RchiOBHm_Chr7g0206311

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000143
Physical Location & Seq
Reverse (-)
24020832 .. 24026123
5292 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ18464

Sequence Viewer

Length: 2415 bp
ATGGAGGTCGATAAGGCTGCAGGGATTGGCTGCAGTGATGTAGGCTCTACATTTGCACTGGATCACACTAGTCAGTTCACCACGACTGAGATATTCAAGAGCAGAAAAGATTTAATAGAATGGGTTTCGCGTGTTGGGAGGTCGAATGGTTTCAATATTGTGACATTAAATTCTGACGTTGGTAAAGGCAATAGAAGAGCAACAATTACATTGGGTTGTGAAAGGAGTGGAAAATATGGTAGACGAACTCCCAAGAAAGGGAAGAAGAAAAATTGTGGAAGACCTCAAGGCAAAAAGAAGTGTGGTTGTCCATTCAAGCTAAAGGGCAGAAAGCTAGAAACTAATGATGATTGGGAGTTGAAGGTTGTTGAAGGAATCCATAACCATGCAGCCTGGTACTCAAAGGCAGATATTTCAGTTTCTAGTAGATTACCTTCAGAGGACAAATTAAGGGGGAGGGATGTGTTTAAGGACGATATAAGTGAGAGTGGGTCTGAAATGCAATCATTGATGATTAAGTTGTCCAAGTACAACTACATTGAACAACATAGGAGCTGCCCACAGACCAAAACTATCTTAGATTTTTTCTTGACACACCTCTCTAGCTTTAAATTATTGCGTGCATTTGCACGTGTTTTGGAGGTGGAATGCATATCAAAGCAGGAGGGAAATCATGATGGGGCAATTTTAATGATTTTTGGACGCACATCAACTGATATACCATTTTTTGTGGGTATTGTATTCCTTTCTTCTAATCAAAAAGAAAGTTATGTATGGGCTTTACGAACATTGCAGGGTTTGATGGTTACTAGTGGTAATACTATGCCTGATATCATTGTGTTAATAACTACGGAGGTGGCTTTGATGGAAGCCGTTGAGGTTGTTTTTAGTAGGACAAAGCTTTTGTTGTGTGCGTGGGCCTTTCCTAGCTTTGTGGAATTTGCTTATGAGGAGGTATTTGACTTGAAGGAGGAGTTAGATTATTTTCTGAAGAGGTTGGATGTATTGATATCATCTCCCACTGCAGCTAATTTTGAGTTGCAGTTACTGCAACTACATAATGACTTTAGCAGATATCCTGCAGTACTTGAGTACGTAACCCACACTTGGTTGAACCCGCATAAGGAAAAGCTTGTTGCAGCATGGACAAATGTTTTTATGCATTTTGGGGTCGCAAATTCGCTCAGGGAGAATACAAAACTTCAAGAAATATTAGGAAATCTGATTGAGAATTTAACTGTGCCTGTAAAGAATCAAATTCTTAAGTTGGAGGAATCATTTGAAGAGATACATGCTGGGCTTGAATTGCAGGAGACCAAAATCAATGCTTCACTGGAAAGCTGTTTAACAGTGAATGCAGATGAGTTGAGGCTTCCAGAATTCAAAGAGCTTTGTGGGGCTATTTCTGTTACTGCATTGCATCTGGTCCTGCAGCAGATGATGTTGGTCAATATAGTTGATGGTGATCTCTGCCATTGTGCCATACGCAATACCCATGGGTTACCATGTGCTCATGAGCTTGCAAAATACAAGAAAGGTGATAGACCTATTCCATTGGACTGTATCGATCCTTATTGGATGAAGCTTGACACGAAACCTTTAGGAAAGAATGTAGAGTGTGGTGTGGAGGAGAGTATGAAGCTGCATAAGTTGTTTATGGAAATGGATACATCTGATCCTTCTTCTCCACCTTTGCCTAAGATTGGGGGATCTGCACAATGCAATACACCTACAGTGCATTTCAAAGAAGAGAGACAATCAGAGGTATATCACATGCCCCTTAAGTATGTGGGTACATGCCCGGCTGTTTTGACACCATACATCGTTGATATTAAGGATGTGGCAGCCGATGGTCATTGTGGTTTCAGGGCCATCGCTTCATTGTTGGGTAACACCGATGAGGATGGATGGATGACAGTGAGGAGGGACTTGATGGAAGAGCTGGAGCTTAAATCAGCTCAGTATGCCCAACTGTATAGGTTAGAATCGTTAGGCAAAAGGGTCATTGAGCTAAGTAAATCATTGGATTGTTTTGACAGAGTGTGTTATGATACAAACCACTGGATGACTATGCCTGAGATGGGCCATATAATTGCAACCCGTTACAACGTCGTACTCATGCACCTCTCTTCTGTTCAGTCTCTTACATTTCTACCCCTAAGAACTTTACCATCATCATTCTCATCGCTGAGGGAGATTTCTGTGGGATTTGTCAATGGTCACTTCGTTCAGGTACACTTGAAACCTGGTCACCCAATGCCTCCTATTGCAAGGGACTGGGAAAGGTATCATGAGCATGAACGAACCTTCCCAGAAGAATGGAGCACCCTCTACTCTGCTCGTTTGGATCATTTCAAAGCCTTACAGCCTGAGGCCTACTCAAAAGTTGATAAGGAAGTGATTAAAATTGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE

Protein Analysis

804

Amino Acids

91.19

Weight (kDa)

6.36

Isoelectric Point (pI)

40.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000143)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G76710 AT1G76710 AT1G76710 AT1G76710
fragaria_vesca FvH4_1g20063 FvH4_2g15231 FvH4_3g04011 FvH4_3g28681 FvH4_4g01411 FvH4_4g10181 FvH4_4g15922 FvH4_4g16651 FvH4_4g16652 FvH4_5g13892 FvH4_5g13893 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g20623 FvH4_5g25511 FvH4_6g12551 FvH4_6g12552 FvH4_6g38841 FvH4_7g04391
malus_domestica MD05G1031300.v1.1 MD05G1031400.v1.1 MD05G1031500.v1.1 MD08G1164400.v1.1 MD10G1032900.v1.1 MD10G1033000.v1.1 MD10G1033100.v1.1
prunus_persica Prupe.3G240700_v2.0.a1 Prupe.7G144600_v2.0.a1 Prupe.8G038500_v2.0.a1 Prupe.8G038500_v2.0.a1
pyrus_communis pycom05g02250 pycom05g02260 pycom05g02270 pycom05g02280 pycom08g14160 pycom10g02100 pycom10g02110 pycom10g02130
rosa_chinensis RchiOBHm_Chr1g0329481 RchiOBHm_Chr1g0329491 RchiOBHm_Chr1g0341531 RchiOBHm_Chr3g0464811 RchiOBHm_Chr3g0494701 RchiOBHm_Chr3g0497501 RchiOBHm_Chr4g0385841 RchiOBHm_Chr5g0061181 RchiOBHm_Chr6g0263001 RchiOBHm_Chr7g0193111 RchiOBHm_Chr7g0206281 RchiOBHm_Chr7g0206311
rosa_laevigata RLG00000018908 RLG00000028528 RLG00000028803 RLG00000029882 RLG00000029883 RLG00000030361
rosa_multiflora Rmu_co8196328.1_g000001 Rmu_co8259135.1_g000001 Rmu_co8269185.1_g000001 Rmu_sc0000076.1_g000019 Rmu_sc0000311.1_g000007 Rmu_sc0000429.1_g000038 Rmu_sc0000429.1_g000039 Rmu_sc0000429.1_g000040 Rmu_sc0000511.1_g000005 Rmu_sc0000539.1_g000054 Rmu_sc0000566.1_g000039 Rmu_sc0000805.1_g000032 Rmu_sc0000870.1_g000073 Rmu_sc0000870.1_g000074 Rmu_sc0001010.1_g000018 Rmu_sc0001083.1_g000013 Rmu_sc0001114.1_g000011 Rmu_sc0001702.1_g000027 Rmu_sc0001779.1_g000012 Rmu_sc0002923.1_g000036 Rmu_sc0003242.1_g000011 Rmu_sc0003291.1_g000036 Rmu_sc0003393.1_g000012 Rmu_sc0003872.1_g000016 Rmu_sc0003872.1_g000017 Rmu_sc0003872.1_g000018 Rmu_sc0004084.1_g000020 Rmu_sc0004386.1_g000005 Rmu_sc0004622.1_g000005 Rmu_sc0004742.1_g000021 Rmu_sc0004755.1_g000020 Rmu_sc0004805.1_g000036 Rmu_sc0005065.1_g000006 Rmu_sc0005177.1_g000004 Rmu_sc0006373.1_g000003 Rmu_sc0006373.1_g000004 Rmu_sc0007121.1_g000002 Rmu_sc0007943.1_g000003 Rmu_sc0010368.1_g000006 Rmu_sc0010543.1_g000001 Rmu_sc0012591.1_g000006 Rmu_sc0013504.1_g000009 Rmu_sc0015025.1_g000001 Rmu_sc0016170.1_g000001 Rmu_sc0017156.1_g000001 Rmu_sc0026439.1_g000001
rosa_roxburghii Rroxscaffold_175G00432280 Rroxscaffold_1G00030190 Rroxscaffold_1G00030880 Rroxscaffold_2G00090520 Rroxscaffold_3G00227940 Rroxscaffold_3G00233400 Rroxscaffold_3G00238500 Rroxscaffold_3G00251650 Rroxscaffold_4G00301570 Rroxscaffold_4G00321040 Rroxscaffold_5G00350880 Rroxscaffold_7G00184400
rosa_rugosa Rorug01G0080800 Rorug01G0080900 Rorug01G0193900 Rorug02G0275900 Rorug02G0275900 Rorug02G0275900 Rorug02G0305400 Rorug02G0311800 Rorug02G0350400 Rorug02G0381300 Rorug03G0136700 Rorug03G0181900 Rorug03G0268000 Rorug04G0301600 Rorug05G0175100 Rorug05G0250700 Rorug05G0298200 Rorug05G0596000 Rorug06G0029500 Rorug07G0094300 Rorug07G0094300 Rorug07G0095400 Rorug07G0140100
rosa_samantha Rh1AG099200 Rh1AG190500 Rh1BG078900 Rh1BG079000 Rh1BG079100 Rh1CG084600 Rh1CG084700 Rh1CG095300 Rh1CG175900 Rh1DG103300 Rh1DG150400 Rh2AG079300 Rh2AG272400 Rh2AG464800 Rh2AG507400 Rh2DG078300 Rh2DG078400 Rh3CG206900 Rh3CG295400 Rh3DG206800 Rh3DG356200 Rh4CG071500 Rh4CG179200 Rh4DG064700 Rh5CG362400 Rh7AG212300 Rh7AG226200 Rh7BG222200
rosa_wichuraiana Rw0G009990 Rw0G011260 Rw0G011270 Rw0G012910 Rw0G013740 Rw1G007740 Rw1G013050 Rw1G014230 Rw2G014270 Rw3G012720 Rw3G028110 Rw4G006630 Rw4G015270 Rw4G016160 Rw4G031380 Rw5G011440 Rw5G029180 Rw5G048360 Rw5G048430 Rw5G048780 Rw6G005250 Rw6G006390 Rw7G002840 Rw7G014080 Rw7G019650 Rw7G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 241
AccII CGCG 1 cut(s) 130
AciI CCGC 1 cut(s) 1118
AclWI GGATC 5 cut(s) 69, 1562, 1670, 1717, 2355
AcsI RAATTY 6 cut(s) 169, 938, 1177, 1231, 1257, 1379
AcuI CTGAAG 2 cut(s) 420, 1010
AcvI CACGTG 1 cut(s) 632
AfaI GTAC 7 cut(s) 398, 530, 1086, 1094, 1795, 2115, 2235
AfiI CCNNNNNNNGG 6 cut(s) 257, 258, 1107, 1123, 1703, 2081
AflII CTTAAG 2 cut(s) 1262, 1781
AflIII ACRYGT 1 cut(s) 631
AhlI ACTAGT 2 cut(s) 68, 809
AjnI CCWGG 2 cut(s) 392, 2245
AloI GAACNNNNNNTCC 2 cut(s) 2292, 2324
Alw21I GWGCWC 2 cut(s) 1513, 2327
Alw26I GTCTC 3 cut(s) 1307, 1747, 2145
AlwI GGATC 5 cut(s) 69, 1562, 1670, 1717, 2355
AlwNI CAGNNNCTG 1 cut(s) 1048
AoxI GGCC 4 cut(s) 918, 1869, 2083, 2373
ApeKI GCWGC 9 cut(s) 17, 30, 389, 555, 1025, 1139, 1432, 1642, 1844
ApoI RAATTY 6 cut(s) 169, 938, 1177, 1231, 1257, 1379
ArsI GACNNNNNNTTYG 2 cut(s) 886, 918
Asp700I GAANNNNTTC 1 cut(s) 149
AspS9I GGNCC 4 cut(s) 918, 1426, 1869, 2083
AsuC2I CCSGG 1 cut(s) 1802
AsuHPI GGTGA 4 cut(s) 70, 1475, 1550, 2243
AvaII GGWCC 1 cut(s) 1426
AxyI CCTNAGG 1 cut(s) 2370
BarI GAAGNNNNNNTAC 2 cut(s) 418, 450
BbrPI CACGTG 1 cut(s) 632
BbsI GAAGAC 1 cut(s) 286
Bbv12I GWGCWC 2 cut(s) 1513, 2327
BbvCI CCTCAGC 1 cut(s) 2189
BbvI GCAGC 9 cut(s) 4, 17, 401, 542, 1037, 1151, 1444, 1629, 1856
BceAI ACGGC 1 cut(s) 857
BcgI CGANNNNNNTGC 1 cut(s) 33
BciT130I CCWGG 2 cut(s) 394, 2247
BciVI GTATCC 1 cut(s) 1660
BcnI CCSGG 1 cut(s) 1802
BcoDI GTCTC 3 cut(s) 1307, 1747, 2145
BcuI ACTAGT 2 cut(s) 68, 809
BfaI CTAG 6 cut(s) 69, 335, 423, 603, 810, 927
BfmI CTRYAG 6 cut(s) 18, 31, 1023, 1080, 1430, 1731
BfrI CTTAAG 2 cut(s) 1262, 1781
BfuI GTATCC 1 cut(s) 1660
BisI GCNGC 9 cut(s) 18, 31, 390, 556, 1026, 1140, 1433, 1643, 1845
BlsI GCNGC 9 cut(s) 19, 32, 391, 557, 1027, 1141, 1434, 1644, 1846
BmcAI AGTACT 1 cut(s) 1086
Bme1390I CCNGG 3 cut(s) 394, 1802, 2247
Bme18I GGWCC 1 cut(s) 1426
BmgT120I GGNCC 4 cut(s) 918, 1426, 1869, 2083
BmrFI CCNGG 3 cut(s) 394, 1802, 2247
BmrI ACTGGG 1 cut(s) 2287
BmsI GCATC 1 cut(s) 1429
BmuI ACTGGG 1 cut(s) 2287
BpiI GAAGAC 1 cut(s) 286
BplI GAGNNNNNCTC 2 cut(s) 2363, 2395
BpmI CTGGAG 1 cut(s) 1964
Bpu10I CCTNAGC 2 cut(s) 1184, 2189
BpuEI CTTGAG 2 cut(s) 270, 1109
BpuMI CCSGG 1 cut(s) 1802
Bsa29I ATCGAT 1 cut(s) 1566
BsaAI YACGTR 2 cut(s) 632, 1096
BsaBI GATNNNNATC 1 cut(s) 1464
BsaI GGTCTC 1 cut(s) 1307
BsaJI CCNNGG 1 cut(s) 1495
Bsc4I CCNNNNNNNGG 6 cut(s) 257, 258, 1107, 1123, 1703, 2081
Bse1I ACTGG 4 cut(s) 63, 1338, 2066, 2282
Bse21I CCTNAGG 1 cut(s) 2370
Bse3DI GCAATG 2 cut(s) 788, 1415
Bse8I GATNNNNATC 1 cut(s) 1464
BseBI CCWGG 2 cut(s) 394, 2247
BseCI ATCGAT 1 cut(s) 1566
BseDI CCNNGG 1 cut(s) 1495
BseGI GGATG 8 cut(s) 466, 1006, 1584, 1843, 1909, 1913, 1917, 2070
BseJI GATNNNNATC 1 cut(s) 1464
BseLI CCNNNNNNNGG 6 cut(s) 257, 258, 1107, 1123, 1703, 2081
BseMI GCAATG 2 cut(s) 788, 1415
BseMII CTCAG 6 cut(s) 78, 1198, 1973, 2067, 2180, 2361
BseNI ACTGG 4 cut(s) 63, 1338, 2066, 2282
BseRI GAGGAG 4 cut(s) 965, 986, 1643, 1936
BseXI GCAGC 9 cut(s) 4, 17, 401, 542, 1037, 1151, 1444, 1629, 1856
BseYI CCCAGC 1 cut(s) 1295
BsgI GTGCAG 1 cut(s) 1698
Bsh1236I CGCG 1 cut(s) 130
BshFI GGCC 4 cut(s) 920, 1871, 2085, 2375
BshVI ATCGAT 1 cut(s) 1566
BsiHKAI GWGCWC 2 cut(s) 1513, 2327
BsiSI CCGG 1 cut(s) 1802
BslFI GGGAC 2 cut(s) 1940, 2288
BslI CCNNNNNNNGG 6 cut(s) 257, 258, 1107, 1123, 1703, 2081
BsmAI GTCTC 3 cut(s) 1307, 1747, 2145
BsmFI GGGAC 2 cut(s) 1940, 2288
BsmI GAATGC 2 cut(s) 653, 1360
BsnI GGCC 4 cut(s) 920, 1871, 2085, 2375
Bso31I GGTCTC 1 cut(s) 1307
Bsp1286I GDGCHC 2 cut(s) 1513, 2327
Bsp143I GATC 6 cut(s) 61, 1465, 1567, 1675, 1709, 2347
Bsp19I CCATGG 1 cut(s) 1495
BspACI CCGC 1 cut(s) 1118
BspANI GGCC 4 cut(s) 920, 1871, 2085, 2375
BspCNI CTCAG 6 cut(s) 79, 1197, 1972, 2068, 2181, 2362
BspDI ATCGAT 1 cut(s) 1566
BspFNI CGCG 1 cut(s) 130
BspHI TCATGA 3 cut(s) 673, 1513, 2290
BspMAI CTGCAG 5 cut(s) 22, 35, 1027, 1084, 1434
BspPI GGATC 5 cut(s) 69, 1562, 1670, 1717, 2355
BspQI GCTCTTC 2 cut(s) 190, 1932
BspTI CTTAAG 2 cut(s) 1262, 1781
BspTNI GGTCTC 1 cut(s) 1307
BsrDI GCAATG 2 cut(s) 788, 1415
BsrI ACTGG 4 cut(s) 63, 1338, 2066, 2282
BssECI CCNNGG 1 cut(s) 1495
BssMI GATC 6 cut(s) 61, 1465, 1567, 1675, 1709, 2347
BssT1I CCWWGG 1 cut(s) 1495
Bst2UI CCWGG 2 cut(s) 394, 2247
Bst4CI ACNGT 6 cut(s) 1240, 1351, 1562, 1735, 1918, 1974
Bst6I CTCTTC 6 cut(s) 190, 986, 1278, 1743, 1932, 2134
BstAFI CTTAAG 2 cut(s) 1262, 1781
BstAPI GCANNNNNTGC 1 cut(s) 1048
BstBAI YACGTR 2 cut(s) 632, 1096
BstC8I GCNNGC 2 cut(s) 621, 1521
BstDSI CCRYGG 1 cut(s) 1495
BstEII GGTNACC 2 cut(s) 1500, 2249
BstF5I GGATG 8 cut(s) 466, 1006, 1584, 1843, 1909, 1913, 1917, 2070
BstFNI CGCG 1 cut(s) 130
BstKTI GATC 6 cut(s) 64, 1468, 1570, 1678, 1712, 2350
BstMAI GTCTC 3 cut(s) 1307, 1747, 2145
BstMBI GATC 6 cut(s) 61, 1465, 1567, 1675, 1709, 2347
BstMWI GCNNNNNNNGC 3 cut(s) 1048, 1306, 1964
BstNI CCWGG 2 cut(s) 394, 2247
BstNSI RCATGY 3 cut(s) 1295, 1777, 1800
BstPI GGTNACC 2 cut(s) 1500, 2249
BstSCI CCNGG 3 cut(s) 392, 1800, 2245
BstSFI CTRYAG 6 cut(s) 18, 31, 1023, 1080, 1430, 1731
BstSNI TACGTA 1 cut(s) 1096
BstUI CGCG 1 cut(s) 130
BstV1I GCAGC 9 cut(s) 4, 17, 401, 542, 1037, 1151, 1444, 1629, 1856
BstV2I GAAGAC 1 cut(s) 286
BstX2I RGATCY 1 cut(s) 1709
BstXI CCANNNNNNTGG 1 cut(s) 2319
BstYI RGATCY 1 cut(s) 1709
Bsu15I ATCGAT 1 cut(s) 1566
Bsu36I CCTNAGG 1 cut(s) 2370
BsuI GTATCC 1 cut(s) 1660
BsuRI GGCC 4 cut(s) 920, 1871, 2085, 2375
BsuTUI ATCGAT 1 cut(s) 1566
BtgI CCRYGG 1 cut(s) 1495
BtgZI GCGATG 2 cut(s) 1858, 2169
BtsCI GGATG 8 cut(s) 466, 1006, 1584, 1843, 1909, 1913, 1917, 2070
BtsI GCAGTG 2 cut(s) 40, 1020
BtsIMutI CAGTG 8 cut(s) 40, 56, 1020, 1331, 1356, 1740, 1923, 2059
Cac8I GCNNGC 2 cut(s) 621, 1521
CaiI CAGNNNCTG 1 cut(s) 1048
CciI TCATGA 3 cut(s) 673, 1513, 2290
Cfr13I GGNCC 4 cut(s) 918, 1426, 1869, 2083
ClaI ATCGAT 1 cut(s) 1566
CseI GACGC 1 cut(s) 711
CsiI ACCWGGT 1 cut(s) 2245
Csp6I GTAC 7 cut(s) 397, 529, 1085, 1093, 1794, 2114, 2234
CviQI GTAC 7 cut(s) 397, 529, 1085, 1093, 1794, 2114, 2234
DpnI GATC 6 cut(s) 63, 1467, 1569, 1677, 1711, 2349
DpnII GATC 6 cut(s) 61, 1465, 1567, 1675, 1709, 2347
DraI TTTAAA 1 cut(s) 610
Eam1104I CTCTTC 6 cut(s) 190, 986, 1278, 1743, 1932, 2134
EarI CTCTTC 6 cut(s) 190, 986, 1278, 1743, 1932, 2134
Eco105I TACGTA 1 cut(s) 1096
Eco130I CCWWGG 1 cut(s) 1495
Eco147I AGGCCT 1 cut(s) 2375
Eco31I GGTCTC 1 cut(s) 1307
Eco32I GATATC 3 cut(s) 832, 1011, 1076
Eco47I GGWCC 1 cut(s) 1426
Eco57I CTGAAG 2 cut(s) 420, 1010
Eco72I CACGTG 1 cut(s) 632
Eco81I CCTNAGG 1 cut(s) 2370
Eco91I GGTNACC 2 cut(s) 1500, 2249
EcoO65I GGTNACC 2 cut(s) 1500, 2249
EcoRI GAATTC 1 cut(s) 1379
EcoRII CCWGG 2 cut(s) 392, 2245
EcoRV GATATC 3 cut(s) 832, 1011, 1076
EcoT14I CCWWGG 1 cut(s) 1495
EcoT22I ATGCAT 2 cut(s) 653, 1164
ErhI CCWWGG 1 cut(s) 1495
FaqI GGGAC 2 cut(s) 1940, 2288
FauI CCCGC 1 cut(s) 1125
FblI GTMKAC 1 cut(s) 241
Fnu4HI GCNGC 9 cut(s) 18, 31, 390, 556, 1026, 1140, 1433, 1643, 1845
FokI GGATG 8 cut(s) 473, 1013, 1591, 1850, 1916, 1920, 1924, 2077
Fsp4HI GCNGC 9 cut(s) 18, 31, 390, 556, 1026, 1140, 1433, 1643, 1845
FspBI CTAG 6 cut(s) 69, 335, 423, 603, 810, 927
GluI GCNGC 9 cut(s) 18, 31, 390, 556, 1026, 1140, 1433, 1643, 1845
GsaI CCCAGC 1 cut(s) 1299
GsuI CTGGAG 1 cut(s) 1964
HaeIII GGCC 4 cut(s) 920, 1871, 2085, 2375
HapII CCGG 1 cut(s) 1802
HgaI GACGC 1 cut(s) 711
HindIII AAGCTT 3 cut(s) 899, 1130, 1583
HinfI GANTC 4 cut(s) 375, 1252, 1274, 1985
HpaII CCGG 1 cut(s) 1802
HphI GGTGA 4 cut(s) 70, 1475, 1550, 2243
Hpy166II GTNNAC 3 cut(s) 78, 242, 2236
Hpy188I TCNGA 7 cut(s) 175, 439, 496, 990, 1224, 1675, 1762
Hpy188III TCNNGA 7 cut(s) 97, 589, 674, 1205, 1376, 1514, 2291
Hpy8I GTNNAC 3 cut(s) 78, 242, 2236
Hpy99I CGWCG 1 cut(s) 2114
HpyAV CCTTC 6 cut(s) 355, 365, 444, 961, 1689, 2317
HpyCH4III ACNGT 6 cut(s) 1240, 1351, 1562, 1735, 1918, 1974
HpyCH4IV ACGT 4 cut(s) 177, 631, 1095, 2109
HpyF10VI GCNNNNNNNGC 3 cut(s) 1048, 1306, 1964
HpySE526I ACGT 4 cut(s) 177, 631, 1095, 2109
Kzo9I GATC 6 cut(s) 61, 1465, 1567, 1675, 1709, 2347
LguI GCTCTTC 2 cut(s) 190, 1932
LmnI GCTCC 3 cut(s) 552, 1945, 2322
Lsp1109I GCAGC 9 cut(s) 4, 17, 401, 542, 1037, 1151, 1444, 1629, 1856
LweI GCATC 1 cut(s) 1429
MabI ACCWGGT 1 cut(s) 2245
MaeI CTAG 6 cut(s) 69, 335, 423, 603, 810, 927
MaeII ACGT 4 cut(s) 177, 631, 1095, 2109
MalI GATC 6 cut(s) 63, 1467, 1569, 1677, 1711, 2349
MboI GATC 6 cut(s) 61, 1465, 1567, 1675, 1709, 2347
MflI RGATCY 1 cut(s) 1709
MhlI GDGCHC 2 cut(s) 1513, 2327
MmeI TCCRAC 2 cut(s) 978, 1248
Mph1103I ATGCAT 2 cut(s) 653, 1164
MroXI GAANNNNTTC 1 cut(s) 149
MslI CAYNNNNRTG 2 cut(s) 384, 2295
MspCI CTTAAG 2 cut(s) 1262, 1781
MspI CCGG 1 cut(s) 1802
MspR9I CCNGG 3 cut(s) 394, 1802, 2247
Mva1269I GAATGC 2 cut(s) 653, 1360
MvaI CCWGG 2 cut(s) 394, 2247
MvnI CGCG 1 cut(s) 130
MwoI GCNNNNNNNGC 3 cut(s) 1048, 1306, 1964
NciI CCSGG 1 cut(s) 1802
NcoI CCATGG 1 cut(s) 1495
NdeII GATC 6 cut(s) 61, 1465, 1567, 1675, 1709, 2347
NmuCI GTSAC 3 cut(s) 160, 2219, 2249
NsiI ATGCAT 2 cut(s) 653, 1164
NspI RCATGY 3 cut(s) 1295, 1777, 1800
PagI TCATGA 3 cut(s) 673, 1513, 2290
PceI AGGCCT 1 cut(s) 2375
PciSI GCTCTTC 2 cut(s) 190, 1932
PctI GAATGC 2 cut(s) 653, 1360
PdmI GAANNNNTTC 1 cut(s) 149
PfeI GAWTC 4 cut(s) 375, 1252, 1274, 1985
PkrI GCNGC 9 cut(s) 19, 32, 391, 557, 1027, 1141, 1434, 1644, 1846
PmaCI CACGTG 1 cut(s) 632
PmlI CACGTG 1 cut(s) 632
Ppu21I YACGTR 2 cut(s) 632, 1096
Psp6I CCWGG 2 cut(s) 392, 2245
PspCI CACGTG 1 cut(s) 632
PspEI GGTNACC 2 cut(s) 1500, 2249
PspFI CCCAGC 1 cut(s) 1295
PspGI CCWGG 2 cut(s) 392, 2245
PspPI GGNCC 4 cut(s) 918, 1426, 1869, 2083
PstI CTGCAG 5 cut(s) 22, 35, 1027, 1084, 1434
PstNI CAGNNNCTG 1 cut(s) 1048
PsuI RGATCY 1 cut(s) 1709
RsaI GTAC 7 cut(s) 398, 530, 1086, 1094, 1795, 2115, 2235
RsaNI GTAC 7 cut(s) 397, 529, 1085, 1093, 1794, 2114, 2234
RseI CAYNNNNRTG 2 cut(s) 384, 2295
SapI GCTCTTC 2 cut(s) 190, 1932
SatI GCNGC 9 cut(s) 18, 31, 390, 556, 1026, 1140, 1433, 1643, 1845
Sau3AI GATC 6 cut(s) 61, 1465, 1567, 1675, 1709, 2347
Sau96I GGNCC 4 cut(s) 918, 1426, 1869, 2083
ScaI AGTACT 1 cut(s) 1086
ScrFI CCNGG 3 cut(s) 394, 1802, 2247
SduI GDGCHC 2 cut(s) 1513, 2327
SexAI ACCWGGT 1 cut(s) 2245
SfaNI GCATC 1 cut(s) 1429
SfcI CTRYAG 6 cut(s) 18, 31, 1023, 1080, 1430, 1731
SinI GGWCC 1 cut(s) 1426
SmiMI CAYNNNNRTG 2 cut(s) 384, 2295
SmlI CTYRAG 4 cut(s) 285, 1088, 1262, 1781
SmoI CTYRAG 4 cut(s) 285, 1088, 1262, 1781
SnaBI TACGTA 1 cut(s) 1096
SpeI ACTAGT 2 cut(s) 68, 809
SseBI AGGCCT 1 cut(s) 2375
SsiI CCGC 1 cut(s) 1118
SspI AATATT 2 cut(s) 157, 1212
SspMI CTAG 6 cut(s) 69, 335, 423, 603, 810, 927
StuI AGGCCT 1 cut(s) 2375
StyD4I CCNGG 3 cut(s) 392, 1800, 2245
StyI CCWWGG 1 cut(s) 1495
TaaI ACNGT 6 cut(s) 1240, 1351, 1562, 1735, 1918, 1974
TaiI ACGT 4 cut(s) 180, 634, 1098, 2112
TaqI TCGA 3 cut(s) 9, 143, 1566
TatI WGTACW 2 cut(s) 528, 1084
TfiI GAWTC 4 cut(s) 375, 1252, 1274, 1985
TscAI CASTG 8 cut(s) 40, 63, 1027, 1338, 1356, 1740, 1923, 2066
TseFI GTSAC 3 cut(s) 160, 2219, 2249
TseI GCWGC 9 cut(s) 17, 30, 389, 555, 1025, 1139, 1432, 1642, 1844
Tsp45I GTSAC 3 cut(s) 160, 2219, 2249
TspDTI ATGAA 4 cut(s) 1595, 1652, 1869, 2313
TspGWI ACGGA 1 cut(s) 866
TspRI CASTG 8 cut(s) 40, 63, 1027, 1338, 1356, 1740, 1923, 2066
Vha464I CTTAAG 2 cut(s) 1262, 1781
VpaK11BI GGWCC 1 cut(s) 1426
XapI RAATTY 6 cut(s) 169, 938, 1177, 1231, 1257, 1379
XceI RCATGY 3 cut(s) 1295, 1777, 1800
XmiI GTMKAC 1 cut(s) 241
XmnI GAANNNNTTC 1 cut(s) 149
XspI CTAG 6 cut(s) 69, 335, 423, 603, 810, 927
ZrmI AGTACT 1 cut(s) 1086
Zsp2I ATGCAT 2 cut(s) 653, 1164
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.