Rorug07G0094300

protein FAR1-RELATED SEQUENCE

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
7404692 .. 7411519
6828 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0094300.1

Sequence Viewer

Length: 2817 bp
ATGGCAAAACAGGAGCAAAAGCAGGAGCAGCCTGCAATCATCAACCCTCTGCAGGTCCAGGAAGACGGGGATCTGGACCCTGGATCTGACGACCTCGAGGCTCCTCTGCCTCTCACCGTCACTTCCCGGGTCTTGTATATGTTGGGTGACATTGCGTCTGGACCGGCCTTCAAAATCACTCAATGGCTGGAATTGGTCCGTAAACGCAGTGCCAAATACCATTCCTCTGGCTTCCCTCGCCGCCCATTAAGGCTTGACACAATGCCTGCTAGTGCAGGAGAGTCTAGTGAGGACTGGAAAGGTCCTGCGTCGCCTGAGCAAACCACAGAAGTCAATCTCTGGGAAAGACTTGGTAAAGCTGCTACATTGGACATTGAGTCGAGTTTTTTCTCATGGGATAGGCTTTCTTCACTTCACCACACTGAACATAGTAGTAGCAATGATCAGTCTGAGGATGAAATGAACAAAGCGCTGGAGGTCACCGTGAATTCGGGGGGAGTTGTTTTCTTTGCCCTTTTCAACCAGCCAGGGACTGATGATAACTCTTCTAAGGAAGCAGCGGCTGTTATAAAGATATCCTCATCGAGGATGGCCACACAGTCTGAACGTCTAGGTTACGAATTTGCAAAGTGGCTTGGAGTTCGAACTCCACAGGCCAGAGTCATACATAATTGTAGTATGGAGTGGCTCCAGATGAAGGAAGCAGCAGAAAAAGCAAGGGAAGCAGCAGCTTCAGAAGGAGATGAATGTGGGGAAATGACATGTTCGGAACTTTTGGAAGCTCTTGAACTTAGCCGATGCCTTTTGCTCATGAGCTATGTTCACGGATCTCCTTTACTTGAAAGCTCAAGTGTATTTGAGGTGAAGGAAACTGCAGAGAAAACAGCAGCTTCTCTTGGTAGGATCTTGATGTTGGACCTTGTCATCAGAAATGAAGATAGACTACCTTGCCGTCAGCTCAGATGGCGTGGAAACTCGGCAAATCTATTGTTTGCAGACAAAATGGATTTTGGAAATATGGACAGATTGGAGGAAGCATTTGATTCTGCCATCAAGAGATACAAACCAAGAGTGATCAGAGCTCTTCAAAAGGATAGAAGGGCAACTTCTGTAGATATCAGATTGCATAATACAGCATTGGTACCACAGAAATCTGATCTTTCTGACATTATGGATTCGCCAAGGTCTAGTCAGATGAGTGTAAAGAGTCAACTCTCAGATGATTTAATGTTTTCGGATTTTCCAGTTGTGGCTATTGATTCTGGCGTTCCTCGTCGACCTCCTGCTGGAAAACGTGCAAATGACCAGGAAATCTATCCAAAGTTGGTTGAGTTACTACTGAACAATTCTGAATACTCCTCTAATCTGTTACATGACATAACATTAGGGAAATTAGGACGTCCTCTGTTACAAGATACTGATGCATCTGATACACAAGCAATGGAAATGACTTCGGTTGTTCAAGGGTTCCGTAGTGGGTTCAAATGTGCTCTCAGGGATCTGCAGGGATTCCATATCTTCTTACTCACACTTCATCAAAAACTGGAGAATTTGATACGTATATTTTTCAATATTATAGATAAAATAGGGGAGTCTGATAAAGAGGATTTGGTAGTTACTGAGTCTCCATCACAAGCTGCCGGAAGTGGTTATCTTCCTTCTACACCAAGTAAGGAGAGGCTTGTCAATGAGAACCATTCAGATTTTAGTGATTCCGAATTGCAGAGAACTGCTCCAAGGCCTTCAACTTCAGGACTTAAAGAAAGCTGTGACTGCAGCTCTCCTATGTCACGGGAGAGTTGGCACGGAAAGTTTTGGAAAGGGAGTGCAAGTTCAGATCCCCTCCGTAGTCTGCGTTTGACAGCAAAGCTCCGGGACTTTCATAAAAATGCCAAGGTCGATGCTGAAACGAACAAAGAATTGGAACAGTGGAATGAAATGCTAAAGAGCGATGCAGTCAAACTTTGCCAGGAGAACAATTTTAATGCTGGGTTCTTTGAGGGTAGTGACAATAACGGCGTAGTTGACGCTTATGAATTGAAGGTCAGACTTGAGCACATTCTCGAGAGAATTTCATTGATATCTGAGGCTGCAAATACAGAGAGGCCATCTCGAATCACAAGTAGCCTGTTTATTGGTGGAGCGCTTGCTGCACGATCTGTATACACACTGCAACGCTTAGGAATCACTCATATATTATGTTTGTGTTCCAATGAAATTGGACAGTCAGATTCTCAGTTTCCTGATCTATTTGAGTACAAAAACTTCTCTATATGTGACAGTGAAGATTTCAACATCAGCAACATCTTTGATGAAGCTGTTGAGTTTATTGATCGTGTTGAAGAAACAGGAGGGAAGGTTCTAGTCCATTGCTTTGAGGGAAAAAGTAGAAGTGCTACACTAGTGCTTGCATACCTAATGCTCAGAAAGAATTCCACTCTATTAGAAGCATGGAATTCTCTAAAGCAGGTTCATCGCCGAGCACAACCCAACGATGGGTTTGCGAAGATCTTGTTGAATTTGGATAAGAAACTGCATGGTAAAGTTTCAATGGAGTGGCATCAGCGGAAGCCAATGATGAAAGTTTGCCCCATCTGTGGGGTGAATGCGGGTCTGAGTAGCAGCTCTCTTAAGCTTCATTTACAGAAATCACATAAGAAACTATCGTCTGGTAGCGTGGATAGCGCAATGACAATGGAAATACAAAAGGCTTTGACAGTACTAAAAATCAGTCGAGGTGGAAGTGTCAGCCCCACACAAAGATCTCATTCAGATGTTGAAGACCGGACGGCCAGATGCCGAGCCACGACGCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

938

Amino Acids

104.66

Weight (kDa)

5.91

Isoelectric Point (pI)

51.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Act-Frag_cataly PF09192 110 - 423 3.3e-47 Actin-fragmin kinase, catalytic
DSPc PF00782 712 - 842 1.3e-24 Dual specificity phosphatase, catalytic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000143)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G76710 AT1G76710 AT1G76710 AT1G76710
fragaria_vesca FvH4_1g20063 FvH4_2g15231 FvH4_3g04011 FvH4_3g28681 FvH4_4g01411 FvH4_4g10181 FvH4_4g15922 FvH4_4g16651 FvH4_4g16652 FvH4_5g13892 FvH4_5g13893 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g25511 FvH4_6g12551 FvH4_6g12552 FvH4_6g38841 FvH4_7g04391
malus_domestica MD05G1031300.v1.1 MD05G1031400.v1.1 MD05G1031500.v1.1 MD08G1164400.v1.1 MD10G1032900.v1.1 MD10G1033000.v1.1 MD10G1033100.v1.1
prunus_persica Prupe.3G240700_v2.0.a1 Prupe.7G144600_v2.0.a1 Prupe.8G038500_v2.0.a1 Prupe.8G038500_v2.0.a1
pyrus_communis pycom05g02250 pycom05g02260 pycom05g02270 pycom05g02280 pycom08g14160 pycom10g02100 pycom10g02110 pycom10g02130
rosa_chinensis RchiOBHm_Chr1g0329481 RchiOBHm_Chr1g0329491 RchiOBHm_Chr1g0341531 RchiOBHm_Chr3g0464811 RchiOBHm_Chr3g0494701 RchiOBHm_Chr3g0497501 RchiOBHm_Chr4g0385841 RchiOBHm_Chr5g0061181 RchiOBHm_Chr6g0263001 RchiOBHm_Chr7g0193111 RchiOBHm_Chr7g0206281 RchiOBHm_Chr7g0206311
rosa_laevigata RLG00000018908 RLG00000028528 RLG00000028803 RLG00000029882 RLG00000029883 RLG00000030361
rosa_multiflora Rmu_co8196328.1_g000001 Rmu_co8259135.1_g000001 Rmu_co8269185.1_g000001 Rmu_sc0000076.1_g000019 Rmu_sc0000311.1_g000007 Rmu_sc0000429.1_g000038 Rmu_sc0000429.1_g000039 Rmu_sc0000429.1_g000040 Rmu_sc0000511.1_g000005 Rmu_sc0000539.1_g000054 Rmu_sc0000566.1_g000039 Rmu_sc0000805.1_g000032 Rmu_sc0000870.1_g000073 Rmu_sc0000870.1_g000074 Rmu_sc0001010.1_g000018 Rmu_sc0001083.1_g000013 Rmu_sc0001114.1_g000011 Rmu_sc0001702.1_g000027 Rmu_sc0001779.1_g000012 Rmu_sc0002923.1_g000036 Rmu_sc0003242.1_g000011 Rmu_sc0003291.1_g000036 Rmu_sc0003393.1_g000012 Rmu_sc0003872.1_g000016 Rmu_sc0003872.1_g000017 Rmu_sc0003872.1_g000018 Rmu_sc0004084.1_g000020 Rmu_sc0004386.1_g000005 Rmu_sc0004622.1_g000005 Rmu_sc0004742.1_g000021 Rmu_sc0004755.1_g000020 Rmu_sc0004805.1_g000036 Rmu_sc0005065.1_g000006 Rmu_sc0005177.1_g000004 Rmu_sc0006373.1_g000003 Rmu_sc0006373.1_g000004 Rmu_sc0007121.1_g000002 Rmu_sc0007943.1_g000003 Rmu_sc0010368.1_g000006 Rmu_sc0010543.1_g000001 Rmu_sc0012591.1_g000006 Rmu_sc0013504.1_g000009 Rmu_sc0015025.1_g000001 Rmu_sc0016170.1_g000001 Rmu_sc0017156.1_g000001 Rmu_sc0026439.1_g000001
rosa_roxburghii Rroxscaffold_175G00432280 Rroxscaffold_1G00030190 Rroxscaffold_1G00030880 Rroxscaffold_2G00090520 Rroxscaffold_3G00227940 Rroxscaffold_3G00233400 Rroxscaffold_3G00238500 Rroxscaffold_3G00251650 Rroxscaffold_4G00301570 Rroxscaffold_4G00321040 Rroxscaffold_5G00350880 Rroxscaffold_7G00184400
rosa_rugosa Rorug01G0080800 Rorug01G0080900 Rorug01G0193900 Rorug02G0275900 Rorug02G0275900 Rorug02G0275900 Rorug02G0305400 Rorug02G0311800 Rorug02G0350400 Rorug02G0381300 Rorug03G0136700 Rorug03G0181900 Rorug03G0268000 Rorug04G0301600 Rorug05G0175100 Rorug05G0250700 Rorug05G0298200 Rorug05G0596000 Rorug06G0029500 Rorug07G0094300 Rorug07G0094300 Rorug07G0095400 Rorug07G0140100
rosa_samantha Rh1AG099200 Rh1AG190500 Rh1BG078900 Rh1BG079000 Rh1BG079100 Rh1CG084600 Rh1CG084700 Rh1CG095300 Rh1CG175900 Rh1DG103300 Rh1DG150400 Rh2AG079300 Rh2AG272400 Rh2AG464800 Rh2AG507400 Rh2DG078300 Rh2DG078400 Rh3CG206900 Rh3CG295400 Rh3DG206800 Rh3DG356200 Rh4CG071500 Rh4CG179200 Rh4DG064700 Rh5CG362400 Rh7AG212300 Rh7AG226200 Rh7BG222200
rosa_wichuraiana Rw0G009990 Rw0G011260 Rw0G011270 Rw0G012910 Rw0G013740 Rw1G007740 Rw1G013050 Rw1G014230 Rw2G014270 Rw3G012720 Rw3G028110 Rw4G006630 Rw4G015270 Rw4G016160 Rw4G031380 Rw5G011440 Rw5G029180 Rw5G048360 Rw5G048430 Rw5G048780 Rw6G005250 Rw6G006390 Rw7G002840 Rw7G014080 Rw7G019650 Rw7G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 569
AatII GACGTC 1 cut(s) 1402
AbsI CCTCGAGG 1 cut(s) 95
Acc36I ACCTGC 2 cut(s) 43, 2458
Acc65I GGTACC 1 cut(s) 1141
AccB1I GGYRCC 1 cut(s) 1141
AccI GTMKAC 2 cut(s) 1276, 2163
AciI CCGC 4 cut(s) 241, 560, 2566, 2609
AclWI GGATC 6 cut(s) 78, 91, 835, 911, 1506, 1832
AcoI YGGCCR 2 cut(s) 591, 2790
AcsI RAATTY 7 cut(s) 487, 620, 1549, 2070, 2431, 2455, 2518
AcuI CTGAAG 2 cut(s) 717, 1734
AcyI GRCGYC 2 cut(s) 1399, 2810
AfaI GTAC 3 cut(s) 1143, 2258, 2721
AfeI AGCGCT 2 cut(s) 471, 2145
AfiI CCNNNNNNNGG 8 cut(s) 52, 585, 697, 1286, 2495, 2496, 2597, 2598
AflII CTTAAG 1 cut(s) 2630
AflIII ACRYGT 1 cut(s) 761
AhdI GACNNNNNGTC 2 cut(s) 154, 376
AhlI ACTAGT 1 cut(s) 2401
AjnI CCWGG 5 cut(s) 57, 79, 526, 1305, 1968
AjuI GAANNNNNNNTTGG 2 cut(s) 1904, 1936
AloI GAACNNNNNNTCC 4 cut(s) 1816, 1848, 2343, 2375
Alw21I GWGCWC 4 cut(s) 1084, 1492, 2058, 2485
Alw26I GTCTC 1 cut(s) 1629
AlwI GGATC 6 cut(s) 78, 91, 835, 911, 1506, 1832
AlwNI CAGNNNCTG 2 cut(s) 533, 563
Ama87I CYCGRG 3 cut(s) 95, 126, 2063
Aor51HI AGCGCT 2 cut(s) 471, 2145
AoxI GGCC 6 cut(s) 165, 591, 654, 1739, 2105, 2790
ApoI RAATTY 7 cut(s) 487, 620, 1549, 2070, 2431, 2455, 2518
Asp700I GAANNNNTTC 1 cut(s) 2431
Asp718I GGTACC 1 cut(s) 1141
AspLEI GCGC 3 cut(s) 472, 2146, 2687
AspS9I GGNCC 6 cut(s) 55, 76, 161, 196, 302, 916
AsuC2I CCSGG 3 cut(s) 127, 128, 1874
AsuHPI GGTGA 6 cut(s) 106, 158, 407, 472, 874, 2614
AsuII TTCGAA 1 cut(s) 643
AvaI CYCGRG 3 cut(s) 95, 126, 2063
AvaII GGWCC 6 cut(s) 55, 76, 161, 196, 302, 916
BalI TGGCCA 1 cut(s) 593
BanI GGYRCC 1 cut(s) 1141
BanII GRGCYC 1 cut(s) 1084
BarI GAAGNNNNNNTAC 4 cut(s) 927, 959, 2249, 2281
BbsI GAAGAC 2 cut(s) 69, 2787
Bbv12I GWGCWC 4 cut(s) 1084, 1492, 2058, 2485
BccI CCATC 7 cut(s) 583, 957, 1058, 1636, 2116, 2489, 2600
BceAI ACGGC 3 cut(s) 936, 2032, 2805
BcgI CGANNNNNNTGC 4 cut(s) 2456, 2483, 2490, 2517
BciT130I CCWGG 5 cut(s) 59, 81, 528, 1307, 1970
BclI TGATCA 2 cut(s) 442, 1074
BcnI CCSGG 3 cut(s) 127, 128, 1874
BcoDI GTCTC 1 cut(s) 1629
BcuI ACTAGT 1 cut(s) 2401
BfaI CTAG 6 cut(s) 270, 285, 611, 1188, 2363, 2402
BfmI CTRYAG 5 cut(s) 50, 873, 1110, 1502, 1774
BfoI RGCGCY 2 cut(s) 473, 2147
BfrI CTTAAG 1 cut(s) 2630
BfuAI ACCTGC 2 cut(s) 43, 2458
BglII AGATCT 2 cut(s) 2508, 2762
BmcAI AGTACT 1 cut(s) 2721
Bme1390I CCNGG 8 cut(s) 59, 81, 127, 128, 528, 1307, 1874, 1970
Bme18I GGWCC 6 cut(s) 55, 76, 161, 196, 302, 916
BmeRI GACNNNNNGTC 2 cut(s) 154, 376
BmeT110I CYCGRG 3 cut(s) 95, 126, 2063
BmgT120I GGNCC 6 cut(s) 55, 76, 161, 196, 302, 916
BmiI GGNNCC 5 cut(s) 78, 102, 689, 1143, 1469
BmrFI CCNGG 8 cut(s) 59, 81, 127, 128, 528, 1307, 1874, 1970
BmsI GCATC 7 cut(s) 788, 1411, 1433, 1891, 1942, 2569, 2786
BpiI GAAGAC 2 cut(s) 69, 2787
BplI GAGNNNNNCTC 4 cut(s) 1717, 1749, 2095, 2127
BpmI CTGGAG 3 cut(s) 494, 674, 1565
Bpu10I CCTNAGC 2 cut(s) 315, 2179
Bpu14I TTCGAA 1 cut(s) 643
BpuEI CTTGAG 2 cut(s) 832, 2072
BpuMI CCSGG 3 cut(s) 127, 128, 1874
BsaAI YACGTR 1 cut(s) 1559
BsaHI GRCGYC 2 cut(s) 1399, 2810
BsaJI CCNNGG 6 cut(s) 79, 126, 527, 1181, 1736, 1893
BsaWI WCCGGW 1 cut(s) 2784
BsaXI ACNNNNNCTCC 6 cut(s) 1609, 1639, 1816, 1846, 2343, 2373
Bsc4I CCNNNNNNNGG 8 cut(s) 52, 585, 697, 1286, 2495, 2496, 2597, 2598
Bse118I RCCGGY 1 cut(s) 163
Bse1I ACTGG 3 cut(s) 299, 1244, 1548
Bse3DI GCAATG 5 cut(s) 150, 445, 1446, 2368, 2694
BseBI CCWGG 5 cut(s) 59, 81, 528, 1307, 1970
BseDI CCNNGG 6 cut(s) 79, 126, 527, 1181, 1736, 1893
BseGI GGATG 2 cut(s) 460, 594
BseLI CCNNNNNNNGG 8 cut(s) 52, 585, 697, 1286, 2495, 2496, 2597, 2598
BseMI GCAATG 5 cut(s) 150, 445, 1446, 2368, 2694
BseNI ACTGG 3 cut(s) 299, 1244, 1548
BseRI GAGGAG 2 cut(s) 93, 1348
BseYI CCCAGC 1 cut(s) 1988
BsgI GTGCAG 2 cut(s) 294, 2136
BshFI GGCC 6 cut(s) 167, 593, 656, 1741, 2107, 2792
BshNI GGYRCC 1 cut(s) 1141
BsiHKAI GWGCWC 4 cut(s) 1084, 1492, 2058, 2485
BsiHKCI CYCGRG 3 cut(s) 95, 126, 2063
BsiSI CCGG 5 cut(s) 127, 164, 1641, 1873, 2785
BslFI GGGAC 2 cut(s) 544, 1889
BslI CCNNNNNNNGG 8 cut(s) 52, 585, 697, 1286, 2495, 2496, 2597, 2598
BsmAI GTCTC 1 cut(s) 1629
BsmFI GGGAC 2 cut(s) 544, 1889
BsmI GAATGC 1 cut(s) 2611
BsnI GGCC 6 cut(s) 167, 593, 656, 1741, 2107, 2792
BsoBI CYCGRG 3 cut(s) 95, 126, 2063
Bsp119I TTCGAA 1 cut(s) 643
Bsp1286I GDGCHC 4 cut(s) 1084, 1492, 2058, 2485
BspACI CCGC 4 cut(s) 241, 560, 2566, 2609
BspANI GGCC 6 cut(s) 167, 593, 656, 1741, 2107, 2792
BspHI TCATGA 1 cut(s) 810
BspLI GGNNCC 5 cut(s) 78, 102, 689, 1143, 1469
BspMAI CTGCAG 4 cut(s) 54, 877, 1506, 1778
BspMI ACCTGC 2 cut(s) 43, 2458
BspPI GGATC 6 cut(s) 78, 91, 835, 911, 1506, 1832
BspQI GCTCTTC 1 cut(s) 1089
BspT104I TTCGAA 1 cut(s) 643
BspT107I GGYRCC 1 cut(s) 1141
BspTI CTTAAG 1 cut(s) 2630
BsrDI GCAATG 5 cut(s) 150, 445, 1446, 2368, 2694
BsrFI RCCGGY 1 cut(s) 163
BsrI ACTGG 3 cut(s) 299, 1244, 1548
BssAI RCCGGY 1 cut(s) 163
BssECI CCNNGG 6 cut(s) 79, 126, 527, 1181, 1736, 1893
BssNAI GTATAC 1 cut(s) 2164
BssNI GRCGYC 2 cut(s) 1399, 2810
BssT1I CCWWGG 3 cut(s) 1181, 1736, 1893
Bst1107I GTATAC 1 cut(s) 2164
Bst2UI CCWGG 5 cut(s) 59, 81, 528, 1307, 1970
Bst4CI ACNGT 7 cut(s) 118, 484, 600, 1929, 2226, 2282, 2719
Bst6I CTCTTC 2 cut(s) 550, 1089
BstACI GRCGYC 2 cut(s) 1399, 2810
BstAFI CTTAAG 1 cut(s) 2630
BstBAI YACGTR 1 cut(s) 1559
BstBI TTCGAA 1 cut(s) 643
BstC8I GCNNGC 4 cut(s) 33, 267, 2148, 2409
BstEII GGTNACC 1 cut(s) 478
BstENI CCTNNNNNAGG 1 cut(s) 583
BstF5I GGATG 2 cut(s) 460, 594
BstH2I RGCGCY 2 cut(s) 473, 2147
BstHHI GCGC 3 cut(s) 472, 2146, 2687
BstMAI GTCTC 1 cut(s) 1629
BstMWI GCNNNNNNNGC 8 cut(s) 28, 237, 713, 722, 964, 1773, 2150, 2682
BstNI CCWGG 5 cut(s) 59, 81, 528, 1307, 1970
BstNSI RCATGY 1 cut(s) 765
BstPI GGTNACC 1 cut(s) 478
BstSCI CCNGG 8 cut(s) 57, 79, 125, 126, 526, 1305, 1872, 1968
BstSFI CTRYAG 5 cut(s) 50, 873, 1110, 1502, 1774
BstSNI TACGTA 1 cut(s) 1559
BstV2I GAAGAC 2 cut(s) 69, 2787
BstX2I RGATCY 8 cut(s) 70, 83, 827, 903, 1498, 1837, 2508, 2762
BstXI CCANNNNNNTGG 1 cut(s) 227
BstYI RGATCY 8 cut(s) 70, 83, 827, 903, 1498, 1837, 2508, 2762
BstZ17I GTATAC 1 cut(s) 2164
BsuRI GGCC 6 cut(s) 167, 593, 656, 1741, 2107, 2792
BtgZI GCGATG 2 cut(s) 1965, 2459
BtsCI GGATG 2 cut(s) 460, 594
BtsI GCAGTG 2 cut(s) 214, 2168
BtsIMutI CAGTG 5 cut(s) 214, 420, 1934, 2168, 2287
BveI ACCTGC 2 cut(s) 43, 2458
Cac8I GCNNGC 4 cut(s) 33, 267, 2148, 2409
CaiI CAGNNNCTG 2 cut(s) 533, 563
CciI TCATGA 1 cut(s) 810
CfoI GCGC 3 cut(s) 472, 2146, 2687
Cfr10I RCCGGY 1 cut(s) 163
Cfr13I GGNCC 6 cut(s) 55, 76, 161, 196, 302, 916
Cfr9I CCCGGG 1 cut(s) 126
CseI GACGC 3 cut(s) 144, 297, 2036
Csp6I GTAC 3 cut(s) 1142, 2257, 2720
CviAII CATG 6 cut(s) 393, 762, 811, 1373, 2451, 2537
CviQI GTAC 3 cut(s) 1142, 2257, 2720
DriI GACNNNNNGTC 2 cut(s) 154, 376
EaeI YGGCCR 2 cut(s) 591, 2790
Eam1104I CTCTTC 2 cut(s) 550, 1089
Eam1105I GACNNNNNGTC 2 cut(s) 154, 376
EarI CTCTTC 2 cut(s) 550, 1089
Ecl136II GAGCTC 1 cut(s) 1082
Eco105I TACGTA 1 cut(s) 1559
Eco130I CCWWGG 3 cut(s) 1181, 1736, 1893
Eco147I AGGCCT 1 cut(s) 1741
Eco24I GRGCYC 1 cut(s) 1084
Eco32I GATATC 3 cut(s) 576, 1117, 2082
Eco47I GGWCC 6 cut(s) 55, 76, 161, 196, 302, 916
Eco47III AGCGCT 2 cut(s) 471, 2145
Eco53kI GAGCTC 1 cut(s) 1082
Eco57I CTGAAG 2 cut(s) 717, 1734
Eco88I CYCGRG 3 cut(s) 95, 126, 2063
Eco91I GGTNACC 1 cut(s) 478
EcoICRI GAGCTC 1 cut(s) 1082
EcoNI CCTNNNNNAGG 1 cut(s) 583
EcoO109I RGGNCCY 1 cut(s) 302
EcoO65I GGTNACC 1 cut(s) 478
EcoRI GAATTC 3 cut(s) 487, 2431, 2455
EcoRII CCWGG 5 cut(s) 57, 79, 526, 1305, 1968
EcoRV GATATC 3 cut(s) 576, 1117, 2082
EcoT14I CCWWGG 3 cut(s) 1181, 1736, 1893
EcoT22I ATGCAT 1 cut(s) 1426
EcoT38I GRGCYC 1 cut(s) 1084
ErhI CCWWGG 3 cut(s) 1181, 1736, 1893
FaeI CATG 6 cut(s) 396, 765, 814, 1376, 2454, 2540
FalI AAGNNNNNCTT 2 cut(s) 1090, 1122
FaqI GGGAC 2 cut(s) 544, 1889
FatI CATG 6 cut(s) 392, 761, 810, 1372, 2450, 2536
FauI CCCGC 1 cut(s) 2602
FbaI TGATCA 2 cut(s) 442, 1074
FblI GTMKAC 2 cut(s) 1276, 2163
FokI GGATG 2 cut(s) 467, 601
FriOI GRGCYC 1 cut(s) 1084
FspBI CTAG 6 cut(s) 270, 285, 611, 1188, 2363, 2402
GlaI GCGC 3 cut(s) 471, 2145, 2686
GsaI CCCAGC 1 cut(s) 1992
GsuI CTGGAG 3 cut(s) 494, 674, 1565
HaeII RGCGCY 2 cut(s) 473, 2147
HaeIII GGCC 6 cut(s) 167, 593, 656, 1741, 2107, 2792
HapII CCGG 5 cut(s) 127, 164, 1641, 1873, 2785
HgaI GACGC 3 cut(s) 144, 297, 2036
HhaI GCGC 3 cut(s) 472, 2146, 2687
Hin1I GRCGYC 2 cut(s) 1399, 2810
Hin1II CATG 6 cut(s) 396, 765, 814, 1376, 2454, 2540
Hin6I GCGC 3 cut(s) 470, 2144, 2685
HinP1I GCGC 3 cut(s) 470, 2144, 2685
HincII GTYRAC 3 cut(s) 1211, 1277, 2026
HindII GTYRAC 3 cut(s) 1211, 1277, 2026
HindIII AAGCTT 1 cut(s) 2633
HpaII CCGG 5 cut(s) 127, 164, 1641, 1873, 2785
HphI GGTGA 6 cut(s) 106, 158, 407, 472, 874, 2614
Hpy166II GTNNAC 6 cut(s) 203, 823, 1211, 1277, 2026, 2164
Hpy8I GTNNAC 6 cut(s) 203, 823, 1211, 1277, 2026, 2164
Hpy99I CGWCG 3 cut(s) 313, 1278, 2812
HpyAV CCTTC 9 cut(s) 178, 691, 731, 859, 1092, 1668, 1752, 2035, 2350
HpyCH4III ACNGT 7 cut(s) 118, 484, 600, 1929, 2226, 2282, 2719
HpyCH4IV ACGT 4 cut(s) 607, 1294, 1399, 1558
HpyF10VI GCNNNNNNNGC 8 cut(s) 28, 237, 713, 722, 964, 1773, 2150, 2682
HpySE526I ACGT 4 cut(s) 607, 1294, 1399, 1558
Hsp92I GRCGYC 2 cut(s) 1399, 2810
Hsp92II CATG 6 cut(s) 396, 765, 814, 1376, 2454, 2540
HspAI GCGC 3 cut(s) 470, 2144, 2685
KpnI GGTACC 1 cut(s) 1145
Ksp22I TGATCA 2 cut(s) 442, 1074
LguI GCTCTTC 1 cut(s) 1089
LmnI GCTCC 7 cut(s) 13, 25, 106, 693, 1738, 1875, 2141
LweI GCATC 7 cut(s) 788, 1411, 1433, 1891, 1942, 2569, 2786
MaeI CTAG 6 cut(s) 270, 285, 611, 1188, 2363, 2402
MaeII ACGT 4 cut(s) 607, 1294, 1399, 1558
MflI RGATCY 8 cut(s) 70, 83, 827, 903, 1498, 1837, 2508, 2762
MhlI GDGCHC 4 cut(s) 1084, 1492, 2058, 2485
MlsI TGGCCA 1 cut(s) 593
MluNI TGGCCA 1 cut(s) 593
MlyI GAGTC 6 cut(s) 290, 386, 669, 1216, 1601, 1631
MmeI TCCRAC 1 cut(s) 894
Mox20I TGGCCA 1 cut(s) 593
Mph1103I ATGCAT 1 cut(s) 1426
MroXI GAANNNNTTC 1 cut(s) 2431
MscI TGGCCA 1 cut(s) 593
MseI TTAA 5 cut(s) 248, 1226, 1758, 1983, 2631
MslI CAYNNNNRTG 2 cut(s) 1887, 2772
Msp20I TGGCCA 1 cut(s) 593
MspA1I CMGCKG 2 cut(s) 560, 2566
MspCI CTTAAG 1 cut(s) 2630
MspI CCGG 5 cut(s) 127, 164, 1641, 1873, 2785
MspR9I CCNGG 8 cut(s) 59, 81, 127, 128, 528, 1307, 1874, 1970
Mva1269I GAATGC 1 cut(s) 2611
MvaI CCWGG 5 cut(s) 59, 81, 528, 1307, 1970
MwoI GCNNNNNNNGC 8 cut(s) 28, 237, 713, 722, 964, 1773, 2150, 2682
NciI CCSGG 3 cut(s) 127, 128, 1874
NlaIII CATG 6 cut(s) 396, 765, 814, 1376, 2454, 2540
NlaIV GGNNCC 5 cut(s) 78, 102, 689, 1143, 1469
NmeAIII GCCGAG 2 cut(s) 956, 2504
NmuCI GTSAC 7 cut(s) 118, 146, 478, 1769, 1788, 2006, 2276
NsiI ATGCAT 1 cut(s) 1426
NspI RCATGY 1 cut(s) 765
NspV TTCGAA 1 cut(s) 643
PaeR7I CTCGAG 2 cut(s) 95, 2063
PagI TCATGA 1 cut(s) 810
PceI AGGCCT 1 cut(s) 1741
PciI ACATGT 1 cut(s) 761
PciSI GCTCTTC 1 cut(s) 1089
PctI GAATGC 1 cut(s) 2611
PdmI GAANNNNTTC 1 cut(s) 2431
PfeI GAWTC 8 cut(s) 1043, 1175, 1259, 1509, 1712, 2115, 2184, 2231
PflFI GACNNNGTC 1 cut(s) 920
PfoI TCCNGGA 2 cut(s) 57, 1872
PleI GAGTC 6 cut(s) 289, 385, 668, 1215, 1600, 1630
PpsI GAGTC 6 cut(s) 289, 385, 668, 1215, 1600, 1630
Ppu21I YACGTR 1 cut(s) 1559
PpuMI RGGWCCY 1 cut(s) 302
PscI ACATGT 1 cut(s) 761
PsiI TTATAA 1 cut(s) 569
Psp124BI GAGCTC 1 cut(s) 1084
Psp5II RGGWCCY 1 cut(s) 302
Psp6I CCWGG 5 cut(s) 57, 79, 526, 1305, 1968
PspEI GGTNACC 1 cut(s) 478
PspFI CCCAGC 1 cut(s) 1988
PspGI CCWGG 5 cut(s) 57, 79, 526, 1305, 1968
PspN4I GGNNCC 5 cut(s) 78, 102, 689, 1143, 1469
PspPI GGNCC 6 cut(s) 55, 76, 161, 196, 302, 916
PspPPI RGGWCCY 1 cut(s) 302
PspXI VCTCGAGB 1 cut(s) 95
PstI CTGCAG 4 cut(s) 54, 877, 1506, 1778
PstNI CAGNNNCTG 2 cut(s) 533, 563
PsuI RGATCY 8 cut(s) 70, 83, 827, 903, 1498, 1837, 2508, 2762
PsyI GACNNNGTC 1 cut(s) 920
RsaI GTAC 3 cut(s) 1143, 2258, 2721
RsaNI GTAC 3 cut(s) 1142, 2257, 2720
RseI CAYNNNNRTG 2 cut(s) 1887, 2772
SacI GAGCTC 1 cut(s) 1084
SalI GTCGAC 1 cut(s) 1275
SapI GCTCTTC 1 cut(s) 1089
SaqAI TTAA 5 cut(s) 248, 1226, 1758, 1983, 2631
Sau96I GGNCC 6 cut(s) 55, 76, 161, 196, 302, 916
ScaI AGTACT 1 cut(s) 2721
SchI GAGTC 6 cut(s) 290, 386, 669, 1216, 1601, 1631
ScrFI CCNGG 8 cut(s) 59, 81, 127, 128, 528, 1307, 1874, 1970
SduI GDGCHC 4 cut(s) 1084, 1492, 2058, 2485
SfaNI GCATC 7 cut(s) 788, 1411, 1433, 1891, 1942, 2569, 2786
SfcI CTRYAG 5 cut(s) 50, 873, 1110, 1502, 1774
Sfr274I CTCGAG 2 cut(s) 95, 2063
SfuI TTCGAA 1 cut(s) 643
SinI GGWCC 6 cut(s) 55, 76, 161, 196, 302, 916
SlaI CTCGAG 2 cut(s) 95, 2063
SmaI CCCGGG 1 cut(s) 128
SmiMI CAYNNNNRTG 2 cut(s) 1887, 2772
SmlI CTYRAG 5 cut(s) 95, 847, 2051, 2063, 2630
SmoI CTYRAG 5 cut(s) 95, 847, 2051, 2063, 2630
SnaBI TACGTA 1 cut(s) 1559
SpeI ACTAGT 1 cut(s) 2401
SseBI AGGCCT 1 cut(s) 1741
SsiI CCGC 4 cut(s) 241, 560, 2566, 2609
SspI AATATT 1 cut(s) 1573
SspMI CTAG 6 cut(s) 270, 285, 611, 1188, 2363, 2402
SstI GAGCTC 1 cut(s) 1084
StuI AGGCCT 1 cut(s) 1741
StyD4I CCNGG 8 cut(s) 57, 79, 125, 126, 526, 1305, 1872, 1968
StyI CCWWGG 3 cut(s) 1181, 1736, 1893
TaaI ACNGT 7 cut(s) 118, 484, 600, 1929, 2226, 2282, 2719
TaiI ACGT 4 cut(s) 610, 1297, 1402, 1561
TaqI TCGA 9 cut(s) 96, 380, 584, 643, 1276, 1899, 2064, 2113, 2734
TatI WGTACW 2 cut(s) 2256, 2719
TauI GCSGC 2 cut(s) 243, 563
TfiI GAWTC 8 cut(s) 1043, 1175, 1259, 1509, 1712, 2115, 2184, 2231
Tru1I TTAA 5 cut(s) 248, 1226, 1758, 1983, 2631
Tru9I TTAA 5 cut(s) 248, 1226, 1758, 1983, 2631
TscAI CASTG 5 cut(s) 214, 427, 1934, 2175, 2287
TseFI GTSAC 7 cut(s) 118, 146, 478, 1769, 1788, 2006, 2276
Tsp45I GTSAC 7 cut(s) 118, 146, 478, 1769, 1788, 2006, 2276
TspGWI ACGGA 5 cut(s) 188, 840, 1460, 1821, 1835
TspMI CCCGGG 1 cut(s) 126
TspRI CASTG 5 cut(s) 214, 427, 1934, 2175, 2287
Tth111I GACNNNGTC 1 cut(s) 920
Vha464I CTTAAG 1 cut(s) 2630
VpaK11BI GGWCC 6 cut(s) 55, 76, 161, 196, 302, 916
XagI CCTNNNNNAGG 1 cut(s) 583
XapI RAATTY 7 cut(s) 487, 620, 1549, 2070, 2431, 2455, 2518
XceI RCATGY 1 cut(s) 765
XhoI CTCGAG 2 cut(s) 95, 2063
XmaI CCCGGG 1 cut(s) 126
XmiI GTMKAC 2 cut(s) 1276, 2163
XmnI GAANNNNTTC 1 cut(s) 2431
XspI CTAG 6 cut(s) 270, 285, 611, 1188, 2363, 2402
ZraI GACGTC 1 cut(s) 1400
ZrmI AGTACT 1 cut(s) 2721
Zsp2I ATGCAT 1 cut(s) 1426
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.