Rorug07G0062300
HSP70 Family

Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000145
Physical Location & Seq
Forward (+)
4729100 .. 4733314
4215 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0062300.1

Sequence Viewer

Length: 2031 bp
ATGAGTCGTTCCCCTTCTTTTTCAGTGAAATCGGAATTTAGTCCAAAGCTTGACCCAGAATCTTTGCAGCAATGGGTTGTGGCCTTTTGTATCATCAGATTTGATCTTGAACAGGGTCAGCTTATTGAAGAGTGTTACCCACCTGGTTGTCTTACGCAAGATGAGGAGCTTGAAATTGCTTTCAGTTCATTCCCAGATTCCGTTTCCCAGCATCAGAATCGCTCAAGCATTCATGACTGTATATTCTTTTTCCGGTTTCGAAGGCGGGAACGTCCTCAAATGGACAATGTGTCTTCCACTGAGATCACTGAGAGTGATAAGAAGTTACCTACAAATTCCCCAGATGTAAAACCCCCTAGAAGTTCAAAAAGTAACAACATTTCTGATACTTCGAGATACATGTATGGTTATGTCTTTAATCGACAGAGACATGATGAGAGGCTAAAACGAGGTGGGGAGCAGAAGTCTGTGGTAATTTTGTCACACAGTCCTTTCTCTAGTGTGTTTAGACCTTTGTTACAAATCATGGGTCCTCTATATTTTGACATTGGAAGGAAGGCTCTTGAGCATATTGCTGCTTATGTTTCAATGTGGCCATGCCCTGTACCTGGTAAGCTAATGGAGCTTCCTATTGGGAATGCTGCTCTGAAAGTGAACTTGCCACCTGCCCACAGCTTGCCCTCAGAAAGTGGGACGTTGTTTGAAGAATCTGCATCCTCTATGGCTCCTTTTCTTCCTAATAATCAGTCGGTCCCACAGGGTCTTTTTCATGACTCAGATCTATTCGGCATCTTCAGGGGTCTATTGTTACAGCTTTGGGTTCTGTGGGAGTTGTTACTTATTGGTGAGCCCATTCTTATCATAGCTCCTACTCCTCCACAATGTTCTGAGGCTGTTGCTGGTCTTGTGAGTTTGGTAGCACCTCTACTTTGTAGTGTTGATTTTAGACCTTATTTCACCATCCATGACCCTGAATTTGCTCAGCTCAACTCGCTTCATGAAGGAGACACTTTTCCTCCTATGATTTTGGGTGTTACTAACCTCTTTTTCCTTAAATCTCTCCGTAATATGCCCCACATTGTTTCAGTTGGAAGCCCTGCTCCTAATACCAACCGGCTTCCTTTTTCTAGTAGGTCCTCTACTGGAAGACTTTCCGGTAGACCAGAAGGGTTTGGTCTTCAACAGCTTTCCCTTAAAAGATTTTCTCCTTCAAACTTGTTGAATGCTGTCAAGTTAAGGAGAGATGGTCCTCTTTGTCTCATGACAGAGCATAAGGAAGCCATTTGGAGCACTTATGCTGCAACAACTAAGCCTGACACTTCTATCCTCAATAGGCTTATAGATGCTGGGATGTCACCACGGGTTGAGGAGTCGATGTCAGTTGTTAACAATGAGATACTACGGCGTCATTTCTTGGAGCTCACCACCAACTTTTTGGCGCCTTTTGGCCCATATTTTAAGACTAGAACACCTTCAGAAGGATCTTCTCCGTTTGTAGACCCTCCTCCTCTCATTCCGTATAATGATGATGAATTTCTGGCAAGTTTATCAGCAAGAGGACCTGGGAAGTTTTTATCAAAAAGGATGAGATCTAACTGGCTGGACTTGTACAGGCGGTTTCTGCAAGGGCCCAACTTTACACCATGGTTTCAAAGAAGGCGTACTGTTGCTGAACAAGAGCAACATAGACTCTGGAAGCAGGCAAGAATTAACACCGACATACATCAGTTAATATCTAAGATGTCGGAATTGGAAGTTGTTGATTCCTTCAATGCTATTGAGAGACATATTCTTGGAGAAACACAGCTGCAGCAATCTGGAAGCAATGGCACAGATAGCACAGACTCTGCTGCGACTTGCCAAAAGCTAAAGGGAGATCTGCAGGCAGTTTTCAATGTGCTTCCCAAGGACGTGCAACAACTTCTACTTCTTAACCCAGAAAGGGCAGCTCTTCTGAAAGGAACCTCTGAAAATAAAAAACTTCTGGGGACCCCGCCTATACAAATTGGATCGCCAACGTCACCAAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

676

Amino Acids

75.98

Weight (kDa)

8.02

Isoelectric Point (pI)

67.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000145)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G08420
fragaria_vesca FvH4_1g11160 FvH4_2g08143 FvH4_3g36450 FvH4_3g36450 FvH4_3g36450 FvH4_3g36450 FvH4_3g36460 FvH4_3g36460 FvH4_3g45301 FvH4_4g27690 FvH4_4g27690 FvH4_4g27690 FvH4_4g27690 FvH4_5g09160 FvH4_5g09161 FvH4_5g09380 FvH4_5g22900 FvH4_6g42520 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550
malus_domestica MD02G1015700.v1.1 MD02G1058900.v1.1 MD02G1059000.v1.1 MD03G1170900.v1.1 MD04G1231500.v1.1 MD13G1044300.v1.1 MD16G1045100.v1.1
prunus_persica Prupe.1G308200_v2.0.a1 Prupe.2G125300_v2.0.a1 Prupe.6G307800_v2.0.a1 Prupe.6G351700_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1
pyrus_communis pycom02g01420 pycom02g04810 pycom03g12790 pycom03g12800 pycom12g17840 pycom12g17850 pycom12g17860 pycom13g03890 pycom16g03970
rosa_chinensis RchiOBHm_Chr2g0090081 RchiOBHm_Chr3g0469061 RchiOBHm_Chr3g0469081 RchiOBHm_Chr4g0435531 RchiOBHm_Chr5g0014021 RchiOBHm_Chr5g0014031 RchiOBHm_Chr5g0014041 RchiOBHm_Chr7g0190151 RchiOBHm_Chr7g0190161 RchiOBHm_Chr7g0190171 RchiOBHm_Chr7g0210441
rosa_laevigata RLG00000003683 RLG00000003687 RLG00000003688 RLG00000004561 RLG00000004643 RLG00000016083 RLG00000021085 RLG00000024381 RLG00000032065 RLG00000032067 RLG00000032071 RLG00000032072 RLG00000032075
rosa_multiflora Rmu_co8284349.1_g000001 Rmu_co8324735.1_g000001 Rmu_co8355915.1_g000001 Rmu_co8388905.1_g000001 Rmu_sc0000302.1_g000041 Rmu_sc0000302.1_g000050 Rmu_sc0001940.1_g000034 Rmu_sc0003807.1_g000011 Rmu_sc0005803.1_g000001 Rmu_sc0005803.1_g000007 Rmu_sc0007139.1_g000007 Rmu_sc0007767.1_g000001 Rmu_sc0007767.1_g000003 Rmu_sc0007767.1_g000006 Rmu_sc0007933.1_g000005 Rmu_sc0008587.1_g000004 Rmu_sc0008968.1_g000004 Rmu_sc0018491.1_g000002 Rmu_sc0022420.1_g000001 Rmu_sc0027700.1_g000001 Rmu_sc0036218.1_g000001
rosa_roxburghii Rroxscaffold_1G00062590 Rroxscaffold_1G00062600 Rroxscaffold_1G00062620 Rroxscaffold_1G00062630 Rroxscaffold_1G00062640 Rroxscaffold_1G00062670 Rroxscaffold_1G00062680 Rroxscaffold_2G00091430 Rroxscaffold_2G00151410 Rroxscaffold_3G00245340 Rroxscaffold_3G00255390 Rroxscaffold_3G00264820 Rroxscaffold_3G00264830 Rroxscaffold_3G00265870 Rroxscaffold_5G00355140 Rroxscaffold_5G00376760 Rroxscaffold_6G00412230
rosa_rugosa Rorug02G0005200 Rorug02G0468300 Rorug02G0468300 Rorug02G0532400 Rorug03G0098900 Rorug03G0099000 Rorug03G0099400 Rorug04G0286000 Rorug05G0014400 Rorug05G0014500 Rorug05G0014600 Rorug05G0014600 Rorug05G0014600 Rorug05G0014800 Rorug05G0014900 Rorug05G0015000 Rorug05G0015100 Rorug05G0015100 Rorug05G0441300 Rorug06G0495300 Rorug06G0502600 Rorug06G0502700 Rorug07G0062300
rosa_samantha Rh2AG050900 Rh2BG049600 Rh2CG051800 Rh2CG234600 Rh2DG051100 Rh3BG171300 Rh3BG171800 Rh3CG336700 Rh3DG203600 Rh3DG203800 Rh4AG341600 Rh4AG341700 Rh4BG349900 Rh4CG364600 Rh4DG344200 Rh5AG108800 Rh5AG108900 Rh5AG109000 Rh5AG109100 Rh5BG105500 Rh5CG117300 Rh5CG117500 Rh5CG117600 Rh5DG104200 Rh5DG104400 Rh5DG104500 Rh5DG104600 Rh7BG102300 Rh7BG110600 Rh7BG110700 Rh7BG118900 Rh7CG103600 Rh7CG112800 Rh7CG113000 Rh7CG200300 Rh7CG271100 Rh7DG111300 Rh7DG111400 Rh7DG194400 Rh7DG261800 Rh7DG261900
rosa_wichuraiana Rw0G014550 Rw0G014580 Rw2G004580 Rw3G013980 Rw3G013990 Rw3G014000 Rw3G014020 Rw4G029810 Rw5G009500 Rw5G009510 Rw5G009520 Rw5G009530 Rw7G008640 Rw7G009350 Rw7G021680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 673
Acc36I ACCTGC 1 cut(s) 673
AccB1I GGYRCC 1 cut(s) 1438
AccI GTMKAC 2 cut(s) 1159, 1497
AciI CCGC 3 cut(s) 265, 1615, 1994
AclWI GGATC 2 cut(s) 1489, 2017
AcoI YGGCCR 1 cut(s) 593
AcsI RAATTY 4 cut(s) 35, 334, 974, 1532
AcuI CTGAAG 2 cut(s) 778, 1458
AcyI GRCGYC 2 cut(s) 1405, 1439
AfaI GTAC 3 cut(s) 606, 1610, 1663
AfiI CCNNNNNNNGG 3 cut(s) 608, 1478, 1942
AflIII ACRYGT 1 cut(s) 399
AhdI GACNNNNNGTC 1 cut(s) 289
AjiI CACGTC 1 cut(s) 1912
AjnI CCWGG 3 cut(s) 142, 607, 1561
Alw21I GWGCWC 2 cut(s) 1292, 1422
Alw26I GTCTC 4 cut(s) 421, 999, 1262, 1777
AlwI GGATC 2 cut(s) 1489, 2017
AlwNI CAGNNNCTG 1 cut(s) 1847
AoxI GGCC 4 cut(s) 81, 593, 1447, 1628
ApaI GGGCCC 1 cut(s) 1632
ApeKI GCWGC 8 cut(s) 67, 575, 641, 1298, 1807, 1810, 1850, 1946
ApoI RAATTY 4 cut(s) 35, 334, 974, 1532
ArsI GACNNNNNNTTYG 4 cut(s) 514, 546, 959, 991
Asp700I GAANNNNTTC 2 cut(s) 1150, 1471
AspLEI GCGC 1 cut(s) 1441
AspS9I GGNCC 9 cut(s) 530, 751, 1134, 1247, 1448, 1559, 1628, 1629, 1989
AsuHPI GGTGA 5 cut(s) 857, 949, 1347, 1414, 2013
AsuII TTCGAA 1 cut(s) 259
AvaII GGWCC 6 cut(s) 530, 751, 1134, 1247, 1559, 1989
BaeGI GKGCMC 1 cut(s) 1632
BalI TGGCCA 1 cut(s) 595
BanI GGYRCC 1 cut(s) 1438
BanII GRGCYC 3 cut(s) 852, 1422, 1632
BbsI GAAGAC 3 cut(s) 285, 1153, 1169
Bbv12I GWGCWC 2 cut(s) 1292, 1422
BbvI GCAGC 8 cut(s) 79, 562, 628, 1285, 1794, 1822, 1837, 1958
BccI CCATC 2 cut(s) 968, 1238
BceAI ACGGC 1 cut(s) 1418
BcgI CGANNNNNNTGC 2 cut(s) 200, 234
BciT130I CCWGG 3 cut(s) 144, 609, 1563
BcoDI GTCTC 4 cut(s) 421, 999, 1262, 1777
BfaI CTAG 4 cut(s) 357, 498, 1128, 1464
BfmI CTRYAG 2 cut(s) 1808, 1880
BfoI RGCGCY 1 cut(s) 1442
BfuAI ACCTGC 1 cut(s) 673
BglII AGATCT 3 cut(s) 778, 1589, 1876
BisI GCNGC 8 cut(s) 68, 576, 642, 1299, 1808, 1811, 1851, 1947
BlpI GCTNAGC 1 cut(s) 981
BlsI GCNGC 8 cut(s) 69, 577, 643, 1300, 1809, 1812, 1852, 1948
Bme1390I CCNGG 3 cut(s) 144, 609, 1563
Bme18I GGWCC 6 cut(s) 530, 751, 1134, 1247, 1559, 1989
BmeRI GACNNNNNGTC 1 cut(s) 289
BmgBI CACGTC 1 cut(s) 1912
BmgT120I GGNCC 9 cut(s) 530, 751, 1134, 1247, 1448, 1559, 1628, 1629, 1989
BmiI GGNNCC 8 cut(s) 531, 726, 753, 1440, 1630, 1963, 1990, 1991
BmrFI CCNGG 3 cut(s) 144, 609, 1563
BmsI GCATC 4 cut(s) 220, 722, 798, 1333
BpiI GAAGAC 3 cut(s) 285, 1153, 1169
Bpu1102I GCTNAGC 1 cut(s) 981
Bpu14I TTCGAA 1 cut(s) 259
BpuEI CTTGAG 2 cut(s) 208, 584
BsaHI GRCGYC 2 cut(s) 1405, 1439
BsaJI CCNNGG 5 cut(s) 1358, 1562, 1643, 1905, 2024
BsaWI WCCGGW 2 cut(s) 252, 1154
BsaXI ACNNNNNCTCC 8 cut(s) 449, 479, 1000, 1030, 1231, 1261, 1361, 1391
Bsc4I CCNNNNNNNGG 3 cut(s) 608, 1478, 1942
Bse118I RCCGGY 1 cut(s) 1113
Bse1I ACTGG 2 cut(s) 1147, 1601
Bse3DI GCAATG 2 cut(s) 77, 1831
BseBI CCWGG 3 cut(s) 144, 609, 1563
BseDI CCNNGG 5 cut(s) 1358, 1562, 1643, 1905, 2024
BseGI GGATG 4 cut(s) 713, 960, 1356, 1590
BseLI CCNNNNNNNGG 3 cut(s) 608, 1478, 1942
BseMI GCAATG 2 cut(s) 77, 1831
BseMII CTCAG 6 cut(s) 291, 300, 696, 789, 879, 995
BseNI ACTGG 2 cut(s) 1147, 1601
BseRI GAGGAG 5 cut(s) 179, 864, 1382, 1494, 1497
BseSI GKGCMC 1 cut(s) 1632
BseXI GCAGC 8 cut(s) 79, 562, 628, 1285, 1794, 1822, 1837, 1958
BseYI CCCAGC 2 cut(s) 207, 1346
BshFI GGCC 4 cut(s) 83, 595, 1449, 1630
BshNI GGYRCC 1 cut(s) 1438
BsiHKAI GWGCWC 2 cut(s) 1292, 1422
BsiSI CCGG 3 cut(s) 253, 1114, 1155
BslFI GGGAC 3 cut(s) 706, 737, 2002
BslI CCNNNNNNNGG 3 cut(s) 608, 1478, 1942
BsmAI GTCTC 4 cut(s) 421, 999, 1262, 1777
BsmFI GGGAC 3 cut(s) 706, 737, 2002
BsmI GAATGC 3 cut(s) 228, 643, 1228
BsnI GGCC 4 cut(s) 83, 595, 1449, 1630
Bsp119I TTCGAA 1 cut(s) 259
Bsp120I GGGCCC 1 cut(s) 1628
Bsp1286I GDGCHC 4 cut(s) 852, 1292, 1422, 1632
Bsp1407I TGTACA 1 cut(s) 1608
Bsp143I GATC 7 cut(s) 103, 303, 778, 1481, 1589, 1876, 2009
Bsp1720I GCTNAGC 1 cut(s) 981
Bsp19I CCATGG 1 cut(s) 1643
BspACI CCGC 3 cut(s) 265, 1615, 1994
BspANI GGCC 4 cut(s) 83, 595, 1449, 1630
BspCNI CTCAG 6 cut(s) 292, 301, 695, 788, 880, 994
BspHI TCATGA 4 cut(s) 232, 769, 997, 1260
BspLI GGNNCC 8 cut(s) 531, 726, 753, 1440, 1630, 1963, 1990, 1991
BspMAI CTGCAG 2 cut(s) 1812, 1884
BspMI ACCTGC 1 cut(s) 673
BspPI GGATC 2 cut(s) 1489, 2017
BspQI GCTCTTC 1 cut(s) 1956
BspT104I TTCGAA 1 cut(s) 259
BspT107I GGYRCC 1 cut(s) 1438
BsrDI GCAATG 2 cut(s) 77, 1831
BsrFI RCCGGY 1 cut(s) 1113
BsrGI TGTACA 1 cut(s) 1608
BsrI ACTGG 2 cut(s) 1147, 1601
BssAI RCCGGY 1 cut(s) 1113
BssECI CCNNGG 5 cut(s) 1358, 1562, 1643, 1905, 2024
BssMI GATC 7 cut(s) 103, 303, 778, 1481, 1589, 1876, 2009
BssNI GRCGYC 2 cut(s) 1405, 1439
BssT1I CCWWGG 3 cut(s) 1643, 1905, 2024
Bst2UI CCWGG 3 cut(s) 144, 609, 1563
Bst4CI ACNGT 3 cut(s) 239, 488, 1666
Bst6I CTCTTC 2 cut(s) 123, 1956
BstACI GRCGYC 2 cut(s) 1405, 1439
BstAUI TGTACA 1 cut(s) 1608
BstBI TTCGAA 1 cut(s) 259
BstC8I GCNNGC 3 cut(s) 677, 1701, 1884
BstDEI CTNAG 8 cut(s) 300, 309, 682, 775, 888, 981, 1308, 1737
BstDSI CCRYGG 2 cut(s) 1358, 1643
BstENI CCTNNNNNAGG 1 cut(s) 1476
BstF5I GGATG 4 cut(s) 713, 960, 1356, 1590
BstH2I RGCGCY 1 cut(s) 1442
BstHHI GCGC 1 cut(s) 1441
BstKTI GATC 7 cut(s) 106, 306, 781, 1484, 1592, 1879, 2012
BstMAI GTCTC 4 cut(s) 421, 999, 1262, 1777
BstMBI GATC 7 cut(s) 103, 303, 778, 1481, 1589, 1876, 2009
BstMWI GCNNNNNNNGC 4 cut(s) 622, 991, 1621, 1836
BstNI CCWGG 3 cut(s) 144, 609, 1563
BstNSI RCATGY 1 cut(s) 403
BstSCI CCNGG 3 cut(s) 142, 607, 1561
BstSFI CTRYAG 2 cut(s) 1808, 1880
BstSLI GKGCMC 1 cut(s) 1632
BstV1I GCAGC 8 cut(s) 79, 562, 628, 1285, 1794, 1822, 1837, 1958
BstV2I GAAGAC 3 cut(s) 285, 1153, 1169
BstX2I RGATCY 4 cut(s) 778, 1481, 1589, 1876
BstXI CCANNNNNNTGG 1 cut(s) 1435
BstYI RGATCY 4 cut(s) 778, 1481, 1589, 1876
BsuRI GGCC 4 cut(s) 83, 595, 1449, 1630
BtgI CCRYGG 2 cut(s) 1358, 1643
BtrI CACGTC 1 cut(s) 1912
BtsCI GGATG 4 cut(s) 713, 960, 1356, 1590
BtsIMutI CAGTG 3 cut(s) 30, 297, 306
BveI ACCTGC 1 cut(s) 673
Cac8I GCNNGC 3 cut(s) 677, 1701, 1884
CaiI CAGNNNCTG 1 cut(s) 1847
CciI TCATGA 4 cut(s) 232, 769, 997, 1260
CfoI GCGC 1 cut(s) 1441
Cfr10I RCCGGY 1 cut(s) 1113
Cfr13I GGNCC 9 cut(s) 530, 751, 1134, 1247, 1448, 1559, 1628, 1629, 1989
CseI GACGC 1 cut(s) 1394
CsiI ACCWGGT 2 cut(s) 142, 607
Csp6I GTAC 3 cut(s) 605, 1609, 1662
CviQI GTAC 3 cut(s) 605, 1609, 1662
DdeI CTNAG 8 cut(s) 300, 309, 682, 775, 888, 981, 1308, 1737
DinI GGCGCC 1 cut(s) 1440
DpnI GATC 7 cut(s) 105, 305, 780, 1483, 1591, 1878, 2011
DpnII GATC 7 cut(s) 103, 303, 778, 1481, 1589, 1876, 2009
DriI GACNNNNNGTC 1 cut(s) 289
EaeI YGGCCR 1 cut(s) 593
Eam1104I CTCTTC 2 cut(s) 123, 1956
Eam1105I GACNNNNNGTC 1 cut(s) 289
EarI CTCTTC 2 cut(s) 123, 1956
Ecl136II GAGCTC 1 cut(s) 1420
Eco130I CCWWGG 3 cut(s) 1643, 1905, 2024
Eco24I GRGCYC 3 cut(s) 852, 1422, 1632
Eco47I GGWCC 6 cut(s) 530, 751, 1134, 1247, 1559, 1989
Eco53kI GAGCTC 1 cut(s) 1420
Eco57I CTGAAG 2 cut(s) 778, 1458
EcoICRI GAGCTC 1 cut(s) 1420
EcoNI CCTNNNNNAGG 1 cut(s) 1476
EcoO109I RGGNCCY 5 cut(s) 530, 1134, 1559, 1628, 1989
EcoRII CCWGG 3 cut(s) 142, 607, 1561
EcoT14I CCWWGG 3 cut(s) 1643, 1905, 2024
EcoT38I GRGCYC 3 cut(s) 852, 1422, 1632
EgeI GGCGCC 1 cut(s) 1440
EheI GGCGCC 1 cut(s) 1440
ErhI CCWWGG 3 cut(s) 1643, 1905, 2024
FaqI GGGAC 3 cut(s) 706, 737, 2002
FauI CCCGC 2 cut(s) 258, 2001
FblI GTMKAC 2 cut(s) 1159, 1497
Fnu4HI GCNGC 8 cut(s) 68, 576, 642, 1299, 1808, 1811, 1851, 1947
FokI GGATG 4 cut(s) 700, 947, 1363, 1597
FriOI GRGCYC 3 cut(s) 852, 1422, 1632
Fsp4HI GCNGC 8 cut(s) 68, 576, 642, 1299, 1808, 1811, 1851, 1947
FspBI CTAG 4 cut(s) 357, 498, 1128, 1464
GlaI GCGC 1 cut(s) 1440
GluI GCNGC 8 cut(s) 68, 576, 642, 1299, 1808, 1811, 1851, 1947
GsaI CCCAGC 2 cut(s) 211, 1350
HaeII RGCGCY 1 cut(s) 1442
HaeIII GGCC 4 cut(s) 83, 595, 1449, 1630
HapII CCGG 3 cut(s) 253, 1114, 1155
HgaI GACGC 1 cut(s) 1394
HhaI GCGC 1 cut(s) 1441
Hin1I GRCGYC 2 cut(s) 1405, 1439
Hin6I GCGC 1 cut(s) 1439
HinP1I GCGC 1 cut(s) 1439
HincII GTYRAC 1 cut(s) 1387
HindII GTYRAC 1 cut(s) 1387
HindIII AAGCTT 1 cut(s) 47
HpaI GTTAAC 1 cut(s) 1387
HpaII CCGG 3 cut(s) 253, 1114, 1155
HphI GGTGA 5 cut(s) 857, 949, 1347, 1414, 2013
Hpy166II GTNNAC 4 cut(s) 655, 1160, 1387, 1498
Hpy188III TCNNGA 9 cut(s) 107, 233, 393, 563, 770, 998, 1261, 1693, 1818
Hpy8I GTNNAC 4 cut(s) 655, 1160, 1387, 1498
HpyCH4III ACNGT 3 cut(s) 239, 488, 1666
HpyCH4IV ACGT 4 cut(s) 271, 695, 1911, 2018
HpyCH4V TGCA 7 cut(s) 67, 713, 1301, 1624, 1810, 1882, 1915
HpyF10VI GCNNNNNNNGC 4 cut(s) 622, 991, 1621, 1836
HpyF3I CTNAG 8 cut(s) 300, 309, 682, 775, 888, 981, 1308, 1737
HpySE526I ACGT 4 cut(s) 271, 695, 1911, 2018
Hsp92I GRCGYC 2 cut(s) 1405, 1439
HspAI GCGC 1 cut(s) 1439
KasI GGCGCC 1 cut(s) 1438
KflI GGGWCCC 1 cut(s) 1989
KspAI GTTAAC 1 cut(s) 1387
Kzo9I GATC 7 cut(s) 103, 303, 778, 1481, 1589, 1876, 2009
LguI GCTCTTC 1 cut(s) 1956
LmnI GCTCC 8 cut(s) 166, 457, 622, 730, 871, 1105, 1287, 1417
Lsp1109I GCAGC 8 cut(s) 79, 562, 628, 1285, 1794, 1822, 1837, 1958
LweI GCATC 4 cut(s) 220, 722, 798, 1333
MabI ACCWGGT 2 cut(s) 142, 607
MaeI CTAG 4 cut(s) 357, 498, 1128, 1464
MaeII ACGT 4 cut(s) 271, 695, 1911, 2018
MalI GATC 7 cut(s) 105, 305, 780, 1483, 1591, 1878, 2011
MboI GATC 7 cut(s) 103, 303, 778, 1481, 1589, 1876, 2009
MboII GAAGA 9 cut(s) 140, 285, 716, 725, 784, 1158, 1169, 1476, 1943
MflI RGATCY 4 cut(s) 778, 1481, 1589, 1876
MhlI GDGCHC 4 cut(s) 852, 1292, 1422, 1632
MlsI TGGCCA 1 cut(s) 595
MluCI AATT 9 cut(s) 35, 174, 334, 474, 974, 1532, 1707, 1748, 2004
MluNI TGGCCA 1 cut(s) 595
Mly113I GGCGCC 1 cut(s) 1439
MlyI GAGTC 5 cut(s) 13, 767, 1379, 1683, 1838
MmeI TCCRAC 2 cut(s) 1069, 1725
Mox20I TGGCCA 1 cut(s) 595
MroXI GAANNNNTTC 2 cut(s) 1150, 1471
MscI TGGCCA 1 cut(s) 595
MseI TTAA 9 cut(s) 417, 1053, 1194, 1235, 1386, 1458, 1710, 1730, 1932
Msp20I TGGCCA 1 cut(s) 595
MspA1I CMGCKG 1 cut(s) 1807
MspI CCGG 3 cut(s) 253, 1114, 1155
MspR9I CCNGG 3 cut(s) 144, 609, 1563
Mva1269I GAATGC 3 cut(s) 228, 643, 1228
MvaI CCWGG 3 cut(s) 144, 609, 1563
MwoI GCNNNNNNNGC 4 cut(s) 622, 991, 1621, 1836
NarI GGCGCC 1 cut(s) 1439
NcoI CCATGG 1 cut(s) 1643
NdeII GATC 7 cut(s) 103, 303, 778, 1481, 1589, 1876, 2009
NlaIV GGNNCC 8 cut(s) 531, 726, 753, 1440, 1630, 1963, 1990, 1991
NmuCI GTSAC 3 cut(s) 480, 1353, 2019
NspI RCATGY 1 cut(s) 403
NspV TTCGAA 1 cut(s) 259
PagI TCATGA 4 cut(s) 232, 769, 997, 1260
PaqCI CACCTGC 1 cut(s) 673
PciI ACATGT 1 cut(s) 399
PciSI GCTCTTC 1 cut(s) 1956
PctI GAATGC 3 cut(s) 228, 643, 1228
PdmI GAANNNNTTC 2 cut(s) 1150, 1471
PfeI GAWTC 5 cut(s) 59, 197, 217, 707, 1763
PkrI GCNGC 8 cut(s) 69, 577, 643, 1300, 1809, 1812, 1852, 1948
PleI GAGTC 5 cut(s) 12, 767, 1378, 1683, 1838
PluTI GGCGCC 1 cut(s) 1442
PpsI GAGTC 5 cut(s) 12, 767, 1378, 1683, 1838
PpuMI RGGWCCY 4 cut(s) 530, 1134, 1559, 1989
PscI ACATGT 1 cut(s) 399
Psp124BI GAGCTC 1 cut(s) 1422
Psp5II RGGWCCY 4 cut(s) 530, 1134, 1559, 1989
Psp6I CCWGG 3 cut(s) 142, 607, 1561
PspFI CCCAGC 2 cut(s) 207, 1346
PspGI CCWGG 3 cut(s) 142, 607, 1561
PspN4I GGNNCC 8 cut(s) 531, 726, 753, 1440, 1630, 1963, 1990, 1991
PspOMI GGGCCC 1 cut(s) 1628
PspPI GGNCC 9 cut(s) 530, 751, 1134, 1247, 1448, 1559, 1628, 1629, 1989
PspPPI RGGWCCY 4 cut(s) 530, 1134, 1559, 1989
PstI CTGCAG 2 cut(s) 1812, 1884
PstNI CAGNNNCTG 1 cut(s) 1847
PsuI RGATCY 4 cut(s) 778, 1481, 1589, 1876
PvuII CAGCTG 1 cut(s) 1807
RsaI GTAC 3 cut(s) 606, 1610, 1663
RsaNI GTAC 3 cut(s) 605, 1609, 1662
SacI GAGCTC 1 cut(s) 1422
SapI GCTCTTC 1 cut(s) 1956
SaqAI TTAA 9 cut(s) 417, 1053, 1194, 1235, 1386, 1458, 1710, 1730, 1932
SatI GCNGC 8 cut(s) 68, 576, 642, 1299, 1808, 1811, 1851, 1947
Sau3AI GATC 7 cut(s) 103, 303, 778, 1481, 1589, 1876, 2009
Sau96I GGNCC 9 cut(s) 530, 751, 1134, 1247, 1448, 1559, 1628, 1629, 1989
SchI GAGTC 5 cut(s) 13, 767, 1379, 1683, 1838
ScrFI CCNGG 3 cut(s) 144, 609, 1563
SduI GDGCHC 4 cut(s) 852, 1292, 1422, 1632
SexAI ACCWGGT 2 cut(s) 142, 607
SfaNI GCATC 4 cut(s) 220, 722, 798, 1333
SfcI CTRYAG 2 cut(s) 1808, 1880
SfoI GGCGCC 1 cut(s) 1440
SfuI TTCGAA 1 cut(s) 259
SinI GGWCC 6 cut(s) 530, 751, 1134, 1247, 1559, 1989
SmlI CTYRAG 2 cut(s) 223, 563
SmoI CTYRAG 2 cut(s) 223, 563
Sse9I AATT 9 cut(s) 35, 174, 334, 474, 974, 1532, 1707, 1748, 2004
SsiI CCGC 3 cut(s) 265, 1615, 1994
SspDI GGCGCC 1 cut(s) 1438
SspMI CTAG 4 cut(s) 357, 498, 1128, 1464
SstI GAGCTC 1 cut(s) 1422
StyD4I CCNGG 3 cut(s) 142, 607, 1561
StyI CCWWGG 3 cut(s) 1643, 1905, 2024
TaaI ACNGT 3 cut(s) 239, 488, 1666
TaiI ACGT 4 cut(s) 274, 698, 1914, 2021
TaqI TCGA 4 cut(s) 259, 392, 421, 1373
TaqII GACCGA 1 cut(s) 739
TasI AATT 9 cut(s) 35, 174, 334, 474, 974, 1532, 1707, 1748, 2004
TatI WGTACW 1 cut(s) 1608
TfiI GAWTC 5 cut(s) 59, 197, 217, 707, 1763
Tru1I TTAA 9 cut(s) 417, 1053, 1194, 1235, 1386, 1458, 1710, 1730, 1932
Tru9I TTAA 9 cut(s) 417, 1053, 1194, 1235, 1386, 1458, 1710, 1730, 1932
TscAI CASTG 3 cut(s) 30, 304, 313
TseFI GTSAC 3 cut(s) 480, 1353, 2019
TseI GCWGC 8 cut(s) 67, 575, 641, 1298, 1807, 1810, 1850, 1946
Tsp45I GTSAC 3 cut(s) 480, 1353, 2019
TspDTI ATGAA 6 cut(s) 177, 221, 758, 986, 1014, 1545
TspGWI ACGGA 4 cut(s) 190, 1052, 1479, 1506
TspRI CASTG 3 cut(s) 30, 304, 313
VpaK11BI GGWCC 6 cut(s) 530, 751, 1134, 1247, 1559, 1989
XagI CCTNNNNNAGG 1 cut(s) 1476
XapI RAATTY 4 cut(s) 35, 334, 974, 1532
XceI RCATGY 1 cut(s) 403
XcmI CCANNNNNNNNNTGG 1 cut(s) 1432
XmiI GTMKAC 2 cut(s) 1159, 1497
XmnI GAANNNNTTC 2 cut(s) 1150, 1471
XspI CTAG 4 cut(s) 357, 498, 1128, 1464
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.