AT5G08420

Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0000145
Physical Location & Seq
Forward (+)
2713347 .. 2716328
2982 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G08420.1

Sequence Viewer

Length: 1176 bp
ATGGCGGAGGTGGAGGAGATTGCGCACGAGGAGCAGAATATCGAGAAGAGGGAGAAGAAGAAAGGTAAACACGAGAAGCCGAAGCCATGGGATGATGACCCAAACATCGACCGTTGGACAATCGAGAAGTTTGATCCGGCATGGAACCCCACTGGTATGACTGAAACCAGCACGTTCTCAACACTCTTTCCTCAATACAGAGAGAAGTATCTTCAGGAGTGTTGGCCTAGAGTTGAATCTGCTCTTAAGGAGTACGGTGTCGCCTGCAAGCTCAACTTGGTTGAAGGTTCTATGACTGTTTCGACGACGAGGAAGACAAGAGATCCATACATCATTGTCAAAGCTAGGGATTTGATTAAGCTTCTTTCCAGAAGTGTCCCTGCTCCTCAGGCAATTAAGATTCTCGAAGATGAGGTGCAATGTGATATCATCAAGATCGGTAACTTGGTTAGAAATAAGGAAAGATTTGTTAAAAGAAGGCAGCGGCTTGTGGGTCCTAATTCTTCTACCTTGAAGGCGCTGGAAATATTAACCAACTGTTACATTCTAGTTCAGGGAAGTACTGTAGCCGCTATGGGTCCATTTAAAGGTCTCAAACAGCTCAGAAGGATTGTGGAAGACTGCGTACAGAATATAATGCATCCTGTATACCATATAAAGACTCTCATGATGAAAAAAGAACTGGAGAAGGATCCAGCTCTTGCAAATGAAAGCTGGGATAGGTTTCTTCCCACATTCAGGAAGAAAAATGTTAAGCAAAAGAAACCCAAAAGCAAGGAGAAGAAGCCATACACACCTTTCCCACCTCCTCAACCACCTAGCAAGATTGATATGCAGTTGGAGTCTGGAGAATACTTCATGAGTGATAAAAAGAAGTCAGAGAAAAAATGGCAGGAGAAGCAAGAGAAACAGTCAGAGAAGAGCACAGAGAACAAAAGAAAGAGAGATGCCTCATTCCTCCCACCTGAGGAGCCTATGAACAACAATAGCAACGCAAACAAATCAGAGGATGGAAAGAATGATATAACCGAGTTAACAAATTCCTTGAAGAGCAAGACGAAGGAGTTGAAAAAGCAGAAAAAGACACACGAGAGAGTGAATGCGGAGGAGTATATTGCTGGTCCATCTTCTTCTGCTGATAAATCTTCCAAGAAGTCCAAAAAGATTAGAGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

391

Amino Acids

45.32

Weight (kDa)

9.53

Isoelectric Point (pI)

57.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KH_KRR1_1st PF17903 57 - 137 8.4e-32 Krr1 KH1 domain
KH_KRR1_2nd PF21800 139 - 230 1.2e-44 KRR1 small subunit processome component, second KH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000145)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G08420
fragaria_vesca FvH4_1g11160 FvH4_2g08143 FvH4_3g36450 FvH4_3g36450 FvH4_3g36450 FvH4_3g36450 FvH4_3g36460 FvH4_3g36460 FvH4_3g45301 FvH4_4g27690 FvH4_4g27690 FvH4_4g27690 FvH4_4g27690 FvH4_5g09160 FvH4_5g09161 FvH4_5g09380 FvH4_5g22900 FvH4_6g42520 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550
malus_domestica MD02G1015700.v1.1 MD02G1058900.v1.1 MD02G1059000.v1.1 MD03G1170900.v1.1 MD04G1231500.v1.1 MD13G1044300.v1.1 MD16G1045100.v1.1
prunus_persica Prupe.1G308200_v2.0.a1 Prupe.2G125300_v2.0.a1 Prupe.6G307800_v2.0.a1 Prupe.6G351700_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1
pyrus_communis pycom02g01420 pycom02g04810 pycom03g12790 pycom03g12800 pycom12g17840 pycom12g17850 pycom12g17860 pycom13g03890 pycom16g03970
rosa_chinensis RchiOBHm_Chr2g0090081 RchiOBHm_Chr3g0469061 RchiOBHm_Chr3g0469081 RchiOBHm_Chr4g0435531 RchiOBHm_Chr5g0014021 RchiOBHm_Chr5g0014031 RchiOBHm_Chr5g0014041 RchiOBHm_Chr7g0190151 RchiOBHm_Chr7g0190161 RchiOBHm_Chr7g0190171 RchiOBHm_Chr7g0210441
rosa_laevigata RLG00000003683 RLG00000003687 RLG00000003688 RLG00000004561 RLG00000004643 RLG00000016083 RLG00000021085 RLG00000024381 RLG00000032065 RLG00000032067 RLG00000032071 RLG00000032072 RLG00000032075
rosa_multiflora Rmu_co8284349.1_g000001 Rmu_co8324735.1_g000001 Rmu_co8355915.1_g000001 Rmu_co8388905.1_g000001 Rmu_sc0000302.1_g000041 Rmu_sc0000302.1_g000050 Rmu_sc0001940.1_g000034 Rmu_sc0003807.1_g000011 Rmu_sc0005803.1_g000001 Rmu_sc0005803.1_g000007 Rmu_sc0007139.1_g000007 Rmu_sc0007767.1_g000001 Rmu_sc0007767.1_g000003 Rmu_sc0007767.1_g000006 Rmu_sc0007933.1_g000005 Rmu_sc0008587.1_g000004 Rmu_sc0008968.1_g000004 Rmu_sc0018491.1_g000002 Rmu_sc0022420.1_g000001 Rmu_sc0027700.1_g000001 Rmu_sc0036218.1_g000001
rosa_roxburghii Rroxscaffold_1G00062590 Rroxscaffold_1G00062600 Rroxscaffold_1G00062620 Rroxscaffold_1G00062630 Rroxscaffold_1G00062640 Rroxscaffold_1G00062670 Rroxscaffold_1G00062680 Rroxscaffold_2G00091430 Rroxscaffold_2G00151410 Rroxscaffold_3G00245340 Rroxscaffold_3G00255390 Rroxscaffold_3G00264820 Rroxscaffold_3G00264830 Rroxscaffold_3G00265870 Rroxscaffold_5G00355140 Rroxscaffold_5G00376760 Rroxscaffold_6G00412230
rosa_rugosa Rorug02G0005200 Rorug02G0468300 Rorug02G0468300 Rorug02G0532400 Rorug03G0098900 Rorug03G0099000 Rorug03G0099400 Rorug04G0286000 Rorug05G0014400 Rorug05G0014500 Rorug05G0014600 Rorug05G0014600 Rorug05G0014600 Rorug05G0014800 Rorug05G0014900 Rorug05G0015000 Rorug05G0015100 Rorug05G0015100 Rorug05G0441300 Rorug06G0495300 Rorug06G0502600 Rorug06G0502700 Rorug07G0062300
rosa_samantha Rh2AG050900 Rh2BG049600 Rh2CG051800 Rh2CG234600 Rh2DG051100 Rh3BG171300 Rh3BG171800 Rh3CG336700 Rh3DG203600 Rh3DG203800 Rh4AG341600 Rh4AG341700 Rh4BG349900 Rh4CG364600 Rh4DG344200 Rh5AG108800 Rh5AG108900 Rh5AG109000 Rh5AG109100 Rh5BG105500 Rh5CG117300 Rh5CG117500 Rh5CG117600 Rh5DG104200 Rh5DG104400 Rh5DG104500 Rh5DG104600 Rh7BG102300 Rh7BG110600 Rh7BG110700 Rh7BG118900 Rh7CG103600 Rh7CG112800 Rh7CG113000 Rh7CG200300 Rh7CG271100 Rh7DG111300 Rh7DG111400 Rh7DG194400 Rh7DG261800 Rh7DG261900
rosa_wichuraiana Rw0G014550 Rw0G014580 Rw2G004580 Rw3G013980 Rw3G013990 Rw3G014000 Rw3G014020 Rw4G029810 Rw5G009500 Rw5G009510 Rw5G009520 Rw5G009530 Rw7G008640 Rw7G009350 Rw7G021680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 24
AccI GTMKAC 1 cut(s) 648
AciI CCGC 4 cut(s) 5, 484, 570, 1103
AclWI GGATC 4 cut(s) 128, 317, 686, 699
AcsI RAATTY 1 cut(s) 1039
AcuI CTGAAG 1 cut(s) 197
AfaI GTAC 3 cut(s) 254, 562, 627
AfiI CCNNNNNNNGG 3 cut(s) 587, 738, 967
AflII CTTAAG 1 cut(s) 245
AgsI TTSAA 5 cut(s) 236, 284, 514, 1048, 1069
AluBI AGCT 6 cut(s) 271, 344, 361, 601, 698, 714
AluI AGCT 6 cut(s) 271, 344, 361, 601, 698, 714
Alw21I GWGCWC 1 cut(s) 926
Alw26I GTCTC 1 cut(s) 596
AlwI GGATC 4 cut(s) 128, 317, 686, 699
AoxI GGCC 1 cut(s) 224
ApeKI GCWGC 1 cut(s) 481
ApoI RAATTY 1 cut(s) 1039
AspLEI GCGC 2 cut(s) 25, 520
AspS9I GGNCC 3 cut(s) 494, 578, 1121
AvaII GGWCC 3 cut(s) 494, 578, 1121
AxyI CCTNAGG 2 cut(s) 387, 966
BamHI GGATCC 1 cut(s) 691
BarI GAAGNNNNNNTAC 4 cut(s) 609, 641, 773, 805
BauI CACGAG 3 cut(s) 26, 71, 1088
BbsI GAAGAC 2 cut(s) 320, 624
Bbv12I GWGCWC 1 cut(s) 926
BbvI GCAGC 1 cut(s) 493
BccI CCATC 2 cut(s) 1004, 1132
BcoDI GTCTC 1 cut(s) 596
BfaI CTAG 4 cut(s) 228, 345, 548, 819
BfmI CTRYAG 1 cut(s) 564
BfoI RGCGCY 1 cut(s) 521
BfrI CTTAAG 1 cut(s) 245
BisI GCNGC 3 cut(s) 482, 485, 570
BlsI GCNGC 3 cut(s) 483, 486, 571
BmcAI AGTACT 1 cut(s) 562
Bme18I GGWCC 3 cut(s) 494, 578, 1121
BmgT120I GGNCC 3 cut(s) 494, 578, 1121
BmiI GGNNCC 5 cut(s) 146, 495, 579, 693, 972
BmsI GCATC 2 cut(s) 649, 937
BpiI GAAGAC 2 cut(s) 320, 624
BpmI CTGGAG 2 cut(s) 704, 867
BsaI GGTCTC 1 cut(s) 596
BsaJI CCNNGG 1 cut(s) 86
Bsc4I CCNNNNNNNGG 3 cut(s) 587, 738, 967
Bse1I ACTGG 2 cut(s) 157, 687
Bse21I CCTNAGG 2 cut(s) 387, 966
Bse3DI GCAATG 1 cut(s) 425
BseDI CCNNGG 1 cut(s) 86
BseGI GGATG 3 cut(s) 97, 640, 1015
BseLI CCNNNNNNNGG 3 cut(s) 587, 738, 967
BseMI GCAATG 1 cut(s) 425
BseMII CTCAG 3 cut(s) 401, 616, 957
BseNI ACTGG 2 cut(s) 157, 687
BseRI GAGGAG 6 cut(s) 29, 44, 375, 798, 983, 1121
BseXI GCAGC 1 cut(s) 493
BseYI CCCAGC 1 cut(s) 714
Bsh1285I CGRYCG 1 cut(s) 112
BshFI GGCC 1 cut(s) 226
BsiEI CGRYCG 1 cut(s) 112
BsiHKAI GWGCWC 1 cut(s) 926
BsiSI CCGG 1 cut(s) 137
BslFI GGGAC 1 cut(s) 362
BslI CCNNNNNNNGG 3 cut(s) 587, 738, 967
BsmAI GTCTC 1 cut(s) 596
BsmFI GGGAC 1 cut(s) 362
BsmI GAATGC 1 cut(s) 1105
BsnI GGCC 1 cut(s) 226
Bso31I GGTCTC 1 cut(s) 596
Bsp1286I GDGCHC 1 cut(s) 926
Bsp143I GATC 4 cut(s) 133, 322, 435, 691
Bsp19I CCATGG 1 cut(s) 86
BspACI CCGC 4 cut(s) 5, 484, 570, 1103
BspANI GGCC 1 cut(s) 226
BspCNI CTCAG 3 cut(s) 400, 615, 958
BspHI TCATGA 2 cut(s) 666, 858
BspLI GGNNCC 5 cut(s) 146, 495, 579, 693, 972
BspPI GGATC 4 cut(s) 128, 317, 686, 699
BspQI GCTCTTC 2 cut(s) 914, 1043
BspTI CTTAAG 1 cut(s) 245
BspTNI GGTCTC 1 cut(s) 596
BsrDI GCAATG 1 cut(s) 425
BsrI ACTGG 2 cut(s) 157, 687
BssECI CCNNGG 1 cut(s) 86
BssMI GATC 4 cut(s) 133, 322, 435, 691
BssNAI GTATAC 1 cut(s) 649
BssSI CACGAG 3 cut(s) 26, 71, 1088
BssT1I CCWWGG 1 cut(s) 86
Bst1107I GTATAC 1 cut(s) 649
Bst2BI CACGAG 3 cut(s) 26, 71, 1088
Bst4CI ACNGT 6 cut(s) 113, 257, 298, 539, 565, 912
Bst6I CTCTTC 3 cut(s) 41, 914, 1043
BstAFI CTTAAG 1 cut(s) 245
BstC8I GCNNGC 2 cut(s) 265, 269
BstDEI CTNAG 3 cut(s) 387, 602, 966
BstDSI CCRYGG 1 cut(s) 86
BstF5I GGATG 3 cut(s) 97, 640, 1015
BstH2I RGCGCY 1 cut(s) 521
BstHHI GCGC 2 cut(s) 25, 520
BstKTI GATC 4 cut(s) 136, 325, 438, 694
BstMAI GTCTC 1 cut(s) 596
BstMBI GATC 4 cut(s) 133, 322, 435, 691
BstMCI CGRYCG 1 cut(s) 112
BstMWI GCNNNNNNNGC 3 cut(s) 31, 389, 898
BstSFI CTRYAG 1 cut(s) 564
BstV1I GCAGC 1 cut(s) 493
BstV2I GAAGAC 2 cut(s) 320, 624
BstX2I RGATCY 2 cut(s) 322, 691
BstYI RGATCY 2 cut(s) 322, 691
BstZ17I GTATAC 1 cut(s) 649
Bsu36I CCTNAGG 2 cut(s) 387, 966
BsuRI GGCC 1 cut(s) 226
BtgI CCRYGG 1 cut(s) 86
BtsCI GGATG 3 cut(s) 97, 640, 1015
BtsIMutI CAGTG 1 cut(s) 150
Cac8I GCNNGC 2 cut(s) 265, 269
CciI TCATGA 2 cut(s) 666, 858
CfoI GCGC 2 cut(s) 25, 520
Cfr13I GGNCC 3 cut(s) 494, 578, 1121
Csp6I GTAC 3 cut(s) 253, 561, 626
CviAII CATG 4 cut(s) 87, 141, 667, 859
CviQI GTAC 3 cut(s) 253, 561, 626
DdeI CTNAG 3 cut(s) 387, 602, 966
DpnI GATC 4 cut(s) 135, 324, 437, 693
DpnII GATC 4 cut(s) 133, 322, 435, 691
DraI TTTAAA 1 cut(s) 586
Eam1104I CTCTTC 3 cut(s) 41, 914, 1043
EarI CTCTTC 3 cut(s) 41, 914, 1043
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 1 cut(s) 86
Eco31I GGTCTC 1 cut(s) 596
Eco32I GATATC 1 cut(s) 427
Eco47I GGWCC 3 cut(s) 494, 578, 1121
Eco57I CTGAAG 1 cut(s) 197
Eco81I CCTNAGG 2 cut(s) 387, 966
EcoO109I RGGNCCY 1 cut(s) 494
EcoRV GATATC 1 cut(s) 427
EcoT14I CCWWGG 1 cut(s) 86
EcoT22I ATGCAT 1 cut(s) 642
ErhI CCWWGG 1 cut(s) 86
FaeI CATG 4 cut(s) 90, 144, 670, 862
FalI AAGNNNNNCTT 2 cut(s) 260, 292
FaqI GGGAC 1 cut(s) 362
FatI CATG 4 cut(s) 86, 140, 666, 858
FblI GTMKAC 1 cut(s) 648
Fnu4HI GCNGC 3 cut(s) 482, 485, 570
FokI GGATG 3 cut(s) 104, 627, 1022
Fsp4HI GCNGC 3 cut(s) 482, 485, 570
FspBI CTAG 4 cut(s) 228, 345, 548, 819
FspI TGCGCA 1 cut(s) 24
GlaI GCGC 2 cut(s) 24, 519
GluI GCNGC 3 cut(s) 482, 485, 570
GsaI CCCAGC 1 cut(s) 718
GsuI CTGGAG 2 cut(s) 704, 867
HaeII RGCGCY 1 cut(s) 521
HaeIII GGCC 1 cut(s) 226
HapII CCGG 1 cut(s) 137
HhaI GCGC 2 cut(s) 25, 520
Hin1II CATG 4 cut(s) 90, 144, 670, 862
Hin6I GCGC 2 cut(s) 23, 518
HinP1I GCGC 2 cut(s) 23, 518
HincII GTYRAC 1 cut(s) 1035
HindII GTYRAC 1 cut(s) 1035
HindIII AAGCTT 1 cut(s) 359
HinfI GANTC 4 cut(s) 236, 400, 661, 842
HpaI GTTAAC 1 cut(s) 1035
HpaII CCGG 1 cut(s) 137
Hpy166II GTNNAC 3 cut(s) 68, 649, 1035
Hpy188I TCNGA 4 cut(s) 605, 880, 916, 1006
Hpy8I GTNNAC 3 cut(s) 68, 649, 1035
Hpy99I CGWCG 2 cut(s) 307, 310
HpyAV CCTTC 6 cut(s) 278, 471, 508, 600, 682, 1054
HpyCH4III ACNGT 6 cut(s) 113, 257, 298, 539, 565, 912
HpyCH4IV ACGT 1 cut(s) 173
HpyCH4V TGCA 5 cut(s) 267, 418, 640, 704, 835
HpyF10VI GCNNNNNNNGC 3 cut(s) 31, 389, 898
HpyF3I CTNAG 3 cut(s) 387, 602, 966
HpySE526I ACGT 1 cut(s) 173
Hsp92II CATG 4 cut(s) 90, 144, 670, 862
HspAI GCGC 2 cut(s) 23, 518
KspAI GTTAAC 1 cut(s) 1035
Kzo9I GATC 4 cut(s) 133, 322, 435, 691
LguI GCTCTTC 2 cut(s) 914, 1043
LmnI GCTCC 3 cut(s) 31, 388, 970
Lsp1109I GCAGC 1 cut(s) 493
LweI GCATC 2 cut(s) 649, 937
MaeI CTAG 4 cut(s) 228, 345, 548, 819
MaeII ACGT 1 cut(s) 173
MaeIII GTNAC 2 cut(s) 440, 539
MalI GATC 4 cut(s) 135, 324, 437, 693
MboI GATC 4 cut(s) 133, 322, 435, 691
MflI RGATCY 2 cut(s) 322, 691
MhlI GDGCHC 1 cut(s) 926
MluCI AATT 3 cut(s) 393, 499, 1039
MlyI GAGTC 2 cut(s) 655, 851
MmeI TCCRAC 2 cut(s) 95, 819
Mph1103I ATGCAT 1 cut(s) 642
MseI TTAA 9 cut(s) 246, 357, 396, 471, 530, 585, 753, 1034, 1174
MslI CAYNNNNRTG 1 cut(s) 155
MspA1I CMGCKG 1 cut(s) 484
MspCI CTTAAG 1 cut(s) 245
MspI CCGG 1 cut(s) 137
Mva1269I GAATGC 1 cut(s) 1105
MwoI GCNNNNNNNGC 3 cut(s) 31, 389, 898
NcoI CCATGG 1 cut(s) 86
NdeII GATC 4 cut(s) 133, 322, 435, 691
NlaIII CATG 4 cut(s) 90, 144, 670, 862
NlaIV GGNNCC 5 cut(s) 146, 495, 579, 693, 972
NsbI TGCGCA 1 cut(s) 24
NsiI ATGCAT 1 cut(s) 642
PagI TCATGA 2 cut(s) 666, 858
PciSI GCTCTTC 2 cut(s) 914, 1043
PctI GAATGC 1 cut(s) 1105
PfeI GAWTC 2 cut(s) 236, 400
PkrI GCNGC 3 cut(s) 483, 486, 571
PleI GAGTC 2 cut(s) 655, 850
PpsI GAGTC 2 cut(s) 655, 850
PpuMI RGGWCCY 1 cut(s) 494
Psp5II RGGWCCY 1 cut(s) 494
PspFI CCCAGC 1 cut(s) 714
PspN4I GGNNCC 5 cut(s) 146, 495, 579, 693, 972
PspPI GGNCC 3 cut(s) 494, 578, 1121
PspPPI RGGWCCY 1 cut(s) 494
PsuI RGATCY 2 cut(s) 322, 691
RsaI GTAC 3 cut(s) 254, 562, 627
RsaNI GTAC 3 cut(s) 253, 561, 626
RseI CAYNNNNRTG 1 cut(s) 155
SapI GCTCTTC 2 cut(s) 914, 1043
SaqAI TTAA 9 cut(s) 246, 357, 396, 471, 530, 585, 753, 1034, 1174
SatI GCNGC 3 cut(s) 482, 485, 570
Sau3AI GATC 4 cut(s) 133, 322, 435, 691
Sau96I GGNCC 3 cut(s) 494, 578, 1121
ScaI AGTACT 1 cut(s) 562
SchI GAGTC 2 cut(s) 655, 851
SduI GDGCHC 1 cut(s) 926
SfaNI GCATC 2 cut(s) 649, 937
SfcI CTRYAG 1 cut(s) 564
SinI GGWCC 3 cut(s) 494, 578, 1121
SmiMI CAYNNNNRTG 1 cut(s) 155
SmlI CTYRAG 1 cut(s) 245
SmoI CTYRAG 1 cut(s) 245
Sse9I AATT 3 cut(s) 393, 499, 1039
SsiI CCGC 4 cut(s) 5, 484, 570, 1103
SspI AATATT 1 cut(s) 528
SspMI CTAG 4 cut(s) 228, 345, 548, 819
StyI CCWWGG 1 cut(s) 86
TaaI ACNGT 6 cut(s) 113, 257, 298, 539, 565, 912
TaiI ACGT 1 cut(s) 176
TaqI TCGA 5 cut(s) 42, 108, 123, 302, 405
TasI AATT 3 cut(s) 393, 499, 1039
TatI WGTACW 1 cut(s) 560
TauI GCSGC 2 cut(s) 487, 572
TfiI GAWTC 2 cut(s) 236, 400
Tru1I TTAA 9 cut(s) 246, 357, 396, 471, 530, 585, 753, 1034, 1174
Tru9I TTAA 9 cut(s) 246, 357, 396, 471, 530, 585, 753, 1034, 1174
TscAI CASTG 1 cut(s) 157
TseI GCWGC 1 cut(s) 481
TspDTI ATGAA 4 cut(s) 686, 723, 847, 992
TspRI CASTG 1 cut(s) 157
Vha464I CTTAAG 1 cut(s) 245
VpaK11BI GGWCC 3 cut(s) 494, 578, 1121
XapI RAATTY 1 cut(s) 1039
XmiI GTMKAC 1 cut(s) 648
XspI CTAG 4 cut(s) 228, 345, 548, 819
ZrmI AGTACT 1 cut(s) 562
Zsp2I ATGCAT 1 cut(s) 642
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.