Rw5G048360

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000143
Physical Location & Seq
Reverse (-)
84128100 .. 84130702
2603 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G048360.1

Sequence Viewer

Length: 2022 bp
ATGTTTAACTTTGGTTTTCTCTTCTGCAATTCAATTGTTCTTACTGTTCCTTCTCTTATGCCTCATATCAAATTGCACAAGTTTCTTTCTTTATTATTTGTGGGCCCCTCTATGATTGATGTTTCTGATGCATTCCTCTCATTATCGACGAAATTTTTTGAAAATCGAGAAGACCTTCTCAGTGCTATTCGTAAGATTGGGTTGCTGCAAGGGTATGTTATGGTAATCAAAAGATCTAAAAGCAATAGATATGTGGCTATTGGTTGTGATAGAGGTGGTTGTTATCGAACCTACTCTACACTTGAGGAGAAGAAAAAGAATTCAGCTTCTCGTCTGATAGATTGCCCTTTCAAAATTCTGGGTAGAAGGACAGCCGAAGGGTTGTGGAAGGTCGAGATAAGTAGCTTGTTACATAACCATGAGCCTTCCATTGACATGGCTGGACATCCATATTGTCGTCGGTTTACGAAAGATGAAGCCTTACAAGTTGAACAAATGAGCCGGGCTGGCATAAAACCACGTCAAATTCTCTCTTCCCTTCGACAAAGTAATCCTGATCTTCTAGCTGTTTCCAGAAATATATATAGCAAGACAGCTCAATTTAGGAGGGAGAGTCTAGGTGGGCGTTCAATTATTCAAGCATTATTAGATGAGCTTGGTGGTGCTGGTTTTTCTCATAATGTCAAATATGATCACTCTGGTCATTTGACTCATCTATTCTTTGCTCATCCCACGTCCATTGAGTTGACTAAAAGCTACTCTAATGTCTTTGTGATGGATTGTACTTATAAGACAAATAAGTACAAGATGCCATTACTTGAGATTGTAGGAGTGTCGAGCTTCAACATCATTCTATTCGTGTTTTGTTTTCATGCAAAAGAGGAACAACACGATTATCAGTGGGCTCTTGAAATGTTCAGTAAGTTGTTGGGAGATGGTAATCATCCATTGGCGATTGTAAGTGATAGGGAGTTGGCATTAATGAAAGCAGTACAAGTTGTGTTTCCGATGACTCCTAATCTTTTATGCATATGGCATATTGAAAAAAATATTCTTGCACATTGTAAGGGTCAGTTTAAGGAAGATGCAGATTGGGTTGGTTTTATGTCTTCTTGGAGTACCCTTGTAAAGTCTTGGGACGTGTCGACATTTAATGAAGCTTGGAACCGTTTTCAAATTGAGTACAAAGACTATTCTTCCATTTTGACTTACATTGACAATACTTGGCTTCCATGGAAAGAGAGGTTTGTATTTGCATGGACCGGGCAAACTTCACACTTTGGTAATAATGTTACTTCTAGAGCAGAAGGTGCACATGGAACCTTAAAGAAATATCTTCAAGTTTCTACTGGTGGTCTCCGTGAAGTGAAGGAAAATATTTGTCTTGCTATTCAAAATCAGTTTCAAGAAATTAGAACTCAACTTGCAAGTGAAAAGATTCGTGTTCCTCAAAAGCTTTGCATCCCTTTCTTTAAAGAAGTGATTAATAAGGTGTCTTTCTATGCTTTGTTTGAGTTACAAAAGCAATATTTGTTGGCAAATACCAAAGACTATTCATCCCAATGCAAGGGCCAATTTTCCAAAACCATGGGTCTTCCATGTGTGCACATGATCAAGGAGATGAGGATTGAAGTGCTGCCTTTAAATCAGATTCATGAGCAATGGAGGATTGACACAAGATCATTCACTAATGATCATTGTGCAAGCTTGGATCATGAAGATCCATTTAGTAGTCTTTTATTTGAGGTTAAGGAGAAGTATGAAAAACAGCCGCTTATGCAAAAAGAAAATACATTAAGGCAGCTTTCTCAGATTCTTGGTGCATCTTGTCCTTTAATTTTTGAACCTACTCTTCAACCTCACAAAGGCCGTCCGGTAGGATCAAATAAAAGAAAGGAAACTAGCTCTACAAGGCGGGAACCTTCATATTTTGAGAGAGTGGAGAAGGCACCTCGAAAATGTAGTGGATGCGGTAATATTGGCCATTATCGTAACAATCTCTTTGTTATACTAACTGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE

Protein Analysis

673

Amino Acids

77.39

Weight (kDa)

9.13

Isoelectric Point (pI)

46.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ZSWIM1-3_RNaseH-like PF21056 227 - 338 1.6e-09 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE PF10551 256 - 350 1.1e-20 MULE transposase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000143)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G76710 AT1G76710 AT1G76710 AT1G76710
fragaria_vesca FvH4_1g20063 FvH4_2g15231 FvH4_3g04011 FvH4_3g28681 FvH4_4g01411 FvH4_4g10181 FvH4_4g15922 FvH4_4g16651 FvH4_4g16652 FvH4_5g13892 FvH4_5g13893 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g25511 FvH4_6g12551 FvH4_6g12552 FvH4_6g38841 FvH4_7g04391
malus_domestica MD05G1031300.v1.1 MD05G1031400.v1.1 MD05G1031500.v1.1 MD08G1164400.v1.1 MD10G1032900.v1.1 MD10G1033000.v1.1 MD10G1033100.v1.1
prunus_persica Prupe.3G240700_v2.0.a1 Prupe.7G144600_v2.0.a1 Prupe.8G038500_v2.0.a1 Prupe.8G038500_v2.0.a1
pyrus_communis pycom05g02250 pycom05g02260 pycom05g02270 pycom05g02280 pycom08g14160 pycom10g02100 pycom10g02110 pycom10g02130
rosa_chinensis RchiOBHm_Chr1g0329481 RchiOBHm_Chr1g0329491 RchiOBHm_Chr1g0341531 RchiOBHm_Chr3g0464811 RchiOBHm_Chr3g0494701 RchiOBHm_Chr3g0497501 RchiOBHm_Chr4g0385841 RchiOBHm_Chr5g0061181 RchiOBHm_Chr6g0263001 RchiOBHm_Chr7g0193111 RchiOBHm_Chr7g0206281 RchiOBHm_Chr7g0206311
rosa_laevigata RLG00000018908 RLG00000028528 RLG00000028803 RLG00000029882 RLG00000029883 RLG00000030361
rosa_multiflora Rmu_co8196328.1_g000001 Rmu_co8259135.1_g000001 Rmu_co8269185.1_g000001 Rmu_sc0000076.1_g000019 Rmu_sc0000311.1_g000007 Rmu_sc0000429.1_g000038 Rmu_sc0000429.1_g000039 Rmu_sc0000429.1_g000040 Rmu_sc0000511.1_g000005 Rmu_sc0000539.1_g000054 Rmu_sc0000566.1_g000039 Rmu_sc0000805.1_g000032 Rmu_sc0000870.1_g000073 Rmu_sc0000870.1_g000074 Rmu_sc0001010.1_g000018 Rmu_sc0001083.1_g000013 Rmu_sc0001114.1_g000011 Rmu_sc0001702.1_g000027 Rmu_sc0001779.1_g000012 Rmu_sc0002923.1_g000036 Rmu_sc0003242.1_g000011 Rmu_sc0003291.1_g000036 Rmu_sc0003393.1_g000012 Rmu_sc0003872.1_g000016 Rmu_sc0003872.1_g000017 Rmu_sc0003872.1_g000018 Rmu_sc0004084.1_g000020 Rmu_sc0004386.1_g000005 Rmu_sc0004622.1_g000005 Rmu_sc0004742.1_g000021 Rmu_sc0004755.1_g000020 Rmu_sc0004805.1_g000036 Rmu_sc0005065.1_g000006 Rmu_sc0005177.1_g000004 Rmu_sc0006373.1_g000003 Rmu_sc0006373.1_g000004 Rmu_sc0007121.1_g000002 Rmu_sc0007943.1_g000003 Rmu_sc0010368.1_g000006 Rmu_sc0010543.1_g000001 Rmu_sc0012591.1_g000006 Rmu_sc0013504.1_g000009 Rmu_sc0015025.1_g000001 Rmu_sc0016170.1_g000001 Rmu_sc0017156.1_g000001 Rmu_sc0026439.1_g000001
rosa_roxburghii Rroxscaffold_175G00432280 Rroxscaffold_1G00030190 Rroxscaffold_1G00030880 Rroxscaffold_2G00090520 Rroxscaffold_3G00227940 Rroxscaffold_3G00233400 Rroxscaffold_3G00238500 Rroxscaffold_3G00251650 Rroxscaffold_4G00301570 Rroxscaffold_4G00321040 Rroxscaffold_5G00350880 Rroxscaffold_7G00184400
rosa_rugosa Rorug01G0080800 Rorug01G0080900 Rorug01G0193900 Rorug02G0275900 Rorug02G0275900 Rorug02G0275900 Rorug02G0305400 Rorug02G0311800 Rorug02G0350400 Rorug02G0381300 Rorug03G0136700 Rorug03G0181900 Rorug03G0268000 Rorug04G0301600 Rorug05G0175100 Rorug05G0250700 Rorug05G0298200 Rorug05G0596000 Rorug06G0029500 Rorug07G0094300 Rorug07G0094300 Rorug07G0095400 Rorug07G0140100
rosa_samantha Rh1AG099200 Rh1AG190500 Rh1BG078900 Rh1BG079000 Rh1BG079100 Rh1CG084600 Rh1CG084700 Rh1CG095300 Rh1CG175900 Rh1DG103300 Rh1DG150400 Rh2AG079300 Rh2AG272400 Rh2AG464800 Rh2AG507400 Rh2DG078300 Rh2DG078400 Rh3CG206900 Rh3CG295400 Rh3DG206800 Rh3DG356200 Rh4CG071500 Rh4CG179200 Rh4DG064700 Rh5CG362400 Rh7AG212300 Rh7AG226200 Rh7BG222200
rosa_wichuraiana Rw0G009990 Rw0G011260 Rw0G011270 Rw0G012910 Rw0G013740 Rw1G007740 Rw1G013050 Rw1G014230 Rw2G014270 Rw3G012720 Rw3G028110 Rw4G006630 Rw4G015270 Rw4G016160 Rw4G031380 Rw5G011440 Rw5G029180 Rw5G048360 Rw5G048430 Rw5G048780 Rw6G005250 Rw6G006390 Rw7G002840 Rw7G014080 Rw7G019650 Rw7G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 789
AccB1I GGYRCC 1 cut(s) 1948
AccI GTMKAC 1 cut(s) 1145
AciI CCGC 3 cut(s) 1772, 1915, 1971
AclWI GGATC 3 cut(s) 1715, 1719, 1888
AcoI YGGCCR 1 cut(s) 1981
AcsI RAATTY 4 cut(s) 152, 319, 354, 525
AfaI GTAC 5 cut(s) 784, 803, 993, 1120, 1184
AfiI CCNNNNNNNGG 2 cut(s) 1567, 1865
AflIII ACRYGT 1 cut(s) 1140
AjiI CACGTC 3 cut(s) 521, 735, 1141
Alw21I GWGCWC 2 cut(s) 1315, 1608
Alw26I GTCTC 1 cut(s) 1361
Alw44I GTGCAC 2 cut(s) 1311, 1604
AlwI GGATC 3 cut(s) 1715, 1719, 1888
AoxI GGCC 4 cut(s) 103, 1570, 1867, 1981
ApaI GGGCCC 1 cut(s) 107
ApaLI GTGCAC 2 cut(s) 1311, 1604
ApeKI GCWGC 3 cut(s) 205, 1636, 1801
ApoI RAATTY 4 cut(s) 152, 319, 354, 525
AseI ATTAAT 2 cut(s) 980, 1485
Asp700I GAANNNNTTC 2 cut(s) 174, 1437
AspS9I GGNCC 4 cut(s) 103, 104, 1260, 1570
AsuC2I CCSGG 2 cut(s) 503, 1264
AvaII GGWCC 1 cut(s) 1260
BaeGI GKGCMC 3 cut(s) 107, 1315, 1608
BalI TGGCCA 1 cut(s) 1983
BanI GGYRCC 1 cut(s) 1948
BanII GRGCYC 2 cut(s) 107, 907
BbsI GAAGAC 3 cut(s) 177, 1101, 1586
Bbv12I GWGCWC 2 cut(s) 1315, 1608
BbvI GCAGC 3 cut(s) 192, 1623, 1813
BccI CCATC 2 cut(s) 769, 929
BceAI ACGGC 1 cut(s) 1854
BclI TGATCA 3 cut(s) 691, 1611, 1693
BcnI CCSGG 2 cut(s) 503, 1264
BcoDI GTCTC 1 cut(s) 1361
BfaI CTAG 4 cut(s) 563, 617, 1299, 1902
BglI GCCNNNNNGGC 1 cut(s) 507
BglII AGATCT 1 cut(s) 233
BisI GCNGC 4 cut(s) 206, 1637, 1772, 1802
BlsI GCNGC 4 cut(s) 207, 1638, 1773, 1803
Bme1390I CCNGG 2 cut(s) 503, 1264
Bme18I GGWCC 1 cut(s) 1260
BmgBI CACGTC 3 cut(s) 521, 735, 1141
BmgT120I GGNCC 4 cut(s) 103, 104, 1260, 1570
BmiI GGNNCC 6 cut(s) 105, 106, 1166, 1321, 1920, 1950
BmrFI CCNGG 2 cut(s) 503, 1264
BmsI GCATC 6 cut(s) 118, 798, 1075, 1470, 1832, 1958
BpiI GAAGAC 3 cut(s) 177, 1101, 1586
BpuEI CTTGAG 2 cut(s) 323, 839
BpuMI CCSGG 2 cut(s) 503, 1264
BsaBI GATNNNNATC 1 cut(s) 939
BsaI GGTCTC 1 cut(s) 1361
BsaJI CCNNGG 2 cut(s) 1232, 1587
BsaWI WCCGGW 1 cut(s) 1873
BsaXI ACNNNNNCTCC 2 cut(s) 598, 628
Bsc4I CCNNNNNNNGG 2 cut(s) 1567, 1865
Bse1I ACTGG 1 cut(s) 1354
Bse3DI GCAATG 1 cut(s) 1667
Bse8I GATNNNNATC 1 cut(s) 939
BseDI CCNNGG 2 cut(s) 1232, 1587
BseGI GGATG 6 cut(s) 445, 727, 943, 1461, 1556, 1973
BseJI GATNNNNATC 1 cut(s) 939
BseLI CCNNNNNNNGG 2 cut(s) 1567, 1865
BseMI GCAATG 1 cut(s) 1667
BseMII CTCAG 2 cut(s) 193, 1823
BseNI ACTGG 1 cut(s) 1354
BseRI GAGGAG 1 cut(s) 320
BseSI GKGCMC 3 cut(s) 107, 1315, 1608
BseXI GCAGC 3 cut(s) 192, 1623, 1813
BshFI GGCC 4 cut(s) 105, 1572, 1869, 1983
BshNI GGYRCC 1 cut(s) 1948
BsiHKAI GWGCWC 2 cut(s) 1315, 1608
BsiSI CCGG 3 cut(s) 502, 1263, 1874
BslFI GGGAC 1 cut(s) 1151
BslI CCNNNNNNNGG 2 cut(s) 1567, 1865
BsmAI GTCTC 1 cut(s) 1361
BsmFI GGGAC 1 cut(s) 1151
BsmI GAATGC 1 cut(s) 131
BsnI GGCC 4 cut(s) 105, 1572, 1869, 1983
Bso31I GGTCTC 1 cut(s) 1361
Bsp120I GGGCCC 1 cut(s) 103
Bsp1286I GDGCHC 4 cut(s) 107, 907, 1315, 1608
Bsp143I GATC 9 cut(s) 233, 556, 691, 1611, 1679, 1693, 1711, 1720, 1880
Bsp19I CCATGG 2 cut(s) 1232, 1587
BspACI CCGC 3 cut(s) 1772, 1915, 1971
BspANI GGCC 4 cut(s) 105, 1572, 1869, 1983
BspCNI CTCAG 2 cut(s) 192, 1822
BspHI TCATGA 2 cut(s) 1654, 1714
BspLI GGNNCC 6 cut(s) 105, 106, 1166, 1321, 1920, 1950
BspPI GGATC 3 cut(s) 1715, 1719, 1888
BspT107I GGYRCC 1 cut(s) 1948
BspTNI GGTCTC 1 cut(s) 1361
BsrDI GCAATG 1 cut(s) 1667
BsrI ACTGG 1 cut(s) 1354
BssECI CCNNGG 2 cut(s) 1232, 1587
BssMI GATC 9 cut(s) 233, 556, 691, 1611, 1679, 1693, 1711, 1720, 1880
BssT1I CCWWGG 2 cut(s) 1232, 1587
Bst4CI ACNGT 3 cut(s) 46, 1169, 2017
Bst6I CTCTTC 3 cut(s) 26, 538, 1857
BstAPI GCANNNNNTGC 1 cut(s) 1310
BstC8I GCNNGC 2 cut(s) 508, 1705
BstDEI CTNAG 2 cut(s) 179, 1809
BstDSI CCRYGG 2 cut(s) 1232, 1587
BstENI CCTNNNNNAGG 1 cut(s) 1863
BstF5I GGATG 6 cut(s) 445, 727, 943, 1461, 1556, 1973
BstKTI GATC 9 cut(s) 236, 559, 694, 1614, 1682, 1696, 1714, 1723, 1883
BstMAI GTCTC 1 cut(s) 1361
BstMBI GATC 9 cut(s) 233, 556, 691, 1611, 1679, 1693, 1711, 1720, 1880
BstMWI GCNNNNNNNGC 3 cut(s) 507, 1310, 1777
BstSCI CCNGG 2 cut(s) 501, 1262
BstSLI GKGCMC 3 cut(s) 107, 1315, 1608
BstV1I GCAGC 3 cut(s) 192, 1623, 1813
BstV2I GAAGAC 3 cut(s) 177, 1101, 1586
BstX2I RGATCY 2 cut(s) 233, 1720
BstXI CCANNNNNNTGG 2 cut(s) 436, 1588
BstYI RGATCY 2 cut(s) 233, 1720
BsuRI GGCC 4 cut(s) 105, 1572, 1869, 1983
BtgI CCRYGG 2 cut(s) 1232, 1587
BtrI CACGTC 3 cut(s) 521, 735, 1141
BtsCI GGATG 6 cut(s) 445, 727, 943, 1461, 1556, 1973
BtsIMutI CAGTG 2 cut(s) 187, 905
Cac8I GCNNGC 2 cut(s) 508, 1705
CciI TCATGA 2 cut(s) 1654, 1714
Cfr13I GGNCC 4 cut(s) 103, 104, 1260, 1570
Csp6I GTAC 5 cut(s) 783, 802, 992, 1119, 1183
CspCI CAANNNNNGTGG 2 cut(s) 721, 756
CviQI GTAC 5 cut(s) 783, 802, 992, 1119, 1183
DdeI CTNAG 2 cut(s) 179, 1809
DpnI GATC 9 cut(s) 235, 558, 693, 1613, 1681, 1695, 1713, 1722, 1882
DpnII GATC 9 cut(s) 233, 556, 691, 1611, 1679, 1693, 1711, 1720, 1880
DraI TTTAAA 2 cut(s) 1474, 1644
EaeI YGGCCR 1 cut(s) 1981
Eam1104I CTCTTC 3 cut(s) 26, 538, 1857
EarI CTCTTC 3 cut(s) 26, 538, 1857
Eco130I CCWWGG 2 cut(s) 1232, 1587
Eco24I GRGCYC 2 cut(s) 107, 907
Eco31I GGTCTC 1 cut(s) 1361
Eco47I GGWCC 1 cut(s) 1260
EcoNI CCTNNNNNAGG 1 cut(s) 1863
EcoO109I RGGNCCY 1 cut(s) 104
EcoRI GAATTC 1 cut(s) 319
EcoT14I CCWWGG 2 cut(s) 1232, 1587
EcoT22I ATGCAT 2 cut(s) 133, 1031
EcoT38I GRGCYC 2 cut(s) 107, 907
ErhI CCWWGG 2 cut(s) 1232, 1587
FaqI GGGAC 1 cut(s) 1151
FauI CCCGC 1 cut(s) 1908
FauNDI CATATG 1 cut(s) 1031
FbaI TGATCA 3 cut(s) 691, 1611, 1693
FblI GTMKAC 1 cut(s) 1145
Fnu4HI GCNGC 4 cut(s) 206, 1637, 1772, 1802
FokI GGATG 6 cut(s) 432, 714, 930, 1448, 1543, 1980
FriOI GRGCYC 2 cut(s) 107, 907
Fsp4HI GCNGC 4 cut(s) 206, 1637, 1772, 1802
FspBI CTAG 4 cut(s) 563, 617, 1299, 1902
GluI GCNGC 4 cut(s) 206, 1637, 1772, 1802
HaeIII GGCC 4 cut(s) 105, 1572, 1869, 1983
HapII CCGG 3 cut(s) 502, 1263, 1874
HincII GTYRAC 2 cut(s) 747, 1146
HindII GTYRAC 2 cut(s) 747, 1146
HindIII AAGCTT 3 cut(s) 1158, 1454, 1705
HinfI GANTC 6 cut(s) 613, 709, 1012, 1438, 1651, 1813
HpaII CCGG 3 cut(s) 502, 1263, 1874
Hpy166II GTNNAC 5 cut(s) 465, 747, 1146, 1313, 1606
Hpy188I TCNGA 5 cut(s) 127, 336, 1008, 1650, 1812
Hpy188III TCNNGA 9 cut(s) 167, 394, 554, 573, 908, 1299, 1406, 1655, 1715
Hpy8I GTNNAC 5 cut(s) 465, 747, 1146, 1313, 1606
Hpy99I CGWCG 2 cut(s) 151, 462
HpyCH4III ACNGT 3 cut(s) 46, 1169, 2017
HpyCH4IV ACGT 3 cut(s) 520, 734, 1140
HpyF10VI GCNNNNNNNGC 3 cut(s) 507, 1310, 1777
HpyF3I CTNAG 2 cut(s) 179, 1809
HpySE526I ACGT 3 cut(s) 520, 734, 1140
Ksp22I TGATCA 3 cut(s) 691, 1611, 1693
Kzo9I GATC 9 cut(s) 233, 556, 691, 1611, 1679, 1693, 1711, 1720, 1880
Lsp1109I GCAGC 3 cut(s) 192, 1623, 1813
LweI GCATC 6 cut(s) 118, 798, 1075, 1470, 1832, 1958
MaeI CTAG 4 cut(s) 563, 617, 1299, 1902
MaeII ACGT 3 cut(s) 520, 734, 1140
MaeIII GTNAC 4 cut(s) 408, 1291, 1515, 1991
MalI GATC 9 cut(s) 235, 558, 693, 1613, 1681, 1695, 1713, 1722, 1882
MboI GATC 9 cut(s) 233, 556, 691, 1611, 1679, 1693, 1711, 1720, 1880
MfeI CAATTG 1 cut(s) 33
MflI RGATCY 2 cut(s) 233, 1720
MhlI GDGCHC 4 cut(s) 107, 907, 1315, 1608
MlsI TGGCCA 1 cut(s) 1983
MluNI TGGCCA 1 cut(s) 1983
MlyI GAGTC 3 cut(s) 622, 703, 1006
Mox20I TGGCCA 1 cut(s) 1983
Mph1103I ATGCAT 2 cut(s) 133, 1031
MroXI GAANNNNTTC 2 cut(s) 174, 1437
MscI TGGCCA 1 cut(s) 1983
MslI CAYNNNNRTG 3 cut(s) 417, 434, 1561
Msp20I TGGCCA 1 cut(s) 1983
MspI CCGG 3 cut(s) 502, 1263, 1874
MspR9I CCNGG 2 cut(s) 503, 1264
MunI CAATTG 1 cut(s) 33
Mva1269I GAATGC 1 cut(s) 131
MwoI GCNNNNNNNGC 3 cut(s) 507, 1310, 1777
NciI CCSGG 2 cut(s) 503, 1264
NcoI CCATGG 2 cut(s) 1232, 1587
NdeI CATATG 1 cut(s) 1031
NdeII GATC 9 cut(s) 233, 556, 691, 1611, 1679, 1693, 1711, 1720, 1880
NlaIV GGNNCC 6 cut(s) 105, 106, 1166, 1321, 1920, 1950
NsiI ATGCAT 2 cut(s) 133, 1031
PagI TCATGA 2 cut(s) 1654, 1714
PctI GAATGC 1 cut(s) 131
PdmI GAANNNNTTC 2 cut(s) 174, 1437
PfeI GAWTC 3 cut(s) 1438, 1651, 1813
PkrI GCNGC 4 cut(s) 207, 1638, 1773, 1803
PleI GAGTC 3 cut(s) 621, 703, 1006
PpsI GAGTC 3 cut(s) 621, 703, 1006
PshBI ATTAAT 2 cut(s) 980, 1485
PsiI TTATAA 1 cut(s) 789
PspN4I GGNNCC 6 cut(s) 105, 106, 1166, 1321, 1920, 1950
PspOMI GGGCCC 1 cut(s) 103
PspPI GGNCC 4 cut(s) 103, 104, 1260, 1570
PsrI GAACNNNNNNTAC 2 cut(s) 280, 312
PsuI RGATCY 2 cut(s) 233, 1720
RsaI GTAC 5 cut(s) 784, 803, 993, 1120, 1184
RsaNI GTAC 5 cut(s) 783, 802, 992, 1119, 1183
RseI CAYNNNNRTG 3 cut(s) 417, 434, 1561
SalI GTCGAC 1 cut(s) 1144
SatI GCNGC 4 cut(s) 206, 1637, 1772, 1802
Sau3AI GATC 9 cut(s) 233, 556, 691, 1611, 1679, 1693, 1711, 1720, 1880
Sau96I GGNCC 4 cut(s) 103, 104, 1260, 1570
SchI GAGTC 3 cut(s) 622, 703, 1006
ScrFI CCNGG 2 cut(s) 503, 1264
SduI GDGCHC 4 cut(s) 107, 907, 1315, 1608
SfaNI GCATC 6 cut(s) 118, 798, 1075, 1470, 1832, 1958
SinI GGWCC 1 cut(s) 1260
SmiMI CAYNNNNRTG 3 cut(s) 417, 434, 1561
SmlI CTYRAG 2 cut(s) 302, 818
SmoI CTYRAG 2 cut(s) 302, 818
SsiI CCGC 3 cut(s) 1772, 1915, 1971
SspI AATATT 4 cut(s) 1051, 1378, 1529, 1978
SspMI CTAG 4 cut(s) 563, 617, 1299, 1902
StyD4I CCNGG 2 cut(s) 501, 1262
StyI CCWWGG 2 cut(s) 1232, 1587
TaaI ACNGT 3 cut(s) 46, 1169, 2017
TaiI ACGT 3 cut(s) 523, 737, 1143
TaqI TCGA 8 cut(s) 146, 166, 286, 393, 541, 836, 1145, 1954
TatI WGTACW 4 cut(s) 782, 801, 991, 1182
TauI GCSGC 1 cut(s) 1774
TfiI GAWTC 3 cut(s) 1438, 1651, 1813
TscAI CASTG 2 cut(s) 187, 905
TseI GCWGC 3 cut(s) 205, 1636, 1801
TspDTI ATGAA 9 cut(s) 489, 860, 998, 1170, 1545, 1643, 1731, 1776, 1914
TspGWI ACGGA 1 cut(s) 1349
TspRI CASTG 2 cut(s) 187, 905
VneI GTGCAC 2 cut(s) 1311, 1604
VpaK11BI GGWCC 1 cut(s) 1260
VspI ATTAAT 2 cut(s) 980, 1485
XagI CCTNNNNNAGG 1 cut(s) 1863
XapI RAATTY 4 cut(s) 152, 319, 354, 525
XbaI TCTAGA 1 cut(s) 1298
XmiI GTMKAC 1 cut(s) 1145
XmnI GAANNNNTTC 2 cut(s) 174, 1437
XspI CTAG 4 cut(s) 563, 617, 1299, 1902
Zsp2I ATGCAT 2 cut(s) 133, 1031
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.