Rw7G002840

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000143
Physical Location & Seq
Forward (+)
2345953 .. 2349737
3785 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G002840.1

Sequence Viewer

Length: 1245 bp
ATGGAACAAGAGCCCCTGGATGCTGGGTTGCAAATTTCTATGTCTTCAGATGATATGGAAGAAGACTTACAGTCAAATCACCCGTCTAGTATCATTGAAACATCTCAGTTTAGAAGGGAGAGTCTAGGTGGGCGTTCGATTATTCAAGCATTATTAGATGAGCTTGGTGGTGCTGGTTTTTCTCATAATGTCAAATATGATCACTCTGGTCATTTGACTCATCTATTCTTTGCTCATCCCACTTCCATTGAGTTGACGAAAAGCTACTCTAATGTCTTTGTGATGGATTGTACTTATAAGACAAATAAGTACAAGATGCCATTACTTGAGATTGTAGGAGTGTCGAGTTTCAACACATCATTCTATTCGTGTTTTGTTTTCATGCAAAAAGAGGAACAACAGGATTATCAGTGGGCTCTTGAAATGTTCAGTAAGTTGTTGGGAGATGGTAATCATCCATTGGCGATTATAACTGATAGGGAGTTGGCTTTAATGAAAGCAATAGAAGTTGTGTTTCCGATGACTCCTAATCTTTTATGCATATGGCATATTGAAAAAAATATTCTTGCACATTGTAAGGGTCAGTTTAAGGAAGATGCAGATTGGGTTGGTTTTATGTCTTCTTGGAGTACCCTTGTAAAGTCTTGGGACGTGTCAACGTTTAATGAAGCTTGGAACCGTTTTCAAATTGAGTACAAAGACTATGCTTCCATTCTAACTTACATTGGCAATACTTGGCTTCCATGGAAAGAGAGGTTTGTATTTGCATGGACCGGACAGATTTCACACTTTGGTAATAATGTTACTTCTAGAGCAGAAGACTATTCATCCCAATGCAAGGGCCAGTTTTCCAAAACCATGGGTCTTCCATGTGTGCACATGATCAAGGAGATGAATATTGAAGTGCTGCCTTTAAATCAGATTCATGAGCAATGGAGGATTGGCACAAGATCATTCACTAATGATCATCGTGCAAGCTTGGATCATGAAGATCCATTTAGTAGTCTTTTATCTGAGGTTAAAGAGAAGTACGAAAAACAGCCGCTAGCGCAAAAAGAAAATACCATAAGGCAGCTTTCTCAGATTCTTGGTGCATCTTGTCCTTTAATTTTTGAACCTACTCTTCAACCTCACAAAGGCCGTCCGGTAGGATCAAATAAAAGAAAGGAAACTAGCTCTACAAGGCGGGAACCTTCATATTTTGAGAGAGTGGAGAAGGCACCTCGAAAATGTAGTGGAGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE

Protein Analysis

414

Amino Acids

47.6

Weight (kDa)

6.03

Isoelectric Point (pI)

54.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ZSWIM1-3_RNaseH-like PF21056 63 - 175 1.8e-12 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE PF10551 92 - 187 1.4e-25 MULE transposase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000143)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G76710 AT1G76710 AT1G76710 AT1G76710
fragaria_vesca FvH4_1g20063 FvH4_2g15231 FvH4_3g04011 FvH4_3g28681 FvH4_4g01411 FvH4_4g10181 FvH4_4g15922 FvH4_4g16651 FvH4_4g16652 FvH4_5g13892 FvH4_5g13893 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g25511 FvH4_6g12551 FvH4_6g12552 FvH4_6g38841 FvH4_7g04391
malus_domestica MD05G1031300.v1.1 MD05G1031400.v1.1 MD05G1031500.v1.1 MD08G1164400.v1.1 MD10G1032900.v1.1 MD10G1033000.v1.1 MD10G1033100.v1.1
prunus_persica Prupe.3G240700_v2.0.a1 Prupe.7G144600_v2.0.a1 Prupe.8G038500_v2.0.a1 Prupe.8G038500_v2.0.a1
pyrus_communis pycom05g02250 pycom05g02260 pycom05g02270 pycom05g02280 pycom08g14160 pycom10g02100 pycom10g02110 pycom10g02130
rosa_chinensis RchiOBHm_Chr1g0329481 RchiOBHm_Chr1g0329491 RchiOBHm_Chr1g0341531 RchiOBHm_Chr3g0464811 RchiOBHm_Chr3g0494701 RchiOBHm_Chr3g0497501 RchiOBHm_Chr4g0385841 RchiOBHm_Chr5g0061181 RchiOBHm_Chr6g0263001 RchiOBHm_Chr7g0193111 RchiOBHm_Chr7g0206281 RchiOBHm_Chr7g0206311
rosa_laevigata RLG00000018908 RLG00000028528 RLG00000028803 RLG00000029882 RLG00000029883 RLG00000030361
rosa_multiflora Rmu_co8196328.1_g000001 Rmu_co8259135.1_g000001 Rmu_co8269185.1_g000001 Rmu_sc0000076.1_g000019 Rmu_sc0000311.1_g000007 Rmu_sc0000429.1_g000038 Rmu_sc0000429.1_g000039 Rmu_sc0000429.1_g000040 Rmu_sc0000511.1_g000005 Rmu_sc0000539.1_g000054 Rmu_sc0000566.1_g000039 Rmu_sc0000805.1_g000032 Rmu_sc0000870.1_g000073 Rmu_sc0000870.1_g000074 Rmu_sc0001010.1_g000018 Rmu_sc0001083.1_g000013 Rmu_sc0001114.1_g000011 Rmu_sc0001702.1_g000027 Rmu_sc0001779.1_g000012 Rmu_sc0002923.1_g000036 Rmu_sc0003242.1_g000011 Rmu_sc0003291.1_g000036 Rmu_sc0003393.1_g000012 Rmu_sc0003872.1_g000016 Rmu_sc0003872.1_g000017 Rmu_sc0003872.1_g000018 Rmu_sc0004084.1_g000020 Rmu_sc0004386.1_g000005 Rmu_sc0004622.1_g000005 Rmu_sc0004742.1_g000021 Rmu_sc0004755.1_g000020 Rmu_sc0004805.1_g000036 Rmu_sc0005065.1_g000006 Rmu_sc0005177.1_g000004 Rmu_sc0006373.1_g000003 Rmu_sc0006373.1_g000004 Rmu_sc0007121.1_g000002 Rmu_sc0007943.1_g000003 Rmu_sc0010368.1_g000006 Rmu_sc0010543.1_g000001 Rmu_sc0012591.1_g000006 Rmu_sc0013504.1_g000009 Rmu_sc0015025.1_g000001 Rmu_sc0016170.1_g000001 Rmu_sc0017156.1_g000001 Rmu_sc0026439.1_g000001
rosa_roxburghii Rroxscaffold_175G00432280 Rroxscaffold_1G00030190 Rroxscaffold_1G00030880 Rroxscaffold_2G00090520 Rroxscaffold_3G00227940 Rroxscaffold_3G00233400 Rroxscaffold_3G00238500 Rroxscaffold_3G00251650 Rroxscaffold_4G00301570 Rroxscaffold_4G00321040 Rroxscaffold_5G00350880 Rroxscaffold_7G00184400
rosa_rugosa Rorug01G0080800 Rorug01G0080900 Rorug01G0193900 Rorug02G0275900 Rorug02G0275900 Rorug02G0275900 Rorug02G0305400 Rorug02G0311800 Rorug02G0350400 Rorug02G0381300 Rorug03G0136700 Rorug03G0181900 Rorug03G0268000 Rorug04G0301600 Rorug05G0175100 Rorug05G0250700 Rorug05G0298200 Rorug05G0596000 Rorug06G0029500 Rorug07G0094300 Rorug07G0094300 Rorug07G0095400 Rorug07G0140100
rosa_samantha Rh1AG099200 Rh1AG190500 Rh1BG078900 Rh1BG079000 Rh1BG079100 Rh1CG084600 Rh1CG084700 Rh1CG095300 Rh1CG175900 Rh1DG103300 Rh1DG150400 Rh2AG079300 Rh2AG272400 Rh2AG464800 Rh2AG507400 Rh2DG078300 Rh2DG078400 Rh3CG206900 Rh3CG295400 Rh3DG206800 Rh3DG356200 Rh4CG071500 Rh4CG179200 Rh4DG064700 Rh5CG362400 Rh7AG212300 Rh7AG226200 Rh7BG222200
rosa_wichuraiana Rw0G009990 Rw0G011260 Rw0G011270 Rw0G012910 Rw0G013740 Rw1G007740 Rw1G013050 Rw1G014230 Rw2G014270 Rw3G012720 Rw3G028110 Rw4G006630 Rw4G015270 Rw4G016160 Rw4G031380 Rw5G011440 Rw5G029180 Rw5G048360 Rw5G048430 Rw5G048780 Rw6G005250 Rw6G006390 Rw7G002840 Rw7G014080 Rw7G019650 Rw7G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 297, 470
AccB1I GGYRCC 1 cut(s) 1219
AciI CCGC 2 cut(s) 1043, 1186
AclI AACGTT 1 cut(s) 659
AclWI GGATC 3 cut(s) 986, 990, 1159
AcsI RAATTY 1 cut(s) 33
AcuI CTGAAG 1 cut(s) 30
AfaI GTAC 5 cut(s) 292, 311, 631, 695, 1031
AfiI CCNNNNNNNGG 2 cut(s) 838, 1136
AflIII ACRYGT 1 cut(s) 651
AgsI TTSAA 9 cut(s) 98, 146, 352, 422, 554, 686, 902, 1115, 1127
AhdI GACNNNNNGTC 1 cut(s) 70
AjiI CACGTC 1 cut(s) 652
AjnI CCWGG 1 cut(s) 15
AluBI AGCT 6 cut(s) 163, 264, 671, 978, 1075, 1176
AluI AGCT 6 cut(s) 163, 264, 671, 978, 1075, 1176
Alw21I GWGCWC 1 cut(s) 879
Alw44I GTGCAC 1 cut(s) 875
AlwI GGATC 3 cut(s) 986, 990, 1159
AoxI GGCC 2 cut(s) 841, 1138
ApaLI GTGCAC 1 cut(s) 875
ApeKI GCWGC 2 cut(s) 907, 1072
ApoI RAATTY 1 cut(s) 33
ArsI GACNNNNNNTTYG 2 cut(s) 68, 100
AspLEI GCGC 1 cut(s) 1051
AspS9I GGNCC 2 cut(s) 771, 841
AsuHPI GGTGA 1 cut(s) 71
AsuNHI GCTAGC 1 cut(s) 1045
AvaII GGWCC 1 cut(s) 771
BaeGI GKGCMC 1 cut(s) 879
BanI GGYRCC 1 cut(s) 1219
BanII GRGCYC 2 cut(s) 15, 418
BarI GAAGNNNNNNTAC 2 cut(s) 51, 83
BbsI GAAGAC 5 cut(s) 36, 69, 612, 825, 857
Bbv12I GWGCWC 1 cut(s) 879
BbvI GCAGC 2 cut(s) 894, 1084
BccI CCATC 2 cut(s) 277, 440
BceAI ACGGC 1 cut(s) 1125
BciT130I CCWGG 1 cut(s) 17
BclI TGATCA 3 cut(s) 199, 882, 964
BfaI CTAG 5 cut(s) 87, 125, 810, 1046, 1173
BisI GCNGC 3 cut(s) 908, 1043, 1073
BlsI GCNGC 3 cut(s) 909, 1044, 1074
Bme1390I CCNGG 1 cut(s) 17
Bme18I GGWCC 1 cut(s) 771
BmeRI GACNNNNNGTC 1 cut(s) 70
BmgBI CACGTC 1 cut(s) 652
BmgT120I GGNCC 2 cut(s) 771, 841
BmiI GGNNCC 3 cut(s) 677, 1191, 1221
BmrFI CCNGG 1 cut(s) 17
BmsI GCATC 4 cut(s) 10, 306, 586, 1103
BmtI GCTAGC 1 cut(s) 1049
BpiI GAAGAC 5 cut(s) 36, 69, 612, 825, 857
BpuEI CTTGAG 1 cut(s) 347
BsaBI GATNNNNATC 1 cut(s) 450
BsaJI CCNNGG 3 cut(s) 15, 743, 858
BsaWI WCCGGW 2 cut(s) 773, 1144
Bsc4I CCNNNNNNNGG 2 cut(s) 838, 1136
Bse1I ACTGG 1 cut(s) 844
Bse3DI GCAATG 1 cut(s) 938
Bse8I GATNNNNATC 1 cut(s) 450
BseBI CCWGG 1 cut(s) 17
BseDI CCNNGG 3 cut(s) 15, 743, 858
BseGI GGATG 4 cut(s) 25, 235, 454, 827
BseJI GATNNNNATC 1 cut(s) 450
BseLI CCNNNNNNNGG 2 cut(s) 838, 1136
BseMI GCAATG 1 cut(s) 938
BseMII CTCAG 3 cut(s) 119, 1005, 1094
BseNI ACTGG 1 cut(s) 844
BseSI GKGCMC 1 cut(s) 879
BseXI GCAGC 2 cut(s) 894, 1084
BseYI CCCAGC 1 cut(s) 23
BshFI GGCC 2 cut(s) 843, 1140
BshNI GGYRCC 1 cut(s) 1219
BsiHKAI GWGCWC 1 cut(s) 879
BsiSI CCGG 2 cut(s) 774, 1145
BslFI GGGAC 1 cut(s) 662
BslI CCNNNNNNNGG 2 cut(s) 838, 1136
BsmFI GGGAC 1 cut(s) 662
BsnI GGCC 2 cut(s) 843, 1140
Bsp1286I GDGCHC 3 cut(s) 15, 418, 879
Bsp143I GATC 7 cut(s) 199, 882, 950, 964, 982, 991, 1151
Bsp19I CCATGG 2 cut(s) 743, 858
BspACI CCGC 2 cut(s) 1043, 1186
BspANI GGCC 2 cut(s) 843, 1140
BspCNI CTCAG 3 cut(s) 118, 1006, 1093
BspHI TCATGA 2 cut(s) 925, 985
BspLI GGNNCC 3 cut(s) 677, 1191, 1221
BspOI GCTAGC 1 cut(s) 1049
BspPI GGATC 3 cut(s) 986, 990, 1159
BspT107I GGYRCC 1 cut(s) 1219
BsrDI GCAATG 1 cut(s) 938
BsrI ACTGG 1 cut(s) 844
BssECI CCNNGG 3 cut(s) 15, 743, 858
BssMI GATC 7 cut(s) 199, 882, 950, 964, 982, 991, 1151
BssT1I CCWWGG 2 cut(s) 743, 858
Bst2UI CCWGG 1 cut(s) 17
Bst4CI ACNGT 2 cut(s) 72, 680
Bst6I CTCTTC 1 cut(s) 1128
BstC8I GCNNGC 2 cut(s) 976, 1047
BstDEI CTNAG 3 cut(s) 105, 1014, 1080
BstDSI CCRYGG 2 cut(s) 743, 858
BstENI CCTNNNNNAGG 1 cut(s) 1134
BstF5I GGATG 4 cut(s) 25, 235, 454, 827
BstHHI GCGC 1 cut(s) 1051
BstKTI GATC 7 cut(s) 202, 885, 953, 967, 985, 994, 1154
BstMBI GATC 7 cut(s) 199, 882, 950, 964, 982, 991, 1151
BstMWI GCNNNNNNNGC 1 cut(s) 1048
BstNI CCWGG 1 cut(s) 17
BstSCI CCNGG 1 cut(s) 15
BstSLI GKGCMC 1 cut(s) 879
BstV1I GCAGC 2 cut(s) 894, 1084
BstV2I GAAGAC 5 cut(s) 36, 69, 612, 825, 857
BstX2I RGATCY 1 cut(s) 991
BstXI CCANNNNNNTGG 1 cut(s) 859
BstYI RGATCY 1 cut(s) 991
BsuRI GGCC 2 cut(s) 843, 1140
BtgI CCRYGG 2 cut(s) 743, 858
BtrI CACGTC 1 cut(s) 652
BtsCI GGATG 4 cut(s) 25, 235, 454, 827
BtsIMutI CAGTG 1 cut(s) 416
Cac8I GCNNGC 2 cut(s) 976, 1047
CciI TCATGA 2 cut(s) 925, 985
CfoI GCGC 1 cut(s) 1051
Cfr13I GGNCC 2 cut(s) 771, 841
Csp6I GTAC 5 cut(s) 291, 310, 630, 694, 1030
CspCI CAANNNNNGTGG 2 cut(s) 229, 264
CviAII CATG 8 cut(s) 382, 744, 768, 859, 870, 880, 926, 986
CviQI GTAC 5 cut(s) 291, 310, 630, 694, 1030
DdeI CTNAG 3 cut(s) 105, 1014, 1080
DpnI GATC 7 cut(s) 201, 884, 952, 966, 984, 993, 1153
DpnII GATC 7 cut(s) 199, 882, 950, 964, 982, 991, 1151
DraI TTTAAA 1 cut(s) 915
DriI GACNNNNNGTC 1 cut(s) 70
Eam1104I CTCTTC 1 cut(s) 1128
Eam1105I GACNNNNNGTC 1 cut(s) 70
EarI CTCTTC 1 cut(s) 1128
Eco130I CCWWGG 2 cut(s) 743, 858
Eco24I GRGCYC 2 cut(s) 15, 418
Eco47I GGWCC 1 cut(s) 771
Eco57I CTGAAG 1 cut(s) 30
EcoNI CCTNNNNNAGG 1 cut(s) 1134
EcoRII CCWGG 1 cut(s) 15
EcoT14I CCWWGG 2 cut(s) 743, 858
EcoT22I ATGCAT 1 cut(s) 542
EcoT38I GRGCYC 2 cut(s) 15, 418
ErhI CCWWGG 2 cut(s) 743, 858
FaeI CATG 8 cut(s) 385, 747, 771, 862, 873, 883, 929, 989
FaqI GGGAC 1 cut(s) 662
FatI CATG 8 cut(s) 381, 743, 767, 858, 869, 879, 925, 985
FauI CCCGC 1 cut(s) 1179
FauNDI CATATG 1 cut(s) 542
FbaI TGATCA 3 cut(s) 199, 882, 964
Fnu4HI GCNGC 3 cut(s) 908, 1043, 1073
FokI GGATG 4 cut(s) 32, 222, 441, 814
FriOI GRGCYC 2 cut(s) 15, 418
Fsp4HI GCNGC 3 cut(s) 908, 1043, 1073
FspBI CTAG 5 cut(s) 87, 125, 810, 1046, 1173
GlaI GCGC 1 cut(s) 1050
GluI GCNGC 3 cut(s) 908, 1043, 1073
GsaI CCCAGC 1 cut(s) 27
HaeIII GGCC 2 cut(s) 843, 1140
HapII CCGG 2 cut(s) 774, 1145
HhaI GCGC 1 cut(s) 1051
Hin1II CATG 8 cut(s) 385, 747, 771, 862, 873, 883, 929, 989
Hin6I GCGC 1 cut(s) 1049
HinP1I GCGC 1 cut(s) 1049
HincII GTYRAC 2 cut(s) 255, 657
HindII GTYRAC 2 cut(s) 255, 657
HindIII AAGCTT 2 cut(s) 669, 976
HinfI GANTC 5 cut(s) 121, 217, 523, 922, 1084
HpaII CCGG 2 cut(s) 774, 1145
HphI GGTGA 1 cut(s) 71
Hpy166II GTNNAC 3 cut(s) 255, 657, 877
Hpy188I TCNGA 5 cut(s) 49, 519, 921, 1015, 1083
Hpy188III TCNNGA 4 cut(s) 419, 810, 926, 986
Hpy8I GTNNAC 3 cut(s) 255, 657, 877
HpyAV CCTTC 3 cut(s) 108, 1203, 1210
HpyCH4III ACNGT 2 cut(s) 72, 680
HpyCH4IV ACGT 2 cut(s) 651, 659
HpyF10VI GCNNNNNNNGC 1 cut(s) 1048
HpyF3I CTNAG 3 cut(s) 105, 1014, 1080
HpySE526I ACGT 2 cut(s) 651, 659
Hsp92II CATG 8 cut(s) 385, 747, 771, 862, 873, 883, 929, 989
HspAI GCGC 1 cut(s) 1049
Ksp22I TGATCA 3 cut(s) 199, 882, 964
Kzo9I GATC 7 cut(s) 199, 882, 950, 964, 982, 991, 1151
LpnPI CCDG 9 cut(s) 2, 9, 29, 159, 192, 386, 787, 857, 1158
Lsp1109I GCAGC 2 cut(s) 894, 1084
LweI GCATC 4 cut(s) 10, 306, 586, 1103
MaeI CTAG 5 cut(s) 87, 125, 810, 1046, 1173
MaeII ACGT 2 cut(s) 651, 659
MaeIII GTNAC 1 cut(s) 802
MalI GATC 7 cut(s) 201, 884, 952, 966, 984, 993, 1153
MboI GATC 7 cut(s) 199, 882, 950, 964, 982, 991, 1151
MboII GAAGA 9 cut(s) 36, 71, 74, 605, 612, 830, 857, 1001, 1115
MflI RGATCY 1 cut(s) 991
MhlI GDGCHC 3 cut(s) 15, 418, 879
MluCI AATT 3 cut(s) 33, 687, 1107
MlyI GAGTC 3 cut(s) 130, 211, 517
MnlI CCTC 6 cut(s) 385, 747, 930, 1009, 1140, 1233
Mph1103I ATGCAT 1 cut(s) 542
MseI TTAA 6 cut(s) 491, 588, 663, 914, 1020, 1106
MslI CAYNNNNRTG 1 cut(s) 832
MspI CCGG 2 cut(s) 774, 1145
MspR9I CCNGG 1 cut(s) 17
MvaI CCWGG 1 cut(s) 17
MwoI GCNNNNNNNGC 1 cut(s) 1048
NcoI CCATGG 2 cut(s) 743, 858
NdeI CATATG 1 cut(s) 542
NdeII GATC 7 cut(s) 199, 882, 950, 964, 982, 991, 1151
NheI GCTAGC 1 cut(s) 1045
NlaIII CATG 8 cut(s) 385, 747, 771, 862, 873, 883, 929, 989
NlaIV GGNNCC 3 cut(s) 677, 1191, 1221
NsiI ATGCAT 1 cut(s) 542
PagI TCATGA 2 cut(s) 925, 985
PfeI GAWTC 2 cut(s) 922, 1084
PkrI GCNGC 3 cut(s) 909, 1044, 1074
PleI GAGTC 3 cut(s) 129, 211, 517
PpsI GAGTC 3 cut(s) 129, 211, 517
PsiI TTATAA 2 cut(s) 297, 470
Psp1406I AACGTT 1 cut(s) 659
Psp6I CCWGG 1 cut(s) 15
PspFI CCCAGC 1 cut(s) 23
PspGI CCWGG 1 cut(s) 15
PspN4I GGNNCC 3 cut(s) 677, 1191, 1221
PspPI GGNCC 2 cut(s) 771, 841
PsuI RGATCY 1 cut(s) 991
RsaI GTAC 5 cut(s) 292, 311, 631, 695, 1031
RsaNI GTAC 5 cut(s) 291, 310, 630, 694, 1030
RseI CAYNNNNRTG 1 cut(s) 832
SaqAI TTAA 6 cut(s) 491, 588, 663, 914, 1020, 1106
SatI GCNGC 3 cut(s) 908, 1043, 1073
Sau3AI GATC 7 cut(s) 199, 882, 950, 964, 982, 991, 1151
Sau96I GGNCC 2 cut(s) 771, 841
SchI GAGTC 3 cut(s) 130, 211, 517
ScrFI CCNGG 1 cut(s) 17
SduI GDGCHC 3 cut(s) 15, 418, 879
SfaNI GCATC 4 cut(s) 10, 306, 586, 1103
SinI GGWCC 1 cut(s) 771
SmiMI CAYNNNNRTG 1 cut(s) 832
SmlI CTYRAG 1 cut(s) 326
SmoI CTYRAG 1 cut(s) 326
Sse9I AATT 3 cut(s) 33, 687, 1107
SsiI CCGC 2 cut(s) 1043, 1186
SspI AATATT 2 cut(s) 562, 898
SspMI CTAG 5 cut(s) 87, 125, 810, 1046, 1173
StyD4I CCNGG 1 cut(s) 15
StyI CCWWGG 2 cut(s) 743, 858
TaaI ACNGT 2 cut(s) 72, 680
TaiI ACGT 2 cut(s) 654, 662
TaqI TCGA 3 cut(s) 137, 344, 1225
TasI AATT 3 cut(s) 33, 687, 1107
TatI WGTACW 3 cut(s) 290, 309, 693
TauI GCSGC 1 cut(s) 1045
TfiI GAWTC 2 cut(s) 922, 1084
Tru1I TTAA 6 cut(s) 491, 588, 663, 914, 1020, 1106
Tru9I TTAA 6 cut(s) 491, 588, 663, 914, 1020, 1106
TscAI CASTG 1 cut(s) 416
TseI GCWGC 2 cut(s) 907, 1072
TspDTI ATGAA 8 cut(s) 370, 509, 681, 816, 908, 914, 1002, 1185
TspRI CASTG 1 cut(s) 416
VneI GTGCAC 1 cut(s) 875
VpaK11BI GGWCC 1 cut(s) 771
XagI CCTNNNNNAGG 1 cut(s) 1134
XapI RAATTY 1 cut(s) 33
XbaI TCTAGA 1 cut(s) 809
XspI CTAG 5 cut(s) 87, 125, 810, 1046, 1173
Zsp2I ATGCAT 1 cut(s) 542
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.