isoform X1
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 557 |
| Acc16I | TGCGCA | 1 cut(s) | 270 |
| AccII | CGCG | 2 cut(s) | 61, 106 |
| AciI | CCGC | 2 cut(s) | 104, 106 |
| AclWI | GGATC | 1 cut(s) | 200 |
| AfaI | GTAC | 4 cut(s) | 91, 110, 243, 413 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 99 |
| AflIII | ACRYGT | 1 cut(s) | 600 |
| AgsI | TTSAA | 4 cut(s) | 47, 238, 683, 726 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 603, 635 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 687, 719 |
| AluBI | AGCT | 5 cut(s) | 67, 374, 661, 698, 729 |
| AluI | AGCT | 5 cut(s) | 67, 374, 661, 698, 729 |
| Alw26I | GTCTC | 3 cut(s) | 482, 578, 759 |
| AlwI | GGATC | 1 cut(s) | 200 |
| AoxI | GGCC | 1 cut(s) | 101 |
| ApeKI | GCWGC | 2 cut(s) | 67, 708 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 662, 694 |
| AspLEI | GCGC | 3 cut(s) | 61, 63, 271 |
| AspS9I | GGNCC | 1 cut(s) | 101 |
| BauI | CACGAG | 1 cut(s) | 756 |
| BbsI | GAAGAC | 1 cut(s) | 151 |
| BbvI | GCAGC | 2 cut(s) | 54, 695 |
| BcoDI | GTCTC | 3 cut(s) | 482, 578, 759 |
| BglII | AGATCT | 1 cut(s) | 452 |
| BisI | GCNGC | 3 cut(s) | 68, 104, 709 |
| BlsI | GCNGC | 3 cut(s) | 69, 105, 710 |
| BmcAI | AGTACT | 1 cut(s) | 413 |
| BmgT120I | GGNCC | 1 cut(s) | 101 |
| BmsI | GCATC | 2 cut(s) | 475, 514 |
| BpiI | GAAGAC | 1 cut(s) | 151 |
| Bpu10I | CCTNAGC | 1 cut(s) | 699 |
| BpuEI | CTTGAG | 1 cut(s) | 456 |
| BsaI | GGTCTC | 1 cut(s) | 482 |
| BsaJI | CCNNGG | 1 cut(s) | 104 |
| BsaWI | WCCGGW | 1 cut(s) | 92 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 687, 717 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 99 |
| Bse3DI | GCAATG | 1 cut(s) | 271 |
| BseDI | CCNNGG | 1 cut(s) | 104 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 99 |
| BseMI | GCAATG | 1 cut(s) | 271 |
| BseMII | CTCAG | 1 cut(s) | 648 |
| BsePI | GCGCGC | 1 cut(s) | 59 |
| BseRI | GAGGAG | 1 cut(s) | 179 |
| BseXI | GCAGC | 2 cut(s) | 54, 695 |
| Bsh1236I | CGCG | 2 cut(s) | 61, 106 |
| BshFI | GGCC | 1 cut(s) | 103 |
| BsiSI | CCGG | 1 cut(s) | 93 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 99 |
| BsmAI | GTCTC | 3 cut(s) | 482, 578, 759 |
| BsmI | GAATGC | 2 cut(s) | 191, 263 |
| BsnI | GGCC | 1 cut(s) | 103 |
| Bso31I | GGTCTC | 1 cut(s) | 482 |
| Bsp143I | GATC | 3 cut(s) | 16, 205, 452 |
| BspACI | CCGC | 2 cut(s) | 104, 106 |
| BspANI | GGCC | 1 cut(s) | 103 |
| BspCNI | CTCAG | 1 cut(s) | 649 |
| BspFNI | CGCG | 2 cut(s) | 61, 106 |
| BspPI | GGATC | 1 cut(s) | 200 |
| BspTNI | GGTCTC | 1 cut(s) | 482 |
| BsrDI | GCAATG | 1 cut(s) | 271 |
| BssECI | CCNNGG | 1 cut(s) | 104 |
| BssHII | GCGCGC | 1 cut(s) | 59 |
| BssMI | GATC | 3 cut(s) | 16, 205, 452 |
| BssSI | CACGAG | 1 cut(s) | 756 |
| Bst2BI | CACGAG | 1 cut(s) | 756 |
| Bst4CI | ACNGT | 2 cut(s) | 56, 87 |
| BstC8I | GCNNGC | 3 cut(s) | 61, 65, 663 |
| BstDEI | CTNAG | 2 cut(s) | 657, 699 |
| BstDSI | CCRYGG | 1 cut(s) | 104 |
| BstFNI | CGCG | 2 cut(s) | 61, 106 |
| BstHHI | GCGC | 3 cut(s) | 61, 63, 271 |
| BstKTI | GATC | 3 cut(s) | 19, 208, 455 |
| BstMAI | GTCTC | 3 cut(s) | 482, 578, 759 |
| BstMBI | GATC | 3 cut(s) | 16, 205, 452 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 67 |
| BstNSI | RCATGY | 1 cut(s) | 222 |
| BstUI | CGCG | 2 cut(s) | 61, 106 |
| BstV1I | GCAGC | 2 cut(s) | 54, 695 |
| BstV2I | GAAGAC | 1 cut(s) | 151 |
| BstX2I | RGATCY | 1 cut(s) | 452 |
| BstYI | RGATCY | 1 cut(s) | 452 |
| BsuRI | GGCC | 1 cut(s) | 103 |
| BtgI | CCRYGG | 1 cut(s) | 104 |
| BtsIMutI | CAGTG | 3 cut(s) | 27, 52, 92 |
| Cac8I | GCNNGC | 3 cut(s) | 61, 65, 663 |
| CfoI | GCGC | 3 cut(s) | 61, 63, 271 |
| Cfr13I | GGNCC | 1 cut(s) | 101 |
| Cfr42I | CCGCGG | 1 cut(s) | 107 |
| Csp6I | GTAC | 4 cut(s) | 90, 109, 242, 412 |
| CviAII | CATG | 3 cut(s) | 219, 432, 567 |
| CviJI | RGCY | 6 cut(s) | 67, 103, 374, 661, 698, 729 |
| CviKI_1 | RGCY | 6 cut(s) | 67, 103, 374, 661, 698, 729 |
| CviQI | GTAC | 4 cut(s) | 90, 109, 242, 412 |
| DdeI | CTNAG | 2 cut(s) | 657, 699 |
| DpnI | GATC | 3 cut(s) | 18, 207, 454 |
| DpnII | GATC | 3 cut(s) | 16, 205, 452 |
| DraI | TTTAAA | 1 cut(s) | 343 |
| Eco31I | GGTCTC | 1 cut(s) | 482 |
| Eco32I | GATATC | 1 cut(s) | 429 |
| EcoRV | GATATC | 1 cut(s) | 429 |
| EcoT22I | ATGCAT | 1 cut(s) | 490 |
| FaeI | CATG | 3 cut(s) | 222, 435, 570 |
| FatI | CATG | 3 cut(s) | 218, 431, 566 |
| FauNDI | CATATG | 1 cut(s) | 667 |
| Fnu4HI | GCNGC | 3 cut(s) | 68, 104, 709 |
| Fsp4HI | GCNGC | 3 cut(s) | 68, 104, 709 |
| FspI | TGCGCA | 1 cut(s) | 270 |
| GlaI | GCGC | 3 cut(s) | 60, 62, 270 |
| GluI | GCNGC | 3 cut(s) | 68, 104, 709 |
| HaeIII | GGCC | 1 cut(s) | 103 |
| HapII | CCGG | 1 cut(s) | 93 |
| HhaI | GCGC | 3 cut(s) | 61, 63, 271 |
| Hin1II | CATG | 3 cut(s) | 222, 435, 570 |
| Hin6I | GCGC | 3 cut(s) | 59, 61, 269 |
| HinP1I | GCGC | 3 cut(s) | 59, 61, 269 |
| HinfI | GANTC | 3 cut(s) | 5, 298, 515 |
| HpaII | CCGG | 1 cut(s) | 93 |
| Hpy166II | GTNNAC | 2 cut(s) | 90, 111 |
| Hpy188I | TCNGA | 5 cut(s) | 10, 303, 312, 482, 514 |
| Hpy188III | TCNNGA | 2 cut(s) | 209, 735 |
| Hpy8I | GTNNAC | 2 cut(s) | 90, 111 |
| HpyAV | CCTTC | 1 cut(s) | 344 |
| HpyCH4III | ACNGT | 2 cut(s) | 56, 87 |
| HpyCH4IV | ACGT | 1 cut(s) | 600 |
| HpyCH4V | TGCA | 8 cut(s) | 139, 189, 218, 261, 294, 488, 527, 632 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 67 |
| HpyF3I | CTNAG | 2 cut(s) | 657, 699 |
| HpySE526I | ACGT | 1 cut(s) | 600 |
| Hsp92II | CATG | 3 cut(s) | 222, 435, 570 |
| HspAI | GCGC | 3 cut(s) | 59, 61, 269 |
| KspI | CCGCGG | 1 cut(s) | 107 |
| Kzo9I | GATC | 3 cut(s) | 16, 205, 452 |
| LmnI | GCTCC | 1 cut(s) | 695 |
| Lsp1109I | GCAGC | 2 cut(s) | 54, 695 |
| LweI | GCATC | 2 cut(s) | 475, 514 |
| MaeII | ACGT | 1 cut(s) | 600 |
| MalI | GATC | 3 cut(s) | 18, 207, 454 |
| MboI | GATC | 3 cut(s) | 16, 205, 452 |
| MboII | GAAGA | 2 cut(s) | 59, 156 |
| MflI | RGATCY | 1 cut(s) | 452 |
| MluCI | AATT | 7 cut(s) | 33, 314, 398, 577, 612, 676, 771 |
| MlyI | GAGTC | 1 cut(s) | 14 |
| MmeI | TCCRAC | 1 cut(s) | 601 |
| MnlI | CCTC | 6 cut(s) | 4, 157, 160, 222, 520, 722 |
| Mph1103I | ATGCAT | 1 cut(s) | 490 |
| MseI | TTAA | 1 cut(s) | 342 |
| MslI | CAYNNNNRTG | 1 cut(s) | 462 |
| MspA1I | CMGCKG | 2 cut(s) | 67, 106 |
| MspI | CCGG | 1 cut(s) | 93 |
| Mva1269I | GAATGC | 2 cut(s) | 191, 263 |
| MvnI | CGCG | 2 cut(s) | 61, 106 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 67 |
| NdeI | CATATG | 1 cut(s) | 667 |
| NdeII | GATC | 3 cut(s) | 16, 205, 452 |
| NlaIII | CATG | 3 cut(s) | 222, 435, 570 |
| NsbI | TGCGCA | 1 cut(s) | 270 |
| NsiI | ATGCAT | 1 cut(s) | 490 |
| NspI | RCATGY | 1 cut(s) | 222 |
| PauI | GCGCGC | 1 cut(s) | 59 |
| PctI | GAATGC | 2 cut(s) | 191, 263 |
| PfeI | GAWTC | 2 cut(s) | 298, 515 |
| PkrI | GCNGC | 3 cut(s) | 69, 105, 710 |
| PleI | GAGTC | 1 cut(s) | 13 |
| PpsI | GAGTC | 1 cut(s) | 13 |
| PsiI | TTATAA | 1 cut(s) | 557 |
| PspPI | GGNCC | 1 cut(s) | 101 |
| PsuI | RGATCY | 1 cut(s) | 452 |
| PteI | GCGCGC | 1 cut(s) | 59 |
| PvuII | CAGCTG | 1 cut(s) | 67 |
| RsaI | GTAC | 4 cut(s) | 91, 110, 243, 413 |
| RsaNI | GTAC | 4 cut(s) | 90, 109, 242, 412 |
| RseI | CAYNNNNRTG | 1 cut(s) | 462 |
| SacII | CCGCGG | 1 cut(s) | 107 |
| SaqAI | TTAA | 1 cut(s) | 342 |
| SatI | GCNGC | 3 cut(s) | 68, 104, 709 |
| Sau3AI | GATC | 3 cut(s) | 16, 205, 452 |
| Sau96I | GGNCC | 1 cut(s) | 101 |
| ScaI | AGTACT | 1 cut(s) | 413 |
| SchI | GAGTC | 1 cut(s) | 14 |
| SfaNI | GCATC | 2 cut(s) | 475, 514 |
| Sfr303I | CCGCGG | 1 cut(s) | 107 |
| SgrBI | CCGCGG | 1 cut(s) | 107 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 462 |
| SmlI | CTYRAG | 1 cut(s) | 471 |
| SmoI | CTYRAG | 1 cut(s) | 471 |
| Sse9I | AATT | 7 cut(s) | 33, 314, 398, 577, 612, 676, 771 |
| SsiI | CCGC | 2 cut(s) | 104, 106 |
| SspI | AATATT | 1 cut(s) | 627 |
| TaaI | ACNGT | 2 cut(s) | 56, 87 |
| TaiI | ACGT | 1 cut(s) | 603 |
| TasI | AATT | 7 cut(s) | 33, 314, 398, 577, 612, 676, 771 |
| TatI | WGTACW | 2 cut(s) | 241, 411 |
| TauI | GCSGC | 1 cut(s) | 106 |
| TfiI | GAWTC | 2 cut(s) | 298, 515 |
| Tru1I | TTAA | 1 cut(s) | 342 |
| Tru9I | TTAA | 1 cut(s) | 342 |
| TscAI | CASTG | 3 cut(s) | 34, 59, 92 |
| TseI | GCWGC | 2 cut(s) | 67, 708 |
| TspDTI | ATGAA | 3 cut(s) | 213, 480, 555 |
| TspGWI | ACGGA | 3 cut(s) | 95, 176, 269 |
| TspRI | CASTG | 3 cut(s) | 34, 59, 92 |
| XceI | RCATGY | 1 cut(s) | 222 |
| ZrmI | AGTACT | 1 cut(s) | 413 |
| Zsp2I | ATGCAT | 1 cut(s) | 490 |