MD05G1031500.v1.1

Histone-lysine N-methyltransferase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Forward (+)
5096096 .. 5099394
3299 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1031500.v1.1.491

Sequence Viewer

Length: 780 bp
ATGTACCATACATTGGGATGCATTTCTCCTCAAAGTTTATATTCCGTTGAGAAAATTCCGCTGTACGATTCTGCAGAGGATGAGCCTTCGTCTAGGCTTTTCAGGGCTGTGAACTCCTCAAGCTCTGAGTTTGATGTTGATGGGATGATGGAGAATGTCAATGTGGATTCTGAACATCAGTTGATGTCTACTGCTCTTGTTGTGCAATCACTTGATTCTGTTCCAATGGAAGGTGTAGTTATGGAGGTAAAAACAGAAGTGAACATGGAGAGGAAACTTTATTCAGAAGACAATCAACTGGCTATTTCAGAAAAGAATGCAATTATATCTCGTATCCGCAGTAATACTGCAGGTCGGAATTATCACATCGGATCAGGGTCCTTGTCAAACAAAAGATCAAAACAATATAATGGAAGGTTGAAACATGGTGCACAAAAGCAAGTCGACGCCAAATCTGTTGCTGCGCTTTTAGCGTCAAAGGAAGCACAAGAGGAAATTTTAAACTATGAGCGGATGAAAAACGATGCTGCCACTCATCTTGAATCTCTATACAATGAGATACGACCTGCCATTGAAGAACATGAAAGGGACAGCCAAGACAGTGTAGCTACAAGTGTAGCTGAGAAGTGGATAGAAGCTTGCTGCTTGAAACTCAAGGCAGAATTCGACCTATATTCTTCCATTGTTAAAGGCATTGCCTGCACTCCTCGAAGGCCATTTGCCGAAGCTGAACCATCTGACGGCAACACCGAGAATGAGATCAAGTACTTGCAGAATTGA

Protein Analysis

260

Amino Acids

28.96

Weight (kDa)

5.06

Isoelectric Point (pI)

62.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000143)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G76710 AT1G76710 AT1G76710 AT1G76710
fragaria_vesca FvH4_1g20063 FvH4_2g15231 FvH4_3g04011 FvH4_3g28681 FvH4_4g01411 FvH4_4g10181 FvH4_4g15922 FvH4_4g16651 FvH4_4g16652 FvH4_5g13892 FvH4_5g13893 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g25511 FvH4_6g12551 FvH4_6g12552 FvH4_6g38841 FvH4_7g04391
malus_domestica MD05G1031300.v1.1 MD05G1031400.v1.1 MD05G1031500.v1.1 MD08G1164400.v1.1 MD10G1032900.v1.1 MD10G1033000.v1.1 MD10G1033100.v1.1
prunus_persica Prupe.3G240700_v2.0.a1 Prupe.7G144600_v2.0.a1 Prupe.8G038500_v2.0.a1 Prupe.8G038500_v2.0.a1
pyrus_communis pycom05g02250 pycom05g02260 pycom05g02270 pycom05g02280 pycom08g14160 pycom10g02100 pycom10g02110 pycom10g02130
rosa_chinensis RchiOBHm_Chr1g0329481 RchiOBHm_Chr1g0329491 RchiOBHm_Chr1g0341531 RchiOBHm_Chr3g0464811 RchiOBHm_Chr3g0494701 RchiOBHm_Chr3g0497501 RchiOBHm_Chr4g0385841 RchiOBHm_Chr5g0061181 RchiOBHm_Chr6g0263001 RchiOBHm_Chr7g0193111 RchiOBHm_Chr7g0206281 RchiOBHm_Chr7g0206311
rosa_laevigata RLG00000018908 RLG00000028528 RLG00000028803 RLG00000029882 RLG00000029883 RLG00000030361
rosa_multiflora Rmu_co8196328.1_g000001 Rmu_co8259135.1_g000001 Rmu_co8269185.1_g000001 Rmu_sc0000076.1_g000019 Rmu_sc0000311.1_g000007 Rmu_sc0000429.1_g000038 Rmu_sc0000429.1_g000039 Rmu_sc0000429.1_g000040 Rmu_sc0000511.1_g000005 Rmu_sc0000539.1_g000054 Rmu_sc0000566.1_g000039 Rmu_sc0000805.1_g000032 Rmu_sc0000870.1_g000073 Rmu_sc0000870.1_g000074 Rmu_sc0001010.1_g000018 Rmu_sc0001083.1_g000013 Rmu_sc0001114.1_g000011 Rmu_sc0001702.1_g000027 Rmu_sc0001779.1_g000012 Rmu_sc0002923.1_g000036 Rmu_sc0003242.1_g000011 Rmu_sc0003291.1_g000036 Rmu_sc0003393.1_g000012 Rmu_sc0003872.1_g000016 Rmu_sc0003872.1_g000017 Rmu_sc0003872.1_g000018 Rmu_sc0004084.1_g000020 Rmu_sc0004386.1_g000005 Rmu_sc0004622.1_g000005 Rmu_sc0004742.1_g000021 Rmu_sc0004755.1_g000020 Rmu_sc0004805.1_g000036 Rmu_sc0005065.1_g000006 Rmu_sc0005177.1_g000004 Rmu_sc0006373.1_g000003 Rmu_sc0006373.1_g000004 Rmu_sc0007121.1_g000002 Rmu_sc0007943.1_g000003 Rmu_sc0010368.1_g000006 Rmu_sc0010543.1_g000001 Rmu_sc0012591.1_g000006 Rmu_sc0013504.1_g000009 Rmu_sc0015025.1_g000001 Rmu_sc0016170.1_g000001 Rmu_sc0017156.1_g000001 Rmu_sc0026439.1_g000001
rosa_roxburghii Rroxscaffold_175G00432280 Rroxscaffold_1G00030190 Rroxscaffold_1G00030880 Rroxscaffold_2G00090520 Rroxscaffold_3G00227940 Rroxscaffold_3G00233400 Rroxscaffold_3G00238500 Rroxscaffold_3G00251650 Rroxscaffold_4G00301570 Rroxscaffold_4G00321040 Rroxscaffold_5G00350880 Rroxscaffold_7G00184400
rosa_rugosa Rorug01G0080800 Rorug01G0080900 Rorug01G0193900 Rorug02G0275900 Rorug02G0275900 Rorug02G0275900 Rorug02G0305400 Rorug02G0311800 Rorug02G0350400 Rorug02G0381300 Rorug03G0136700 Rorug03G0181900 Rorug03G0268000 Rorug04G0301600 Rorug05G0175100 Rorug05G0250700 Rorug05G0298200 Rorug05G0596000 Rorug06G0029500 Rorug07G0094300 Rorug07G0094300 Rorug07G0095400 Rorug07G0140100
rosa_samantha Rh1AG099200 Rh1AG190500 Rh1BG078900 Rh1BG079000 Rh1BG079100 Rh1CG084600 Rh1CG084700 Rh1CG095300 Rh1CG175900 Rh1DG103300 Rh1DG150400 Rh2AG079300 Rh2AG272400 Rh2AG464800 Rh2AG507400 Rh2DG078300 Rh2DG078400 Rh3CG206900 Rh3CG295400 Rh3DG206800 Rh3DG356200 Rh4CG071500 Rh4CG179200 Rh4DG064700 Rh5CG362400 Rh7AG212300 Rh7AG226200 Rh7BG222200
rosa_wichuraiana Rw0G009990 Rw0G011260 Rw0G011270 Rw0G012910 Rw0G013740 Rw1G007740 Rw1G013050 Rw1G014230 Rw2G014270 Rw3G012720 Rw3G028110 Rw4G006630 Rw4G015270 Rw4G016160 Rw4G031380 Rw5G011440 Rw5G029180 Rw5G048360 Rw5G048430 Rw5G048780 Rw6G005250 Rw6G006390 Rw7G002840 Rw7G014080 Rw7G019650 Rw7G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 341, 574
AccB7I CCANNNNNTGG 1 cut(s) 13
AccBSI CCGCTC 1 cut(s) 511
AccI GTMKAC 2 cut(s) 188, 444
AciI CCGC 3 cut(s) 59, 337, 511
AclWI GGATC 1 cut(s) 379
AcsI RAATTY 3 cut(s) 54, 495, 662
AcyI GRCGYC 1 cut(s) 447
AfaI GTAC 3 cut(s) 5, 65, 767
AfiI CCNNNNNNNGG 3 cut(s) 13, 230, 740
AgsI TTSAA 4 cut(s) 421, 542, 575, 649
AluBI AGCT 5 cut(s) 123, 608, 620, 638, 728
AluI AGCT 5 cut(s) 123, 608, 620, 638, 728
Alw21I GWGCWC 1 cut(s) 433
Alw44I GTGCAC 1 cut(s) 429
AlwI GGATC 1 cut(s) 379
AoxI GGCC 1 cut(s) 713
ApaLI GTGCAC 1 cut(s) 429
ApeKI GCWGC 3 cut(s) 461, 527, 642
ApoI RAATTY 3 cut(s) 54, 495, 662
AspLEI GCGC 1 cut(s) 466
AspS9I GGNCC 1 cut(s) 378
AvaII GGWCC 1 cut(s) 378
BaeGI GKGCMC 1 cut(s) 433
BbsI GAAGAC 1 cut(s) 294
Bbv12I GWGCWC 1 cut(s) 433
BbvI GCAGC 3 cut(s) 448, 514, 629
BccI CCATC 3 cut(s) 134, 142, 742
BceAI ACGGC 1 cut(s) 757
BciVI GTATCC 1 cut(s) 344
BfaI CTAG 1 cut(s) 93
BfmI CTRYAG 2 cut(s) 72, 348
BfuAI ACCTGC 2 cut(s) 341, 574
BfuI GTATCC 1 cut(s) 344
BisI GCNGC 3 cut(s) 462, 528, 643
BlsI GCNGC 3 cut(s) 463, 529, 644
BmcAI AGTACT 1 cut(s) 767
Bme18I GGWCC 1 cut(s) 378
BmgT120I GGNCC 1 cut(s) 378
BmiI GGNNCC 1 cut(s) 379
BmsI GCATC 2 cut(s) 8, 514
BpiI GAAGAC 1 cut(s) 294
BpuEI CTTGAG 2 cut(s) 103, 638
BsaHI GRCGYC 1 cut(s) 447
Bsc4I CCNNNNNNNGG 3 cut(s) 13, 230, 740
Bse1I ACTGG 1 cut(s) 303
Bse3DI GCAATG 1 cut(s) 693
BseGI GGATG 4 cut(s) 23, 85, 150, 519
BseLI CCNNNNNNNGG 3 cut(s) 13, 230, 740
BseMI GCAATG 1 cut(s) 693
BseMII CTCAG 2 cut(s) 117, 612
BseNI ACTGG 1 cut(s) 303
BseRI GAGGAG 3 cut(s) 18, 106, 696
BseSI GKGCMC 1 cut(s) 433
BseXI GCAGC 3 cut(s) 448, 514, 629
BsgI GTGCAG 1 cut(s) 685
BshFI GGCC 1 cut(s) 715
BsiHKAI GWGCWC 1 cut(s) 433
BslFI GGGAC 1 cut(s) 602
BslI CCNNNNNNNGG 3 cut(s) 13, 230, 740
BsmFI GGGAC 1 cut(s) 602
BsmI GAATGC 1 cut(s) 322
BsnI GGCC 1 cut(s) 715
Bsp1286I GDGCHC 1 cut(s) 433
Bsp143I GATC 3 cut(s) 371, 395, 759
BspACI CCGC 3 cut(s) 59, 337, 511
BspANI GGCC 1 cut(s) 715
BspCNI CTCAG 2 cut(s) 118, 613
BspLI GGNNCC 1 cut(s) 379
BspMAI CTGCAG 2 cut(s) 76, 352
BspMI ACCTGC 2 cut(s) 341, 574
BspPI GGATC 1 cut(s) 379
BsrBI CCGCTC 1 cut(s) 511
BsrDI GCAATG 1 cut(s) 693
BsrI ACTGG 1 cut(s) 303
BssMI GATC 3 cut(s) 371, 395, 759
BssNI GRCGYC 1 cut(s) 447
Bst4CI ACNGT 1 cut(s) 602
BstACI GRCGYC 1 cut(s) 447
BstAPI GCANNNNNTGC 1 cut(s) 699
BstC8I GCNNGC 2 cut(s) 640, 700
BstDEI CTNAG 2 cut(s) 126, 621
BstF5I GGATG 4 cut(s) 23, 85, 150, 519
BstHHI GCGC 1 cut(s) 466
BstKTI GATC 3 cut(s) 374, 398, 762
BstMBI GATC 3 cut(s) 371, 395, 759
BstMWI GCNNNNNNNGC 2 cut(s) 470, 699
BstSFI CTRYAG 2 cut(s) 72, 348
BstSLI GKGCMC 1 cut(s) 433
BstV1I GCAGC 3 cut(s) 448, 514, 629
BstV2I GAAGAC 1 cut(s) 294
BsuI GTATCC 1 cut(s) 344
BsuRI GGCC 1 cut(s) 715
BtsCI GGATG 4 cut(s) 23, 85, 150, 519
BtsIMutI CAGTG 1 cut(s) 607
BveI ACCTGC 2 cut(s) 341, 574
Cac8I GCNNGC 2 cut(s) 640, 700
CfoI GCGC 1 cut(s) 466
Cfr13I GGNCC 1 cut(s) 378
CseI GACGC 2 cut(s) 455, 462
Csp6I GTAC 3 cut(s) 4, 64, 766
CspCI CAANNNNNGTGG 2 cut(s) 520, 555
CviAII CATG 3 cut(s) 265, 425, 581
CviQI GTAC 3 cut(s) 4, 64, 766
DdeI CTNAG 2 cut(s) 126, 621
DpnI GATC 3 cut(s) 373, 397, 761
DpnII GATC 3 cut(s) 371, 395, 759
DraI TTTAAA 1 cut(s) 501
Eco47I GGWCC 1 cut(s) 378
EcoO109I RGGNCCY 1 cut(s) 378
EcoRI GAATTC 1 cut(s) 662
EcoT22I ATGCAT 1 cut(s) 23
FaeI CATG 3 cut(s) 268, 428, 584
FaqI GGGAC 1 cut(s) 602
FatI CATG 3 cut(s) 264, 424, 580
FblI GTMKAC 2 cut(s) 188, 444
Fnu4HI GCNGC 3 cut(s) 462, 528, 643
FokI GGATG 4 cut(s) 30, 92, 157, 526
Fsp4HI GCNGC 3 cut(s) 462, 528, 643
FspBI CTAG 1 cut(s) 93
GlaI GCGC 1 cut(s) 465
GluI GCNGC 3 cut(s) 462, 528, 643
HaeIII GGCC 1 cut(s) 715
HgaI GACGC 2 cut(s) 455, 462
HhaI GCGC 1 cut(s) 466
Hin1I GRCGYC 1 cut(s) 447
Hin1II CATG 3 cut(s) 268, 428, 584
Hin6I GCGC 1 cut(s) 464
HinP1I GCGC 1 cut(s) 464
HincII GTYRAC 1 cut(s) 445
HindII GTYRAC 1 cut(s) 445
HindIII AAGCTT 1 cut(s) 636
HinfI GANTC 4 cut(s) 68, 167, 215, 542
Hpy166II GTNNAC 5 cut(s) 112, 189, 262, 431, 445
Hpy188I TCNGA 7 cut(s) 127, 172, 286, 310, 357, 371, 739
Hpy188III TCNNGA 1 cut(s) 539
Hpy8I GTNNAC 5 cut(s) 112, 189, 262, 431, 445
Hpy99I CGWCG 1 cut(s) 449
HpyAV CCTTC 4 cut(s) 96, 224, 408, 705
HpyCH4III ACNGT 1 cut(s) 602
HpyCH4V TGCA 8 cut(s) 21, 74, 205, 320, 350, 431, 702, 772
HpyF10VI GCNNNNNNNGC 2 cut(s) 470, 699
HpyF3I CTNAG 2 cut(s) 126, 621
Hsp92I GRCGYC 1 cut(s) 447
Hsp92II CATG 3 cut(s) 268, 428, 584
HspAI GCGC 1 cut(s) 464
Kzo9I GATC 3 cut(s) 371, 395, 759
LpnPI CCDG 6 cut(s) 88, 284, 336, 360, 579, 712
Lsp1109I GCAGC 3 cut(s) 448, 514, 629
LweI GCATC 2 cut(s) 8, 514
MaeI CTAG 1 cut(s) 93
MalI GATC 3 cut(s) 373, 397, 761
MbiI CCGCTC 1 cut(s) 511
MboI GATC 3 cut(s) 371, 395, 759
MboII GAAGA 3 cut(s) 299, 587, 669
MhlI GDGCHC 1 cut(s) 433
MluCI AATT 6 cut(s) 54, 321, 358, 495, 662, 775
MmeI TCCRAC 1 cut(s) 335
MnlI CCTC 7 cut(s) 39, 70, 127, 238, 264, 484, 717
Mph1103I ATGCAT 1 cut(s) 23
MseI TTAA 2 cut(s) 500, 687
MslI CAYNNNNRTG 1 cut(s) 16
MspA1I CMGCKG 1 cut(s) 61
Mva1269I GAATGC 1 cut(s) 322
MwoI GCNNNNNNNGC 2 cut(s) 470, 699
NdeII GATC 3 cut(s) 371, 395, 759
NlaIII CATG 3 cut(s) 268, 428, 584
NlaIV GGNNCC 1 cut(s) 379
NsiI ATGCAT 1 cut(s) 23
PcsI WCGNNNNNNNCGW 1 cut(s) 747
PctI GAATGC 1 cut(s) 322
PfeI GAWTC 4 cut(s) 68, 167, 215, 542
PflMI CCANNNNNTGG 1 cut(s) 13
PkrI GCNGC 3 cut(s) 463, 529, 644
PpuMI RGGWCCY 1 cut(s) 378
Psp5II RGGWCCY 1 cut(s) 378
PspN4I GGNNCC 1 cut(s) 379
PspPI GGNCC 1 cut(s) 378
PspPPI RGGWCCY 1 cut(s) 378
PstI CTGCAG 2 cut(s) 76, 352
RsaI GTAC 3 cut(s) 5, 65, 767
RsaNI GTAC 3 cut(s) 4, 64, 766
RseI CAYNNNNRTG 1 cut(s) 16
SalI GTCGAC 1 cut(s) 443
SaqAI TTAA 2 cut(s) 500, 687
SatI GCNGC 3 cut(s) 462, 528, 643
Sau3AI GATC 3 cut(s) 371, 395, 759
Sau96I GGNCC 1 cut(s) 378
ScaI AGTACT 1 cut(s) 767
SduI GDGCHC 1 cut(s) 433
SfaNI GCATC 2 cut(s) 8, 514
SfcI CTRYAG 2 cut(s) 72, 348
SinI GGWCC 1 cut(s) 378
SmiMI CAYNNNNRTG 1 cut(s) 16
SmlI CTYRAG 2 cut(s) 118, 653
SmoI CTYRAG 2 cut(s) 118, 653
Sse9I AATT 6 cut(s) 54, 321, 358, 495, 662, 775
SsiI CCGC 3 cut(s) 59, 337, 511
SspMI CTAG 1 cut(s) 93
TaaI ACNGT 1 cut(s) 602
TaqI TCGA 3 cut(s) 444, 666, 709
TasI AATT 6 cut(s) 54, 321, 358, 495, 662, 775
TatI WGTACW 1 cut(s) 765
TfiI GAWTC 4 cut(s) 68, 167, 215, 542
Tru1I TTAA 2 cut(s) 500, 687
Tru9I TTAA 2 cut(s) 500, 687
TscAI CASTG 1 cut(s) 607
TseI GCWGC 3 cut(s) 461, 527, 642
TspDTI ATGAA 2 cut(s) 530, 597
TspGWI ACGGA 1 cut(s) 34
TspRI CASTG 1 cut(s) 607
Van91I CCANNNNNTGG 1 cut(s) 13
VneI GTGCAC 1 cut(s) 429
VpaK11BI GGWCC 1 cut(s) 378
XapI RAATTY 3 cut(s) 54, 495, 662
XmiI GTMKAC 2 cut(s) 188, 444
XspI CTAG 1 cut(s) 93
ZrmI AGTACT 1 cut(s) 767
Zsp2I ATGCAT 1 cut(s) 23
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.