 2523
BseMI GCAATG 3 cut(s) 917, 1364, 2047
BseMII CTCAG 2 cut(s) 78, 1101
BseNI ACTGG 3 cut(s) 1238, 2246, 2492
BseRI GAGGAG 4 cut(s) 467, 1847, 2249, 2557
BseSI GKGCMC 1 cut(s) 1684
BseXI GCAGC 6 cut(s) 337, 413, 1216, 1282, 1307, 1942
BseYI CCCAGC 1 cut(s) 2571
BsgI GTGCAG 2 cut(s) 1289, 2429
Bsh1236I CGCG 1 cut(s) 802
Bsh1285I CGRYCG 1 cut(s) 2545
BshFI GGCC 4 cut(s) 125, 908, 1565, 2046
BsiEI CGRYCG 1 cut(s) 2545
BsiHKAI GWGCWC 2 cut(s) 1684, 2241
BsiHKCI CYCGRG 3 cut(s) 413, 2576, 2668
BsiSI CCGG 3 cut(s) 297, 787, 2541
BslFI GGGAC 3 cut(s) 240, 809, 824
BslI CCNNNNNNNGG 8 cut(s) 331, 418, 419, 552, 793, 2261, 2262, 2523
BsmAI GTCTC 4 cut(s) 83, 998, 1799, 1912
BsmBI CGTCTC 1 cut(s) 1799
BsmFI GGGAC 3 cut(s) 240, 809, 824
BsmI GAATGC 3 cut(s) 1736, 1909, 2250
BsnI GGCC 4 cut(s) 125, 908, 1565, 2046
BsoBI CYCGRG 3 cut(s) 413, 2576, 2668
Bsp1286I GDGCHC 4 cut(s) 1551, 1684, 1794, 2241
Bsp143I GATC 7 cut(s) 170, 616, 1183, 1590, 2173, 2314, 2580
Bsp19I CCATGG 2 cut(s) 1558, 1666
BspACI CCGC 8 cut(s) 48, 228, 802, 1097, 1762, 2052, 2113, 2455
BspANI GGCC 4 cut(s) 125, 908, 1565, 2046
BspCNI CTCAG 2 cut(s) 79, 1100
BspFNI CGCG 1 cut(s) 802
BspHI TCATGA 2 cut(s) 337, 2470
BspLI GGNNCC 2 cut(s) 1236, 1564
BspMI ACCTGC 2 cut(s) 2401, 2417
BspOI GCTAGC 2 cut(s) 350, 1613
BspPI GGATC 3 cut(s) 624, 1585, 2181
BspTI CTTAAG 1 cut(s) 2122
BsrBI CCGCTC 1 cut(s) 228
BsrDI GCAATG 3 cut(s) 917, 1364, 2047
BsrI ACTGG 3 cut(s) 1238, 2246, 2492
BssECI CCNNGG 8 cut(s) 433, 1122, 1131, 1558, 1666, 1820, 1934, 2167
BssMI GATC 7 cut(s) 170, 616, 1183, 1590, 2173, 2314, 2580
BssNAI GTATAC 1 cut(s) 1230
BssSI CACGAG 1 cut(s) 2297
BssT1I CCWWGG 5 cut(s) 1131, 1558, 1666, 1820, 2167
Bst1107I GTATAC 1 cut(s) 1230
Bst2BI CACGAG 1 cut(s) 2297
Bst2UI CCWGG 5 cut(s) 434, 957, 1124, 1872, 1935
Bst4CI ACNGT 9 cut(s) 179, 274, 376, 598, 766, 817, 1115, 1879, 2087
Bst6I CTCTTC 1 cut(s) 102
BstAFI CTTAAG 1 cut(s) 2122
BstAPI GCANNNNNTGC 2 cut(s) 2245, 2407
BstBAI YACGTR 1 cut(s) 752
BstC8I GCNNGC 3 cut(s) 348, 1611, 2455
BstDEI CTNAG 4 cut(s) 87, 498, 1087, 2548
BstDSI CCRYGG 2 cut(s) 1558, 1666
BstFNI CGCG 1 cut(s) 802
BstHHI GCGC 1 cut(s) 2250
BstKTI GATC 7 cut(s) 173, 619, 1186, 1593, 2176, 2317, 2583
BstMAI GTCTC 4 cut(s) 83, 998, 1799, 1912
BstMBI GATC 7 cut(s) 170, 616, 1183, 1590, 2173, 2314, 2580
BstMCI CGRYCG 1 cut(s) 2545
BstMWI GCNNNNNNNGC 3 cut(s) 1606, 2245, 2407
BstNI CCWGG 5 cut(s) 434, 957, 1124, 1872, 1935
BstNSI RCATGY 4 cut(s) 11, 1108, 1449, 2270
BstPAI GACNNNNGTC 1 cut(s) 1924
BstSCI CCNGG 6 cut(s) 432, 786, 955, 1122, 1870, 1933
BstSFI CTRYAG 3 cut(s) 1416, 2064, 2628
BstSLI GKGCMC 1 cut(s) 1684
BstUI CGCG 1 cut(s) 802
BstV1I GCAGC 6 cut(s) 337, 413, 1216, 1282, 1307, 1942
BstV2I GAAGAC 3 cut(s) 1033, 2097, 2301
BstX2I RGATCY 1 cut(s) 170
BstYI RGATCY 1 cut(s) 170
BstZ17I GTATAC 1 cut(s) 1230
BsuI GTATCC 1 cut(s) 1129
BsuRI GGCC 4 cut(s) 125, 908, 1565, 2046
BtgI CCRYGG 2 cut(s) 1558, 1666
BtgZI GCGATG 1 cut(s) 713
BtrI CACGTC 1 cut(s) 807
BtsIMutI CAGTG 8 cut(s) 184, 468, 1095, 1167, 1875, 2092, 2239, 2324
BveI ACCTGC 2 cut(s) 2401, 2417
Cac8I GCNNGC 3 cut(s) 348, 1611, 2455
CciI TCATGA 2 cut(s) 337, 2470
CfoI GCGC 1 cut(s) 2250
Cfr13I GGNCC 5 cut(s) 123, 906, 1555, 1563, 1782
CseI GACGC 2 cut(s) 1816, 2265
CsiI ACCWGGT 1 cut(s) 955
Csp6I GTAC 8 cut(s) 294, 661, 1047, 1068, 1528, 1662, 1699, 2294
CviQI GTAC 8 cut(s) 294, 661, 1047, 1068, 1528, 1662, 1699, 2294
DdeI CTNAG 4 cut(s) 87, 498, 1087, 2548
DpnI GATC 7 cut(s) 172, 618, 1185, 1592, 2175, 2316, 2582
DpnII GATC 7 cut(s) 170, 616, 1183, 1590, 2173, 2314, 2580
DraI TTTAAA 1 cut(s) 1194
DriI GACNNNNNGTC 1 cut(s) 1347
EaeI YGGCCR 1 cut(s) 2044
Eam1104I CTCTTC 1 cut(s) 102
Eam1105I GACNNNNNGTC 1 cut(s) 1347
EarI CTCTTC 1 cut(s) 102
Eco130I CCWWGG 5 cut(s) 1131, 1558, 1666, 1820, 2167
Eco24I GRGCYC 2 cut(s) 1551, 1794
Eco47I GGWCC 2 cut(s) 1555, 1782
Eco57I CTGAAG 2 cut(s) 1027, 1191
Eco88I CYCGRG 3 cut(s) 413, 2576, 2668
EcoRI GAATTC 2 cut(s) 74, 387
EcoRII CCWGG 5 cut(s) 432, 955, 1122, 1870, 1933
EcoT14I CCWWGG 5 cut(s) 1131, 1558, 1666, 1820, 2167
EcoT22I ATGCAT 4 cut(s) 987, 1464, 1582, 1736
EcoT38I GRGCYC 2 cut(s) 1551, 1794
ErhI CCWWGG 5 cut(s) 1131, 1558, 1666, 1820, 2167
Esp3I CGTCTC 1 cut(s) 1799
FaqI GGGAC 3 cut(s) 240, 809, 824
FauI CCCGC 2 cut(s) 1769, 2462
FbaI TGATCA 1 cut(s) 2314
FblI GTMKAC 5 cut(s) 42, 289, 1229, 1714, 2631
Fnu4HI GCNGC 6 cut(s) 351, 402, 1205, 1271, 1296, 1931
FriOI GRGCYC 2 cut(s) 1551, 1794
Fsp4HI GCNGC 6 cut(s) 351, 402, 1205, 1271, 1296, 1931
FspAI RTGCGCAY 1 cut(s) 2249
FspBI CTAG 9 cut(s) 69, 201, 347, 735, 1220, 1487, 1610, 1821, 2036
FspI TGCGCA 1 cut(s) 2249
GlaI GCGC 1 cut(s) 2249
GluI GCNGC 6 cut(s) 351, 402, 1205, 1271, 1296, 1931
GsaI CCCAGC 1 cut(s) 2575
GsuI CTGGAG 2 cut(s) 849, 2433
HaeIII GGCC 4 cut(s) 125, 908, 1565, 2046
HapII CCGG 3 cut(s) 297, 787, 2541
HgaI GACGC 2 cut(s) 1816, 2265
HhaI GCGC 1 cut(s) 2250
Hin6I GCGC 1 cut(s) 2248
HinP1I GCGC 1 cut(s) 2248
HincII GTYRAC 4 cut(s) 290, 840, 1715, 1994
HindII GTYRAC 4 cut(s) 290, 840, 1715, 1994
HpaII CCGG 3 cut(s) 297, 787, 2541
HphI GGTGA 7 cut(s) 478, 1127, 1550, 1890, 2116, 2355, 2495
Hpy166II GTNNAC 8 cut(s) 43, 290, 840, 1230, 1682, 1715, 1994, 2632
Hpy188I TCNGA 9 cut(s) 175, 326, 723, 953, 1375, 1888, 2314, 2396, 2485
Hpy8I GTNNAC 8 cut(s) 43, 290, 840, 1230, 1682, 1715, 1994, 2632
Hpy99I CGWCG 3 cut(s) 291, 294, 1353
HpyAV CCTTC 8 cut(s) 51, 133, 463, 1403, 1447, 1703, 1773, 2634
HpyCH4III ACNGT 9 cut(s) 179, 274, 376, 598, 766, 817, 1115, 1879, 2087
HpyCH4IV ACGT 8 cut(s) 286, 292, 751, 806, 836, 1660, 1891, 2512
HpyF10VI GCNNNNNNNGC 3 cut(s) 1606, 2245, 2407
HpyF3I CTNAG 4 cut(s) 87, 498, 1087, 2548
HpySE526I ACGT 8 cut(s) 286, 292, 751, 806, 836, 1660, 1891, 2512
HspAI GCGC 1 cut(s) 2248
Ksp22I TGATCA 1 cut(s) 2314
Kzo9I GATC 7 cut(s) 170, 616, 1183, 1590, 2173, 2314, 2580
LmnI GCTCC 5 cut(s) 4, 225, 367, 1234, 2236
Lsp1109I GCAGC 6 cut(s) 337, 413, 1216, 1282, 1307, 1942
LweI GCATC 7 cut(s) 747, 972, 1743, 2078, 2235, 2311, 2489
MabI ACCWGGT 1 cut(s) 955
MaeI CTAG 9 cut(s) 69, 201, 347, 735, 1220, 1487, 1610, 1821, 2036
MaeII ACGT 8 cut(s) 286, 292, 751, 806, 836, 1660, 1891, 2512
MaeIII GTNAC 6 cut(s) 205, 747, 832, 1466, 2081, 2586
MalI GATC 7 cut(s) 172, 618, 1185, 1592, 2175, 2316, 2582
MbiI CCGCTC 1 cut(s) 228
MboI GATC 7 cut(s) 170, 616, 1183, 1590, 2173, 2314, 2580
MfeI CAATTG 1 cut(s) 2601
MflI RGATCY 1 cut(s) 170
MhlI GDGCHC 4 cut(s) 1551, 1684, 1794, 2241
MlsI TGGCCA 1 cut(s) 2046
MluNI TGGCCA 1 cut(s) 2046
MlyI GAGTC 4 cut(s) 287, 1000, 1934, 2087
MmeI TCCRAC 5 cut(s) 364, 716, 785, 1398, 1981
Mox20I TGGCCA 1 cut(s) 2046
Mph1103I ATGCAT 4 cut(s) 987, 1464, 1582, 1736
MroXI GAANNNNTTC 1 cut(s) 2499
MscI TGGCCA 1 cut(s) 2046
MslI CAYNNNNRTG 4 cut(s) 396, 980, 1265, 1729
Msp20I TGGCCA 1 cut(s) 2046
MspA1I CMGCKG 1 cut(s) 48
MspCI CTTAAG 1 cut(s) 2122
MspI CCGG 3 cut(s) 297, 787, 2541
MspR9I CCNGG 6 cut(s) 434, 788, 957, 1124, 1872, 1935
MunI CAATTG 1 cut(s) 2601
Mva1269I GAATGC 3 cut(s) 1736, 1909, 2250
MvaI CCWGG 5 cut(s) 434, 957, 1124, 1872, 1935
MvnI CGCG 1 cut(s) 802
MwoI GCNNNNNNNGC 3 cut(s) 1606, 2245, 2407
NciI CCSGG 1 cut(s) 788
NcoI CCATGG 2 cut(s) 1558, 1666
NdeII GATC 7 cut(s) 170, 616, 1183, 1590, 2173, 2314, 2580
NheI GCTAGC 2 cut(s) 346, 1609
NlaIV GGNNCC 2 cut(s) 1236, 1564
NmeAIII GCCGAG 1 cut(s) 2126
NmuCI GTSAC 1 cut(s) 2586
NsbI TGCGCA 1 cut(s) 2249
NsiI ATGCAT 4 cut(s) 987, 1464, 1582, 1736
NspI RCATGY 4 cut(s) 11, 1108, 1449, 2270
OliI CACNNNNGTG 1 cut(s) 1265
PagI TCATGA 2 cut(s) 337, 2470
PciI ACATGT 1 cut(s) 1445
PctI GAATGC 3 cut(s) 1736, 1909, 2250
PdmI GAANNNNTTC 1 cut(s) 2499
PfeI GAWTC 8 cut(s) 1118, 1160, 1499, 1511, 1883, 2221, 2596, 2654
PflFI GACNNNGTC 1 cut(s) 704
PflMI CCANNNNNTGG 1 cut(s) 2523
PkrI GCNGC 6 cut(s) 352, 403, 1206, 1272, 1297, 1932
PleI GAGTC 4 cut(s) 286, 1000, 1933, 2087
PpsI GAGTC 4 cut(s) 286, 1000, 1933, 2087
Ppu21I YACGTR 1 cut(s) 752
PscI ACATGT 1 cut(s) 1445
PshAI GACNNNNGTC 1 cut(s) 1924
PshBI ATTAAT 3 cut(s) 641, 992, 1533
PsiI TTATAA 1 cut(s) 2286
Psp1406I AACGTT 1 cut(s) 2512
Psp6I CCWGG 5 cut(s) 432, 955, 1122, 1870, 1933
PspFI CCCAGC 1 cut(s) 2571
PspGI CCWGG 5 cut(s) 432, 955, 1122, 1870, 1933
PspN4I GGNNCC 2 cut(s) 1236, 1564
PspPI GGNCC 5 cut(s) 123, 906, 1555, 1563, 1782
PsrI GAACNNNNNNTAC 2 cut(s) 2016, 2048
PsuI RGATCY 1 cut(s) 170
PsyI GACNNNGTC 1 cut(s) 704
RsaI GTAC 8 cut(s) 295, 662, 1048, 1069, 1529, 1663, 1700, 2295
RsaNI GTAC 8 cut(s) 294, 661, 1047, 1068, 1528, 1662, 1699, 2294
RseI CAYNNNNRTG 4 cut(s) 396, 980, 1265, 1729
SalI GTCGAC 2 cut(s) 288, 1713
SatI GCNGC 6 cut(s) 351, 402, 1205, 1271, 1296, 1931
Sau3AI GATC 7 cut(s) 170, 616, 1183, 1590, 2173, 2314, 2580
Sau96I GGNCC 5 cut(s) 123, 906, 1555, 1563, 1782
SchI GAGTC 4 cut(s) 287, 1000, 1934, 2087
ScrFI CCNGG 6 cut(s) 434, 788, 957, 1124, 1872, 1935
SduI GDGCHC 4 cut(s) 1551, 1684, 1794, 2241
SexAI ACCWGGT 1 cut(s) 955
SfaNI GCATC 7 cut(s) 747, 972, 1743, 2078, 2235, 2311, 2489
SfcI CTRYAG 3 cut(s) 1416, 2064, 2628
SgrDI CGTCGACG 1 cut(s) 288
SinI GGWCC 2 cut(s) 1555, 1782
SmiI ATTTAAAT 1 cut(s) 1194
SmiMI CAYNNNNRTG 4 cut(s) 396, 980, 1265, 1729
SmlI CTYRAG 2 cut(s) 1550, 2122
SmoI CTYRAG 2 cut(s) 1550, 2122
SpeI ACTAGT 1 cut(s) 68
SsiI CCGC 8 cut(s) 48, 228, 802, 1097, 1762, 2052, 2113, 2455
SspMI CTAG 9 cut(s) 69, 201, 347, 735, 1220, 1487, 1610, 1821, 2036
StyD4I CCNGG 6 cut(s) 432, 786, 955, 1122, 1870, 1933
StyI CCWWGG 5 cut(s) 1131, 1558, 1666, 1820, 2167
SwaI ATTTAAAT 1 cut(s) 1194
TaaI ACNGT 9 cut(s) 179, 274, 376, 598, 766, 817, 1115, 1879, 2087
TaiI ACGT 8 cut(s) 289, 295, 754, 809, 839, 1663, 1894, 2515
TaqI TCGA 9 cut(s) 289, 741, 972, 1011, 1182, 1440, 1714, 1916, 2176
TatI WGTACW 3 cut(s) 1527, 1698, 2293
TfiI GAWTC 8 cut(s) 1118, 1160, 1499, 1511, 1883, 2221, 2596, 2654
TscAI CASTG 8 cut(s) 184, 468, 1095, 1174, 1882, 2092, 2246, 2324
TseFI GTSAC 1 cut(s) 2586
TseI GCWGC 6 cut(s) 350, 401, 1204, 1270, 1295, 1930
Tsp45I GTSAC 1 cut(s) 2586
TspGWI ACGGA 4 cut(s) 1085, 1247, 1583, 2006
TspRI CASTG 8 cut(s) 184, 468, 1095, 1174, 1882, 2092, 2246, 2324
Tth111I GACNNNGTC 1 cut(s) 704
Van91I CCANNNNNTGG 1 cut(s) 2523
Vha464I CTTAAG 1 cut(s) 2122
VneI GTGCAC 1 cut(s) 1680
VpaK11BI GGWCC 2 cut(s) 1555, 1782
VspI ATTAAT 3 cut(s) 641, 992, 1533
XapI RAATTY 7 cut(s) 74, 387, 851, 1195, 1247, 1286, 2498
XceI RCATGY 4 cut(s) 11, 1108, 1449, 2270
XcmI CCANNNNNNNNNTGG 2 cut(s) 1640, 2238
XmaJI CCTAGG 1 cut(s) 1820
XmiI GTMKAC 5 cut(s) 42, 289, 1229, 1714, 2631
XmnI GAANNNNTTC 1 cut(s) 2499
XspI CTAG 9 cut(s) 69, 201, 347, 735, 1220, 1487, 1610, 1821, 2036
Zsp2I ATGCAT 4 cut(s) 987, 1464, 1582, 1736
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.