Rh7DG261800

rRNA processing

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0000145
Physical Location & Seq
Reverse (-)
27604626 .. 27606284
1659 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG261800.1

Sequence Viewer

Length: 1659 bp
ATGCGCAAGGCTAATTATCTTTTCCAGCTTTTATTCAAGACTCCTGTTCCGGCACCTCTGGCGATAGAGTTGGCGCTCCATGGCAGGCAACATGATCTCATCAAGCTTGGCGCTCAAAAGGGTGGGATATGCAAAAAATATGGGATCAACAAGGAGAAATTTGATAAACTGTGGATACGTCTCAAACGCTCCTTAAAGGAACTTGGTGATCTGACCCATTGTACTCTATTTTTGAACAAGAGCACTCTTACTGCCGTGGGTCCATCTCCGAGATTATGCTGGGTCAGGAAGGTTTTGAAAATTTGCATTACTGAAGAGTTGAGCCCTGCACATGTTATTAGGGTTTTCAACCGGAAGAAGAAACGAACAACAACGATGATGAAGAGCAGCGATACAATGATGATGGAGAAGAGTGATTCCGGCGTCCTTGAGCAGCCAAAATTCAGTCAGGAAGTTAGCGGGCCTGCTCCGTTGTTGAACAGCAGGTCTTTCTGTCCGATCTCCAATGAAAACCAAGCAAAGTTGAGAGAAGCTTGGCCAATGGTCAAATCGTCCTTAGAAGAACTTGGGTATTTATGTGCAATGAGTACGGTTGACTCCACAGTCTCACTGGTATTACCCTGGCCTACAGACCCAGGTATCATGCACAAGGCTGATTATCTTTTCAAACTTTTGTTGAAGACTCCTGTTCCGGCACCGCTGGCAATAGAGTTGGCACTCTTTGGCCGGAAACATGATCTCATCAAGCTTGGCACTCAAAAGGGTGGGATATGCAAAAAATATGGGATCAACAAGGAGAAAATTGATAAACTGCGGAGACGTCTCGAACACTCCTTAAAGGAACTTGGTGATCTGACCCAATGTACTCTTTTTCTGAACAAAAACACTCTTACTGCTGTGGGTCCATCTCCAAGATTACACTTGGTCAGGAGGGTTTTGGAAATCTGTATAAAAACAAAGATAAGTCCTGCAGATGTTATTAGCACGTTGATATGCAAGTATGATCAAAAAATTTCATTTGTTCGGGATCTTGATGTCTCTAATGTCAAGAAGACTGGCCATTTGGTGAACAAAGATGGTGCAGCTGAAGTGACATTGCCCTTTCTTGAAAGACGAGCAACAAGGATGGAAGGAGCTTTGTCAATGGTGGAGTCATCTTTTGAGAAATATGGCATTTCTTGCACACTGAATCTGATTAAGCGTACCGTGACTATCTCAACAACTGGAGCGACCAAAGAGTACCCGGAAGCTTTTGAGAAAGCTAGGCATGTTTTGCAACTTTTGACAACAACTAATGTCCCGCCATCTCGGGCTGTAGAATTAGCGATGAATGGCATGAAGCATGAATTCATCGAGATCGGGTTTCAAGAAGGTGGGCTTTGCTCATTGTATGGAATCAAGAAGGAACAATATGTTAAACGGCGTAAATGGCTCATTCGTTCTGCGAAGCGGATTCGAGAATTCACGGAGTGTGATATCTACTGCACAGGAGACACTATTACTGGTGTGAGTCCCTGTCTTGTGGGATTGAGTATGTTCAGGAGGATTGTGTTGACCTGCATTGTTGAAGATACGGATCCTGCACACCGTATAAGGAAATTTTTACGCTCAGAGTCGAAAAGGAAACTGAAGAAGATTATCAAGCGTTTGCTTGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

552

Amino Acids

62.45

Weight (kDa)

9.78

Isoelectric Point (pI)

46.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KH_KRR1_2nd PF21800 261 - 333 3.9e-07 KRR1 small subunit processome component, second KH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000145)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G08420
fragaria_vesca FvH4_1g11160 FvH4_2g08143 FvH4_3g36450 FvH4_3g36450 FvH4_3g36450 FvH4_3g36450 FvH4_3g36460 FvH4_3g36460 FvH4_3g45301 FvH4_4g27690 FvH4_4g27690 FvH4_4g27690 FvH4_4g27690 FvH4_5g09160 FvH4_5g09161 FvH4_5g09380 FvH4_5g22900 FvH4_6g42520 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550
malus_domestica MD02G1015700.v1.1 MD02G1058900.v1.1 MD02G1059000.v1.1 MD03G1170900.v1.1 MD04G1231500.v1.1 MD13G1044300.v1.1 MD16G1045100.v1.1
prunus_persica Prupe.1G308200_v2.0.a1 Prupe.2G125300_v2.0.a1 Prupe.6G307800_v2.0.a1 Prupe.6G351700_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1
pyrus_communis pycom02g01420 pycom02g04810 pycom03g12790 pycom03g12800 pycom12g17840 pycom12g17850 pycom12g17860 pycom13g03890 pycom16g03970
rosa_chinensis RchiOBHm_Chr2g0090081 RchiOBHm_Chr3g0469061 RchiOBHm_Chr3g0469081 RchiOBHm_Chr4g0435531 RchiOBHm_Chr5g0014021 RchiOBHm_Chr5g0014031 RchiOBHm_Chr5g0014041 RchiOBHm_Chr7g0190151 RchiOBHm_Chr7g0190161 RchiOBHm_Chr7g0190171 RchiOBHm_Chr7g0210441
rosa_laevigata RLG00000003683 RLG00000003687 RLG00000003688 RLG00000004561 RLG00000004643 RLG00000016083 RLG00000021085 RLG00000024381 RLG00000032065 RLG00000032067 RLG00000032071 RLG00000032072 RLG00000032075
rosa_multiflora Rmu_co8284349.1_g000001 Rmu_co8324735.1_g000001 Rmu_co8355915.1_g000001 Rmu_co8388905.1_g000001 Rmu_sc0000302.1_g000041 Rmu_sc0000302.1_g000050 Rmu_sc0001940.1_g000034 Rmu_sc0003807.1_g000011 Rmu_sc0005803.1_g000001 Rmu_sc0005803.1_g000007 Rmu_sc0007139.1_g000007 Rmu_sc0007767.1_g000001 Rmu_sc0007767.1_g000003 Rmu_sc0007767.1_g000006 Rmu_sc0007933.1_g000005 Rmu_sc0008587.1_g000004 Rmu_sc0008968.1_g000004 Rmu_sc0018491.1_g000002 Rmu_sc0022420.1_g000001 Rmu_sc0027700.1_g000001 Rmu_sc0036218.1_g000001
rosa_roxburghii Rroxscaffold_1G00062590 Rroxscaffold_1G00062600 Rroxscaffold_1G00062620 Rroxscaffold_1G00062630 Rroxscaffold_1G00062640 Rroxscaffold_1G00062670 Rroxscaffold_1G00062680 Rroxscaffold_2G00091430 Rroxscaffold_2G00151410 Rroxscaffold_3G00245340 Rroxscaffold_3G00255390 Rroxscaffold_3G00264820 Rroxscaffold_3G00264830 Rroxscaffold_3G00265870 Rroxscaffold_5G00355140 Rroxscaffold_5G00376760 Rroxscaffold_6G00412230
rosa_rugosa Rorug02G0005200 Rorug02G0468300 Rorug02G0468300 Rorug02G0532400 Rorug03G0098900 Rorug03G0099000 Rorug03G0099400 Rorug04G0286000 Rorug05G0014400 Rorug05G0014500 Rorug05G0014600 Rorug05G0014600 Rorug05G0014600 Rorug05G0014800 Rorug05G0014900 Rorug05G0015000 Rorug05G0015100 Rorug05G0015100 Rorug05G0441300 Rorug06G0495300 Rorug06G0502600 Rorug06G0502700 Rorug07G0062300
rosa_samantha Rh2AG050900 Rh2BG049600 Rh2CG051800 Rh2CG234600 Rh2DG051100 Rh3BG171300 Rh3BG171800 Rh3CG336700 Rh3DG203600 Rh3DG203800 Rh4AG341600 Rh4AG341700 Rh4BG349900 Rh4CG364600 Rh4DG344200 Rh5AG108800 Rh5AG108900 Rh5AG109000 Rh5AG109100 Rh5BG105500 Rh5CG117300 Rh5CG117500 Rh5CG117600 Rh5DG104200 Rh5DG104400 Rh5DG104500 Rh5DG104600 Rh7BG102300 Rh7BG110600 Rh7BG110700 Rh7BG118900 Rh7CG103600 Rh7CG112800 Rh7CG113000 Rh7CG200300 Rh7CG271100 Rh7DG111300 Rh7DG111400 Rh7DG194400 Rh7DG261800 Rh7DG261900
rosa_wichuraiana Rw0G014550 Rw0G014580 Rw2G004580 Rw3G013980 Rw3G013990 Rw3G014000 Rw3G014020 Rw4G029810 Rw5G009500 Rw5G009510 Rw5G009520 Rw5G009530 Rw7G008640 Rw7G009350 Rw7G021680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 602
AatII GACGTC 1 cut(s) 823
Acc16I TGCGCA 1 cut(s) 5
Acc36I ACCTGC 2 cut(s) 474, 1565
AccB1I GGYRCC 2 cut(s) 52, 694
AciI CCGC 5 cut(s) 459, 698, 814, 1301, 1450
AclWI GGATC 5 cut(s) 152, 794, 1035, 1571, 1584
AcoI YGGCCR 3 cut(s) 536, 724, 1057
AcsI RAATTY 7 cut(s) 158, 300, 440, 1011, 1346, 1460, 1598
AcuI CTGAAG 3 cut(s) 333, 1107, 1649
AcyI GRCGYC 2 cut(s) 423, 820
AdeI CACNNNGTG 1 cut(s) 1470
AfaI GTAC 5 cut(s) 223, 589, 865, 1204, 1241
AflIII ACRYGT 1 cut(s) 331
AjnI CCWGG 2 cut(s) 620, 634
AluBI AGCT 8 cut(s) 28, 106, 533, 748, 1085, 1136, 1250, 1262
AluI AGCT 8 cut(s) 28, 106, 533, 748, 1085, 1136, 1250, 1262
Alw21I GWGCWC 1 cut(s) 245
Alw26I GTCTC 6 cut(s) 185, 610, 811, 827, 1042, 1485
AlwI GGATC 5 cut(s) 152, 794, 1035, 1571, 1584
Ama87I CYCGRG 1 cut(s) 1308
AoxI GGCC 5 cut(s) 461, 536, 623, 724, 1057
ApeKI GCWGC 3 cut(s) 387, 433, 1082
ApoI RAATTY 7 cut(s) 158, 300, 440, 1011, 1346, 1460, 1598
ArsI GACNNNNNNTTYG 2 cut(s) 1045, 1077
AspLEI GCGC 3 cut(s) 6, 76, 113
AspS9I GGNCC 3 cut(s) 260, 461, 902
AsuC2I CCSGG 1 cut(s) 1244
AsuHPI GGTGA 3 cut(s) 218, 860, 1078
AvaI CYCGRG 1 cut(s) 1308
AvaII GGWCC 2 cut(s) 260, 902
BaeI ACNNNNGTAYC 2 cut(s) 622, 655
BalI TGGCCA 2 cut(s) 538, 1059
BamHI GGATCC 1 cut(s) 1576
BanI GGYRCC 2 cut(s) 52, 694
BanII GRGCYC 1 cut(s) 326
BbsI GAAGAC 2 cut(s) 686, 1058
Bbv12I GWGCWC 1 cut(s) 245
BbvI GCAGC 3 cut(s) 399, 445, 1094
BccI CCATC 6 cut(s) 271, 397, 913, 1070, 1120, 1312
BceAI ACGGC 2 cut(s) 239, 1436
BciT130I CCWGG 2 cut(s) 622, 636
BciVI GTATCC 1 cut(s) 168
BclI TGATCA 1 cut(s) 1003
BcnI CCSGG 1 cut(s) 1244
BcoDI GTCTC 6 cut(s) 185, 610, 811, 827, 1042, 1485
BfaI CTAG 1 cut(s) 1263
BfmI CTRYAG 3 cut(s) 627, 969, 1314
BfoI RGCGCY 2 cut(s) 77, 114
BfuAI ACCTGC 2 cut(s) 474, 1565
BfuI GTATCC 1 cut(s) 168
BisI GCNGC 3 cut(s) 388, 434, 1083
BlsI GCNGC 3 cut(s) 389, 435, 1084
Bme1390I CCNGG 3 cut(s) 622, 636, 1244
Bme18I GGWCC 2 cut(s) 260, 902
BmeT110I CYCGRG 1 cut(s) 1308
BmgT120I GGNCC 3 cut(s) 260, 461, 902
BmiI GGNNCC 5 cut(s) 54, 261, 696, 903, 1578
BmrFI CCNGG 3 cut(s) 622, 636, 1244
BpiI GAAGAC 2 cut(s) 686, 1058
BpmI CTGGAG 1 cut(s) 1245
BpuEI CTTGAG 1 cut(s) 449
BpuMI CCSGG 1 cut(s) 1244
BsaBI GATNNNNATC 1 cut(s) 1575
BsaHI GRCGYC 2 cut(s) 423, 820
BsaJI CCNNGG 4 cut(s) 79, 255, 620, 634
BsaWI WCCGGW 1 cut(s) 351
Bse1I ACTGG 4 cut(s) 615, 1060, 1228, 1507
Bse3DI GCAATG 2 cut(s) 588, 1094
Bse8I GATNNNNATC 1 cut(s) 1575
BseBI CCWGG 2 cut(s) 622, 636
BseDI CCNNGG 4 cut(s) 79, 255, 620, 634
BseGI GGATG 1 cut(s) 1131
BseJI GATNNNNATC 1 cut(s) 1575
BseMI GCAATG 2 cut(s) 588, 1094
BseMII CTCAG 1 cut(s) 1623
BseNI ACTGG 4 cut(s) 615, 1060, 1228, 1507
BseXI GCAGC 3 cut(s) 399, 445, 1094
BseYI CCCAGC 1 cut(s) 279
BsgI GTGCAG 4 cut(s) 312, 1101, 1468, 1566
BshFI GGCC 5 cut(s) 463, 538, 625, 726, 1059
BshNI GGYRCC 2 cut(s) 52, 694
BsiHKAI GWGCWC 1 cut(s) 245
BsiHKCI CYCGRG 1 cut(s) 1308
BsiSI CCGG 6 cut(s) 50, 352, 420, 692, 727, 1244
BslFI GGGAC 2 cut(s) 1283, 1497
BsmAI GTCTC 6 cut(s) 185, 610, 811, 827, 1042, 1485
BsmBI CGTCTC 3 cut(s) 185, 811, 827
BsmFI GGGAC 2 cut(s) 1283, 1497
BsnI GGCC 5 cut(s) 463, 538, 625, 726, 1059
BsoBI CYCGRG 1 cut(s) 1308
Bsp1286I GDGCHC 2 cut(s) 245, 326
Bsp19I CCATGG 1 cut(s) 79
BspACI CCGC 5 cut(s) 459, 698, 814, 1301, 1450
BspANI GGCC 5 cut(s) 463, 538, 625, 726, 1059
BspCNI CTCAG 1 cut(s) 1622
BspLI GGNNCC 5 cut(s) 54, 261, 696, 903, 1578
BspMAI CTGCAG 1 cut(s) 973
BspMI ACCTGC 2 cut(s) 474, 1565
BspPI GGATC 5 cut(s) 152, 794, 1035, 1571, 1584
BspQI GCTCTTC 1 cut(s) 377
BspT107I GGYRCC 2 cut(s) 52, 694
BsrDI GCAATG 2 cut(s) 588, 1094
BsrI ACTGG 4 cut(s) 615, 1060, 1228, 1507
BssECI CCNNGG 4 cut(s) 79, 255, 620, 634
BssNI GRCGYC 2 cut(s) 423, 820
BssT1I CCWWGG 1 cut(s) 79
Bst2UI CCWGG 2 cut(s) 622, 636
Bst4CI ACNGT 5 cut(s) 171, 592, 604, 1207, 1589
Bst6I CTCTTC 3 cut(s) 309, 377, 404
BstACI GRCGYC 2 cut(s) 423, 820
BstAPI GCANNNNNTGC 2 cut(s) 1179, 1273
BstC8I GCNNGC 4 cut(s) 86, 461, 465, 702
BstDEI CTNAG 2 cut(s) 556, 1609
BstDSI CCRYGG 2 cut(s) 79, 255
BstF5I GGATG 1 cut(s) 1131
BstH2I RGCGCY 2 cut(s) 77, 114
BstHHI GCGC 3 cut(s) 6, 76, 113
BstMAI GTCTC 6 cut(s) 185, 610, 811, 827, 1042, 1485
BstMWI GCNNNNNNNGC 5 cut(s) 59, 701, 1179, 1273, 1429
BstNI CCWGG 2 cut(s) 622, 636
BstNSI RCATGY 2 cut(s) 335, 1271
BstSCI CCNGG 3 cut(s) 620, 634, 1242
BstSFI CTRYAG 3 cut(s) 627, 969, 1314
BstV1I GCAGC 3 cut(s) 399, 445, 1094
BstV2I GAAGAC 2 cut(s) 686, 1058
BstX2I RGATCY 2 cut(s) 1027, 1576
BstYI RGATCY 2 cut(s) 1027, 1576
BsuI GTATCC 1 cut(s) 168
BsuRI GGCC 5 cut(s) 463, 538, 625, 726, 1059
BtgI CCRYGG 2 cut(s) 79, 255
BtgZI GCGATG 1 cut(s) 1340
BtsCI GGATG 1 cut(s) 1131
BtsIMutI CAGTG 2 cut(s) 608, 1184
BveI ACCTGC 2 cut(s) 474, 1565
Cac8I GCNNGC 4 cut(s) 86, 461, 465, 702
CfoI GCGC 3 cut(s) 6, 76, 113
Cfr13I GGNCC 3 cut(s) 260, 461, 902
CseI GACGC 1 cut(s) 412
Csp6I GTAC 5 cut(s) 222, 588, 864, 1203, 1240
CviAII CATG 8 cut(s) 80, 92, 332, 643, 734, 1268, 1336, 1343
CviQI GTAC 5 cut(s) 222, 588, 864, 1203, 1240
DdeI CTNAG 2 cut(s) 556, 1609
DraIII CACNNNGTG 1 cut(s) 1470
DrdI GACNNNNNNGTC 1 cut(s) 602
DseDI GACNNNNNNGTC 1 cut(s) 602
EaeI YGGCCR 3 cut(s) 536, 724, 1057
Eam1104I CTCTTC 3 cut(s) 309, 377, 404
EarI CTCTTC 3 cut(s) 309, 377, 404
Eco130I CCWWGG 1 cut(s) 79
Eco24I GRGCYC 1 cut(s) 326
Eco32I GATATC 1 cut(s) 1477
Eco47I GGWCC 2 cut(s) 260, 902
Eco57I CTGAAG 3 cut(s) 333, 1107, 1649
Eco88I CYCGRG 1 cut(s) 1308
EcoRI GAATTC 2 cut(s) 1346, 1460
EcoRII CCWGG 2 cut(s) 620, 634
EcoRV GATATC 1 cut(s) 1477
EcoT14I CCWWGG 1 cut(s) 79
EcoT38I GRGCYC 1 cut(s) 326
ErhI CCWWGG 1 cut(s) 79
Esp3I CGTCTC 3 cut(s) 185, 811, 827
FaeI CATG 8 cut(s) 83, 95, 335, 646, 737, 1271, 1339, 1346
FalI AAGNNNNNCTT 2 cut(s) 1362, 1394
FaqI GGGAC 2 cut(s) 1283, 1497
FatI CATG 8 cut(s) 79, 91, 331, 642, 733, 1267, 1335, 1342
FauI CCCGC 2 cut(s) 452, 1308
FbaI TGATCA 1 cut(s) 1003
Fnu4HI GCNGC 3 cut(s) 388, 434, 1083
FokI GGATG 1 cut(s) 1138
FriOI GRGCYC 1 cut(s) 326
Fsp4HI GCNGC 3 cut(s) 388, 434, 1083
FspBI CTAG 1 cut(s) 1263
FspI TGCGCA 1 cut(s) 5
GlaI GCGC 3 cut(s) 5, 75, 112
GluI GCNGC 3 cut(s) 388, 434, 1083
GsaI CCCAGC 1 cut(s) 283
GsuI CTGGAG 1 cut(s) 1245
HaeII RGCGCY 2 cut(s) 77, 114
HaeIII GGCC 5 cut(s) 463, 538, 625, 726, 1059
HapII CCGG 6 cut(s) 50, 352, 420, 692, 727, 1244
HgaI GACGC 1 cut(s) 412
HhaI GCGC 3 cut(s) 6, 76, 113
Hin1I GRCGYC 2 cut(s) 423, 820
Hin1II CATG 8 cut(s) 83, 95, 335, 646, 737, 1271, 1339, 1346
Hin6I GCGC 3 cut(s) 4, 74, 111
HinP1I GCGC 3 cut(s) 4, 74, 111
HincII GTYRAC 2 cut(s) 595, 1554
HindII GTYRAC 2 cut(s) 595, 1554
HindIII AAGCTT 4 cut(s) 104, 531, 746, 1248
HpaII CCGG 6 cut(s) 50, 352, 420, 692, 727, 1244
HphI GGTGA 3 cut(s) 218, 860, 1078
Hpy166II GTNNAC 3 cut(s) 595, 1069, 1554
Hpy188I TCNGA 8 cut(s) 213, 270, 498, 855, 876, 1194, 1612, 1658
Hpy8I GTNNAC 3 cut(s) 595, 1069, 1554
HpyAV CCTTC 4 cut(s) 283, 1124, 1364, 1396
HpyCH4III ACNGT 5 cut(s) 171, 592, 604, 1207, 1589
HpyCH4IV ACGT 3 cut(s) 178, 820, 986
HpyF10VI GCNNNNNNNGC 5 cut(s) 59, 701, 1179, 1273, 1429
HpyF3I CTNAG 2 cut(s) 556, 1609
HpySE526I ACGT 3 cut(s) 178, 820, 986
Hsp92I GRCGYC 2 cut(s) 423, 820
Hsp92II CATG 8 cut(s) 83, 95, 335, 646, 737, 1271, 1339, 1346
HspAI GCGC 3 cut(s) 4, 74, 111
Ksp22I TGATCA 1 cut(s) 1003
LguI GCTCTTC 1 cut(s) 377
LmnI GCTCC 5 cut(s) 81, 194, 472, 1133, 1226
Lsp1109I GCAGC 3 cut(s) 399, 445, 1094
MaeI CTAG 1 cut(s) 1263
MaeII ACGT 3 cut(s) 178, 820, 986
MaeIII GTNAC 2 cut(s) 1090, 1207
MflI RGATCY 2 cut(s) 1027, 1576
MhlI GDGCHC 2 cut(s) 245, 326
MlsI TGGCCA 2 cut(s) 538, 1059
MluNI TGGCCA 2 cut(s) 538, 1059
MlyI GAGTC 6 cut(s) 34, 590, 676, 1160, 1519, 1622
MnlI CCTC 3 cut(s) 66, 924, 1536
Mox20I TGGCCA 2 cut(s) 538, 1059
MscI TGGCCA 2 cut(s) 538, 1059
MseI TTAA 4 cut(s) 194, 836, 1197, 1416
Msp20I TGGCCA 2 cut(s) 538, 1059
MspA1I CMGCKG 2 cut(s) 700, 1085
MspI CCGG 6 cut(s) 50, 352, 420, 692, 727, 1244
MspR9I CCNGG 3 cut(s) 622, 636, 1244
MvaI CCWGG 2 cut(s) 622, 636
MwoI GCNNNNNNNGC 5 cut(s) 59, 701, 1179, 1273, 1429
NciI CCSGG 1 cut(s) 1244
NcoI CCATGG 1 cut(s) 79
NlaIII CATG 8 cut(s) 83, 95, 335, 646, 737, 1271, 1339, 1346
NlaIV GGNNCC 5 cut(s) 54, 261, 696, 903, 1578
NmuCI GTSAC 2 cut(s) 1090, 1207
NsbI TGCGCA 1 cut(s) 5
NspI RCATGY 2 cut(s) 335, 1271
PciI ACATGT 1 cut(s) 331
PciSI GCTCTTC 1 cut(s) 377
PfeI GAWTC 4 cut(s) 416, 1189, 1395, 1453
PkrI GCNGC 3 cut(s) 389, 435, 1084
PleI GAGTC 6 cut(s) 34, 590, 676, 1159, 1518, 1621
PpsI GAGTC 6 cut(s) 34, 590, 676, 1159, 1518, 1621
PscI ACATGT 1 cut(s) 331
Psp6I CCWGG 2 cut(s) 620, 634
PspFI CCCAGC 1 cut(s) 279
PspGI CCWGG 2 cut(s) 620, 634
PspN4I GGNNCC 5 cut(s) 54, 261, 696, 903, 1578
PspPI GGNCC 3 cut(s) 260, 461, 902
PstI CTGCAG 1 cut(s) 973
PsuI RGATCY 2 cut(s) 1027, 1576
PvuII CAGCTG 1 cut(s) 1085
RsaI GTAC 5 cut(s) 223, 589, 865, 1204, 1241
RsaNI GTAC 5 cut(s) 222, 588, 864, 1203, 1240
SapI GCTCTTC 1 cut(s) 377
SaqAI TTAA 4 cut(s) 194, 836, 1197, 1416
SatI GCNGC 3 cut(s) 388, 434, 1083
Sau96I GGNCC 3 cut(s) 260, 461, 902
SchI GAGTC 6 cut(s) 34, 590, 676, 1160, 1519, 1622
ScrFI CCNGG 3 cut(s) 622, 636, 1244
SduI GDGCHC 2 cut(s) 245, 326
SfcI CTRYAG 3 cut(s) 627, 969, 1314
SinI GGWCC 2 cut(s) 260, 902
SmlI CTYRAG 1 cut(s) 428
SmoI CTYRAG 1 cut(s) 428
SsiI CCGC 5 cut(s) 459, 698, 814, 1301, 1450
SspMI CTAG 1 cut(s) 1263
StyD4I CCNGG 3 cut(s) 620, 634, 1242
StyI CCWWGG 1 cut(s) 79
TaaI ACNGT 5 cut(s) 171, 592, 604, 1207, 1589
TaiI ACGT 3 cut(s) 181, 823, 989
TaqI TCGA 4 cut(s) 825, 1353, 1456, 1616
TatI WGTACW 2 cut(s) 221, 863
TfiI GAWTC 4 cut(s) 416, 1189, 1395, 1453
Tru1I TTAA 4 cut(s) 194, 836, 1197, 1416
Tru9I TTAA 4 cut(s) 194, 836, 1197, 1416
TscAI CASTG 2 cut(s) 615, 1191
TseFI GTSAC 2 cut(s) 1090, 1207
TseI GCWGC 3 cut(s) 387, 433, 1082
Tsp45I GTSAC 2 cut(s) 1090, 1207
TspDTI ATGAA 7 cut(s) 395, 522, 1005, 1339, 1343, 1352, 1359
TspGWI ACGGA 3 cut(s) 459, 1481, 1589
TspRI CASTG 2 cut(s) 615, 1191
VpaK11BI GGWCC 2 cut(s) 260, 902
XapI RAATTY 7 cut(s) 158, 300, 440, 1011, 1346, 1460, 1598
XceI RCATGY 2 cut(s) 335, 1271
XcmI CCANNNNNNNNNTGG 1 cut(s) 607
XspI CTAG 1 cut(s) 1263
ZraI GACGTC 1 cut(s) 821
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.