Rorug03G0181900

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0000143
Physical Location & Seq
Forward (+)
15603606 .. 15605641
2036 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0181900.1

Sequence Viewer

Length: 1569 bp
ATGTCGACGTTGACCTTGATGGAGTACTGGGAATGGTACTCTTTGAATGACTCTCTTCTGTGTTTTATCATACCACCTCTTCTCTTCTTGCTGATCATTCACTGGAGATCAAACTCCGGCCGACACGGCCATCGGCTTCCTCCCGGCCCTCCAGGATGGCCCATTTTCGGCAACATGTTCCAAGTCGGAGCAATGCCTCACAAAACACTCACTCATCTAAGCCACAAGTACGGTCCGGTAATGTGGCTTAGACTCGGTGCCAAAAACACGATGGTAATACAGTCTACCAAAGCGGCCACCATGTTTTTCAAGCAACACGACCTGTCGTTCGCGGACCGCACTGTCTATGAAGTAAGCCGTGTGTATGGCTACCACAAGGGGTCGCTGGCCTTATCCCCTTACGGATCTCACTGGCGGGTTATGAGACGCCTACTCACGGTGGACATGTTGGTCAACCACCGCATCAACGACACGGCGTCTATACGCCGGAAGTGCGCCGACGACTTGCAGTCGTGGATCGAAGAGGAAGCGTCGTCGTCGTCGTCGTCATCTCATGGAGTGGAGGTGGCACGTTTGGTGTTCCTCATGACGTTCAACGTTTTCGGGAACCTGGTGTTGTCGAGGGACTTGGTGGGGCCCAAATCGGAGGAAGGGATGGAGTTTTTCCGGGCGGTGCATGGATTGATGGAGTGGAGTGGGCATGCAAACATGGCTGATTACTTTCCGTGGCTGAAGTGGCTTGACCTGCAAGGTTTGAAGAGGAAGATGAAGAGGGATCTTGGAAAGGCTCTGGAGATTGTCTCCAAGTTTGTGAAGGAGCGCATGAATGAGAGGAAGATGGAGGGTGCAGAGCATCAGAAAAATGGTGGAAACTTCTTGGATGTTGTGCTTGAACTAATGGAAGGAAGTGGGAGTGATGAACCACCCGAGATTTCTGATCATAATCTCAACATTTTCATACTGGAAATATTTATGGCGGGTTCAGAAACAACAAGCAGCACAATAGAATGGGCACTCACCGAGCTTTTATGCAACCCAGAGGTGCTAATGAAGGCCAAATCCGAGCTCAATCAAGTCATAGGTCGAAACAGAAAGATCGAAGAGAGTCACATTGACAATCTTCCCTACTTACAATGCGTAATCAAAGAAACTCTACGATTGCATCCGCCACTTCCATTCCTAGTACCACGAAAGGCAATGCACGACACTGTTTTTAGCGGATACTCGATACCGAAGAACACACAGGTATTTGTGAATGTTTATGCAATAGGAAGAGACCCAGACGTGTGGAGTGACCCCGTATCGTTTAAGCCTGAGAGGTTCATAGGATCAAAAATTGATTACAAGGGGCAACATTATGAGTTGATTCCATTTGGAGCTGGGAGACGAATGTGTGCGGGTGTGCCATTGGGTCATAGAATGTTGCACCTAACTTTGGGGCTGTTACTTCACCAATTTGATTGGGAATTTGATGGTAGTATTACTAGAGAGACTATGGACTGGAATGAAAGGTTAGGAATGACAATGCGAAAGCATGAGCCATTACTAGCAGTGCCTAAAAAGTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AFT FAR1 MULE

Protein Analysis

522

Amino Acids

59.88

Weight (kDa)

8.12

Isoelectric Point (pI)

41.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 47 - 505 1.8e-112 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000143)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G76710 AT1G76710 AT1G76710 AT1G76710
fragaria_vesca FvH4_1g20063 FvH4_2g15231 FvH4_3g04011 FvH4_3g28681 FvH4_4g01411 FvH4_4g10181 FvH4_4g15922 FvH4_4g16651 FvH4_4g16652 FvH4_5g13892 FvH4_5g13893 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g25511 FvH4_6g12551 FvH4_6g12552 FvH4_6g38841 FvH4_7g04391
malus_domestica MD05G1031300.v1.1 MD05G1031400.v1.1 MD05G1031500.v1.1 MD08G1164400.v1.1 MD10G1032900.v1.1 MD10G1033000.v1.1 MD10G1033100.v1.1
prunus_persica Prupe.3G240700_v2.0.a1 Prupe.7G144600_v2.0.a1 Prupe.8G038500_v2.0.a1 Prupe.8G038500_v2.0.a1
pyrus_communis pycom05g02250 pycom05g02260 pycom05g02270 pycom05g02280 pycom08g14160 pycom10g02100 pycom10g02110 pycom10g02130
rosa_chinensis RchiOBHm_Chr1g0329481 RchiOBHm_Chr1g0329491 RchiOBHm_Chr1g0341531 RchiOBHm_Chr3g0464811 RchiOBHm_Chr3g0494701 RchiOBHm_Chr3g0497501 RchiOBHm_Chr4g0385841 RchiOBHm_Chr5g0061181 RchiOBHm_Chr6g0263001 RchiOBHm_Chr7g0193111 RchiOBHm_Chr7g0206281 RchiOBHm_Chr7g0206311
rosa_laevigata RLG00000018908 RLG00000028528 RLG00000028803 RLG00000029882 RLG00000029883 RLG00000030361
rosa_multiflora Rmu_co8196328.1_g000001 Rmu_co8259135.1_g000001 Rmu_co8269185.1_g000001 Rmu_sc0000076.1_g000019 Rmu_sc0000311.1_g000007 Rmu_sc0000429.1_g000038 Rmu_sc0000429.1_g000039 Rmu_sc0000429.1_g000040 Rmu_sc0000511.1_g000005 Rmu_sc0000539.1_g000054 Rmu_sc0000566.1_g000039 Rmu_sc0000805.1_g000032 Rmu_sc0000870.1_g000073 Rmu_sc0000870.1_g000074 Rmu_sc0001010.1_g000018 Rmu_sc0001083.1_g000013 Rmu_sc0001114.1_g000011 Rmu_sc0001702.1_g000027 Rmu_sc0001779.1_g000012 Rmu_sc0002923.1_g000036 Rmu_sc0003242.1_g000011 Rmu_sc0003291.1_g000036 Rmu_sc0003393.1_g000012 Rmu_sc0003872.1_g000016 Rmu_sc0003872.1_g000017 Rmu_sc0003872.1_g000018 Rmu_sc0004084.1_g000020 Rmu_sc0004386.1_g000005 Rmu_sc0004622.1_g000005 Rmu_sc0004742.1_g000021 Rmu_sc0004755.1_g000020 Rmu_sc0004805.1_g000036 Rmu_sc0005065.1_g000006 Rmu_sc0005177.1_g000004 Rmu_sc0006373.1_g000003 Rmu_sc0006373.1_g000004 Rmu_sc0007121.1_g000002 Rmu_sc0007943.1_g000003 Rmu_sc0010368.1_g000006 Rmu_sc0010543.1_g000001 Rmu_sc0012591.1_g000006 Rmu_sc0013504.1_g000009 Rmu_sc0015025.1_g000001 Rmu_sc0016170.1_g000001 Rmu_sc0017156.1_g000001 Rmu_sc0026439.1_g000001
rosa_roxburghii Rroxscaffold_175G00432280 Rroxscaffold_1G00030190 Rroxscaffold_1G00030880 Rroxscaffold_2G00090520 Rroxscaffold_3G00227940 Rroxscaffold_3G00233400 Rroxscaffold_3G00238500 Rroxscaffold_3G00251650 Rroxscaffold_4G00301570 Rroxscaffold_4G00321040 Rroxscaffold_5G00350880 Rroxscaffold_7G00184400
rosa_rugosa Rorug01G0080800 Rorug01G0080900 Rorug01G0193900 Rorug02G0275900 Rorug02G0275900 Rorug02G0275900 Rorug02G0305400 Rorug02G0311800 Rorug02G0350400 Rorug02G0381300 Rorug03G0136700 Rorug03G0181900 Rorug03G0268000 Rorug04G0301600 Rorug05G0175100 Rorug05G0250700 Rorug05G0298200 Rorug05G0596000 Rorug06G0029500 Rorug07G0094300 Rorug07G0094300 Rorug07G0095400 Rorug07G0140100
rosa_samantha Rh1AG099200 Rh1AG190500 Rh1BG078900 Rh1BG079000 Rh1BG079100 Rh1CG084600 Rh1CG084700 Rh1CG095300 Rh1CG175900 Rh1DG103300 Rh1DG150400 Rh2AG079300 Rh2AG272400 Rh2AG464800 Rh2AG507400 Rh2DG078300 Rh2DG078400 Rh3CG206900 Rh3CG295400 Rh3DG206800 Rh3DG356200 Rh4CG071500 Rh4CG179200 Rh4DG064700 Rh5CG362400 Rh7AG212300 Rh7AG226200 Rh7BG222200
rosa_wichuraiana Rw0G009990 Rw0G011260 Rw0G011270 Rw0G012910 Rw0G013740 Rw1G007740 Rw1G013050 Rw1G014230 Rw2G014270 Rw3G012720 Rw3G028110 Rw4G006630 Rw4G015270 Rw4G016160 Rw4G031380 Rw5G011440 Rw5G029180 Rw5G048360 Rw5G048430 Rw5G048780 Rw6G005250 Rw6G006390 Rw7G002840 Rw7G014080 Rw7G019650 Rw7G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 341, 449
Acc36I ACCTGC 1 cut(s) 753
AccB1I GGYRCC 1 cut(s) 257
AccI GTMKAC 2 cut(s) 5, 284
AccII CGCG 1 cut(s) 332
AclI AACGTT 1 cut(s) 597
AclWI GGATC 4 cut(s) 412, 524, 783, 1336
AcoI YGGCCR 3 cut(s) 118, 127, 294
AcsI RAATTY 1 cut(s) 1466
AcuI CTGAAG 1 cut(s) 752
AcyI GRCGYC 2 cut(s) 427, 476
AfaI GTAC 4 cut(s) 26, 38, 230, 1185
AfiI CCNNNNNNNGG 3 cut(s) 167, 436, 1435
AflIII ACRYGT 3 cut(s) 174, 444, 1284
AgsI TTSAA 5 cut(s) 46, 310, 595, 757, 893
AhdI GACNNNNNGTC 2 cut(s) 475, 508
AjiI CACGTC 1 cut(s) 1285
AjnI CCWGG 2 cut(s) 151, 609
AluBI AGCT 3 cut(s) 1024, 1066, 1379
AluI AGCT 3 cut(s) 1024, 1066, 1379
Alw21I GWGCWC 1 cut(s) 1068
Alw26I GTCTC 5 cut(s) 418, 805, 1269, 1378, 1484
AlwI GGATC 4 cut(s) 412, 524, 783, 1336
Ama87I CYCGRG 1 cut(s) 926
AoxI GGCC 8 cut(s) 118, 127, 145, 158, 294, 387, 635, 1053
ApaI GGGCCC 1 cut(s) 639
ApeKI GCWGC 1 cut(s) 996
ApoI RAATTY 1 cut(s) 1466
ArsI GACNNNNNNTTYG 2 cut(s) 311, 343
AspLEI GCGC 2 cut(s) 497, 822
AspS9I GGNCC 6 cut(s) 146, 159, 233, 334, 635, 636
AsuC2I CCSGG 2 cut(s) 144, 668
AsuHPI GGTGA 2 cut(s) 1009, 1442
AvaI CYCGRG 1 cut(s) 926
AvaII GGWCC 2 cut(s) 233, 334
BaeGI GKGCMC 2 cut(s) 639, 1015
BanI GGYRCC 1 cut(s) 257
BanII GRGCYC 2 cut(s) 639, 1068
Bbv12I GWGCWC 1 cut(s) 1068
BbvI GCAGC 1 cut(s) 1008
BccI CCATC 8 cut(s) 13, 138, 150, 265, 649, 679, 832, 1466
BceAI ACGGC 3 cut(s) 142, 342, 489
BciT130I CCWGG 2 cut(s) 153, 611
BciVI GTATCC 1 cut(s) 1214
BclI TGATCA 2 cut(s) 93, 937
BcnI CCSGG 2 cut(s) 144, 668
BcoDI GTCTC 5 cut(s) 418, 805, 1269, 1378, 1484
BfaI CTAG 3 cut(s) 1181, 1485, 1547
BfuAI ACCTGC 1 cut(s) 753
BfuI GTATCC 1 cut(s) 1214
BglI GCCNNNNNGGC 1 cut(s) 126
BisI GCNGC 2 cut(s) 294, 997
BlsI GCNGC 2 cut(s) 295, 998
BmcAI AGTACT 1 cut(s) 26
Bme1390I CCNGG 4 cut(s) 144, 153, 611, 668
Bme18I GGWCC 2 cut(s) 233, 334
BmeRI GACNNNNNGTC 2 cut(s) 475, 508
BmeT110I CYCGRG 1 cut(s) 926
BmgBI CACGTC 1 cut(s) 1285
BmgT120I GGNCC 6 cut(s) 146, 159, 233, 334, 635, 636
BmiI GGNNCC 4 cut(s) 259, 608, 636, 637
BmrFI CCNGG 4 cut(s) 144, 153, 611, 668
BmrI ACTGGG 1 cut(s) 37
BmsI GCATC 3 cut(s) 471, 862, 1171
BmuI ACTGGG 1 cut(s) 37
BplI GAGNNNNNCTC 2 cut(s) 785, 817
BpmI CTGGAG 3 cut(s) 124, 135, 812
BpuMI CCSGG 2 cut(s) 144, 668
BsaBI GATNNNNATC 1 cut(s) 942
BsaHI GRCGYC 2 cut(s) 427, 476
BsaI GGTCTC 1 cut(s) 1269
BsaJI CCNNGG 1 cut(s) 725
BsaWI WCCGGW 1 cut(s) 235
BsaXI ACNNNNNCTCC 2 cut(s) 549, 579
Bsc4I CCNNNNNNNGG 3 cut(s) 167, 436, 1435
Bse1I ACTGG 5 cut(s) 32, 107, 416, 966, 1505
Bse3DI GCAATG 2 cut(s) 198, 1203
Bse8I GATNNNNATC 1 cut(s) 942
BseBI CCWGG 2 cut(s) 153, 611
BseDI CCNNGG 1 cut(s) 725
BseGI GGATG 4 cut(s) 161, 660, 886, 1162
BseJI GATNNNNATC 1 cut(s) 942
BseLI CCNNNNNNNGG 3 cut(s) 167, 436, 1435
BseMI GCAATG 2 cut(s) 198, 1203
BseMII CTCAG 1 cut(s) 1305
BseNI ACTGG 5 cut(s) 32, 107, 416, 966, 1505
BseSI GKGCMC 2 cut(s) 639, 1015
BseX3I CGGCCG 1 cut(s) 118
BseXI GCAGC 1 cut(s) 1008
BseYI CCCAGC 1 cut(s) 1379
BsgI GTGCAG 1 cut(s) 867
Bsh1236I CGCG 1 cut(s) 332
Bsh1285I CGRYCG 1 cut(s) 121
BshFI GGCC 8 cut(s) 120, 129, 147, 160, 296, 389, 637, 1055
BshNI GGYRCC 1 cut(s) 257
BsiEI CGRYCG 1 cut(s) 121
BsiHKAI GWGCWC 1 cut(s) 1068
BsiHKCI CYCGRG 1 cut(s) 926
BsiSI CCGG 5 cut(s) 117, 144, 236, 487, 667
BslFI GGGAC 1 cut(s) 638
BslI CCNNNNNNNGG 3 cut(s) 167, 436, 1435
BsmAI GTCTC 5 cut(s) 418, 805, 1269, 1378, 1484
BsmBI CGTCTC 2 cut(s) 418, 1378
BsmFI GGGAC 1 cut(s) 638
BsnI GGCC 8 cut(s) 120, 129, 147, 160, 296, 389, 637, 1055
Bso31I GGTCTC 1 cut(s) 1269
BsoBI CYCGRG 1 cut(s) 926
Bsp120I GGGCCC 1 cut(s) 635
Bsp1286I GDGCHC 3 cut(s) 639, 1015, 1068
Bsp143I GATC 8 cut(s) 93, 107, 404, 516, 775, 937, 1095, 1328
BspANI GGCC 8 cut(s) 120, 129, 147, 160, 296, 389, 637, 1055
BspCNI CTCAG 1 cut(s) 1306
BspFNI CGCG 1 cut(s) 332
BspHI TCATGA 1 cut(s) 585
BspLI GGNNCC 4 cut(s) 259, 608, 636, 637
BspMI ACCTGC 1 cut(s) 753
BspPI GGATC 4 cut(s) 412, 524, 783, 1336
BspT107I GGYRCC 1 cut(s) 257
BspTNI GGTCTC 1 cut(s) 1269
BsrDI GCAATG 2 cut(s) 198, 1203
BsrI ACTGG 5 cut(s) 32, 107, 416, 966, 1505
BssECI CCNNGG 1 cut(s) 725
BssMI GATC 8 cut(s) 93, 107, 404, 516, 775, 937, 1095, 1328
BssNI GRCGYC 2 cut(s) 427, 476
Bst2UI CCWGG 2 cut(s) 153, 611
Bst4CI ACNGT 5 cut(s) 233, 282, 343, 439, 1210
Bst6I CTCTTC 8 cut(s) 60, 84, 89, 516, 752, 764, 1095, 1267
BstACI GRCGYC 2 cut(s) 427, 476
BstC8I GCNNGC 2 cut(s) 387, 702
BstDEI CTNAG 3 cut(s) 218, 248, 1314
BstDSI CCRYGG 1 cut(s) 725
BstF5I GGATG 4 cut(s) 161, 660, 886, 1162
BstFNI CGCG 1 cut(s) 332
BstHHI GCGC 2 cut(s) 497, 822
BstKTI GATC 8 cut(s) 96, 110, 407, 519, 778, 940, 1098, 1331
BstMAI GTCTC 5 cut(s) 418, 805, 1269, 1378, 1484
BstMBI GATC 8 cut(s) 93, 107, 404, 516, 775, 937, 1095, 1328
BstMCI CGRYCG 1 cut(s) 121
BstMWI GCNNNNNNNGC 5 cut(s) 126, 492, 710, 736, 745
BstNI CCWGG 2 cut(s) 153, 611
BstNSI RCATGY 3 cut(s) 178, 448, 704
BstSCI CCNGG 4 cut(s) 142, 151, 609, 666
BstSLI GKGCMC 2 cut(s) 639, 1015
BstUI CGCG 1 cut(s) 332
BstV1I GCAGC 1 cut(s) 1008
BstX2I RGATCY 2 cut(s) 404, 775
BstXI CCANNNNNNTGG 1 cut(s) 1287
BstYI RGATCY 2 cut(s) 404, 775
BstZI CGGCCG 1 cut(s) 118
BsuI GTATCC 1 cut(s) 1214
BsuRI GGCC 8 cut(s) 120, 129, 147, 160, 296, 389, 637, 1055
BtgI CCRYGG 1 cut(s) 725
BtrI CACGTC 1 cut(s) 1285
BtsCI GGATG 4 cut(s) 161, 660, 886, 1162
BtsI GCAGTG 1 cut(s) 1557
BtsIMutI CAGTG 5 cut(s) 100, 339, 409, 1206, 1557
BveI ACCTGC 1 cut(s) 753
Cac8I GCNNGC 2 cut(s) 387, 702
CciI TCATGA 1 cut(s) 585
CfoI GCGC 2 cut(s) 497, 822
Cfr13I GGNCC 6 cut(s) 146, 159, 233, 334, 635, 636
CpoI CGGWCCG 2 cut(s) 233, 334
CseI GACGC 3 cut(s) 435, 465, 519
CsiI ACCWGGT 1 cut(s) 609
Csp6I GTAC 4 cut(s) 25, 37, 229, 1184
CspI CGGWCCG 2 cut(s) 233, 334
CviQI GTAC 4 cut(s) 25, 37, 229, 1184
DdeI CTNAG 3 cut(s) 218, 248, 1314
DpnI GATC 8 cut(s) 95, 109, 406, 518, 777, 939, 1097, 1330
DpnII GATC 8 cut(s) 93, 107, 404, 516, 775, 937, 1095, 1328
DrdI GACNNNNNNGTC 2 cut(s) 341, 449
DriI GACNNNNNGTC 2 cut(s) 475, 508
DseDI GACNNNNNNGTC 2 cut(s) 341, 449
EaeI YGGCCR 3 cut(s) 118, 127, 294
EagI CGGCCG 1 cut(s) 118
Eam1104I CTCTTC 8 cut(s) 60, 84, 89, 516, 752, 764, 1095, 1267
Eam1105I GACNNNNNGTC 2 cut(s) 475, 508
EarI CTCTTC 8 cut(s) 60, 84, 89, 516, 752, 764, 1095, 1267
EciI GGCGGA 1 cut(s) 1155
Ecl136II GAGCTC 1 cut(s) 1066
EclXI CGGCCG 1 cut(s) 118
Eco24I GRGCYC 2 cut(s) 639, 1068
Eco31I GGTCTC 1 cut(s) 1269
Eco47I GGWCC 2 cut(s) 233, 334
Eco52I CGGCCG 1 cut(s) 118
Eco53kI GAGCTC 1 cut(s) 1066
Eco57I CTGAAG 1 cut(s) 752
Eco88I CYCGRG 1 cut(s) 926
EcoICRI GAGCTC 1 cut(s) 1066
EcoO109I RGGNCCY 1 cut(s) 635
EcoRII CCWGG 2 cut(s) 151, 609
EcoT38I GRGCYC 2 cut(s) 639, 1068
Esp3I CGTCTC 2 cut(s) 418, 1378
FaqI GGGAC 1 cut(s) 638
FauI CCCGC 3 cut(s) 408, 970, 1390
FbaI TGATCA 2 cut(s) 93, 937
FblI GTMKAC 2 cut(s) 5, 284
Fnu4HI GCNGC 2 cut(s) 294, 997
FokI GGATG 4 cut(s) 168, 667, 893, 1149
FriOI GRGCYC 2 cut(s) 639, 1068
Fsp4HI GCNGC 2 cut(s) 294, 997
FspBI CTAG 3 cut(s) 1181, 1485, 1547
GlaI GCGC 2 cut(s) 496, 821
GluI GCNGC 2 cut(s) 294, 997
GsaI CCCAGC 1 cut(s) 1383
GsuI CTGGAG 3 cut(s) 124, 135, 812
HaeIII GGCC 8 cut(s) 120, 129, 147, 160, 296, 389, 637, 1055
HapII CCGG 5 cut(s) 117, 144, 236, 487, 667
HgaI GACGC 3 cut(s) 435, 465, 519
HhaI GCGC 2 cut(s) 497, 822
Hin1I GRCGYC 2 cut(s) 427, 476
Hin6I GCGC 2 cut(s) 495, 820
HinP1I GCGC 2 cut(s) 495, 820
HincII GTYRAC 3 cut(s) 6, 12, 454
HindII GTYRAC 3 cut(s) 6, 12, 454
HinfI GANTC 4 cut(s) 50, 252, 1105, 1366
HpaII CCGG 5 cut(s) 117, 144, 236, 487, 667
HphI GGTGA 2 cut(s) 1009, 1442
Hpy166II GTNNAC 5 cut(s) 6, 12, 285, 442, 454
Hpy188I TCNGA 6 cut(s) 188, 646, 858, 937, 985, 1063
Hpy188III TCNNGA 3 cut(s) 586, 604, 791
Hpy8I GTNNAC 5 cut(s) 6, 12, 285, 442, 454
Hpy99I CGWCG 7 cut(s) 10, 503, 535, 538, 541, 544, 547
HpyAV CCTTC 4 cut(s) 644, 808, 896, 1045
HpyCH4III ACNGT 5 cut(s) 233, 282, 343, 439, 1210
HpyCH4IV ACGT 5 cut(s) 8, 571, 590, 597, 1284
HpyF10VI GCNNNNNNNGC 5 cut(s) 126, 492, 710, 736, 745
HpyF3I CTNAG 3 cut(s) 218, 248, 1314
HpySE526I ACGT 5 cut(s) 8, 571, 590, 597, 1284
Hsp92I GRCGYC 2 cut(s) 427, 476
HspAI GCGC 2 cut(s) 495, 820
Ksp22I TGATCA 2 cut(s) 93, 937
Kzo9I GATC 8 cut(s) 93, 107, 404, 516, 775, 937, 1095, 1328
LmnI GCTCC 3 cut(s) 188, 817, 1376
Lsp1109I GCAGC 1 cut(s) 1008
LweI GCATC 3 cut(s) 471, 862, 1171
MabI ACCWGGT 1 cut(s) 609
MaeI CTAG 3 cut(s) 1181, 1485, 1547
MaeII ACGT 5 cut(s) 8, 571, 590, 597, 1284
MaeIII GTNAC 3 cut(s) 1106, 1292, 1443
MalI GATC 8 cut(s) 95, 109, 406, 518, 777, 939, 1097, 1330
MboI GATC 8 cut(s) 93, 107, 404, 516, 775, 937, 1095, 1328
MflI RGATCY 2 cut(s) 404, 775
MhlI GDGCHC 3 cut(s) 639, 1015, 1068
MluCI AATT 3 cut(s) 1335, 1454, 1466
MlyI GAGTC 3 cut(s) 44, 246, 1114
MmeI TCCRAC 1 cut(s) 166
MseI TTAA 2 cut(s) 1308, 1567
MspI CCGG 5 cut(s) 117, 144, 236, 487, 667
MspR9I CCNGG 4 cut(s) 144, 153, 611, 668
MvaI CCWGG 2 cut(s) 153, 611
MvnI CGCG 1 cut(s) 332
MwoI GCNNNNNNNGC 5 cut(s) 126, 492, 710, 736, 745
NciI CCSGG 2 cut(s) 144, 668
NdeII GATC 8 cut(s) 93, 107, 404, 516, 775, 937, 1095, 1328
NlaIV GGNNCC 4 cut(s) 259, 608, 636, 637
NmuCI GTSAC 2 cut(s) 1106, 1292
NspI RCATGY 3 cut(s) 178, 448, 704
PaeI GCATGC 1 cut(s) 704
PagI TCATGA 1 cut(s) 585
PciI ACATGT 2 cut(s) 174, 444
PcsI WCGNNNNNNNCGW 2 cut(s) 539, 542
PfeI GAWTC 1 cut(s) 1366
PfoI TCCNGGA 1 cut(s) 151
PkrI GCNGC 2 cut(s) 295, 998
PleI GAGTC 3 cut(s) 44, 246, 1113
PpsI GAGTC 3 cut(s) 44, 246, 1113
PscI ACATGT 2 cut(s) 174, 444
Psp124BI GAGCTC 1 cut(s) 1068
Psp1406I AACGTT 1 cut(s) 597
Psp6I CCWGG 2 cut(s) 151, 609
PspFI CCCAGC 1 cut(s) 1379
PspGI CCWGG 2 cut(s) 151, 609
PspN4I GGNNCC 4 cut(s) 259, 608, 636, 637
PspOMI GGGCCC 1 cut(s) 635
PspPI GGNCC 6 cut(s) 146, 159, 233, 334, 635, 636
PsuI RGATCY 2 cut(s) 404, 775
RsaI GTAC 4 cut(s) 26, 38, 230, 1185
RsaNI GTAC 4 cut(s) 25, 37, 229, 1184
Rsr2I CGGWCCG 2 cut(s) 233, 334
RsrII CGGWCCG 2 cut(s) 233, 334
SacI GAGCTC 1 cut(s) 1068
SalI GTCGAC 1 cut(s) 4
SaqAI TTAA 2 cut(s) 1308, 1567
SatI GCNGC 2 cut(s) 294, 997
Sau3AI GATC 8 cut(s) 93, 107, 404, 516, 775, 937, 1095, 1328
Sau96I GGNCC 6 cut(s) 146, 159, 233, 334, 635, 636
ScaI AGTACT 1 cut(s) 26
SchI GAGTC 3 cut(s) 44, 246, 1114
ScrFI CCNGG 4 cut(s) 144, 153, 611, 668
SduI GDGCHC 3 cut(s) 639, 1015, 1068
SexAI ACCWGGT 1 cut(s) 609
SfaNI GCATC 3 cut(s) 471, 862, 1171
SfiI GGCCNNNNNGGCC 1 cut(s) 126
SinI GGWCC 2 cut(s) 233, 334
SphI GCATGC 1 cut(s) 704
Sse9I AATT 3 cut(s) 1335, 1454, 1466
SspI AATATT 1 cut(s) 969
SspMI CTAG 3 cut(s) 1181, 1485, 1547
SstI GAGCTC 1 cut(s) 1068
StyD4I CCNGG 4 cut(s) 142, 151, 609, 666
TaaI ACNGT 5 cut(s) 233, 282, 343, 439, 1210
TaiI ACGT 5 cut(s) 11, 574, 593, 600, 1287
TaqI TCGA 6 cut(s) 5, 519, 620, 1084, 1098, 1226
TasI AATT 3 cut(s) 1335, 1454, 1466
TatI WGTACW 1 cut(s) 24
TauI GCSGC 1 cut(s) 296
TfiI GAWTC 1 cut(s) 1366
Tru1I TTAA 2 cut(s) 1308, 1567
Tru9I TTAA 2 cut(s) 1308, 1567
TscAI CASTG 5 cut(s) 107, 346, 416, 1213, 1557
TseFI GTSAC 2 cut(s) 1106, 1292
TseI GCWGC 1 cut(s) 996
Tsp45I GTSAC 2 cut(s) 1106, 1292
TspDTI ATGAA 8 cut(s) 363, 782, 839, 933, 946, 1064, 1312, 1521
TspGWI ACGGA 2 cut(s) 417, 714
TspRI CASTG 5 cut(s) 107, 346, 416, 1213, 1557
VpaK11BI GGWCC 2 cut(s) 233, 334
XapI RAATTY 1 cut(s) 1466
XceI RCATGY 3 cut(s) 178, 448, 704
XcmI CCANNNNNNNNNTGG 1 cut(s) 268
XmiI GTMKAC 2 cut(s) 5, 284
XspI CTAG 3 cut(s) 1181, 1485, 1547
ZrmI AGTACT 1 cut(s) 26
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.