Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 56 |
| AclWI | GGATC | 1 cut(s) | 84 |
| AcoI | YGGCCR | 1 cut(s) | 179 |
| AcyI | GRCGYC | 1 cut(s) | 241 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 97 |
| AgsI | TTSAA | 4 cut(s) | 119, 229, 258, 314 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 28, 60 |
| AluBI | AGCT | 1 cut(s) | 176 |
| AluI | AGCT | 1 cut(s) | 176 |
| AlwI | GGATC | 1 cut(s) | 84 |
| AoxI | GGCC | 3 cut(s) | 88, 151, 179 |
| AspS9I | GGNCC | 2 cut(s) | 49, 89 |
| AsuHPI | GGTGA | 1 cut(s) | 17 |
| AvaII | GGWCC | 1 cut(s) | 49 |
| BccI | CCATC | 1 cut(s) | 149 |
| BceAI | ACGGC | 2 cut(s) | 166, 249 |
| Bme18I | GGWCC | 1 cut(s) | 49 |
| BmgT120I | GGNCC | 2 cut(s) | 49, 89 |
| BmiI | GGNNCC | 2 cut(s) | 50, 51 |
| BsaHI | GRCGYC | 1 cut(s) | 241 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 97 |
| Bse3DI | GCAATG | 1 cut(s) | 330 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 97 |
| BseMI | GCAATG | 1 cut(s) | 330 |
| BseMII | CTCAG | 1 cut(s) | 153 |
| BseYI | CCCAGC | 1 cut(s) | 236 |
| BsgI | GTGCAG | 2 cut(s) | 188, 209 |
| BshFI | GGCC | 3 cut(s) | 90, 153, 181 |
| BslFI | GGGAC | 1 cut(s) | 62 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 97 |
| BsmFI | GGGAC | 1 cut(s) | 62 |
| BsnI | GGCC | 3 cut(s) | 90, 153, 181 |
| Bsp143I | GATC | 1 cut(s) | 76 |
| BspANI | GGCC | 3 cut(s) | 90, 153, 181 |
| BspCNI | CTCAG | 1 cut(s) | 154 |
| BspLI | GGNNCC | 2 cut(s) | 50, 51 |
| BspPI | GGATC | 1 cut(s) | 84 |
| BsrDI | GCAATG | 1 cut(s) | 330 |
| BssMI | GATC | 1 cut(s) | 76 |
| BssNI | GRCGYC | 1 cut(s) | 241 |
| BstACI | GRCGYC | 1 cut(s) | 241 |
| BstC8I | GCNNGC | 1 cut(s) | 113 |
| BstDEI | CTNAG | 1 cut(s) | 162 |
| BstKTI | GATC | 1 cut(s) | 79 |
| BstMBI | GATC | 1 cut(s) | 76 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 187, 219 |
| BstNSI | RCATGY | 1 cut(s) | 115 |
| BsuRI | GGCC | 3 cut(s) | 90, 153, 181 |
| BtsI | GCAGTG | 1 cut(s) | 197 |
| BtsIMutI | CAGTG | 1 cut(s) | 197 |
| Cac8I | GCNNGC | 1 cut(s) | 113 |
| Cfr13I | GGNCC | 2 cut(s) | 49, 89 |
| CseI | GACGC | 1 cut(s) | 230 |
| CviAII | CATG | 5 cut(s) | 67, 112, 203, 209, 333 |
| CviJI | RGCY | 5 cut(s) | 90, 153, 176, 181, 236 |
| CviKI_1 | RGCY | 5 cut(s) | 90, 153, 176, 181, 236 |
| DdeI | CTNAG | 1 cut(s) | 162 |
| DpnI | GATC | 1 cut(s) | 78 |
| DpnII | GATC | 1 cut(s) | 76 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 56 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 56 |
| EaeI | YGGCCR | 1 cut(s) | 179 |
| Eco47I | GGWCC | 1 cut(s) | 49 |
| EcoO109I | RGGNCCY | 1 cut(s) | 49 |
| FaeI | CATG | 5 cut(s) | 70, 115, 206, 212, 336 |
| FaiI | YATR | 8 cut(s) | 68, 106, 108, 113, 204, 210, 290, 334 |
| FaqI | GGGAC | 1 cut(s) | 62 |
| FatI | CATG | 5 cut(s) | 66, 111, 202, 208, 332 |
| FauNDI | CATATG | 1 cut(s) | 106 |
| GsaI | CCCAGC | 1 cut(s) | 240 |
| HaeIII | GGCC | 3 cut(s) | 90, 153, 181 |
| HgaI | GACGC | 1 cut(s) | 230 |
| Hin1I | GRCGYC | 1 cut(s) | 241 |
| Hin1II | CATG | 5 cut(s) | 70, 115, 206, 212, 336 |
| HindIII | AAGCTT | 1 cut(s) | 174 |
| HinfI | GANTC | 2 cut(s) | 101, 277 |
| HphI | GGTGA | 1 cut(s) | 17 |
| Hpy188I | TCNGA | 1 cut(s) | 81 |
| Hpy188III | TCNNGA | 2 cut(s) | 281, 311 |
| Hpy99I | CGWCG | 1 cut(s) | 246 |
| HpyAV | CCTTC | 1 cut(s) | 25 |
| HpyCH4IV | ACGT | 1 cut(s) | 57 |
| HpyCH4V | TGCA | 2 cut(s) | 169, 190 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 187, 219 |
| HpyF3I | CTNAG | 1 cut(s) | 162 |
| HpySE526I | ACGT | 1 cut(s) | 57 |
| Hsp92I | GRCGYC | 1 cut(s) | 241 |
| Hsp92II | CATG | 5 cut(s) | 70, 115, 206, 212, 336 |
| KflI | GGGWCCC | 1 cut(s) | 49 |
| Kzo9I | GATC | 1 cut(s) | 76 |
| LpnPI | CCDG | 5 cut(s) | 135, 155, 222, 277, 294 |
| MaeII | ACGT | 1 cut(s) | 57 |
| MaeIII | GTNAC | 1 cut(s) | 121 |
| MalI | GATC | 1 cut(s) | 78 |
| MboI | GATC | 1 cut(s) | 76 |
| MluCI | AATT | 1 cut(s) | 252 |
| MnlI | CCTC | 2 cut(s) | 136, 157 |
| MslI | CAYNNNNRTG | 2 cut(s) | 71, 207 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 187, 219 |
| NdeI | CATATG | 1 cut(s) | 106 |
| NdeII | GATC | 1 cut(s) | 76 |
| NlaIII | CATG | 5 cut(s) | 70, 115, 206, 212, 336 |
| NlaIV | GGNNCC | 2 cut(s) | 50, 51 |
| NmeAIII | GCCGAG | 1 cut(s) | 179 |
| NspI | RCATGY | 1 cut(s) | 115 |
| PaeI | GCATGC | 1 cut(s) | 115 |
| PfeI | GAWTC | 2 cut(s) | 101, 277 |
| PpuMI | RGGWCCY | 1 cut(s) | 49 |
| Psp5II | RGGWCCY | 1 cut(s) | 49 |
| PspFI | CCCAGC | 1 cut(s) | 236 |
| PspN4I | GGNNCC | 2 cut(s) | 50, 51 |
| PspPI | GGNCC | 2 cut(s) | 49, 89 |
| PspPPI | RGGWCCY | 1 cut(s) | 49 |
| RseI | CAYNNNNRTG | 2 cut(s) | 71, 207 |
| Sau3AI | GATC | 1 cut(s) | 76 |
| Sau96I | GGNCC | 2 cut(s) | 49, 89 |
| SetI | ASST | 6 cut(s) | 60, 128, 135, 168, 178, 300 |
| SinI | GGWCC | 1 cut(s) | 49 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 71, 207 |
| SphI | GCATGC | 1 cut(s) | 115 |
| Sse9I | AATT | 1 cut(s) | 252 |
| TaiI | ACGT | 1 cut(s) | 60 |
| TasI | AATT | 1 cut(s) | 252 |
| TfiI | GAWTC | 2 cut(s) | 101, 277 |
| TscAI | CASTG | 1 cut(s) | 197 |
| TspDTI | ATGAA | 2 cut(s) | 93, 290 |
| TspRI | CASTG | 1 cut(s) | 197 |
| VpaK11BI | GGWCC | 1 cut(s) | 49 |
| XceI | RCATGY | 1 cut(s) | 115 |