FvH4_5g20623

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000143
Physical Location & Seq
Forward (+)
12248773 .. 12254103
5331 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g20623.t4

Sequence Viewer

Length: 2637 bp
ATGGATCATGTGGCTACATCAACTCCCAGTGATGTAGAAAATGAATATACAAGGGATAAAACTAGTCAATTCACAACGACTCAGACATTCGAGAGCAAAGAAGAGCTTATAAAGTGGGCCAAAGAAGTTGGGAGGTCGAATGATATTACTGTTGTCGTGTTAAGATCTGACAAGAAGAAACCTAGAGTTACATTGGGTTGTGAGAAGAGCGGAAAATATGATACCCGATATACTCGAGAAAAACCGATGACGGATAAGAAGGGCCGTCGAAATACCGGAACTAAGAAGAGTGATTGTCCTTTCCGGTTAACGGGCAAGAAGCTTCCCGCTGGTGATGAGTGGGAGCTGACGGTAGTTGAAGGAAAGCATAACCATGAAGCAAAGGACACTATTAGGAAGCAGGGACATTCATTTCAGGGTAGATTATCTCAAGAGGAAAAGTCATTGGTGAAGGATTGGCGTGAAACAGGGAAGCAGCCTAAGGAGATATTAGAAGATCTAAAAAAGAGGGACACGCACAACAAATCCACAGCTAGGACGATACTCAATGAATGTCAACGTTTGGAGCGTTTGGAGGATAAAAGATGTCAATTGCAACAATTAGCGAGTCGCCCAGAGAAGCACAATTTCATCGAGAAGCACAGGAGGACTAGTCCAAAGATGGACACAGCCTCGGACTTGTTTCTGACACACCGCATTAGCTTGGAGTTGTTACTTGCATTTCCAACTGTTTTGGAAATACACTGGCAGGAGCGTCCTCCTAGTTCGACCAGGTTTATCATTCTCGGAATTACGTCAACTGATACTATTTTTTTTGTCGCTTTTGCTATCACTTCAAGAGATGGAAGTAGTTATGAATGGGCCTTAAGCTCATTGCGAGGTGTAATGAATGGTTACGGTATTGCTATGCCTGATGTTGTGATTCTGGAAACATGGGCAGATACGATTCAGCTGGCTCCCATGAAAAAAGTCGTTAACGACGTCTTCAGCACGGCTAAAGTTTTGTTATCTATGGCTATCGTTCGTGATTGGCTACATGCTATCATTTATGGTCCGCTAGATGATTATTACAGTCCTTACACCCTGGTGATACCTAAGTTGAATTATGAGGAGCGGATTTCCTTTAGAAAGAAGTGGAAGTTATTGGTAGAATCCCCAACTGAAGCCGATTTGGAACAACGTATAATGCAGCTACGCACCGAGTTTTGTAAGTATCCGAAGATACTTGATTATGTTACAGACACTTTGTTAGAGCCATATAAGGAAATGTTCGTTGCGGCATGGACAGATAAAGTTATGCACTTAGGCTGGAGCCAGGGGACGTGGGGGTGCCGCTACAGTTTTAATCTGGCTTCTATATTATCGAATCGGTTAGCAGGGGTAGAGCAGAAAGTACCAACTGACAAATTTTGGAAAGATTTACAAGGGTGGATTGAGAATGACAACGTGAATGTTAAACAATCGTTGAAAAGTGAGAACTACGATGGATATGGGTTCCCAGAGTTGAAGGGACTTTATGGAACCGTTTCCCGTCGCGCATTAACACTGCTCCGTGAGCAGACCGATGTAGCCCGTCGGAGAGATGTTGACAATGGTGAGAACTGTCGTTGTGCCATAAGAAGTACCCATGGCTTACCTTGTGCGCATCAAATTGCTAAATACAGGAGAGAAGGTCGACCTATTCCACCAGAATGCATCAATTCTCATTGGAGGACACTTCAGTTGAAACCGTTAAGAGAGACCGGAGAGCCCAGTGTGGAAGGGAGGGTTAAGCGACGAAAGCTAAGTGACAAGAAGAATACAGATACTCATTTTGTTCTACCCTTGCCTGATGACATTGTGGAATCTGAGCGTAATTCACCCAATGCTGGTCCTTCTATAGTGCCCTCAACACAAGACAGGCAGCCAGATGATGAGGTGTCTGACATCCAATCAACAAATAAGCTACTTGAGCTTGTAAATGTAAGTCCACTTGTATTGCGGCCATACGTCCTTGATGTAAAGGACGTTCCAAGAGACGGCCATTGCGGTTTTAGCACTATTGCATCATTGTTGGGTATCACCGATGAGGATGGACGGCCAGGATGGGTGAAAGTACGAGAAGACTTACGAAAGGAGCTGAAGTTTCACCGAGATCACTATGCACATCTTTTTGGGTCAAAACATGAGGTTGATGATCTACTTCATAGACTGGACTACTCCCTAATACCTTGTCCAGAAAAGGAGCACTGGATGATTATGCCAGAGATGGGTCATATTATAGCTTCTTGTTATGGTGTTGTACTCATTCTTCTGTCTTCTGTCCAAAACCAATGCTTCACATTCTTCCCGCTCCAGACTGCGCCGACATTTGTATCATTACCTGCAGAGATTGCCATTGGATTTTGTGATGAACATTTTGTGCAGGTCCTATTCAAAGAGAACCATAGGTATCCTCATCCCATGCCTCCTCCAGCTGCCCTTCTGACCAAAAGAGAACCCTCAGATTTTGATAGACATCAGCAACAACGTTCCAGAGAATGGGCCACTCGATACGATGCTCGCATGAAGCAATTCAGCTCCTACTTACAGCCTATGGTCGTGTCACATGAGAATCCAATCGTTCTGGATACTGTTTCCAGTATGGACATTTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE

Protein Analysis

879

Amino Acids

101.26

Weight (kDa)

8.3

Isoelectric Point (pI)

42.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AFT PF08731 30 - 126 7.6e-08 Transcription factor AFT
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000143)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G76710 AT1G76710 AT1G76710 AT1G76710
fragaria_vesca FvH4_1g20063 FvH4_2g15231 FvH4_3g04011 FvH4_3g28681 FvH4_4g01411 FvH4_4g10181 FvH4_4g15922 FvH4_4g16651 FvH4_4g16652 FvH4_5g13892 FvH4_5g13893 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g25511 FvH4_6g12551 FvH4_6g12552 FvH4_6g38841 FvH4_7g04391
malus_domestica MD05G1031300.v1.1 MD05G1031400.v1.1 MD05G1031500.v1.1 MD08G1164400.v1.1 MD10G1032900.v1.1 MD10G1033000.v1.1 MD10G1033100.v1.1
prunus_persica Prupe.3G240700_v2.0.a1 Prupe.7G144600_v2.0.a1 Prupe.8G038500_v2.0.a1 Prupe.8G038500_v2.0.a1
pyrus_communis pycom05g02250 pycom05g02260 pycom05g02270 pycom05g02280 pycom08g14160 pycom10g02100 pycom10g02110 pycom10g02130
rosa_chinensis RchiOBHm_Chr1g0329481 RchiOBHm_Chr1g0329491 RchiOBHm_Chr1g0341531 RchiOBHm_Chr3g0464811 RchiOBHm_Chr3g0494701 RchiOBHm_Chr3g0497501 RchiOBHm_Chr4g0385841 RchiOBHm_Chr5g0061181 RchiOBHm_Chr6g0263001 RchiOBHm_Chr7g0193111 RchiOBHm_Chr7g0206281 RchiOBHm_Chr7g0206311
rosa_laevigata RLG00000018908 RLG00000028528 RLG00000028803 RLG00000029882 RLG00000029883 RLG00000030361
rosa_multiflora Rmu_co8196328.1_g000001 Rmu_co8259135.1_g000001 Rmu_co8269185.1_g000001 Rmu_sc0000076.1_g000019 Rmu_sc0000311.1_g000007 Rmu_sc0000429.1_g000038 Rmu_sc0000429.1_g000039 Rmu_sc0000429.1_g000040 Rmu_sc0000511.1_g000005 Rmu_sc0000539.1_g000054 Rmu_sc0000566.1_g000039 Rmu_sc0000805.1_g000032 Rmu_sc0000870.1_g000073 Rmu_sc0000870.1_g000074 Rmu_sc0001010.1_g000018 Rmu_sc0001083.1_g000013 Rmu_sc0001114.1_g000011 Rmu_sc0001702.1_g000027 Rmu_sc0001779.1_g000012 Rmu_sc0002923.1_g000036 Rmu_sc0003242.1_g000011 Rmu_sc0003291.1_g000036 Rmu_sc0003393.1_g000012 Rmu_sc0003872.1_g000016 Rmu_sc0003872.1_g000017 Rmu_sc0003872.1_g000018 Rmu_sc0004084.1_g000020 Rmu_sc0004386.1_g000005 Rmu_sc0004622.1_g000005 Rmu_sc0004742.1_g000021 Rmu_sc0004755.1_g000020 Rmu_sc0004805.1_g000036 Rmu_sc0005065.1_g000006 Rmu_sc0005177.1_g000004 Rmu_sc0006373.1_g000003 Rmu_sc0006373.1_g000004 Rmu_sc0007121.1_g000002 Rmu_sc0007943.1_g000003 Rmu_sc0010368.1_g000006 Rmu_sc0010543.1_g000001 Rmu_sc0012591.1_g000006 Rmu_sc0013504.1_g000009 Rmu_sc0015025.1_g000001 Rmu_sc0016170.1_g000001 Rmu_sc0017156.1_g000001 Rmu_sc0026439.1_g000001
rosa_roxburghii Rroxscaffold_175G00432280 Rroxscaffold_1G00030190 Rroxscaffold_1G00030880 Rroxscaffold_2G00090520 Rroxscaffold_3G00227940 Rroxscaffold_3G00233400 Rroxscaffold_3G00238500 Rroxscaffold_3G00251650 Rroxscaffold_4G00301570 Rroxscaffold_4G00321040 Rroxscaffold_5G00350880 Rroxscaffold_7G00184400
rosa_rugosa Rorug01G0080800 Rorug01G0080900 Rorug01G0193900 Rorug02G0275900 Rorug02G0275900 Rorug02G0275900 Rorug02G0305400 Rorug02G0311800 Rorug02G0350400 Rorug02G0381300 Rorug03G0136700 Rorug03G0181900 Rorug03G0268000 Rorug04G0301600 Rorug05G0175100 Rorug05G0250700 Rorug05G0298200 Rorug05G0596000 Rorug06G0029500 Rorug07G0094300 Rorug07G0094300 Rorug07G0095400 Rorug07G0140100
rosa_samantha Rh1AG099200 Rh1AG190500 Rh1BG078900 Rh1BG079000 Rh1BG079100 Rh1CG084600 Rh1CG084700 Rh1CG095300 Rh1CG175900 Rh1DG103300 Rh1DG150400 Rh2AG079300 Rh2AG272400 Rh2AG464800 Rh2AG507400 Rh2DG078300 Rh2DG078400 Rh3CG206900 Rh3CG295400 Rh3DG206800 Rh3DG356200 Rh4CG071500 Rh4CG179200 Rh4DG064700 Rh5CG362400 Rh7AG212300 Rh7AG226200 Rh7BG222200
rosa_wichuraiana Rw0G009990 Rw0G011260 Rw0G011270 Rw0G012910 Rw0G013740 Rw1G007740 Rw1G013050 Rw1G014230 Rw2G014270 Rw3G012720 Rw3G028110 Rw4G006630 Rw4G015270 Rw4G016160 Rw4G031380 Rw5G011440 Rw5G029180 Rw5G048360 Rw5G048430 Rw5G048780 Rw6G005250 Rw6G006390 Rw7G002840 Rw7G014080 Rw7G019650 Rw7G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 110
AatII GACGTC 1 cut(s) 984
Acc16I TGCGCA 1 cut(s) 1644
Acc36I ACCTGC 2 cut(s) 2371, 2395
AccB1I GGYRCC 1 cut(s) 1329
AccB7I CCANNNNNTGG 1 cut(s) 2520
AccBSI CCGCTC 3 cut(s) 210, 1114, 2332
AccI GTMKAC 1 cut(s) 1675
AccII CGCG 1 cut(s) 1536
AclI AACGTT 2 cut(s) 559, 2509
AclWI GGATC 1 cut(s) 12
AcoI YGGCCR 3 cut(s) 1982, 2020, 2078
AcsI RAATTY 1 cut(s) 1406
AcuI CTGAAG 4 cut(s) 970, 1182, 1703, 2141
AcyI GRCGYC 1 cut(s) 981
AfaI GTAC 4 cut(s) 1395, 1624, 2097, 2283
AfiI CCNNNNNNNGG 6 cut(s) 310, 534, 1868, 2018, 2249, 2520
AflII CTTAAG 1 cut(s) 865
AgsI TTSAA 7 cut(s) 359, 837, 1102, 1468, 1507, 1726, 2416
AhlI ACTAGT 2 cut(s) 62, 650
AjiI CACGTC 1 cut(s) 1323
AjnI CCWGG 4 cut(s) 770, 1083, 1314, 2080
AleI CACNNNNGTG 1 cut(s) 1085
Alw21I GWGCWC 1 cut(s) 2229
Alw26I GTCTC 2 cut(s) 1733, 2010
AlwI GGATC 1 cut(s) 12
Ama87I CYCGRG 1 cut(s) 234
AoxI GGCC 7 cut(s) 117, 262, 861, 1982, 2020, 2078, 2523
ApeKI GCWGC 4 cut(s) 475, 1189, 1903, 2456
ApoI RAATTY 1 cut(s) 1406
Asp700I GAANNNNTTC 2 cut(s) 1525, 2552
AspLEI GCGC 3 cut(s) 1538, 1645, 2344
AspS9I GGNCC 7 cut(s) 117, 262, 861, 1052, 1871, 2407, 2523
AsuHPI GGTGA 8 cut(s) 344, 460, 1099, 1607, 1851, 2053, 2101, 2120
AvaI CYCGRG 1 cut(s) 234
AvaII GGWCC 3 cut(s) 1052, 1871, 2407
AxyI CCTNAGG 1 cut(s) 480
BaeGI GKGCMC 1 cut(s) 1887
BaeI ACNNNNGTAYC 4 cut(s) 1082, 1115, 2337, 2370
BanI GGYRCC 1 cut(s) 1329
BanII GRGCYC 1 cut(s) 1752
BarI GAAGNNNNNNTAC 2 cut(s) 2274, 2306
BbsI GAAGAC 3 cut(s) 976, 2109, 2289
Bbv12I GWGCWC 1 cut(s) 2229
BbvI GCAGC 4 cut(s) 487, 1201, 1915, 2443
BccI CCATC 6 cut(s) 655, 836, 1478, 2066, 2079, 2242
BceAI ACGGC 4 cut(s) 249, 1008, 2035, 2093
BciT130I CCWGG 4 cut(s) 772, 1085, 1316, 2082
BciVI GTATCC 3 cut(s) 1224, 2442, 2602
BcoDI GTCTC 2 cut(s) 1733, 2010
BcuI ACTAGT 2 cut(s) 62, 650
BfaI CTAG 6 cut(s) 63, 183, 534, 651, 762, 1058
BfmI CTRYAG 3 cut(s) 1336, 1878, 2364
BfrI CTTAAG 1 cut(s) 865
BfuAI ACCTGC 2 cut(s) 2371, 2395
BfuI GTATCC 3 cut(s) 1224, 2442, 2602
BglII AGATCT 2 cut(s) 164, 496
BisI GCNGC 7 cut(s) 476, 1190, 1278, 1333, 1904, 1982, 2457
BlsI GCNGC 7 cut(s) 477, 1191, 1279, 1334, 1905, 1983, 2458
Bme1390I CCNGG 4 cut(s) 772, 1085, 1316, 2082
Bme18I GGWCC 3 cut(s) 1052, 1871, 2407
BmeT110I CYCGRG 1 cut(s) 234
BmgBI CACGTC 1 cut(s) 1323
BmgT120I GGNCC 7 cut(s) 117, 262, 861, 1052, 1871, 2407, 2523
BmiI GGNNCC 5 cut(s) 957, 1313, 1331, 1496, 1522
BmrFI CCNGG 4 cut(s) 772, 1085, 1316, 2082
BmrI ACTGGG 2 cut(s) 21, 1746
BmsI GCATC 4 cut(s) 1654, 1704, 2054, 2527
BmuI ACTGGG 2 cut(s) 21, 1746
BpiI GAAGAC 3 cut(s) 976, 2109, 2289
BpmI CTGGAG 3 cut(s) 1330, 2318, 2436
BpuEI CTTGAG 2 cut(s) 414, 1970
BsaBI GATNNNNATC 1 cut(s) 2496
BsaHI GRCGYC 1 cut(s) 981
BsaI GGTCTC 1 cut(s) 1733
BsaJI CCNNGG 4 cut(s) 672, 1083, 1315, 1627
BsaWI WCCGGW 3 cut(s) 275, 303, 1742
BsaXI ACNNNNNCTCC 8 cut(s) 7, 37, 637, 667, 1657, 1687, 2108, 2138
Bsc4I CCNNNNNNNGG 6 cut(s) 310, 534, 1868, 2018, 2249, 2520
Bse1I ACTGG 6 cut(s) 27, 749, 1752, 2196, 2234, 2619
Bse21I CCTNAGG 1 cut(s) 480
Bse3DI GCAATG 2 cut(s) 872, 2023
Bse8I GATNNNNATC 1 cut(s) 2496
BseBI CCWGG 4 cut(s) 772, 1085, 1316, 2082
BseDI CCNNGG 4 cut(s) 672, 1083, 1315, 1627
BseGI GGATG 5 cut(s) 1926, 2077, 2090, 2238, 2437
BseJI GATNNNNATC 1 cut(s) 2496
BseLI CCNNNNNNNGG 6 cut(s) 310, 534, 1868, 2018, 2249, 2520
BseMI GCAATG 2 cut(s) 872, 2023
BseMII CTCAG 3 cut(s) 95, 1839, 2496
BseNI ACTGG 6 cut(s) 27, 749, 1752, 2196, 2234, 2619
BseRI GAGGAG 2 cut(s) 1124, 2439
BseSI GKGCMC 1 cut(s) 1887
BseXI GCAGC 4 cut(s) 487, 1201, 1915, 2443
BsgI GTGCAG 1 cut(s) 2423
Bsh1236I CGCG 1 cut(s) 1536
BshFI GGCC 7 cut(s) 119, 264, 863, 1984, 2022, 2080, 2525
BshNI GGYRCC 1 cut(s) 1329
BsiHKAI GWGCWC 1 cut(s) 2229
BsiHKCI CYCGRG 1 cut(s) 234
BsiSI CCGG 3 cut(s) 276, 304, 1743
BslFI GGGAC 4 cut(s) 417, 524, 1333, 1524
BslI CCNNNNNNNGG 6 cut(s) 310, 534, 1868, 2018, 2249, 2520
BsmAI GTCTC 2 cut(s) 1733, 2010
BsmBI CGTCTC 1 cut(s) 2010
BsmFI GGGAC 4 cut(s) 417, 524, 1333, 1524
BsmI GAATGC 1 cut(s) 1697
BsnI GGCC 7 cut(s) 119, 264, 863, 1984, 2022, 2080, 2525
Bso31I GGTCTC 1 cut(s) 1733
BsoBI CYCGRG 1 cut(s) 234
Bsp1286I GDGCHC 3 cut(s) 1752, 1887, 2229
Bsp143I GATC 5 cut(s) 4, 164, 496, 2134, 2176
Bsp19I CCATGG 1 cut(s) 1627
BspANI GGCC 7 cut(s) 119, 264, 863, 1984, 2022, 2080, 2525
BspCNI CTCAG 3 cut(s) 94, 1840, 2495
BspFNI CGCG 1 cut(s) 1536
BspLI GGNNCC 5 cut(s) 957, 1313, 1331, 1496, 1522
BspMAI CTGCAG 1 cut(s) 2368
BspMI ACCTGC 2 cut(s) 2371, 2395
BspPI GGATC 1 cut(s) 12
BspQI GCTCTTC 2 cut(s) 96, 200
BspT107I GGYRCC 1 cut(s) 1329
BspTI CTTAAG 1 cut(s) 865
BspTNI GGTCTC 1 cut(s) 1733
BsrBI CCGCTC 3 cut(s) 210, 1114, 2332
BsrDI GCAATG 2 cut(s) 872, 2023
BsrI ACTGG 6 cut(s) 27, 749, 1752, 2196, 2234, 2619
BssECI CCNNGG 4 cut(s) 672, 1083, 1315, 1627
BssMI GATC 5 cut(s) 4, 164, 496, 2134, 2176
BssNI GRCGYC 1 cut(s) 981
BssT1I CCWWGG 1 cut(s) 1627
Bst2UI CCWGG 4 cut(s) 772, 1085, 1316, 2082
Bst6I CTCTTC 3 cut(s) 96, 200, 281
BstACI GRCGYC 1 cut(s) 981
BstAFI CTTAAG 1 cut(s) 865
BstAPI GCANNNNNTGC 1 cut(s) 2372
BstC8I GCNNGC 2 cut(s) 954, 2542
BstDEI CTNAG 8 cut(s) 81, 282, 480, 1095, 1303, 1784, 1848, 2482
BstDSI CCRYGG 1 cut(s) 1627
BstF5I GGATG 5 cut(s) 1926, 2077, 2090, 2238, 2437
BstFNI CGCG 1 cut(s) 1536
BstHHI GCGC 3 cut(s) 1538, 1645, 2344
BstKTI GATC 5 cut(s) 7, 167, 499, 2137, 2179
BstMAI GTCTC 2 cut(s) 1733, 2010
BstMBI GATC 5 cut(s) 4, 164, 496, 2134, 2176
BstMWI GCNNNNNNNGC 5 cut(s) 1555, 1780, 1951, 2034, 2372
BstNI CCWGG 4 cut(s) 772, 1085, 1316, 2082
BstNSI RCATGY 1 cut(s) 1040
BstSCI CCNGG 4 cut(s) 770, 1083, 1314, 2080
BstSFI CTRYAG 3 cut(s) 1336, 1878, 2364
BstSLI GKGCMC 1 cut(s) 1887
BstUI CGCG 1 cut(s) 1536
BstV1I GCAGC 4 cut(s) 487, 1201, 1915, 2443
BstV2I GAAGAC 3 cut(s) 976, 2109, 2289
BstX2I RGATCY 2 cut(s) 164, 496
BstYI RGATCY 2 cut(s) 164, 496
Bsu36I CCTNAGG 1 cut(s) 480
BsuI GTATCC 3 cut(s) 1224, 2442, 2602
BsuRI GGCC 7 cut(s) 119, 264, 863, 1984, 2022, 2080, 2525
BtgI CCRYGG 1 cut(s) 1627
BtrI CACGTC 1 cut(s) 1323
BtsCI GGATG 5 cut(s) 1926, 2077, 2090, 2238, 2437
BtsI GCAGTG 1 cut(s) 1544
BtsIMutI CAGTG 5 cut(s) 34, 742, 1544, 1759, 2227
BveI ACCTGC 2 cut(s) 2371, 2395
Cac8I GCNNGC 2 cut(s) 954, 2542
CfoI GCGC 3 cut(s) 1538, 1645, 2344
Cfr13I GGNCC 7 cut(s) 117, 262, 861, 1052, 1871, 2407, 2523
CseI GACGC 1 cut(s) 743
CsiI ACCWGGT 1 cut(s) 770
Csp6I GTAC 4 cut(s) 1394, 1623, 2096, 2282
CspCI CAANNNNNGTGG 2 cut(s) 1959, 1994
CviQI GTAC 4 cut(s) 1394, 1623, 2096, 2282
DdeI CTNAG 8 cut(s) 81, 282, 480, 1095, 1303, 1784, 1848, 2482
DpnI GATC 5 cut(s) 6, 166, 498, 2136, 2178
DpnII GATC 5 cut(s) 4, 164, 496, 2134, 2176
EaeI YGGCCR 3 cut(s) 1982, 2020, 2078
Eam1104I CTCTTC 3 cut(s) 96, 200, 281
EarI CTCTTC 3 cut(s) 96, 200, 281
Eco130I CCWWGG 1 cut(s) 1627
Eco24I GRGCYC 1 cut(s) 1752
Eco31I GGTCTC 1 cut(s) 1733
Eco47I GGWCC 3 cut(s) 1052, 1871, 2407
Eco57I CTGAAG 4 cut(s) 970, 1182, 1703, 2141
Eco81I CCTNAGG 1 cut(s) 480
Eco88I CYCGRG 1 cut(s) 234
EcoO109I RGGNCCY 1 cut(s) 2407
EcoRII CCWGG 4 cut(s) 770, 1083, 1314, 2080
EcoT14I CCWWGG 1 cut(s) 1627
EcoT22I ATGCAT 1 cut(s) 1697
EcoT38I GRGCYC 1 cut(s) 1752
ErhI CCWWGG 1 cut(s) 1627
Esp3I CGTCTC 1 cut(s) 2010
FalI AAGNNNNNCTT 2 cut(s) 90, 122
FaqI GGGAC 4 cut(s) 417, 524, 1333, 1524
FauI CCCGC 2 cut(s) 334, 2337
FblI GTMKAC 1 cut(s) 1675
Fnu4HI GCNGC 7 cut(s) 476, 1190, 1278, 1333, 1904, 1982, 2457
FokI GGATG 5 cut(s) 1913, 2084, 2097, 2245, 2424
FriOI GRGCYC 1 cut(s) 1752
Fsp4HI GCNGC 7 cut(s) 476, 1190, 1278, 1333, 1904, 1982, 2457
FspAI RTGCGCAY 1 cut(s) 1644
FspBI CTAG 6 cut(s) 63, 183, 534, 651, 762, 1058
FspI TGCGCA 1 cut(s) 1644
GlaI GCGC 3 cut(s) 1537, 1644, 2343
GluI GCNGC 7 cut(s) 476, 1190, 1278, 1333, 1904, 1982, 2457
GsuI CTGGAG 3 cut(s) 1330, 2318, 2436
HaeIII GGCC 7 cut(s) 119, 264, 863, 1984, 2022, 2080, 2525
HapII CCGG 3 cut(s) 276, 304, 1743
HgaI GACGC 1 cut(s) 743
HhaI GCGC 3 cut(s) 1538, 1645, 2344
Hin1I GRCGYC 1 cut(s) 981
Hin6I GCGC 3 cut(s) 1536, 1643, 2342
HinP1I GCGC 3 cut(s) 1536, 1643, 2342
HincII GTYRAC 6 cut(s) 309, 557, 798, 976, 1588, 1676
HindII GTYRAC 6 cut(s) 309, 557, 798, 976, 1588, 1676
HindIII AAGCTT 1 cut(s) 320
HinfI GANTC 8 cut(s) 79, 607, 922, 946, 1151, 1366, 1844, 2593
HpaI GTTAAC 2 cut(s) 309, 976
HpaII CCGG 3 cut(s) 276, 304, 1743
HphI GGTGA 8 cut(s) 344, 460, 1099, 1607, 1851, 2053, 2101, 2120
Hpy166II GTNNAC 7 cut(s) 309, 557, 798, 976, 1588, 1676, 1970
Hpy8I GTNNAC 7 cut(s) 309, 557, 798, 976, 1588, 1676, 1970
Hpy99I CGWCG 5 cut(s) 270, 983, 1536, 1578, 1779
HpyAV CCTTC 8 cut(s) 253, 353, 445, 1501, 1664, 1754, 1884, 2471
HpyCH4IV ACGT 9 cut(s) 559, 794, 981, 1180, 1322, 1446, 1989, 2007, 2509
HpyCH4V TGCA 9 cut(s) 595, 719, 1189, 1300, 1695, 2045, 2144, 2366, 2404
HpyF10VI GCNNNNNNNGC 5 cut(s) 1555, 1780, 1951, 2034, 2372
HpyF3I CTNAG 8 cut(s) 81, 282, 480, 1095, 1303, 1784, 1848, 2482
HpySE526I ACGT 9 cut(s) 559, 794, 981, 1180, 1322, 1446, 1989, 2007, 2509
Hsp92I GRCGYC 1 cut(s) 981
HspAI GCGC 3 cut(s) 1536, 1643, 2342
KspAI GTTAAC 2 cut(s) 309, 976
Kzo9I GATC 5 cut(s) 4, 164, 496, 2134, 2176
LguI GCTCTTC 2 cut(s) 96, 200
Lsp1109I GCAGC 4 cut(s) 487, 1201, 1915, 2443
LweI GCATC 4 cut(s) 1654, 1704, 2054, 2527
MabI ACCWGGT 1 cut(s) 770
MaeI CTAG 6 cut(s) 63, 183, 534, 651, 762, 1058
MaeII ACGT 9 cut(s) 559, 794, 981, 1180, 1322, 1446, 1989, 2007, 2509
MaeIII GTNAC 6 cut(s) 187, 711, 893, 1234, 1787, 2583
MalI GATC 5 cut(s) 6, 166, 498, 2136, 2178
MbiI CCGCTC 3 cut(s) 210, 1114, 2332
MboI GATC 5 cut(s) 4, 164, 496, 2134, 2176
MfeI CAATTG 1 cut(s) 590
MflI RGATCY 2 cut(s) 164, 496
MhlI GDGCHC 3 cut(s) 1752, 1887, 2229
MlyI GAGTC 2 cut(s) 73, 616
MmeI TCCRAC 2 cut(s) 749, 1556
Mph1103I ATGCAT 1 cut(s) 1697
MroXI GAANNNNTTC 2 cut(s) 1525, 2552
MseI TTAA 9 cut(s) 161, 308, 866, 975, 1344, 1455, 1541, 1733, 1770
MslI CAYNNNNRTG 3 cut(s) 372, 1085, 1690
MspA1I CMGCKG 3 cut(s) 329, 952, 2456
MspCI CTTAAG 1 cut(s) 865
MspI CCGG 3 cut(s) 276, 304, 1743
MspR9I CCNGG 4 cut(s) 772, 1085, 1316, 2082
MunI CAATTG 1 cut(s) 590
Mva1269I GAATGC 1 cut(s) 1697
MvaI CCWGG 4 cut(s) 772, 1085, 1316, 2082
MvnI CGCG 1 cut(s) 1536
MwoI GCNNNNNNNGC 5 cut(s) 1555, 1780, 1951, 2034, 2372
NcoI CCATGG 1 cut(s) 1627
NdeII GATC 5 cut(s) 4, 164, 496, 2134, 2176
NlaIV GGNNCC 5 cut(s) 957, 1313, 1331, 1496, 1522
NmuCI GTSAC 2 cut(s) 1787, 2583
NsbI TGCGCA 1 cut(s) 1644
NsiI ATGCAT 1 cut(s) 1697
NspI RCATGY 1 cut(s) 1040
OliI CACNNNNGTG 1 cut(s) 1085
PaeR7I CTCGAG 1 cut(s) 234
PciSI GCTCTTC 2 cut(s) 96, 200
PcsI WCGNNNNNNNCGW 2 cut(s) 565, 978
PctI GAATGC 1 cut(s) 1697
PdmI GAANNNNTTC 2 cut(s) 1525, 2552
PfeI GAWTC 6 cut(s) 922, 946, 1151, 1366, 1844, 2593
PflMI CCANNNNNTGG 1 cut(s) 2520
PkrI GCNGC 7 cut(s) 477, 1191, 1279, 1334, 1905, 1983, 2458
PleI GAGTC 2 cut(s) 73, 615
PpsI GAGTC 2 cut(s) 73, 615
PpuMI RGGWCCY 1 cut(s) 2407
PsiI TTATAA 1 cut(s) 110
Psp1406I AACGTT 2 cut(s) 559, 2509
Psp5II RGGWCCY 1 cut(s) 2407
Psp6I CCWGG 4 cut(s) 770, 1083, 1314, 2080
PspGI CCWGG 4 cut(s) 770, 1083, 1314, 2080
PspN4I GGNNCC 5 cut(s) 957, 1313, 1331, 1496, 1522
PspPI GGNCC 7 cut(s) 117, 262, 861, 1052, 1871, 2407, 2523
PspPPI RGGWCCY 1 cut(s) 2407
PsrI GAACNNNNNNTAC 2 cut(s) 1992, 2024
PstI CTGCAG 1 cut(s) 2368
PsuI RGATCY 2 cut(s) 164, 496
PvuII CAGCTG 2 cut(s) 952, 2456
RsaI GTAC 4 cut(s) 1395, 1624, 2097, 2283
RsaNI GTAC 4 cut(s) 1394, 1623, 2096, 2282
RseI CAYNNNNRTG 3 cut(s) 372, 1085, 1690
SalI GTCGAC 1 cut(s) 1674
SapI GCTCTTC 2 cut(s) 96, 200
SaqAI TTAA 9 cut(s) 161, 308, 866, 975, 1344, 1455, 1541, 1733, 1770
SatI GCNGC 7 cut(s) 476, 1190, 1278, 1333, 1904, 1982, 2457
Sau3AI GATC 5 cut(s) 4, 164, 496, 2134, 2176
Sau96I GGNCC 7 cut(s) 117, 262, 861, 1052, 1871, 2407, 2523
SchI GAGTC 2 cut(s) 73, 616
ScrFI CCNGG 4 cut(s) 772, 1085, 1316, 2082
SduI GDGCHC 3 cut(s) 1752, 1887, 2229
SexAI ACCWGGT 1 cut(s) 770
SfaNI GCATC 4 cut(s) 1654, 1704, 2054, 2527
SfcI CTRYAG 3 cut(s) 1336, 1878, 2364
Sfr274I CTCGAG 1 cut(s) 234
SinI GGWCC 3 cut(s) 1052, 1871, 2407
SlaI CTCGAG 1 cut(s) 234
SmiMI CAYNNNNRTG 3 cut(s) 372, 1085, 1690
SmlI CTYRAG 4 cut(s) 234, 429, 865, 1949
SmoI CTYRAG 4 cut(s) 234, 429, 865, 1949
SpeI ACTAGT 2 cut(s) 62, 650
SspMI CTAG 6 cut(s) 63, 183, 534, 651, 762, 1058
StyD4I CCNGG 4 cut(s) 770, 1083, 1314, 2080
StyI CCWWGG 1 cut(s) 1627
TaiI ACGT 9 cut(s) 562, 797, 984, 1183, 1325, 1449, 1992, 2010, 2512
TaqI TCGA 9 cut(s) 90, 137, 235, 268, 633, 767, 1364, 1675, 2530
TaqII GACCGA 1 cut(s) 1577
TatI WGTACW 1 cut(s) 2281
TauI GCSGC 3 cut(s) 1280, 1335, 1984
TfiI GAWTC 6 cut(s) 922, 946, 1151, 1366, 1844, 2593
Tru1I TTAA 9 cut(s) 161, 308, 866, 975, 1344, 1455, 1541, 1733, 1770
Tru9I TTAA 9 cut(s) 161, 308, 866, 975, 1344, 1455, 1541, 1733, 1770
TscAI CASTG 5 cut(s) 34, 749, 1551, 1759, 2234
TseFI GTSAC 2 cut(s) 1787, 2583
TseI GCWGC 4 cut(s) 475, 1189, 1903, 2456
Tsp45I GTSAC 2 cut(s) 1787, 2583
TspGWI ACGGA 2 cut(s) 266, 1541
TspRI CASTG 5 cut(s) 34, 749, 1551, 1759, 2234
Van91I CCANNNNNTGG 1 cut(s) 2520
Vha464I CTTAAG 1 cut(s) 865
VpaK11BI GGWCC 3 cut(s) 1052, 1871, 2407
XapI RAATTY 1 cut(s) 1406
XceI RCATGY 1 cut(s) 1040
XhoI CTCGAG 1 cut(s) 234
XmiI GTMKAC 1 cut(s) 1675
XmnI GAANNNNTTC 2 cut(s) 1525, 2552
XspI CTAG 6 cut(s) 63, 183, 534, 651, 762, 1058
ZraI GACGTC 1 cut(s) 982
Zsp2I ATGCAT 1 cut(s) 1697
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.