Rh7CG271100

rRNA processing

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0000145
Physical Location & Seq
Reverse (-)
26789907 .. 26792298
2392 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG271100.1

Sequence Viewer

Length: 1758 bp
ATGGAGAAAACAATGGTGGAGGAGAGCGATTCCGGCGTCCTCGAGCAGCCAAAAATCGATCACGTCGTTGCCGTCCCTATCCCGATAATGGAGAAGAGCGATTTCGGCGTCATTGATATGGTTGTTGGGGAGCCTGCTACCCGCGGGCCTATCCCGATGTCGAACAGCAGGTCTTTCCGTCCGATCTGCAATCAAAACCGAGCAAAGTTGGCAGAAGCTTGGCCGATGGTCAAATCGTCATTGGAAGAACTCGGGTATTCATGCACAATGAGTACGGTTGATTCCACAGTCGTAGTGGTATCACCCTGGTCTACAGCCCCAGATATGCGCAAGGCTGTTTATCTTTTCAAGCTTTTGTTCAAGACTCCTGTTCCGGCACCTCTGGCACTGGAGTTGGCACTCCATGGCAGGCAACATGATTTCATCAAGATTGGCACTCAAAAGGGTGTGCTATGCAAAAAATATGGGATCAAGAAGGAGAAATTTGATCAACTGCGGATACGTCTCAAACGCTCCTTAAAGGAACTTGGTGATATGACCCACTGTACTCTTTTTCTGAACAAGAGCACTCTTACTGCCGTGGGTCCATCTCCAAGATTACACTGGGTCAGGAAGGTTTTGAAATTCTGCGCTATTGAGAAGTTGAGTCCTGCACATGTTATTAGGGTTTTCAACCGGAAGCTGAAACGAAAAACAGCGATGATGAAGAACAGCGATACAGTGATGATGGAGAAAAGCGATTTCGGCATCCCTGAGCAGCCAAAAGTCAATCAGGAAGTTGGCGACCCTGTTCCGATGTTGAACAGCAGCGGGTCTTTCCGTCCGATCTCCAACACAAATCGAGCAAAGTTGACAGAAGCTTGGCCGATGGTCAATTTGTCCTTGGAAGAACTCGGGTATTCATGCGCAATGAGTACGGTTGATTCCACAGTCTTAGTGGTACCACCCTGTTCTACAGATCCAGATATCATGCGCAAGGCTAATTATCTTTTCCAGCTTTTATTCAAGACTCCTGTTCCGGCACCTCTGGCAATAGAGTTGGCGCTCCATGGCAGGCAACATGATCTCATCAAGCTTGGCGCTCAAAAGGGTGGGATATGCAAAAAATATGGGATCAAGAAGGAGAAATTTGATAAACTGTGGATACGTCTCAAACGCTCCTTAAAGGAACTTGGTGATCTGACCCATTGTACTCTATTTTTGAACAAGAGCACTCTTACTGCTGTGGGTCCATCTCCAAGATTACACTTGGTCAGGAAGGTTTTGGAAATCTGTATAAAAATAAAGATAAGTCCTGCAGATGTTATTAGCACGTTGATATGCAAGTATGATCAAAAAATTTCATTTGTTCGGGATCTTGATGTCTCTAATGTCAAGAAGACTGGCCATTTGGTGAACAAAGATGGTGCAGCTGAAGTGACATTGCCCTTTCTTGAAAGACGAGCAACAAGGATGGAAGGAGCTTTGTCAATGGTGGAGTCATCTTTTGAGAAATATGGCATTTCTTGCACACTGAATCTGATTAAGTGTACCGTGACTATCTCAACAATTGGAGCGACCAAAGAGTACCCGGATGCTTTTGAGAAAGCTAGGCATCTTTTGCAACTTTTGACAACAACTAATGTCCCGCCATCTCGGGCTGTAGAATTAGCGATGAATGGCATGAAGCATGAATTCATCGAGATTGGGTTTCAAGAAGGTGGGCTTTGCTCATTGTATGGAATCAAGAAGGAACAATATGTTAAACGGCGTAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

585

Amino Acids

65.47

Weight (kDa)

9.52

Isoelectric Point (pI)

36.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000145)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G08420
fragaria_vesca FvH4_1g11160 FvH4_2g08143 FvH4_3g36450 FvH4_3g36450 FvH4_3g36450 FvH4_3g36450 FvH4_3g36460 FvH4_3g36460 FvH4_3g45301 FvH4_4g27690 FvH4_4g27690 FvH4_4g27690 FvH4_4g27690 FvH4_5g09160 FvH4_5g09161 FvH4_5g09380 FvH4_5g22900 FvH4_6g42520 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550
malus_domestica MD02G1015700.v1.1 MD02G1058900.v1.1 MD02G1059000.v1.1 MD03G1170900.v1.1 MD04G1231500.v1.1 MD13G1044300.v1.1 MD16G1045100.v1.1
prunus_persica Prupe.1G308200_v2.0.a1 Prupe.2G125300_v2.0.a1 Prupe.6G307800_v2.0.a1 Prupe.6G351700_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1
pyrus_communis pycom02g01420 pycom02g04810 pycom03g12790 pycom03g12800 pycom12g17840 pycom12g17850 pycom12g17860 pycom13g03890 pycom16g03970
rosa_chinensis RchiOBHm_Chr2g0090081 RchiOBHm_Chr3g0469061 RchiOBHm_Chr3g0469081 RchiOBHm_Chr4g0435531 RchiOBHm_Chr5g0014021 RchiOBHm_Chr5g0014031 RchiOBHm_Chr5g0014041 RchiOBHm_Chr7g0190151 RchiOBHm_Chr7g0190161 RchiOBHm_Chr7g0190171 RchiOBHm_Chr7g0210441
rosa_laevigata RLG00000003683 RLG00000003687 RLG00000003688 RLG00000004561 RLG00000004643 RLG00000016083 RLG00000021085 RLG00000024381 RLG00000032065 RLG00000032067 RLG00000032071 RLG00000032072 RLG00000032075
rosa_multiflora Rmu_co8284349.1_g000001 Rmu_co8324735.1_g000001 Rmu_co8355915.1_g000001 Rmu_co8388905.1_g000001 Rmu_sc0000302.1_g000041 Rmu_sc0000302.1_g000050 Rmu_sc0001940.1_g000034 Rmu_sc0003807.1_g000011 Rmu_sc0005803.1_g000001 Rmu_sc0005803.1_g000007 Rmu_sc0007139.1_g000007 Rmu_sc0007767.1_g000001 Rmu_sc0007767.1_g000003 Rmu_sc0007767.1_g000006 Rmu_sc0007933.1_g000005 Rmu_sc0008587.1_g000004 Rmu_sc0008968.1_g000004 Rmu_sc0018491.1_g000002 Rmu_sc0022420.1_g000001 Rmu_sc0027700.1_g000001 Rmu_sc0036218.1_g000001
rosa_roxburghii Rroxscaffold_1G00062590 Rroxscaffold_1G00062600 Rroxscaffold_1G00062620 Rroxscaffold_1G00062630 Rroxscaffold_1G00062640 Rroxscaffold_1G00062670 Rroxscaffold_1G00062680 Rroxscaffold_2G00091430 Rroxscaffold_2G00151410 Rroxscaffold_3G00245340 Rroxscaffold_3G00255390 Rroxscaffold_3G00264820 Rroxscaffold_3G00264830 Rroxscaffold_3G00265870 Rroxscaffold_5G00355140 Rroxscaffold_5G00376760 Rroxscaffold_6G00412230
rosa_rugosa Rorug02G0005200 Rorug02G0468300 Rorug02G0468300 Rorug02G0532400 Rorug03G0098900 Rorug03G0099000 Rorug03G0099400 Rorug04G0286000 Rorug05G0014400 Rorug05G0014500 Rorug05G0014600 Rorug05G0014600 Rorug05G0014600 Rorug05G0014800 Rorug05G0014900 Rorug05G0015000 Rorug05G0015100 Rorug05G0015100 Rorug05G0441300 Rorug06G0495300 Rorug06G0502600 Rorug06G0502700 Rorug07G0062300
rosa_samantha Rh2AG050900 Rh2BG049600 Rh2CG051800 Rh2CG234600 Rh2DG051100 Rh3BG171300 Rh3BG171800 Rh3CG336700 Rh3DG203600 Rh3DG203800 Rh4AG341600 Rh4AG341700 Rh4BG349900 Rh4CG364600 Rh4DG344200 Rh5AG108800 Rh5AG108900 Rh5AG109000 Rh5AG109100 Rh5BG105500 Rh5CG117300 Rh5CG117500 Rh5CG117600 Rh5DG104200 Rh5DG104400 Rh5DG104500 Rh5DG104600 Rh7BG102300 Rh7BG110600 Rh7BG110700 Rh7BG118900 Rh7CG103600 Rh7CG112800 Rh7CG113000 Rh7CG200300 Rh7CG271100 Rh7DG111300 Rh7DG111400 Rh7DG194400 Rh7DG261800 Rh7DG261900
rosa_wichuraiana Rw0G014550 Rw0G014580 Rw2G004580 Rw3G013980 Rw3G013990 Rw3G014000 Rw3G014020 Rw4G029810 Rw5G009500 Rw5G009510 Rw5G009520 Rw5G009530 Rw7G008640 Rw7G009350 Rw7G021680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 3 cut(s) 329, 907, 974
Acc36I ACCTGC 1 cut(s) 159
Acc65I GGTACC 1 cut(s) 940
AccB1I GGYRCC 3 cut(s) 376, 940, 1021
AccI GTMKAC 1 cut(s) 311
AccII CGCG 1 cut(s) 144
AciI CCGC 5 cut(s) 142, 144, 496, 810, 1628
AclWI GGATC 4 cut(s) 476, 953, 1121, 1362
AcoI YGGCCR 3 cut(s) 221, 863, 1384
AcsI RAATTY 5 cut(s) 482, 623, 1127, 1338, 1673
AcuI CTGAAG 1 cut(s) 1434
AcyI GRCGYC 2 cut(s) 36, 108
AfaI GTAC 7 cut(s) 274, 547, 916, 942, 1192, 1531, 1568
AfiI CCNNNNNNNGG 1 cut(s) 88
AflIII ACRYGT 1 cut(s) 655
AgsI TTSAA 9 cut(s) 349, 361, 622, 673, 802, 1006, 1204, 1436, 1694
AjiI CACGTC 1 cut(s) 64
AjnI CCWGG 1 cut(s) 305
AluBI AGCT 9 cut(s) 218, 352, 682, 860, 997, 1075, 1412, 1463, 1589
AluI AGCT 9 cut(s) 218, 352, 682, 860, 997, 1075, 1412, 1463, 1589
Alw21I GWGCWC 2 cut(s) 569, 1214
Alw26I GTCTC 3 cut(s) 509, 1154, 1369
AlwI GGATC 4 cut(s) 476, 953, 1121, 1362
Ama87I CYCGRG 4 cut(s) 41, 251, 893, 1635
AoxI GGCC 4 cut(s) 146, 221, 863, 1384
ApeKI GCWGC 4 cut(s) 46, 757, 807, 1409
ApoI RAATTY 5 cut(s) 482, 623, 1127, 1338, 1673
ArsI GACNNNNNNTTYG 4 cut(s) 155, 187, 1372, 1404
Asp718I GGTACC 1 cut(s) 940
AspLEI GCGC 6 cut(s) 330, 632, 908, 975, 1045, 1082
AspS9I GGNCC 3 cut(s) 146, 584, 1229
AsuC2I CCSGG 1 cut(s) 1571
AsuHPI GGTGA 4 cut(s) 294, 542, 1187, 1405
AvaI CYCGRG 4 cut(s) 41, 251, 893, 1635
AvaII GGWCC 2 cut(s) 584, 1229
BalI TGGCCA 1 cut(s) 1386
BanI GGYRCC 3 cut(s) 376, 940, 1021
BbsI GAAGAC 1 cut(s) 1385
Bbv12I GWGCWC 2 cut(s) 569, 1214
BbvI GCAGC 4 cut(s) 58, 769, 819, 1421
BccI CCATC 8 cut(s) 220, 595, 721, 862, 1240, 1397, 1447, 1639
BceAI ACGGC 2 cut(s) 56, 563
BciT130I CCWGG 1 cut(s) 307
BciVI GTATCC 2 cut(s) 492, 1137
BclI TGATCA 2 cut(s) 487, 1330
BcnI CCSGG 1 cut(s) 1571
BcoDI GTCTC 3 cut(s) 509, 1154, 1369
BfaI CTAG 1 cut(s) 1590
BfmI CTRYAG 4 cut(s) 312, 954, 1296, 1641
BfoI RGCGCY 2 cut(s) 1046, 1083
BfuAI ACCTGC 1 cut(s) 159
BfuI GTATCC 2 cut(s) 492, 1137
BisI GCNGC 4 cut(s) 47, 758, 808, 1410
BlsI GCNGC 4 cut(s) 48, 759, 809, 1411
Bme1390I CCNGG 2 cut(s) 307, 1571
Bme18I GGWCC 2 cut(s) 584, 1229
BmeT110I CYCGRG 4 cut(s) 41, 251, 893, 1635
BmgBI CACGTC 1 cut(s) 64
BmgT120I GGNCC 3 cut(s) 146, 584, 1229
BmiI GGNNCC 6 cut(s) 132, 378, 585, 942, 1023, 1230
BmrFI CCNGG 2 cut(s) 307, 1571
BmrI ACTGGG 1 cut(s) 613
BmsI GCATC 3 cut(s) 756, 1564, 1603
BmuI ACTGGG 1 cut(s) 613
BpiI GAAGAC 1 cut(s) 1385
BpmI CTGGAG 1 cut(s) 410
Bpu10I CCTNAGC 1 cut(s) 753
BpuMI CCSGG 1 cut(s) 1571
Bsa29I ATCGAT 1 cut(s) 57
BsaHI GRCGYC 2 cut(s) 36, 108
BsaJI CCNNGG 6 cut(s) 142, 305, 403, 579, 882, 1048
BsaWI WCCGGW 1 cut(s) 675
Bsc4I CCNNNNNNNGG 1 cut(s) 88
Bse1I ACTGG 3 cut(s) 393, 608, 1387
Bse3DI GCAATG 2 cut(s) 915, 1421
BseBI CCWGG 1 cut(s) 307
BseCI ATCGAT 1 cut(s) 57
BseDI CCNNGG 6 cut(s) 142, 305, 403, 579, 882, 1048
BseGI GGATG 3 cut(s) 747, 1458, 1579
BseLI CCNNNNNNNGG 1 cut(s) 88
BseMI GCAATG 2 cut(s) 915, 1421
BseMII CTCAG 1 cut(s) 744
BseNI ACTGG 3 cut(s) 393, 608, 1387
BseRI GAGGAG 1 cut(s) 35
BseXI GCAGC 4 cut(s) 58, 769, 819, 1421
BsgI GTGCAG 2 cut(s) 636, 1428
Bsh1236I CGCG 1 cut(s) 144
BshFI GGCC 4 cut(s) 148, 223, 865, 1386
BshNI GGYRCC 3 cut(s) 376, 940, 1021
BshVI ATCGAT 1 cut(s) 57
BsiHKAI GWGCWC 2 cut(s) 569, 1214
BsiHKCI CYCGRG 4 cut(s) 41, 251, 893, 1635
BsiSI CCGG 5 cut(s) 33, 374, 676, 1019, 1571
BslFI GGGAC 2 cut(s) 59, 1610
BslI CCNNNNNNNGG 1 cut(s) 88
BsmAI GTCTC 3 cut(s) 509, 1154, 1369
BsmBI CGTCTC 2 cut(s) 509, 1154
BsmFI GGGAC 2 cut(s) 59, 1610
BsnI GGCC 4 cut(s) 148, 223, 865, 1386
BsoBI CYCGRG 4 cut(s) 41, 251, 893, 1635
Bsp1286I GDGCHC 2 cut(s) 569, 1214
Bsp19I CCATGG 2 cut(s) 403, 1048
BspACI CCGC 5 cut(s) 142, 144, 496, 810, 1628
BspANI GGCC 4 cut(s) 148, 223, 865, 1386
BspCNI CTCAG 1 cut(s) 745
BspDI ATCGAT 1 cut(s) 57
BspFNI CGCG 1 cut(s) 144
BspLI GGNNCC 6 cut(s) 132, 378, 585, 942, 1023, 1230
BspMAI CTGCAG 1 cut(s) 1300
BspMI ACCTGC 1 cut(s) 159
BspPI GGATC 4 cut(s) 476, 953, 1121, 1362
BspQI GCTCTTC 1 cut(s) 89
BspT107I GGYRCC 3 cut(s) 376, 940, 1021
BsrDI GCAATG 2 cut(s) 915, 1421
BsrI ACTGG 3 cut(s) 393, 608, 1387
BssECI CCNNGG 6 cut(s) 142, 305, 403, 579, 882, 1048
BssNI GRCGYC 2 cut(s) 36, 108
BssT1I CCWWGG 3 cut(s) 403, 882, 1048
Bst2UI CCWGG 1 cut(s) 307
Bst4CI ACNGT 8 cut(s) 277, 289, 545, 721, 919, 931, 1140, 1534
Bst6I CTCTTC 1 cut(s) 89
BstACI GRCGYC 2 cut(s) 36, 108
BstAPI GCANNNNNTGC 2 cut(s) 1506, 1600
BstC8I GCNNGC 4 cut(s) 135, 146, 410, 1055
BstDEI CTNAG 2 cut(s) 753, 934
BstDSI CCRYGG 4 cut(s) 142, 403, 579, 1048
BstF5I GGATG 3 cut(s) 747, 1458, 1579
BstFNI CGCG 1 cut(s) 144
BstH2I RGCGCY 2 cut(s) 1046, 1083
BstHHI GCGC 6 cut(s) 330, 632, 908, 975, 1045, 1082
BstMAI GTCTC 3 cut(s) 509, 1154, 1369
BstMWI GCNNNNNNNGC 8 cut(s) 33, 105, 209, 383, 744, 1028, 1506, 1600
BstNI CCWGG 1 cut(s) 307
BstNSI RCATGY 1 cut(s) 659
BstSCI CCNGG 2 cut(s) 305, 1569
BstSFI CTRYAG 4 cut(s) 312, 954, 1296, 1641
BstUI CGCG 1 cut(s) 144
BstV1I GCAGC 4 cut(s) 58, 769, 819, 1421
BstV2I GAAGAC 1 cut(s) 1385
BstX2I RGATCY 2 cut(s) 958, 1354
BstYI RGATCY 2 cut(s) 958, 1354
Bsu15I ATCGAT 1 cut(s) 57
BsuI GTATCC 2 cut(s) 492, 1137
BsuRI GGCC 4 cut(s) 148, 223, 865, 1386
BsuTUI ATCGAT 1 cut(s) 57
BtgI CCRYGG 4 cut(s) 142, 403, 579, 1048
BtgZI GCGATG 2 cut(s) 713, 1667
BtrI CACGTC 1 cut(s) 64
BtsCI GGATG 3 cut(s) 747, 1458, 1579
BtsIMutI CAGTG 5 cut(s) 386, 541, 601, 726, 1511
BveI ACCTGC 1 cut(s) 159
Cac8I GCNNGC 4 cut(s) 135, 146, 410, 1055
CfoI GCGC 6 cut(s) 330, 632, 908, 975, 1045, 1082
Cfr13I GGNCC 3 cut(s) 146, 584, 1229
Cfr42I CCGCGG 1 cut(s) 145
ClaI ATCGAT 1 cut(s) 57
CseI GACGC 2 cut(s) 25, 97
Csp6I GTAC 7 cut(s) 273, 546, 915, 941, 1191, 1530, 1567
CviQI GTAC 7 cut(s) 273, 546, 915, 941, 1191, 1530, 1567
DdeI CTNAG 2 cut(s) 753, 934
EaeI YGGCCR 3 cut(s) 221, 863, 1384
Eam1104I CTCTTC 1 cut(s) 89
EarI CTCTTC 1 cut(s) 89
Eco130I CCWWGG 3 cut(s) 403, 882, 1048
Eco32I GATATC 1 cut(s) 967
Eco47I GGWCC 2 cut(s) 584, 1229
Eco57I CTGAAG 1 cut(s) 1434
Eco88I CYCGRG 4 cut(s) 41, 251, 893, 1635
EcoRI GAATTC 1 cut(s) 1673
EcoRII CCWGG 1 cut(s) 305
EcoRV GATATC 1 cut(s) 967
EcoT14I CCWWGG 3 cut(s) 403, 882, 1048
ErhI CCWWGG 3 cut(s) 403, 882, 1048
Esp3I CGTCTC 2 cut(s) 509, 1154
FalI AAGNNNNNCTT 2 cut(s) 1689, 1721
FaqI GGGAC 2 cut(s) 59, 1610
FauI CCCGC 4 cut(s) 137, 149, 803, 1635
FbaI TGATCA 2 cut(s) 487, 1330
FblI GTMKAC 1 cut(s) 311
Fnu4HI GCNGC 4 cut(s) 47, 758, 808, 1410
FokI GGATG 3 cut(s) 734, 1465, 1586
Fsp4HI GCNGC 4 cut(s) 47, 758, 808, 1410
FspBI CTAG 1 cut(s) 1590
FspI TGCGCA 3 cut(s) 329, 907, 974
GlaI GCGC 6 cut(s) 329, 631, 907, 974, 1044, 1081
GluI GCNGC 4 cut(s) 47, 758, 808, 1410
GsuI CTGGAG 1 cut(s) 410
HaeII RGCGCY 2 cut(s) 1046, 1083
HaeIII GGCC 4 cut(s) 148, 223, 865, 1386
HapII CCGG 5 cut(s) 33, 374, 676, 1019, 1571
HgaI GACGC 2 cut(s) 25, 97
HhaI GCGC 6 cut(s) 330, 632, 908, 975, 1045, 1082
Hin1I GRCGYC 2 cut(s) 36, 108
Hin6I GCGC 6 cut(s) 328, 630, 906, 973, 1043, 1080
HinP1I GCGC 6 cut(s) 328, 630, 906, 973, 1043, 1080
HincII GTYRAC 1 cut(s) 852
HindII GTYRAC 1 cut(s) 852
HindIII AAGCTT 4 cut(s) 216, 350, 858, 1073
HinfI GANTC 9 cut(s) 29, 281, 364, 646, 923, 1009, 1478, 1516, 1722
HpaII CCGG 5 cut(s) 33, 374, 676, 1019, 1571
HphI GGTGA 4 cut(s) 294, 542, 1187, 1405
Hpy166II GTNNAC 4 cut(s) 312, 852, 1396, 1530
Hpy188I TCNGA 6 cut(s) 183, 558, 795, 825, 1182, 1521
Hpy8I GTNNAC 4 cut(s) 312, 852, 1396, 1530
Hpy99I CGWCG 1 cut(s) 68
HpyAV CCTTC 7 cut(s) 469, 607, 1114, 1252, 1451, 1691, 1723
HpyCH4III ACNGT 8 cut(s) 277, 289, 545, 721, 919, 931, 1140, 1534
HpyCH4IV ACGT 4 cut(s) 63, 502, 1147, 1313
HpyF10VI GCNNNNNNNGC 8 cut(s) 33, 105, 209, 383, 744, 1028, 1506, 1600
HpyF3I CTNAG 2 cut(s) 753, 934
HpySE526I ACGT 4 cut(s) 63, 502, 1147, 1313
Hsp92I GRCGYC 2 cut(s) 36, 108
HspAI GCGC 6 cut(s) 328, 630, 906, 973, 1043, 1080
KpnI GGTACC 1 cut(s) 944
Ksp22I TGATCA 2 cut(s) 487, 1330
KspI CCGCGG 1 cut(s) 145
LguI GCTCTTC 1 cut(s) 89
LmnI GCTCC 6 cut(s) 130, 518, 1050, 1163, 1460, 1553
Lsp1109I GCAGC 4 cut(s) 58, 769, 819, 1421
LweI GCATC 3 cut(s) 756, 1564, 1603
MaeI CTAG 1 cut(s) 1590
MaeII ACGT 4 cut(s) 63, 502, 1147, 1313
MaeIII GTNAC 2 cut(s) 1417, 1534
MboII GAAGA 5 cut(s) 106, 257, 718, 899, 1390
MfeI CAATTG 1 cut(s) 1548
MflI RGATCY 2 cut(s) 958, 1354
MhlI GDGCHC 2 cut(s) 569, 1214
MlsI TGGCCA 1 cut(s) 1386
MluCI AATT 9 cut(s) 482, 623, 874, 982, 1127, 1338, 1548, 1646, 1673
MluNI TGGCCA 1 cut(s) 1386
MlyI GAGTC 4 cut(s) 358, 655, 1003, 1487
MmeI TCCRAC 1 cut(s) 855
MnlI CCTC 4 cut(s) 13, 50, 390, 1035
Mox20I TGGCCA 1 cut(s) 1386
MscI TGGCCA 1 cut(s) 1386
MseI TTAA 4 cut(s) 518, 1163, 1524, 1743
MslI CAYNNNNRTG 1 cut(s) 116
Msp20I TGGCCA 1 cut(s) 1386
MspA1I CMGCKG 3 cut(s) 144, 810, 1412
MspI CCGG 5 cut(s) 33, 374, 676, 1019, 1571
MspR9I CCNGG 2 cut(s) 307, 1571
MunI CAATTG 1 cut(s) 1548
MvaI CCWGG 1 cut(s) 307
MvnI CGCG 1 cut(s) 144
MwoI GCNNNNNNNGC 8 cut(s) 33, 105, 209, 383, 744, 1028, 1506, 1600
NciI CCSGG 1 cut(s) 1571
NcoI CCATGG 2 cut(s) 403, 1048
NlaIV GGNNCC 6 cut(s) 132, 378, 585, 942, 1023, 1230
NmuCI GTSAC 2 cut(s) 1417, 1534
NsbI TGCGCA 3 cut(s) 329, 907, 974
NspI RCATGY 1 cut(s) 659
PaeR7I CTCGAG 1 cut(s) 41
PciI ACATGT 1 cut(s) 655
PciSI GCTCTTC 1 cut(s) 89
PcsI WCGNNNNNNNCGW 2 cut(s) 63, 69
PfeI GAWTC 5 cut(s) 29, 281, 923, 1516, 1722
PkrI GCNGC 4 cut(s) 48, 759, 809, 1411
PleI GAGTC 4 cut(s) 358, 654, 1003, 1486
PpsI GAGTC 4 cut(s) 358, 654, 1003, 1486
PscI ACATGT 1 cut(s) 655
Psp6I CCWGG 1 cut(s) 305
PspGI CCWGG 1 cut(s) 305
PspN4I GGNNCC 6 cut(s) 132, 378, 585, 942, 1023, 1230
PspPI GGNCC 3 cut(s) 146, 584, 1229
PspXI VCTCGAGB 1 cut(s) 41
PstI CTGCAG 1 cut(s) 1300
PsuI RGATCY 2 cut(s) 958, 1354
PvuII CAGCTG 1 cut(s) 1412
RsaI GTAC 7 cut(s) 274, 547, 916, 942, 1192, 1531, 1568
RsaNI GTAC 7 cut(s) 273, 546, 915, 941, 1191, 1530, 1567
RseI CAYNNNNRTG 1 cut(s) 116
SacII CCGCGG 1 cut(s) 145
SapI GCTCTTC 1 cut(s) 89
SaqAI TTAA 4 cut(s) 518, 1163, 1524, 1743
SatI GCNGC 4 cut(s) 47, 758, 808, 1410
Sau96I GGNCC 3 cut(s) 146, 584, 1229
SchI GAGTC 4 cut(s) 358, 655, 1003, 1487
ScrFI CCNGG 2 cut(s) 307, 1571
SduI GDGCHC 2 cut(s) 569, 1214
SfaNI GCATC 3 cut(s) 756, 1564, 1603
SfcI CTRYAG 4 cut(s) 312, 954, 1296, 1641
Sfr274I CTCGAG 1 cut(s) 41
Sfr303I CCGCGG 1 cut(s) 145
SgrBI CCGCGG 1 cut(s) 145
SinI GGWCC 2 cut(s) 584, 1229
SlaI CTCGAG 1 cut(s) 41
SmiMI CAYNNNNRTG 1 cut(s) 116
SmlI CTYRAG 1 cut(s) 41
SmoI CTYRAG 1 cut(s) 41
Sse9I AATT 9 cut(s) 482, 623, 874, 982, 1127, 1338, 1548, 1646, 1673
SsiI CCGC 5 cut(s) 142, 144, 496, 810, 1628
SspMI CTAG 1 cut(s) 1590
StyD4I CCNGG 2 cut(s) 305, 1569
StyI CCWWGG 3 cut(s) 403, 882, 1048
TaaI ACNGT 8 cut(s) 277, 289, 545, 721, 919, 931, 1140, 1534
TaiI ACGT 4 cut(s) 66, 505, 1150, 1316
TaqI TCGA 5 cut(s) 42, 57, 161, 841, 1680
TasI AATT 9 cut(s) 482, 623, 874, 982, 1127, 1338, 1548, 1646, 1673
TatI WGTACW 2 cut(s) 545, 1190
TfiI GAWTC 5 cut(s) 29, 281, 923, 1516, 1722
Tru1I TTAA 4 cut(s) 518, 1163, 1524, 1743
Tru9I TTAA 4 cut(s) 518, 1163, 1524, 1743
TscAI CASTG 5 cut(s) 393, 548, 608, 726, 1518
TseFI GTSAC 2 cut(s) 1417, 1534
TseI GCWGC 4 cut(s) 46, 757, 807, 1409
Tsp45I GTSAC 2 cut(s) 1417, 1534
TspDTI ATGAA 9 cut(s) 249, 412, 719, 891, 1332, 1666, 1670, 1679, 1686
TspGWI ACGGA 2 cut(s) 167, 809
TspRI CASTG 5 cut(s) 393, 548, 608, 726, 1518
VpaK11BI GGWCC 2 cut(s) 584, 1229
XapI RAATTY 5 cut(s) 482, 623, 1127, 1338, 1673
XceI RCATGY 1 cut(s) 659
XcmI CCANNNNNNNNNTGG 3 cut(s) 292, 600, 934
XhoI CTCGAG 1 cut(s) 41
XmiI GTMKAC 1 cut(s) 311
XspI CTAG 1 cut(s) 1590
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.