Rmu_sc0004386.1_g000005

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004386.1
OG0000143
Physical Location & Seq
Forward (+)
29081 .. 32263
3183 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004386.1_g000005.1.cds

Sequence Viewer

Length: 1521 bp
atgaagtctgatataaatacacaagaatctgatgaagatagtcgaaatgaaaagggtccgaggcttactagtacaaagaaatgtggatgcccattttcattaagaggcatcaatattgaaaatggagacgaatggaagttagaggtggtttgtggagtgcataatcatgctgcttcagaataccttcatgggcactcatttgcaggtcgattgtcagaaaaagaaaattcgttgttggtggatatgtccatgagtttaatgaggcctaaagagattttgaccgccatcaagagaagaaatccgaagaatgtgacagcaatgaagacaatatataattccagacaacgatataggacaaaaattagggctgggagaacacaaatgcagcaactgctaagtaacttgtttgagcacaagtatattgagcatcatagaagtgatggtgataaagtaacagatttgttttggtgtcacccttacagcattgagattttacgtacatttccacatgtacttatcatggattgcacttacaaaacaaatagatatcgctttccacttctggagattgttgggatcacgtccactaacaagaccttcaacgttgcattttcttacatatcaaaagagaaagaagacaactatacatgggccttaactagattaaagactcttttagatgacaaatgtgctccaagtgtgatggttacagatcgagaattggcactgatgaattctataagtaattttgtggaggaaattgatccccaagaaaaagttatggtaagaccacgtttgacacaattacaaaaatggttggaagaacaagatgatgaaaccaagagacaagttttgctcaagattgatgagcttataaatccaagttgcacaatgcttcaagaaccaaatgagaagattaaaaccaaagggcgtctttctaagattgacagtattactcgtcgtctaccatctacttttgagattgccgaggctttttccgtacatggaagttcatttgatgttgagtctgatggtaattgtggttatagagttgtagcatcggctatgggatttgataggcgtttttggcaaagagttttagatctaatgaatgagctaaaaagtaagccccacttgtacatgaaactatatggtagcgaaggcagtgtagagaatatcaaacagagactgaaccattctggatctactgcaccacgtagaaaatggatgtgtataacagagatggggcatttgatcgctacttgctatggagttgttgcgataaacttatctgataaacagtctcttaccttccttcctttaacaaaacacattactggacgatttcataaccaagaactgcctgaaattggaattggttttgttaacggagaccactttgtgcaagtacaccgccaggcgggctacaacctcagcgtcggatcaccctcagatcaccaccgacgcgccgccacgcgccgtgccaaaatggcatcagtagctcccagagctgggaactga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AFT FAR1 MULE

Protein Analysis

506

Amino Acids

58.06

Weight (kDa)

9.15

Isoelectric Point (pI)

46.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000143)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G76710 AT1G76710 AT1G76710 AT1G76710
fragaria_vesca FvH4_1g20063 FvH4_2g15231 FvH4_3g04011 FvH4_3g28681 FvH4_4g01411 FvH4_4g10181 FvH4_4g15922 FvH4_4g16651 FvH4_4g16652 FvH4_5g13892 FvH4_5g13893 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g25511 FvH4_6g12551 FvH4_6g12552 FvH4_6g38841 FvH4_7g04391
malus_domestica MD05G1031300.v1.1 MD05G1031400.v1.1 MD05G1031500.v1.1 MD08G1164400.v1.1 MD10G1032900.v1.1 MD10G1033000.v1.1 MD10G1033100.v1.1
prunus_persica Prupe.3G240700_v2.0.a1 Prupe.7G144600_v2.0.a1 Prupe.8G038500_v2.0.a1 Prupe.8G038500_v2.0.a1
pyrus_communis pycom05g02250 pycom05g02260 pycom05g02270 pycom05g02280 pycom08g14160 pycom10g02100 pycom10g02110 pycom10g02130
rosa_chinensis RchiOBHm_Chr1g0329481 RchiOBHm_Chr1g0329491 RchiOBHm_Chr1g0341531 RchiOBHm_Chr3g0464811 RchiOBHm_Chr3g0494701 RchiOBHm_Chr3g0497501 RchiOBHm_Chr4g0385841 RchiOBHm_Chr5g0061181 RchiOBHm_Chr6g0263001 RchiOBHm_Chr7g0193111 RchiOBHm_Chr7g0206281 RchiOBHm_Chr7g0206311
rosa_laevigata RLG00000018908 RLG00000028528 RLG00000028803 RLG00000029882 RLG00000029883 RLG00000030361
rosa_multiflora Rmu_co8196328.1_g000001 Rmu_co8259135.1_g000001 Rmu_co8269185.1_g000001 Rmu_sc0000076.1_g000019 Rmu_sc0000311.1_g000007 Rmu_sc0000429.1_g000038 Rmu_sc0000429.1_g000039 Rmu_sc0000429.1_g000040 Rmu_sc0000511.1_g000005 Rmu_sc0000539.1_g000054 Rmu_sc0000566.1_g000039 Rmu_sc0000805.1_g000032 Rmu_sc0000870.1_g000073 Rmu_sc0000870.1_g000074 Rmu_sc0001010.1_g000018 Rmu_sc0001083.1_g000013 Rmu_sc0001114.1_g000011 Rmu_sc0001702.1_g000027 Rmu_sc0001779.1_g000012 Rmu_sc0002923.1_g000036 Rmu_sc0003242.1_g000011 Rmu_sc0003291.1_g000036 Rmu_sc0003393.1_g000012 Rmu_sc0003872.1_g000016 Rmu_sc0003872.1_g000017 Rmu_sc0003872.1_g000018 Rmu_sc0004084.1_g000020 Rmu_sc0004386.1_g000005 Rmu_sc0004622.1_g000005 Rmu_sc0004742.1_g000021 Rmu_sc0004755.1_g000020 Rmu_sc0004805.1_g000036 Rmu_sc0005065.1_g000006 Rmu_sc0005177.1_g000004 Rmu_sc0006373.1_g000003 Rmu_sc0006373.1_g000004 Rmu_sc0007121.1_g000002 Rmu_sc0007943.1_g000003 Rmu_sc0010368.1_g000006 Rmu_sc0010543.1_g000001 Rmu_sc0012591.1_g000006 Rmu_sc0013504.1_g000009 Rmu_sc0015025.1_g000001 Rmu_sc0016170.1_g000001 Rmu_sc0017156.1_g000001 Rmu_sc0026439.1_g000001
rosa_roxburghii Rroxscaffold_175G00432280 Rroxscaffold_1G00030190 Rroxscaffold_1G00030880 Rroxscaffold_2G00090520 Rroxscaffold_3G00227940 Rroxscaffold_3G00233400 Rroxscaffold_3G00238500 Rroxscaffold_3G00251650 Rroxscaffold_4G00301570 Rroxscaffold_4G00321040 Rroxscaffold_5G00350880 Rroxscaffold_7G00184400
rosa_rugosa Rorug01G0080800 Rorug01G0080900 Rorug01G0193900 Rorug02G0275900 Rorug02G0275900 Rorug02G0275900 Rorug02G0305400 Rorug02G0311800 Rorug02G0350400 Rorug02G0381300 Rorug03G0136700 Rorug03G0181900 Rorug03G0268000 Rorug04G0301600 Rorug05G0175100 Rorug05G0250700 Rorug05G0298200 Rorug05G0596000 Rorug06G0029500 Rorug07G0094300 Rorug07G0094300 Rorug07G0095400 Rorug07G0140100
rosa_samantha Rh1AG099200 Rh1AG190500 Rh1BG078900 Rh1BG079000 Rh1BG079100 Rh1CG084600 Rh1CG084700 Rh1CG095300 Rh1CG175900 Rh1DG103300 Rh1DG150400 Rh2AG079300 Rh2AG272400 Rh2AG464800 Rh2AG507400 Rh2DG078300 Rh2DG078400 Rh3CG206900 Rh3CG295400 Rh3DG206800 Rh3DG356200 Rh4CG071500 Rh4CG179200 Rh4DG064700 Rh5CG362400 Rh7AG212300 Rh7AG226200 Rh7BG222200
rosa_wichuraiana Rw0G009990 Rw0G011260 Rw0G011270 Rw0G012910 Rw0G013740 Rw1G007740 Rw1G013050 Rw1G014230 Rw2G014270 Rw3G012720 Rw3G028110 Rw4G006630 Rw4G015270 Rw4G016160 Rw4G031380 Rw5G011440 Rw5G029180 Rw5G048360 Rw5G048430 Rw5G048780 Rw6G005250 Rw6G006390 Rw7G002840 Rw7G014080 Rw7G019650 Rw7G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 875
Acc36I ACCTGC 1 cut(s) 194
AccI GTMKAC 1 cut(s) 964
AccII CGCG 2 cut(s) 1467, 1477
AciI CCGC 4 cut(s) 282, 1414, 1421, 1470
AclI AACGTT 1 cut(s) 603
AclWI GGATC 4 cut(s) 584, 758, 1210, 1450
AcsI RAATTY 2 cut(s) 226, 733
AcuI CTGAAG 1 cut(s) 159
AcyI GRCGYC 1 cut(s) 931
AdeI CACNNNGTG 1 cut(s) 1402
AfaI GTAC 6 cut(s) 73, 499, 513, 1002, 1139, 1410
AfiI CCNNNNNNNGG 4 cut(s) 1370, 1420, 1511, 1512
AflIII ACRYGT 1 cut(s) 508
AgsI TTSAA 3 cut(s) 119, 601, 899
AhlI ACTAGT 1 cut(s) 68
AjiI CACGTC 1 cut(s) 582
AjnI CCWGG 1 cut(s) 1416
AjuI GAANNNNNNNTTGG 2 cut(s) 1359, 1391
AluBI AGCT 4 cut(s) 871, 1117, 1502, 1511
AluI AGCT 4 cut(s) 871, 1117, 1502, 1511
Alw21I GWGCWC 2 cut(s) 414, 694
Alw26I GTCTC 5 cut(s) 120, 838, 1180, 1308, 1386
AlwI GGATC 4 cut(s) 584, 758, 1210, 1450
AlwNI CAGNNNCTG 2 cut(s) 391, 1189
AoxI GGCC 2 cut(s) 263, 651
ApeKI GCWGC 2 cut(s) 170, 385
ApoI RAATTY 2 cut(s) 226, 733
Asp700I GAANNNNTTC 1 cut(s) 183
AspLEI GCGC 2 cut(s) 1469, 1479
AspS9I GGNCC 2 cut(s) 56, 651
AsuHPI GGTGA 4 cut(s) 455, 464, 1437, 1448
AvaII GGWCC 1 cut(s) 56
BaeGI GKGCMC 1 cut(s) 195
BbsI GAAGAC 2 cut(s) 329, 642
Bbv12I GWGCWC 2 cut(s) 414, 694
BbvCI CCTCAGC 1 cut(s) 1433
BbvI GCAGC 2 cut(s) 157, 397
BccI CCATC 6 cut(s) 293, 434, 697, 976, 1025, 1237
BceAI ACGGC 1 cut(s) 1464
BciT130I CCWGG 1 cut(s) 1418
BcoDI GTCTC 5 cut(s) 120, 838, 1180, 1308, 1386
BcuI ACTAGT 1 cut(s) 68
BfaI CTAG 2 cut(s) 69, 660
BfuAI ACCTGC 1 cut(s) 194
BglI GCCNNNNNGGC 2 cut(s) 1422, 1490
BglII AGATCT 1 cut(s) 1102
BisI GCNGC 3 cut(s) 171, 386, 1470
BlsI GCNGC 3 cut(s) 172, 387, 1471
Bme1390I CCNGG 1 cut(s) 1418
Bme18I GGWCC 1 cut(s) 56
BmgBI CACGTC 1 cut(s) 582
BmgT120I GGNCC 2 cut(s) 56, 651
BmiI GGNNCC 1 cut(s) 57
BmrFI CCNGG 1 cut(s) 1418
BmsI GCATC 5 cut(s) 77, 117, 436, 1067, 1502
BpiI GAAGAC 2 cut(s) 329, 642
BpmI CTGGAG 1 cut(s) 584
Bpu10I CCTNAGC 1 cut(s) 1433
BpuEI CTTGAG 1 cut(s) 842
BsaAI YACGTR 2 cut(s) 497, 1217
BsaHI GRCGYC 1 cut(s) 931
BsaI GGTCTC 1 cut(s) 1386
BsaJI CCNNGG 2 cut(s) 59, 987
Bsc4I CCNNNNNNNGG 4 cut(s) 1370, 1420, 1511, 1512
Bse1I ACTGG 1 cut(s) 1342
Bse3DI GCAATG 1 cut(s) 324
BseBI CCWGG 1 cut(s) 1418
BseDI CCNNGG 2 cut(s) 59, 987
BseGI GGATG 2 cut(s) 92, 1233
BseLI CCNNNNNNNGG 4 cut(s) 1370, 1420, 1511, 1512
BseMI GCAATG 1 cut(s) 324
BseMII CTCAG 2 cut(s) 1447, 1464
BseNI ACTGG 1 cut(s) 1342
BseSI GKGCMC 1 cut(s) 195
BseXI GCAGC 2 cut(s) 157, 397
BseYI CCCAGC 2 cut(s) 368, 1511
BsgI GTGCAG 1 cut(s) 1194
Bsh1236I CGCG 2 cut(s) 1467, 1477
BshFI GGCC 2 cut(s) 265, 653
BsiHKAI GWGCWC 2 cut(s) 414, 694
BslI CCNNNNNNNGG 4 cut(s) 1370, 1420, 1511, 1512
BsmAI GTCTC 5 cut(s) 120, 838, 1180, 1308, 1386
BsmBI CGTCTC 1 cut(s) 120
BsnI GGCC 2 cut(s) 265, 653
Bso31I GGTCTC 1 cut(s) 1386
Bsp1286I GDGCHC 3 cut(s) 195, 414, 694
Bsp1407I TGTACA 1 cut(s) 1137
Bsp143I GATC 8 cut(s) 576, 712, 763, 1102, 1202, 1254, 1442, 1453
BspACI CCGC 4 cut(s) 282, 1414, 1421, 1470
BspANI GGCC 2 cut(s) 265, 653
BspCNI CTCAG 2 cut(s) 1446, 1463
BspFNI CGCG 2 cut(s) 1467, 1477
BspLI GGNNCC 1 cut(s) 57
BspMI ACCTGC 1 cut(s) 194
BspPI GGATC 4 cut(s) 584, 758, 1210, 1450
BspTNI GGTCTC 1 cut(s) 1386
BsrDI GCAATG 1 cut(s) 324
BsrGI TGTACA 1 cut(s) 1137
BsrI ACTGG 1 cut(s) 1342
BssECI CCNNGG 2 cut(s) 59, 987
BssMI GATC 8 cut(s) 576, 712, 763, 1102, 1202, 1254, 1442, 1453
BssNI GRCGYC 1 cut(s) 931
Bst2UI CCWGG 1 cut(s) 1418
Bst4CI ACNGT 2 cut(s) 950, 1302
BstACI GRCGYC 1 cut(s) 931
BstAPI GCANNNNNTGC 1 cut(s) 391
BstAUI TGTACA 1 cut(s) 1137
BstBAI YACGTR 2 cut(s) 497, 1217
BstC8I GCNNGC 1 cut(s) 1423
BstDEI CTNAG 4 cut(s) 395, 939, 1433, 1450
BstF5I GGATG 2 cut(s) 92, 1233
BstFNI CGCG 2 cut(s) 1467, 1477
BstHHI GCGC 2 cut(s) 1469, 1479
BstKTI GATC 8 cut(s) 579, 715, 766, 1105, 1205, 1257, 1445, 1456
BstMAI GTCTC 5 cut(s) 120, 838, 1180, 1308, 1386
BstMBI GATC 8 cut(s) 576, 712, 763, 1102, 1202, 1254, 1442, 1453
BstMWI GCNNNNNNNGC 6 cut(s) 391, 1087, 1422, 1490, 1499, 1508
BstNI CCWGG 1 cut(s) 1418
BstNSI RCATGY 1 cut(s) 512
BstSCI CCNGG 1 cut(s) 1416
BstSLI GKGCMC 1 cut(s) 195
BstSNI TACGTA 1 cut(s) 497
BstUI CGCG 2 cut(s) 1467, 1477
BstV1I GCAGC 2 cut(s) 157, 397
BstV2I GAAGAC 2 cut(s) 329, 642
BstX2I RGATCY 2 cut(s) 1102, 1202
BstYI RGATCY 2 cut(s) 1102, 1202
BsuRI GGCC 2 cut(s) 265, 653
BtrI CACGTC 1 cut(s) 582
BtsCI GGATG 2 cut(s) 92, 1233
BtsI GCAGTG 1 cut(s) 1171
BtsIMutI CAGTG 2 cut(s) 725, 1171
BveI ACCTGC 1 cut(s) 194
Cac8I GCNNGC 1 cut(s) 1423
CaiI CAGNNNCTG 2 cut(s) 391, 1189
CfoI GCGC 2 cut(s) 1469, 1479
Cfr13I GGNCC 2 cut(s) 56, 651
CseI GACGC 3 cut(s) 920, 1426, 1473
Csp6I GTAC 6 cut(s) 72, 498, 512, 1001, 1138, 1409
CviAII CATG 8 cut(s) 167, 188, 250, 509, 520, 648, 1004, 1141
CviQI GTAC 6 cut(s) 72, 498, 512, 1001, 1138, 1409
DdeI CTNAG 4 cut(s) 395, 939, 1433, 1450
DpnI GATC 8 cut(s) 578, 714, 765, 1104, 1204, 1256, 1444, 1455
DpnII GATC 8 cut(s) 576, 712, 763, 1102, 1202, 1254, 1442, 1453
DraIII CACNNNGTG 1 cut(s) 1402
Eco105I TACGTA 1 cut(s) 497
Eco147I AGGCCT 1 cut(s) 265
Eco31I GGTCTC 1 cut(s) 1386
Eco32I GATATC 1 cut(s) 548
Eco47I GGWCC 1 cut(s) 56
Eco57I CTGAAG 1 cut(s) 159
EcoRI GAATTC 1 cut(s) 733
EcoRII CCWGG 1 cut(s) 1416
EcoRV GATATC 1 cut(s) 548
Esp3I CGTCTC 1 cut(s) 120
FaeI CATG 8 cut(s) 170, 191, 253, 512, 523, 651, 1007, 1144
FalI AAGNNNNNCTT 4 cut(s) 918, 950, 1118, 1150
FatI CATG 8 cut(s) 166, 187, 249, 508, 519, 647, 1003, 1140
FauI CCCGC 1 cut(s) 1414
FblI GTMKAC 1 cut(s) 964
Fnu4HI GCNGC 3 cut(s) 171, 386, 1470
FokI GGATG 2 cut(s) 99, 1240
Fsp4HI GCNGC 3 cut(s) 171, 386, 1470
FspBI CTAG 2 cut(s) 69, 660
GlaI GCGC 2 cut(s) 1468, 1478
GluI GCNGC 3 cut(s) 171, 386, 1470
GsaI CCCAGC 2 cut(s) 372, 1515
GsuI CTGGAG 1 cut(s) 584
HaeIII GGCC 2 cut(s) 265, 653
HgaI GACGC 3 cut(s) 920, 1426, 1473
HhaI GCGC 2 cut(s) 1469, 1479
Hin1I GRCGYC 1 cut(s) 931
Hin1II CATG 8 cut(s) 170, 191, 253, 512, 523, 651, 1007, 1144
Hin6I GCGC 2 cut(s) 1467, 1477
HinP1I GCGC 2 cut(s) 1467, 1477
HincII GTYRAC 1 cut(s) 1387
HindII GTYRAC 1 cut(s) 1387
HinfI GANTC 3 cut(s) 26, 670, 1025
HpaI GTTAAC 1 cut(s) 1387
HphI GGTGA 4 cut(s) 455, 464, 1437, 1448
Hpy166II GTNNAC 4 cut(s) 585, 965, 1387, 1411
Hpy188III TCNNGA 7 cut(s) 289, 339, 563, 716, 859, 899, 1200
Hpy8I GTNNAC 4 cut(s) 585, 965, 1387, 1411
Hpy99I CGWCG 3 cut(s) 963, 1442, 1467
HpyAV CCTTC 5 cut(s) 194, 607, 1154, 1321, 1325
HpyCH4III ACNGT 2 cut(s) 950, 1302
HpyCH4IV ACGT 5 cut(s) 496, 581, 603, 793, 1216
HpyCH4V TGCA 8 cut(s) 160, 203, 385, 528, 608, 888, 1211, 1405
HpyF10VI GCNNNNNNNGC 6 cut(s) 391, 1087, 1422, 1490, 1499, 1508
HpyF3I CTNAG 4 cut(s) 395, 939, 1433, 1450
HpySE526I ACGT 5 cut(s) 496, 581, 603, 793, 1216
Hsp92I GRCGYC 1 cut(s) 931
Hsp92II CATG 8 cut(s) 170, 191, 253, 512, 523, 651, 1007, 1144
HspAI GCGC 2 cut(s) 1467, 1477
KspAI GTTAAC 1 cut(s) 1387
Kzo9I GATC 8 cut(s) 576, 712, 763, 1102, 1202, 1254, 1442, 1453
LmnI GCTCC 2 cut(s) 697, 1507
Lsp1109I GCAGC 2 cut(s) 157, 397
LweI GCATC 5 cut(s) 77, 117, 436, 1067, 1502
MaeI CTAG 2 cut(s) 69, 660
MaeII ACGT 5 cut(s) 496, 581, 603, 793, 1216
MaeIII GTNAC 5 cut(s) 310, 398, 451, 470, 706
MalI GATC 8 cut(s) 578, 714, 765, 1104, 1204, 1256, 1444, 1455
MboI GATC 8 cut(s) 576, 712, 763, 1102, 1202, 1254, 1442, 1453
MboII GAAGA 7 cut(s) 47, 306, 316, 334, 647, 833, 925
MflI RGATCY 2 cut(s) 1102, 1202
MhlI GDGCHC 3 cut(s) 195, 414, 694
MlyI GAGTC 2 cut(s) 664, 1034
MmeI TCCRAC 2 cut(s) 798, 1420
MnlI CCTC 8 cut(s) 54, 98, 136, 255, 748, 982, 1442, 1459
MroXI GAANNNNTTC 1 cut(s) 183
MseI TTAA 7 cut(s) 101, 257, 656, 665, 918, 1322, 1386
MslI CAYNNNNRTG 2 cut(s) 165, 435
MspR9I CCNGG 1 cut(s) 1418
MvaI CCWGG 1 cut(s) 1418
MvnI CGCG 2 cut(s) 1467, 1477
MwoI GCNNNNNNNGC 6 cut(s) 391, 1087, 1422, 1490, 1499, 1508
NdeII GATC 8 cut(s) 576, 712, 763, 1102, 1202, 1254, 1442, 1453
NlaIII CATG 8 cut(s) 170, 191, 253, 512, 523, 651, 1007, 1144
NlaIV GGNNCC 1 cut(s) 57
NmeAIII GCCGAG 1 cut(s) 1012
NmuCI GTSAC 2 cut(s) 310, 470
NspI RCATGY 1 cut(s) 512
PceI AGGCCT 1 cut(s) 265
PciI ACATGT 1 cut(s) 508
PdmI GAANNNNTTC 1 cut(s) 183
PfeI GAWTC 1 cut(s) 26
PkrI GCNGC 3 cut(s) 172, 387, 1471
PleI GAGTC 2 cut(s) 664, 1033
PpsI GAGTC 2 cut(s) 664, 1033
Ppu21I YACGTR 2 cut(s) 497, 1217
PscI ACATGT 1 cut(s) 508
PsiI TTATAA 1 cut(s) 875
Psp1406I AACGTT 1 cut(s) 603
Psp6I CCWGG 1 cut(s) 1416
PspFI CCCAGC 2 cut(s) 368, 1511
PspGI CCWGG 1 cut(s) 1416
PspN4I GGNNCC 1 cut(s) 57
PspPI GGNCC 2 cut(s) 56, 651
PstNI CAGNNNCTG 2 cut(s) 391, 1189
PsuI RGATCY 2 cut(s) 1102, 1202
RsaI GTAC 6 cut(s) 73, 499, 513, 1002, 1139, 1410
RsaNI GTAC 6 cut(s) 72, 498, 512, 1001, 1138, 1409
RseI CAYNNNNRTG 2 cut(s) 165, 435
SaqAI TTAA 7 cut(s) 101, 257, 656, 665, 918, 1322, 1386
SatI GCNGC 3 cut(s) 171, 386, 1470
Sau3AI GATC 8 cut(s) 576, 712, 763, 1102, 1202, 1254, 1442, 1453
Sau96I GGNCC 2 cut(s) 56, 651
SchI GAGTC 2 cut(s) 664, 1034
ScrFI CCNGG 1 cut(s) 1418
SduI GDGCHC 3 cut(s) 195, 414, 694
SfaNI GCATC 5 cut(s) 77, 117, 436, 1067, 1502
SinI GGWCC 1 cut(s) 56
SmiMI CAYNNNNRTG 2 cut(s) 165, 435
SmlI CTYRAG 1 cut(s) 857
SmoI CTYRAG 1 cut(s) 857
SnaBI TACGTA 1 cut(s) 497
SpeI ACTAGT 1 cut(s) 68
SseBI AGGCCT 1 cut(s) 265
SsiI CCGC 4 cut(s) 282, 1414, 1421, 1470
SspI AATATT 1 cut(s) 115
SspMI CTAG 2 cut(s) 69, 660
StuI AGGCCT 1 cut(s) 265
StyD4I CCNGG 1 cut(s) 1416
TaaI ACNGT 2 cut(s) 950, 1302
TaiI ACGT 5 cut(s) 499, 584, 606, 796, 1219
TaqI TCGA 3 cut(s) 43, 208, 715
TatI WGTACW 4 cut(s) 71, 511, 1137, 1408
TauI GCSGC 1 cut(s) 1472
TfiI GAWTC 1 cut(s) 26
Tru1I TTAA 7 cut(s) 101, 257, 656, 665, 918, 1322, 1386
Tru9I TTAA 7 cut(s) 101, 257, 656, 665, 918, 1322, 1386
TscAI CASTG 2 cut(s) 732, 1171
TseFI GTSAC 2 cut(s) 310, 470
TseI GCWGC 2 cut(s) 170, 385
Tsp45I GTSAC 2 cut(s) 310, 470
TspGWI ACGGA 2 cut(s) 988, 1404
TspRI CASTG 2 cut(s) 732, 1171
VpaK11BI GGWCC 1 cut(s) 56
XapI RAATTY 2 cut(s) 226, 733
XceI RCATGY 1 cut(s) 512
XcmI CCANNNNNNNNNTGG 1 cut(s) 1221
XmiI GTMKAC 1 cut(s) 964
XmnI GAANNNNTTC 1 cut(s) 183
XspI CTAG 2 cut(s) 69, 660
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.