Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0000143

Physical Location & Seq

Genomic Coordinates Forward (+)

16405553 .. 16418496

Gene Structure 12944 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G007740.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1569 bp

ATGGATCCCAACGAGACCGCACAGCAGCTTCTTGCCCTTCATGCAGCTAGAATTGTGGGAAACATGGAGTCAGAGACTATGGTCTCTACCACAGATCAACGTGTTGAAGAAGAGCCACAGTACACACATATTGACCAGAATGAATTCTCACAGAGAAGGCACAAGAAGCAGGAGGAGGAGGAGATTGTCATATGTGAATGCAAGTATGATGAAAAGGATCCTGAAAGTGCATGTGGAGAAAGGTGCTTGAATGTGTTGACCAGCACGGAATGCACTCCTGGATATTGCCCTTGTGGTGTCTATTGTAAGAATCAGAGATTTCAGAAATGTGAATATGCCAAGACAAAATTGTTTAAAACAGAAGGCCGTGGTTGGGGTCTTTTAGCCAATGAGAACATTAAGGCAGGGAAGTTTATTATTGAATACTGTGGAGAAGTGATATCATGGAAGGAAGCAAAGAAAAGATCTCATGCTTATGAAGTTGAAGGTGGTTTAATAAAGTATCAGGGATGCATTTATTATTCTCTCAATGCCTCTGAGTCTATTGATGCCACTGTGAAGGGAAGCCTAGCAAGATTTATAAATCATTCTTGCCAACCAAATTGTGAGACAAGAAAGTGGAATGTGCTGGGGGAAATTAGGGTTGGAATATTTGCAAAACAAGATATATTAGCTGGAACTGAGTTGGCATATGACTACAATTTTGAATGGTATGGGGGTGTGAAGGTTCGCTGCCTCTGTGGTGCACCCAGCTGTTCAGGATTTCTTGGGGCAAAATCTCGTGGTTTTCAGGAGGATACATACTTGTGGGAAGATGACGATGAAAGGTATTCAGTTGAGAAAATTCCGCTTTATGATTCGGCAGAGGATGAGCCTTCTTCTATACTCTTCAAGACTGTCAAATCAAATTCTGAATTTGATGTAAAAGGGATGATGATCAATGTCAATGCTGATTCTGAACATCAGTTGATGTCCACTGCTCTAGTTGTCCAATCACTTGATTCAGATCCAATGGAGGGTGTAGTTATGGAGGTAAAAAGTGAAGCGAGTGAGGCGACGAAACTTTTTTCACGAGGTAATCAACCGGCTTTCTTAAAAAAGAATGCAATGATATCTCGAATCCGTAGCAATACTGCGTGTCGAAACTATCACATTGGATCAGGATCAATTTCAAACAAGAGATCGAAACAAGGTTCTAGTGGAAAGTTGAAACATTATGCACAAAAGCAAGTCGATGCCAAATCTGTAGCTTTGCTTTTAGCATCAAATGAGGCACAGGATGAAATTTTGAAACATGAGGAGATGAGAAGTGATGCTGCCACTCATCTTGAATCTTTATACAATGAGATACGACCTGCCATTGAAGAACATGAAAGGGACAGCCAAGACAGTGTAGCAACCAGTGTAGCTGAGAAGTGGATAGAAGCCTGCTGCTTGAAACTGAAGACGGAATTCGACCTTTATTCCTCTATTGTTAAACAAGTTGCTTGTACCCCTCGAAAGGCAAGTGGCCAAACCAAATCTGCCGATAACAACATAGAGAATGAAATCAAGTTGCTCCCAAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006325 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008213 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009791 GO:0009987 GO:0010224 GO:0010228 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0019538 GO:0022414 GO:0032259 GO:0032501 GO:0032502 GO:0033554 GO:0034641 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046483 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051276 GO:0051716 GO:0061458 GO:0071704 GO:0071840 GO:0090304 GO:1901360 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00310 map00310

Pfam Domains

Protein Families

SET

Protein Analysis

522

Amino Acids

58.67

Weight (kDa)

5.42

Isoelectric Point (pI)

56.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AWS	PF17907	73 - 110	1.5e-14	AWS domain
SET	PF00856	124 - 234	1.2e-25	SET domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000143)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76710 AT1G76710 AT1G76710 AT1G76710
fragaria_vesca	FvH4_1g20063 FvH4_2g15231 FvH4_3g04011 FvH4_3g28681 FvH4_4g01411 FvH4_4g10181 FvH4_4g15922 FvH4_4g16651 FvH4_4g16652 FvH4_5g13892 FvH4_5g13893 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g25511 FvH4_6g12551 FvH4_6g12552 FvH4_6g38841 FvH4_7g04391
malus_domestica	MD05G1031300.v1.1 MD05G1031400.v1.1 MD05G1031500.v1.1 MD08G1164400.v1.1 MD10G1032900.v1.1 MD10G1033000.v1.1 MD10G1033100.v1.1
prunus_persica	Prupe.3G240700_v2.0.a1 Prupe.7G144600_v2.0.a1 Prupe.8G038500_v2.0.a1 Prupe.8G038500_v2.0.a1
pyrus_communis	pycom05g02250 pycom05g02260 pycom05g02270 pycom05g02280 pycom08g14160 pycom10g02100 pycom10g02110 pycom10g02130
rosa_chinensis	RchiOBHm_Chr1g0329481 RchiOBHm_Chr1g0329491 RchiOBHm_Chr1g0341531 RchiOBHm_Chr3g0464811 RchiOBHm_Chr3g0494701 RchiOBHm_Chr3g0497501 RchiOBHm_Chr4g0385841 RchiOBHm_Chr5g0061181 RchiOBHm_Chr6g0263001 RchiOBHm_Chr7g0193111 RchiOBHm_Chr7g0206281 RchiOBHm_Chr7g0206311
rosa_laevigata	RLG00000018908 RLG00000028528 RLG00000028803 RLG00000029882 RLG00000029883 RLG00000030361
rosa_multiflora	Rmu_co8196328.1_g000001 Rmu_co8259135.1_g000001 Rmu_co8269185.1_g000001 Rmu_sc0000076.1_g000019 Rmu_sc0000311.1_g000007 Rmu_sc0000429.1_g000038 Rmu_sc0000429.1_g000039 Rmu_sc0000429.1_g000040 Rmu_sc0000511.1_g000005 Rmu_sc0000539.1_g000054 Rmu_sc0000566.1_g000039 Rmu_sc0000805.1_g000032 Rmu_sc0000870.1_g000073 Rmu_sc0000870.1_g000074 Rmu_sc0001010.1_g000018 Rmu_sc0001083.1_g000013 Rmu_sc0001114.1_g000011 Rmu_sc0001702.1_g000027 Rmu_sc0001779.1_g000012 Rmu_sc0002923.1_g000036 Rmu_sc0003242.1_g000011 Rmu_sc0003291.1_g000036 Rmu_sc0003393.1_g000012 Rmu_sc0003872.1_g000016 Rmu_sc0003872.1_g000017 Rmu_sc0003872.1_g000018 Rmu_sc0004084.1_g000020 Rmu_sc0004386.1_g000005 Rmu_sc0004622.1_g000005 Rmu_sc0004742.1_g000021 Rmu_sc0004755.1_g000020 Rmu_sc0004805.1_g000036 Rmu_sc0005065.1_g000006 Rmu_sc0005177.1_g000004 Rmu_sc0006373.1_g000003 Rmu_sc0006373.1_g000004 Rmu_sc0007121.1_g000002 Rmu_sc0007943.1_g000003 Rmu_sc0010368.1_g000006 Rmu_sc0010543.1_g000001 Rmu_sc0012591.1_g000006 Rmu_sc0013504.1_g000009 Rmu_sc0015025.1_g000001 Rmu_sc0016170.1_g000001 Rmu_sc0017156.1_g000001 Rmu_sc0026439.1_g000001
rosa_roxburghii	Rroxscaffold_175G00432280 Rroxscaffold_1G00030190 Rroxscaffold_1G00030880 Rroxscaffold_2G00090520 Rroxscaffold_3G00227940 Rroxscaffold_3G00233400 Rroxscaffold_3G00238500 Rroxscaffold_3G00251650 Rroxscaffold_4G00301570 Rroxscaffold_4G00321040 Rroxscaffold_5G00350880 Rroxscaffold_7G00184400
rosa_rugosa	Rorug01G0080800 Rorug01G0080900 Rorug01G0193900 Rorug02G0275900 Rorug02G0275900 Rorug02G0275900 Rorug02G0305400 Rorug02G0311800 Rorug02G0350400 Rorug02G0381300 Rorug03G0136700 Rorug03G0181900 Rorug03G0268000 Rorug04G0301600 Rorug05G0175100 Rorug05G0250700 Rorug05G0298200 Rorug05G0596000 Rorug06G0029500 Rorug07G0094300 Rorug07G0094300 Rorug07G0095400 Rorug07G0140100
rosa_samantha	Rh1AG099200 Rh1AG190500 Rh1BG078900 Rh1BG079000 Rh1BG079100 Rh1CG084600 Rh1CG084700 Rh1CG095300 Rh1CG175900 Rh1DG103300 Rh1DG150400 Rh2AG079300 Rh2AG272400 Rh2AG464800 Rh2AG507400 Rh2DG078300 Rh2DG078400 Rh3CG206900 Rh3CG295400 Rh3DG206800 Rh3DG356200 Rh4CG071500 Rh4CG179200 Rh4DG064700 Rh5CG362400 Rh7AG212300 Rh7AG226200 Rh7BG222200
rosa_wichuraiana	Rw0G009990 Rw0G011260 Rw0G011270 Rw0G012910 Rw0G013740 Rw1G007740 Rw1G013050 Rw1G014230 Rw2G014270 Rw3G012720 Rw3G028110 Rw4G006630 Rw4G015270 Rw4G016160 Rw4G031380 Rw5G011440 Rw5G029180 Rw5G048360 Rw5G048430 Rw5G048780 Rw6G005250 Rw6G006390 Rw7G002840 Rw7G014080 Rw7G019650 Rw7G032790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	581
Acc36I	ACCTGC	1 cut(s)	1363
AciI	CCGC	2 cut(s)	18, 848
AclWI	GGATC	6 cut(s)	12, 212, 225, 1001, 1165, 1171
AcoI	YGGCCR	1 cut(s)	1510
AcsI	RAATTY	6 cut(s)	143, 843, 907, 914, 1284, 1451
AcuI	CTGAAG	1 cut(s)	1463
AfaI	GTAC	2 cut(s)	122, 1492
AfiI	CCNNNNNNNGG	3 cut(s)	373, 1016, 1501
AflIII	ACRYGT	1 cut(s)	100
AjnI	CCWGG	1 cut(s)	277
AjuI	GAANNNNNNNTTGG	2 cut(s)	627, 659
AluBI	AGCT	6 cut(s)	28, 47, 674, 753, 1250, 1409
AluI	AGCT	6 cut(s)	28, 47, 674, 753, 1250, 1409
Alw21I	GWGCWC	1 cut(s)	748
Alw26I	GTCTC	4 cut(s)	8, 68, 88, 602
Alw44I	GTGCAC	1 cut(s)	744
AlwI	GGATC	6 cut(s)	12, 212, 225, 1001, 1165, 1171
AoxI	GGCC	2 cut(s)	364, 1510
ApaLI	GTGCAC	1 cut(s)	744
ApeKI	GCWGC	5 cut(s)	25, 44, 732, 1316, 1431
ApoI	RAATTY	6 cut(s)	143, 843, 907, 914, 1284, 1451
ArsI	GACNNNNNNTTYG	2 cut(s)	686, 718
Asp700I	GAANNNNTTC	1 cut(s)	143
BaeGI	GKGCMC	1 cut(s)	748
BalI	TGGCCA	1 cut(s)	1512
BamHI	GGATCC	2 cut(s)	4, 217
BauI	CACGAG	2 cut(s)	780, 1071
BbsI	GAAGAC	1 cut(s)	1451
Bbv12I	GWGCWC	1 cut(s)	748
BbvI	GCAGC	5 cut(s)	37, 56, 719, 1303, 1418
BceAI	ACGGC	1 cut(s)	351
BciT130I	CCWGG	1 cut(s)	279
BciVI	GTATCC	1 cut(s)	790
BclI	TGATCA	1 cut(s)	936
BcoDI	GTCTC	4 cut(s)	8, 68, 88, 602
BfaI	CTAG	4 cut(s)	48, 569, 983, 1197
BfmI	CTRYAG	1 cut(s)	1245
BfuAI	ACCTGC	1 cut(s)	1363
BfuI	GTATCC	1 cut(s)	790
BglII	AGATCT	1 cut(s)	464
BisI	GCNGC	5 cut(s)	26, 45, 733, 1317, 1432
BlsI	GCNGC	5 cut(s)	27, 46, 734, 1318, 1433
Bme1390I	CCNGG	1 cut(s)	279
BmiI	GGNNCC	2 cut(s)	6, 219
BmrFI	CCNGG	1 cut(s)	279
BmsI	GCATC	5 cut(s)	500, 538, 1225, 1271, 1303
BoxI	GACNNNNGTC	1 cut(s)	80
BpiI	GAAGAC	1 cut(s)	1451
BsaBI	GATNNNNATC	3 cut(s)	935, 1005, 1162
BsaI	GGTCTC	2 cut(s)	8, 88
BsaJI	CCNNGG	1 cut(s)	367
Bsc4I	CCNNNNNNNGG	3 cut(s)	373, 1016, 1501
Bse118I	RCCGGY	1 cut(s)	1084
Bse1I	ACTGG	1 cut(s)	1401
Bse3DI	GCAATG	1 cut(s)	1113
Bse8I	GATNNNNATC	3 cut(s)	935, 1005, 1162
BseBI	CCWGG	1 cut(s)	279
BseDI	CCNNGG	1 cut(s)	367
BseGI	GGATG	4 cut(s)	515, 874, 936, 1285
BseJI	GATNNNNATC	3 cut(s)	935, 1005, 1162
BseLI	CCNNNNNNNGG	3 cut(s)	373, 1016, 1501
BseMI	GCAATG	1 cut(s)	1113
BseMII	CTCAG	3 cut(s)	528, 672, 1401
BseNI	ACTGG	1 cut(s)	1401
BseRI	GAGGAG	4 cut(s)	188, 191, 194, 1313
BseSI	GKGCMC	1 cut(s)	748
BseXI	GCAGC	5 cut(s)	37, 56, 719, 1303, 1418
BseYI	CCCAGC	2 cut(s)	628, 749
BshFI	GGCC	2 cut(s)	366, 1512
BsiHKAI	GWGCWC	1 cut(s)	748
BsiSI	CCGG	1 cut(s)	1085
BslFI	GGGAC	1 cut(s)	1391
BslI	CCNNNNNNNGG	3 cut(s)	373, 1016, 1501
BsmAI	GTCTC	4 cut(s)	8, 68, 88, 602
BsmFI	GGGAC	1 cut(s)	1391
BsmI	GAATGC	3 cut(s)	203, 275, 1108
BsnI	GGCC	2 cut(s)	366, 1512
Bso31I	GGTCTC	2 cut(s)	8, 88
Bsp1286I	GDGCHC	1 cut(s)	748
Bsp143I	GATC	9 cut(s)	4, 94, 217, 464, 936, 1006, 1157, 1163, 1181
BspACI	CCGC	2 cut(s)	18, 848
BspANI	GGCC	2 cut(s)	366, 1512
BspCNI	CTCAG	3 cut(s)	529, 673, 1402
BspLI	GGNNCC	2 cut(s)	6, 219
BspMI	ACCTGC	1 cut(s)	1363
BspPI	GGATC	6 cut(s)	12, 212, 225, 1001, 1165, 1171
BspQI	GCTCTTC	1 cut(s)	105
BspTNI	GGTCTC	2 cut(s)	8, 88
BsrDI	GCAATG	1 cut(s)	1113
BsrFI	RCCGGY	1 cut(s)	1084
BsrI	ACTGG	1 cut(s)	1401
BssAI	RCCGGY	1 cut(s)	1084
BssECI	CCNNGG	1 cut(s)	367
BssMI	GATC	9 cut(s)	4, 94, 217, 464, 936, 1006, 1157, 1163, 1181
BssSI	CACGAG	2 cut(s)	780, 1071
Bst2BI	CACGAG	2 cut(s)	780, 1071
Bst2UI	CCWGG	1 cut(s)	279
Bst4CI	ACNGT	5 cut(s)	120, 428, 556, 898, 1391
Bst6I	CTCTTC	2 cut(s)	105, 893
BstAPI	GCANNNNNTGC	1 cut(s)	270
BstC8I	GCNNGC	1 cut(s)	1429
BstDEI	CTNAG	3 cut(s)	537, 681, 1410
BstDSI	CCRYGG	1 cut(s)	367
BstF5I	GGATG	4 cut(s)	515, 874, 936, 1285
BstKTI	GATC	9 cut(s)	7, 97, 220, 467, 939, 1009, 1160, 1166, 1184
BstMAI	GTCTC	4 cut(s)	8, 68, 88, 602
BstMBI	GATC	9 cut(s)	4, 94, 217, 464, 936, 1006, 1157, 1163, 1181
BstMWI	GCNNNNNNNGC	4 cut(s)	41, 166, 270, 1052
BstNI	CCWGG	1 cut(s)	279
BstNSI	RCATGY	1 cut(s)	234
BstPAI	GACNNNNGTC	1 cut(s)	80
BstSCI	CCNGG	1 cut(s)	277
BstSFI	CTRYAG	1 cut(s)	1245
BstSLI	GKGCMC	1 cut(s)	748
BstV1I	GCAGC	5 cut(s)	37, 56, 719, 1303, 1418
BstV2I	GAAGAC	1 cut(s)	1451
BstX2I	RGATCY	4 cut(s)	4, 217, 464, 1006
BstYI	RGATCY	4 cut(s)	4, 217, 464, 1006
BsuI	GTATCC	1 cut(s)	790
BsuRI	GGCC	2 cut(s)	366, 1512
BtgI	CCRYGG	1 cut(s)	367
BtsCI	GGATG	4 cut(s)	515, 874, 936, 1285
BtsI	GCAGTG	1 cut(s)	975
BtsIMutI	CAGTG	4 cut(s)	552, 975, 1396, 1408
BveI	ACCTGC	1 cut(s)	1363
Cac8I	GCNNGC	1 cut(s)	1429
Cfr10I	RCCGGY	1 cut(s)	1084
Csp6I	GTAC	2 cut(s)	121, 1491
CspCI	CAANNNNNGTGG	2 cut(s)	1309, 1344
CviAII	CATG	7 cut(s)	41, 64, 231, 444, 470, 1295, 1370
CviQI	GTAC	2 cut(s)	121, 1491
DdeI	CTNAG	3 cut(s)	537, 681, 1410
DpnI	GATC	9 cut(s)	6, 96, 219, 466, 938, 1008, 1159, 1165, 1183
DpnII	GATC	9 cut(s)	4, 94, 217, 464, 936, 1006, 1157, 1163, 1181
DraI	TTTAAA	1 cut(s)	355
EaeI	YGGCCR	1 cut(s)	1510
Eam1104I	CTCTTC	2 cut(s)	105, 893
EarI	CTCTTC	2 cut(s)	105, 893
Eco31I	GGTCTC	2 cut(s)	8, 88
Eco32I	GATATC	2 cut(s)	441, 1113
Eco57I	CTGAAG	1 cut(s)	1463
EcoRI	GAATTC	2 cut(s)	143, 1451
EcoRII	CCWGG	1 cut(s)	277
EcoRV	GATATC	2 cut(s)	441, 1113
EcoT22I	ATGCAT	1 cut(s)	515
FaeI	CATG	7 cut(s)	44, 67, 234, 447, 473, 1298, 1373
FaqI	GGGAC	1 cut(s)	1391
FatI	CATG	7 cut(s)	40, 63, 230, 443, 469, 1294, 1369
FauNDI	CATATG	2 cut(s)	191, 691
FbaI	TGATCA	1 cut(s)	936
Fnu4HI	GCNGC	5 cut(s)	26, 45, 733, 1317, 1432
FokI	GGATG	4 cut(s)	522, 881, 943, 1292
Fsp4HI	GCNGC	5 cut(s)	26, 45, 733, 1317, 1432
FspBI	CTAG	4 cut(s)	48, 569, 983, 1197
GluI	GCNGC	5 cut(s)	26, 45, 733, 1317, 1432
GsaI	CCCAGC	2 cut(s)	632, 753
HaeIII	GGCC	2 cut(s)	366, 1512
HapII	CCGG	1 cut(s)	1085
Hin1II	CATG	7 cut(s)	44, 67, 234, 447, 473, 1298, 1373
HincII	GTYRAC	1 cut(s)	258
HindII	GTYRAC	1 cut(s)	258
HinfI	GANTC	8 cut(s)	68, 310, 539, 857, 953, 1001, 1119, 1331
HpaII	CCGG	1 cut(s)	1085
Hpy166II	GTNNAC	4 cut(s)	123, 258, 746, 975
Hpy188I	TCNGA	7 cut(s)	73, 315, 324, 538, 913, 958, 1006
Hpy188III	TCNNGA	8 cut(s)	221, 759, 791, 892, 1071, 1116, 1161, 1328
Hpy8I	GTNNAC	4 cut(s)	123, 258, 746, 975
Hpy99I	CGWCG	1 cut(s)	1060
HpyAV	CCTTC	8 cut(s)	47, 150, 356, 442, 479, 553, 718, 885
HpyCH4III	ACNGT	5 cut(s)	120, 428, 556, 898, 1391
HpyCH4IV	ACGT	1 cut(s)	100
HpyCH4V	TGCA	9 cut(s)	44, 201, 230, 273, 513, 656, 746, 1106, 1220
HpyF10VI	GCNNNNNNNGC	4 cut(s)	41, 166, 270, 1052
HpyF3I	CTNAG	3 cut(s)	537, 681, 1410
HpySE526I	ACGT	1 cut(s)	100
Hsp92II	CATG	7 cut(s)	44, 67, 234, 447, 473, 1298, 1373
Ksp22I	TGATCA	1 cut(s)	936
Kzo9I	GATC	9 cut(s)	4, 94, 217, 464, 936, 1006, 1157, 1163, 1181
LguI	GCTCTTC	1 cut(s)	105
LmnI	GCTCC	1 cut(s)	1563
Lsp1109I	GCAGC	5 cut(s)	37, 56, 719, 1303, 1418
LweI	GCATC	5 cut(s)	500, 538, 1225, 1271, 1303
MaeI	CTAG	4 cut(s)	48, 569, 983, 1197
MaeII	ACGT	1 cut(s)	100
MalI	GATC	9 cut(s)	6, 96, 219, 466, 938, 1008, 1159, 1165, 1183
MboI	GATC	9 cut(s)	4, 94, 217, 464, 936, 1006, 1157, 1163, 1181
MboII	GAAGA	7 cut(s)	119, 122, 824, 870, 880, 1376, 1456
MflI	RGATCY	4 cut(s)	4, 217, 464, 1006
MhlI	GDGCHC	1 cut(s)	748
MlsI	TGGCCA	1 cut(s)	1512
MluNI	TGGCCA	1 cut(s)	1512
MlyI	GAGTC	2 cut(s)	77, 548
MmeI	TCCRAC	1 cut(s)	625
Mox20I	TGGCCA	1 cut(s)	1512
Mph1103I	ATGCAT	1 cut(s)	515
MroXI	GAANNNNTTC	1 cut(s)	143
MscI	TGGCCA	1 cut(s)	1512
MseI	TTAA	5 cut(s)	354, 399, 494, 1094, 1476
MslI	CAYNNNNRTG	2 cut(s)	474, 805
Msp20I	TGGCCA	1 cut(s)	1512
MspA1I	CMGCKG	1 cut(s)	753
MspI	CCGG	1 cut(s)	1085
MspR9I	CCNGG	1 cut(s)	279
Mva1269I	GAATGC	3 cut(s)	203, 275, 1108
MvaI	CCWGG	1 cut(s)	279
MwoI	GCNNNNNNNGC	4 cut(s)	41, 166, 270, 1052
NdeI	CATATG	2 cut(s)	191, 691
NdeII	GATC	9 cut(s)	4, 94, 217, 464, 936, 1006, 1157, 1163, 1181
NlaIII	CATG	7 cut(s)	44, 67, 234, 447, 473, 1298, 1373
NlaIV	GGNNCC	2 cut(s)	6, 219
NsiI	ATGCAT	1 cut(s)	515
NspI	RCATGY	1 cut(s)	234
PciSI	GCTCTTC	1 cut(s)	105
PctI	GAATGC	3 cut(s)	203, 275, 1108
PdmI	GAANNNNTTC	1 cut(s)	143
PfeI	GAWTC	6 cut(s)	310, 857, 953, 1001, 1119, 1331
PfoI	TCCNGGA	1 cut(s)	277
PkrI	GCNGC	5 cut(s)	27, 46, 734, 1318, 1433
PleI	GAGTC	2 cut(s)	76, 547
PpsI	GAGTC	2 cut(s)	76, 547
PshAI	GACNNNNGTC	1 cut(s)	80
PsiI	TTATAA	1 cut(s)	581
Psp6I	CCWGG	1 cut(s)	277
PspFI	CCCAGC	2 cut(s)	628, 749
PspGI	CCWGG	1 cut(s)	277
PspN4I	GGNNCC	2 cut(s)	6, 219
PsuI	RGATCY	4 cut(s)	4, 217, 464, 1006
PvuII	CAGCTG	1 cut(s)	753
RsaI	GTAC	2 cut(s)	122, 1492
RsaNI	GTAC	2 cut(s)	121, 1491
RseI	CAYNNNNRTG	2 cut(s)	474, 805
SapI	GCTCTTC	1 cut(s)	105
SaqAI	TTAA	5 cut(s)	354, 399, 494, 1094, 1476
SatI	GCNGC	5 cut(s)	26, 45, 733, 1317, 1432
Sau3AI	GATC	9 cut(s)	4, 94, 217, 464, 936, 1006, 1157, 1163, 1181
SchI	GAGTC	2 cut(s)	77, 548
ScrFI	CCNGG	1 cut(s)	279
SduI	GDGCHC	1 cut(s)	748
SfaNI	GCATC	5 cut(s)	500, 538, 1225, 1271, 1303
SfcI	CTRYAG	1 cut(s)	1245
SmiMI	CAYNNNNRTG	2 cut(s)	474, 805
SsiI	CCGC	2 cut(s)	18, 848
SspI	AATATT	1 cut(s)	651
SspMI	CTAG	4 cut(s)	48, 569, 983, 1197
StyD4I	CCNGG	1 cut(s)	277
TaaI	ACNGT	5 cut(s)	120, 428, 556, 898, 1391
TaiI	ACGT	1 cut(s)	103
TaqI	TCGA	6 cut(s)	1117, 1141, 1184, 1233, 1455, 1498
TatI	WGTACW	1 cut(s)	120
TfiI	GAWTC	6 cut(s)	310, 857, 953, 1001, 1119, 1331
Tru1I	TTAA	5 cut(s)	354, 399, 494, 1094, 1476
Tru9I	TTAA	5 cut(s)	354, 399, 494, 1094, 1476
TscAI	CASTG	4 cut(s)	559, 982, 1396, 1408
TseI	GCWGC	5 cut(s)	25, 44, 732, 1316, 1431
TspDTI	ATGAA	8 cut(s)	29, 156, 225, 492, 837, 1296, 1386, 1560
TspGWI	ACGGA	3 cut(s)	281, 1112, 1463
TspRI	CASTG	4 cut(s)	559, 982, 1396, 1408
VneI	GTGCAC	1 cut(s)	744
XapI	RAATTY	6 cut(s)	143, 843, 907, 914, 1284, 1451
XceI	RCATGY	1 cut(s)	234
XmnI	GAANNNNTTC	1 cut(s)	143
XspI	CTAG	4 cut(s)	48, 569, 983, 1197
Zsp2I	ATGCAT	1 cut(s)	515

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.