Rw6G005250

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000143
Physical Location & Seq
Reverse (-)
8460834 .. 8464474
3641 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G005250.1

Sequence Viewer

Length: 1977 bp
ATGGAAGAAGAGCCCGGGCATGCTGAGTTGCAAAAGATTCCTATAAATTTGGTGCCCTCAGATGATAGCGAAGAGTTACAGTTTAATCATCCGTCTAGAGATCAAACAATGATTGATGTTTCAAATGAATTTCTCTCATTGTCGACTAATTTTTTTGAAAATCGAGAAGACCTTATTGCTGCAGTTCGTAAGATTGGGTTGGTGCAAGGGTATGTTTTGGTAATCAAAAGATCTAAAACCAATAGATATGTGGTTATTGGTTGTGATAGAGGTGGTTGTTACCGAACTGCAGTTGCACCTGAGAACAAGAAAAATAATTCATCTTCTCGTTTGATAAACTGTCCTTTTAAAATTTTGGGAAAAAGGACAGCTGAAGGGTTGTGGAAGGCAGTGATAGATAGTTTGTTACATAACCATGAGCCTTCCACTGACATGGTTGGACATCCCTATTGTCGTCCATTTACTGAAGAGGAAGCCTTACAAGTTAAACAAATGAGTAGGGCTGGCATAAAACCACGCCAAATTCTCTCTTCACTTCGACAAAATAACCCTGAGCTTCTAGCTGTTTCCAGAAATATATATAGCAAAACAGCTCAATTTAGGAGGGAAAGTCTAGATGGGCGTTCAGTTATTCAAGCATTATTGGATGAGCTTGGTGGTGCTGGTTTTTCTCATAATGTTAAGTATGATAATTGTGGTCAGTTGACTCATCTATTCTTTGCTCATCCCATTTCCATTGAGTTGACCAAAAGCTACCCTAATGTCTTTGTGATGGATTGTACTTATAAAACAAATAAGTACAAGATGCCATTACTTGAGATTGTTGGAGTGACGAGCGTCAACAAATCATTTTATTCATGTTTTGTTTTCATGCAAAAAGAAGAACAAGAAGATTATGAGTGGGCCCTTGAAATGTTCAGTAAGTTATTAGGTTTTGGTAGTCGTCCATTGGCGATAATAACTGATAGGGAGTTGGCGTTAATGAAAGCAATACAAGTTGTGTTCCCGATGACTTTTAATCTGATCTGCATATGGCATATTGAGAAAAATATTCTTGCACATTGTAAGGGTCAGTTTAAAGAAGATACAGATTGGGTTGCTTTTATATCTTCTTGGACCACCTTAGTACAATCTTGGGACGTGCCAACATTTAATGAAGCTTGGAATCGTTTTCAAATTGAGTACAAAGACTATGCTTCAGTTCTGACTTACATTGGAAATACTTGGCTTCCATGGAAAGAGAGGTTTGTATTTGCATGGACAGGGCAAATTTCACATTTTGGTAATAATGTTACTTCTAGGGCAGAAGGTGCACATGCAACCTTAAAGAAATATCTTCAAGTTTCAACTGGTGGTCTTCGTGAAGTGAAGGAAAATATTTGTCTTGCCATTGAAAATCAATTTCAGGAAATTAAAACACAACTTGCAAGTGAAAAGATTCGTGTTCCTCAAAAGCTTTGCATCCCTTTCTTTAAAGAGGTTGTTCATAAGGTCTCTTTCTATGCTTTGTATGAGTTACAAAAGCAATACTTGTTGGCAAATACCAAAGACTATTCATCTCAATGTAAGAGCCAATTTTCCAAAACCATGGGTCTTCCGTGTGTGCACATGATCAAGGAGATGAATATTGAAGTGCTGCCTCTAAATCAAATTCATATGCAATGGAGAATTGACACAAGATCTTTCACTAATGATCATCATGCAAGCTTGGATCATGAAGATCCTTTAACTGCTCTTTTATCTGAGATTAAAGAGAAGTATGAAAAACAGCCGATTATGCAAAACGAAAATACCATAAGGCAGCTTTCTCAAGTACTTGGTGCATCTTGTCCCTTAATTTTTGAACCTACTATTCAGCCTCATAAAGGTCGTCCGGTAGGATCAAATAAAAGAAAGGAAATTAGCTCTACAAAGCGGGAACCTTCACATTTTGAGATAGTAGAGAAGACTCCTCGAAAATGTAGTGGTTATGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE

Protein Analysis

658

Amino Acids

75.65

Weight (kDa)

8.34

Isoelectric Point (pI)

48.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ZSWIM1-3_RNaseH-like PF21056 227 - 338 1.2e-12 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE PF10551 255 - 350 3.1e-25 MULE transposase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000143)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G76710 AT1G76710 AT1G76710 AT1G76710
fragaria_vesca FvH4_1g20063 FvH4_2g15231 FvH4_3g04011 FvH4_3g28681 FvH4_4g01411 FvH4_4g10181 FvH4_4g15922 FvH4_4g16651 FvH4_4g16652 FvH4_5g13892 FvH4_5g13893 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g25511 FvH4_6g12551 FvH4_6g12552 FvH4_6g38841 FvH4_7g04391
malus_domestica MD05G1031300.v1.1 MD05G1031400.v1.1 MD05G1031500.v1.1 MD08G1164400.v1.1 MD10G1032900.v1.1 MD10G1033000.v1.1 MD10G1033100.v1.1
prunus_persica Prupe.3G240700_v2.0.a1 Prupe.7G144600_v2.0.a1 Prupe.8G038500_v2.0.a1 Prupe.8G038500_v2.0.a1
pyrus_communis pycom05g02250 pycom05g02260 pycom05g02270 pycom05g02280 pycom08g14160 pycom10g02100 pycom10g02110 pycom10g02130
rosa_chinensis RchiOBHm_Chr1g0329481 RchiOBHm_Chr1g0329491 RchiOBHm_Chr1g0341531 RchiOBHm_Chr3g0464811 RchiOBHm_Chr3g0494701 RchiOBHm_Chr3g0497501 RchiOBHm_Chr4g0385841 RchiOBHm_Chr5g0061181 RchiOBHm_Chr6g0263001 RchiOBHm_Chr7g0193111 RchiOBHm_Chr7g0206281 RchiOBHm_Chr7g0206311
rosa_laevigata RLG00000018908 RLG00000028528 RLG00000028803 RLG00000029882 RLG00000029883 RLG00000030361
rosa_multiflora Rmu_co8196328.1_g000001 Rmu_co8259135.1_g000001 Rmu_co8269185.1_g000001 Rmu_sc0000076.1_g000019 Rmu_sc0000311.1_g000007 Rmu_sc0000429.1_g000038 Rmu_sc0000429.1_g000039 Rmu_sc0000429.1_g000040 Rmu_sc0000511.1_g000005 Rmu_sc0000539.1_g000054 Rmu_sc0000566.1_g000039 Rmu_sc0000805.1_g000032 Rmu_sc0000870.1_g000073 Rmu_sc0000870.1_g000074 Rmu_sc0001010.1_g000018 Rmu_sc0001083.1_g000013 Rmu_sc0001114.1_g000011 Rmu_sc0001702.1_g000027 Rmu_sc0001779.1_g000012 Rmu_sc0002923.1_g000036 Rmu_sc0003242.1_g000011 Rmu_sc0003291.1_g000036 Rmu_sc0003393.1_g000012 Rmu_sc0003872.1_g000016 Rmu_sc0003872.1_g000017 Rmu_sc0003872.1_g000018 Rmu_sc0004084.1_g000020 Rmu_sc0004386.1_g000005 Rmu_sc0004622.1_g000005 Rmu_sc0004742.1_g000021 Rmu_sc0004755.1_g000020 Rmu_sc0004805.1_g000036 Rmu_sc0005065.1_g000006 Rmu_sc0005177.1_g000004 Rmu_sc0006373.1_g000003 Rmu_sc0006373.1_g000004 Rmu_sc0007121.1_g000002 Rmu_sc0007943.1_g000003 Rmu_sc0010368.1_g000006 Rmu_sc0010543.1_g000001 Rmu_sc0012591.1_g000006 Rmu_sc0013504.1_g000009 Rmu_sc0015025.1_g000001 Rmu_sc0016170.1_g000001 Rmu_sc0017156.1_g000001 Rmu_sc0026439.1_g000001
rosa_roxburghii Rroxscaffold_175G00432280 Rroxscaffold_1G00030190 Rroxscaffold_1G00030880 Rroxscaffold_2G00090520 Rroxscaffold_3G00227940 Rroxscaffold_3G00233400 Rroxscaffold_3G00238500 Rroxscaffold_3G00251650 Rroxscaffold_4G00301570 Rroxscaffold_4G00321040 Rroxscaffold_5G00350880 Rroxscaffold_7G00184400
rosa_rugosa Rorug01G0080800 Rorug01G0080900 Rorug01G0193900 Rorug02G0275900 Rorug02G0275900 Rorug02G0275900 Rorug02G0305400 Rorug02G0311800 Rorug02G0350400 Rorug02G0381300 Rorug03G0136700 Rorug03G0181900 Rorug03G0268000 Rorug04G0301600 Rorug05G0175100 Rorug05G0250700 Rorug05G0298200 Rorug05G0596000 Rorug06G0029500 Rorug07G0094300 Rorug07G0094300 Rorug07G0095400 Rorug07G0140100
rosa_samantha Rh1AG099200 Rh1AG190500 Rh1BG078900 Rh1BG079000 Rh1BG079100 Rh1CG084600 Rh1CG084700 Rh1CG095300 Rh1CG175900 Rh1DG103300 Rh1DG150400 Rh2AG079300 Rh2AG272400 Rh2AG464800 Rh2AG507400 Rh2DG078300 Rh2DG078400 Rh3CG206900 Rh3CG295400 Rh3DG206800 Rh3DG356200 Rh4CG071500 Rh4CG179200 Rh4DG064700 Rh5CG362400 Rh7AG212300 Rh7AG226200 Rh7BG222200
rosa_wichuraiana Rw0G009990 Rw0G011260 Rw0G011270 Rw0G012910 Rw0G013740 Rw1G007740 Rw1G013050 Rw1G014230 Rw2G014270 Rw3G012720 Rw3G028110 Rw4G006630 Rw4G015270 Rw4G016160 Rw4G031380 Rw5G011440 Rw5G029180 Rw5G048360 Rw5G048430 Rw5G048780 Rw6G005250 Rw6G006390 Rw7G002840 Rw7G014080 Rw7G019650 Rw7G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 786
AccB1I GGYRCC 1 cut(s) 52
AccI GTMKAC 1 cut(s) 143
AciI CCGC 1 cut(s) 1915
AclWI GGATC 3 cut(s) 1715, 1719, 1888
AcsI RAATTY 6 cut(s) 46, 128, 351, 522, 1269, 1650
AcuI CTGAAG 3 cut(s) 393, 486, 1182
AfaI GTAC 5 cut(s) 781, 800, 1128, 1184, 1815
AfiI CCNNNNNNNGG 1 cut(s) 1865
AjiI CACGTC 1 cut(s) 1141
Alw21I GWGCWC 2 cut(s) 1315, 1608
Alw26I GTCTC 1 cut(s) 1498
Alw44I GTGCAC 2 cut(s) 1311, 1604
AlwI GGATC 3 cut(s) 1715, 1719, 1888
Ama87I CYCGRG 1 cut(s) 14
AoxI GGCC 1 cut(s) 903
ApaI GGGCCC 1 cut(s) 907
ApaLI GTGCAC 2 cut(s) 1311, 1604
ApeKI GCWGC 3 cut(s) 179, 1636, 1801
ApoI RAATTY 6 cut(s) 46, 128, 351, 522, 1269, 1650
Asp700I GAANNNNTTC 1 cut(s) 1437
AspS9I GGNCC 3 cut(s) 903, 904, 1116
AsuC2I CCSGG 2 cut(s) 15, 16
AvaI CYCGRG 1 cut(s) 14
AvaII GGWCC 1 cut(s) 1116
BaeGI GKGCMC 4 cut(s) 57, 907, 1315, 1608
BanI GGYRCC 1 cut(s) 52
BanII GRGCYC 2 cut(s) 15, 907
BbsI GAAGAC 4 cut(s) 174, 1349, 1586, 1952
Bbv12I GWGCWC 2 cut(s) 1315, 1608
BbvI GCAGC 3 cut(s) 166, 1623, 1813
BccI CCATC 2 cut(s) 611, 766
BclI TGATCA 2 cut(s) 1611, 1693
BcnI CCSGG 2 cut(s) 15, 16
BcoDI GTCTC 1 cut(s) 1498
BfaI CTAG 4 cut(s) 96, 560, 614, 1299
BfmI CTRYAG 2 cut(s) 180, 288
BglII AGATCT 2 cut(s) 230, 1679
BisI GCNGC 3 cut(s) 180, 1637, 1802
BlsI GCNGC 3 cut(s) 181, 1638, 1803
BmcAI AGTACT 1 cut(s) 1815
Bme1390I CCNGG 2 cut(s) 15, 16
Bme18I GGWCC 1 cut(s) 1116
BmeT110I CYCGRG 1 cut(s) 14
BmgBI CACGTC 1 cut(s) 1141
BmgT120I GGNCC 3 cut(s) 903, 904, 1116
BmiI GGNNCC 3 cut(s) 54, 905, 1920
BmrFI CCNGG 2 cut(s) 15, 16
BmsI GCATC 3 cut(s) 795, 1470, 1832
BoxI GACNNNNGTC 1 cut(s) 836
BpiI GAAGAC 4 cut(s) 174, 1349, 1586, 1952
Bpu10I CCTNAGC 1 cut(s) 552
BpuEI CTTGAG 2 cut(s) 836, 1794
BpuMI CCSGG 2 cut(s) 15, 16
BsaI GGTCTC 1 cut(s) 1498
BsaJI CCNNGG 3 cut(s) 14, 1232, 1587
BsaWI WCCGGW 1 cut(s) 1873
BsaXI ACNNNNNCTCC 4 cut(s) 595, 625, 962, 992
Bsc4I CCNNNNNNNGG 1 cut(s) 1865
Bse1I ACTGG 1 cut(s) 1354
Bse3DI GCAATG 1 cut(s) 1667
BseDI CCNNGG 3 cut(s) 14, 1232, 1587
BseGI GGATG 5 cut(s) 88, 442, 652, 724, 1461
BseLI CCNNNNNNNGG 1 cut(s) 1865
BseMI GCAATG 1 cut(s) 1667
BseMII CTCAG 5 cut(s) 15, 72, 291, 543, 1734
BseNI ACTGG 1 cut(s) 1354
BseRI GAGGAG 1 cut(s) 1941
BseSI GKGCMC 4 cut(s) 57, 907, 1315, 1608
BseXI GCAGC 3 cut(s) 166, 1623, 1813
BshFI GGCC 1 cut(s) 905
BshNI GGYRCC 1 cut(s) 52
BsiHKAI GWGCWC 2 cut(s) 1315, 1608
BsiHKCI CYCGRG 1 cut(s) 14
BsiSI CCGG 2 cut(s) 15, 1874
BslFI GGGAC 2 cut(s) 1151, 1815
BslI CCNNNNNNNGG 1 cut(s) 1865
BsmAI GTCTC 1 cut(s) 1498
BsmFI GGGAC 2 cut(s) 1151, 1815
BsnI GGCC 1 cut(s) 905
Bso31I GGTCTC 1 cut(s) 1498
BsoBI CYCGRG 1 cut(s) 14
Bsp120I GGGCCC 1 cut(s) 903
Bsp1286I GDGCHC 5 cut(s) 15, 57, 907, 1315, 1608
Bsp143I GATC 9 cut(s) 100, 230, 1023, 1611, 1679, 1693, 1711, 1720, 1880
Bsp19I CCATGG 2 cut(s) 1232, 1587
BspACI CCGC 1 cut(s) 1915
BspANI GGCC 1 cut(s) 905
BspCNI CTCAG 5 cut(s) 16, 71, 292, 544, 1735
BspHI TCATGA 1 cut(s) 1714
BspLI GGNNCC 3 cut(s) 54, 905, 1920
BspMAI CTGCAG 2 cut(s) 184, 292
BspPI GGATC 3 cut(s) 1715, 1719, 1888
BspQI GCTCTTC 1 cut(s) 3
BspT107I GGYRCC 1 cut(s) 52
BspTNI GGTCTC 1 cut(s) 1498
BsrDI GCAATG 1 cut(s) 1667
BsrI ACTGG 1 cut(s) 1354
BssECI CCNNGG 3 cut(s) 14, 1232, 1587
BssMI GATC 9 cut(s) 100, 230, 1023, 1611, 1679, 1693, 1711, 1720, 1880
BssT1I CCWWGG 2 cut(s) 1232, 1587
Bst4CI ACNGT 2 cut(s) 81, 341
Bst6I CTCTTC 4 cut(s) 3, 66, 462, 535
BstAPI GCANNNNNTGC 1 cut(s) 1310
BstC8I GCNNGC 3 cut(s) 21, 505, 1705
BstDEI CTNAG 6 cut(s) 24, 58, 300, 552, 1123, 1743
BstDSI CCRYGG 2 cut(s) 1232, 1587
BstENI CCTNNNNNAGG 1 cut(s) 1863
BstF5I GGATG 5 cut(s) 88, 442, 652, 724, 1461
BstKTI GATC 9 cut(s) 103, 233, 1026, 1614, 1682, 1696, 1714, 1723, 1883
BstMAI GTCTC 1 cut(s) 1498
BstMBI GATC 9 cut(s) 100, 230, 1023, 1611, 1679, 1693, 1711, 1720, 1880
BstMWI GCNNNNNNNGC 2 cut(s) 1310, 1777
BstNSI RCATGY 2 cut(s) 23, 1319
BstPAI GACNNNNGTC 1 cut(s) 836
BstSCI CCNGG 2 cut(s) 13, 14
BstSFI CTRYAG 2 cut(s) 180, 288
BstSLI GKGCMC 4 cut(s) 57, 907, 1315, 1608
BstV1I GCAGC 3 cut(s) 166, 1623, 1813
BstV2I GAAGAC 4 cut(s) 174, 1349, 1586, 1952
BstX2I RGATCY 3 cut(s) 230, 1679, 1720
BstXI CCANNNNNNTGG 2 cut(s) 433, 1588
BstYI RGATCY 3 cut(s) 230, 1679, 1720
BsuRI GGCC 1 cut(s) 905
BtgI CCRYGG 2 cut(s) 1232, 1587
BtrI CACGTC 1 cut(s) 1141
BtsCI GGATG 5 cut(s) 88, 442, 652, 724, 1461
BtsI GCAGTG 1 cut(s) 396
BtsIMutI CAGTG 2 cut(s) 396, 426
Cac8I GCNNGC 3 cut(s) 21, 505, 1705
CciI TCATGA 1 cut(s) 1714
Cfr13I GGNCC 3 cut(s) 903, 904, 1116
Cfr9I CCCGGG 1 cut(s) 14
CseI GACGC 1 cut(s) 826
Csp6I GTAC 5 cut(s) 780, 799, 1127, 1183, 1814
CviQI GTAC 5 cut(s) 780, 799, 1127, 1183, 1814
DdeI CTNAG 6 cut(s) 24, 58, 300, 552, 1123, 1743
DpnI GATC 9 cut(s) 102, 232, 1025, 1613, 1681, 1695, 1713, 1722, 1882
DpnII GATC 9 cut(s) 100, 230, 1023, 1611, 1679, 1693, 1711, 1720, 1880
DraI TTTAAA 3 cut(s) 349, 1078, 1474
Eam1104I CTCTTC 4 cut(s) 3, 66, 462, 535
EarI CTCTTC 4 cut(s) 3, 66, 462, 535
Eco130I CCWWGG 2 cut(s) 1232, 1587
Eco24I GRGCYC 2 cut(s) 15, 907
Eco31I GGTCTC 1 cut(s) 1498
Eco47I GGWCC 1 cut(s) 1116
Eco57I CTGAAG 3 cut(s) 393, 486, 1182
Eco88I CYCGRG 1 cut(s) 14
EcoNI CCTNNNNNAGG 1 cut(s) 1863
EcoO109I RGGNCCY 1 cut(s) 904
EcoT14I CCWWGG 2 cut(s) 1232, 1587
EcoT38I GRGCYC 2 cut(s) 15, 907
ErhI CCWWGG 2 cut(s) 1232, 1587
FalI AAGNNNNNCTT 2 cut(s) 1514, 1546
FaqI GGGAC 2 cut(s) 1151, 1815
FauI CCCGC 1 cut(s) 1908
FauNDI CATATG 2 cut(s) 1031, 1656
FbaI TGATCA 2 cut(s) 1611, 1693
FblI GTMKAC 1 cut(s) 143
Fnu4HI GCNGC 3 cut(s) 180, 1637, 1802
FokI GGATG 5 cut(s) 75, 429, 659, 711, 1448
FriOI GRGCYC 2 cut(s) 15, 907
Fsp4HI GCNGC 3 cut(s) 180, 1637, 1802
FspBI CTAG 4 cut(s) 96, 560, 614, 1299
GluI GCNGC 3 cut(s) 180, 1637, 1802
HaeIII GGCC 1 cut(s) 905
HapII CCGG 2 cut(s) 15, 1874
HgaI GACGC 1 cut(s) 826
HincII GTYRAC 4 cut(s) 144, 705, 744, 841
HindII GTYRAC 4 cut(s) 144, 705, 744, 841
HindIII AAGCTT 3 cut(s) 1158, 1454, 1705
HinfI GANTC 5 cut(s) 37, 706, 1165, 1438, 1948
HpaII CCGG 2 cut(s) 15, 1874
Hpy166II GTNNAC 6 cut(s) 144, 705, 744, 841, 1313, 1606
Hpy188I TCNGA 4 cut(s) 61, 1023, 1206, 1744
Hpy188III TCNNGA 8 cut(s) 96, 164, 570, 614, 1006, 1361, 1406, 1715
Hpy8I GTNNAC 6 cut(s) 144, 705, 744, 841, 1313, 1606
HpyAV CCTTC 6 cut(s) 368, 379, 432, 1301, 1363, 1932
HpyCH4III ACNGT 2 cut(s) 81, 341
HpyCH4IV ACGT 1 cut(s) 1140
HpyF10VI GCNNNNNNNGC 2 cut(s) 1310, 1777
HpyF3I CTNAG 6 cut(s) 24, 58, 300, 552, 1123, 1743
HpySE526I ACGT 1 cut(s) 1140
Ksp22I TGATCA 2 cut(s) 1611, 1693
Kzo9I GATC 9 cut(s) 100, 230, 1023, 1611, 1679, 1693, 1711, 1720, 1880
LguI GCTCTTC 1 cut(s) 3
Lsp1109I GCAGC 3 cut(s) 166, 1623, 1813
LweI GCATC 3 cut(s) 795, 1470, 1832
MaeI CTAG 4 cut(s) 96, 560, 614, 1299
MaeII ACGT 1 cut(s) 1140
MaeIII GTNAC 6 cut(s) 75, 278, 405, 829, 1291, 1515
MalI GATC 9 cut(s) 102, 232, 1025, 1613, 1681, 1695, 1713, 1722, 1882
MboI GATC 9 cut(s) 100, 230, 1023, 1611, 1679, 1693, 1711, 1720, 1880
MflI RGATCY 3 cut(s) 230, 1679, 1720
MhlI GDGCHC 5 cut(s) 15, 57, 907, 1315, 1608
MlyI GAGTC 2 cut(s) 700, 1942
MmeI TCCRAC 2 cut(s) 418, 805
MroXI GAANNNNTTC 1 cut(s) 1437
MslI CAYNNNNRTG 3 cut(s) 414, 431, 1561
MspA1I CMGCKG 1 cut(s) 371
MspI CCGG 2 cut(s) 15, 1874
MspR9I CCNGG 2 cut(s) 15, 16
MwoI GCNNNNNNNGC 2 cut(s) 1310, 1777
NciI CCSGG 2 cut(s) 15, 16
NcoI CCATGG 2 cut(s) 1232, 1587
NdeI CATATG 2 cut(s) 1031, 1656
NdeII GATC 9 cut(s) 100, 230, 1023, 1611, 1679, 1693, 1711, 1720, 1880
NlaIV GGNNCC 3 cut(s) 54, 905, 1920
NmuCI GTSAC 1 cut(s) 829
NspI RCATGY 2 cut(s) 23, 1319
PaeI GCATGC 1 cut(s) 23
PagI TCATGA 1 cut(s) 1714
PciSI GCTCTTC 1 cut(s) 3
PdmI GAANNNNTTC 1 cut(s) 1437
PfeI GAWTC 3 cut(s) 37, 1165, 1438
PkrI GCNGC 3 cut(s) 181, 1638, 1803
PleI GAGTC 2 cut(s) 700, 1942
PpsI GAGTC 2 cut(s) 700, 1942
PshAI GACNNNNGTC 1 cut(s) 836
PsiI TTATAA 1 cut(s) 786
PspN4I GGNNCC 3 cut(s) 54, 905, 1920
PspOMI GGGCCC 1 cut(s) 903
PspPI GGNCC 3 cut(s) 903, 904, 1116
PstI CTGCAG 2 cut(s) 184, 292
PsuI RGATCY 3 cut(s) 230, 1679, 1720
PvuII CAGCTG 1 cut(s) 371
RsaI GTAC 5 cut(s) 781, 800, 1128, 1184, 1815
RsaNI GTAC 5 cut(s) 780, 799, 1127, 1183, 1814
RseI CAYNNNNRTG 3 cut(s) 414, 431, 1561
SalI GTCGAC 1 cut(s) 142
SapI GCTCTTC 1 cut(s) 3
SatI GCNGC 3 cut(s) 180, 1637, 1802
Sau3AI GATC 9 cut(s) 100, 230, 1023, 1611, 1679, 1693, 1711, 1720, 1880
Sau96I GGNCC 3 cut(s) 903, 904, 1116
ScaI AGTACT 1 cut(s) 1815
SchI GAGTC 2 cut(s) 700, 1942
ScrFI CCNGG 2 cut(s) 15, 16
SduI GDGCHC 5 cut(s) 15, 57, 907, 1315, 1608
SfaNI GCATC 3 cut(s) 795, 1470, 1832
SfcI CTRYAG 2 cut(s) 180, 288
SinI GGWCC 1 cut(s) 1116
SmaI CCCGGG 1 cut(s) 16
SmiMI CAYNNNNRTG 3 cut(s) 414, 431, 1561
SmlI CTYRAG 2 cut(s) 815, 1809
SmoI CTYRAG 2 cut(s) 815, 1809
SphI GCATGC 1 cut(s) 23
SrfI GCCCGGGC 1 cut(s) 16
SsiI CCGC 1 cut(s) 1915
SspI AATATT 3 cut(s) 1051, 1378, 1627
SspMI CTAG 4 cut(s) 96, 560, 614, 1299
StyD4I CCNGG 2 cut(s) 13, 14
StyI CCWWGG 2 cut(s) 1232, 1587
TaaI ACNGT 2 cut(s) 81, 341
TaiI ACGT 1 cut(s) 1143
TaqI TCGA 4 cut(s) 143, 163, 538, 1954
TatI WGTACW 5 cut(s) 779, 798, 1126, 1182, 1813
TfiI GAWTC 3 cut(s) 37, 1165, 1438
TscAI CASTG 2 cut(s) 396, 433
TseFI GTSAC 1 cut(s) 829
TseI GCWGC 3 cut(s) 179, 1636, 1801
Tsp45I GTSAC 1 cut(s) 829
TspGWI ACGGA 2 cut(s) 81, 1587
TspMI CCCGGG 1 cut(s) 14
TspRI CASTG 2 cut(s) 396, 433
VneI GTGCAC 2 cut(s) 1311, 1604
VpaK11BI GGWCC 1 cut(s) 1116
XagI CCTNNNNNAGG 1 cut(s) 1863
XapI RAATTY 6 cut(s) 46, 128, 351, 522, 1269, 1650
XbaI TCTAGA 2 cut(s) 95, 613
XceI RCATGY 2 cut(s) 23, 1319
XcmI CCANNNNNNNNNTGG 1 cut(s) 247
XmaI CCCGGG 1 cut(s) 14
XmiI GTMKAC 1 cut(s) 143
XmnI GAANNNNTTC 1 cut(s) 1437
XspI CTAG 4 cut(s) 96, 560, 614, 1299
ZrmI AGTACT 1 cut(s) 1815
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.