FvH4_4g27690

Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000145
Physical Location & Seq
Reverse (-)
28561254 .. 28565447
4194 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g27690.t1

Sequence Viewer

Length: 1155 bp
ATGGAGAACGACGAAAACGGCGCCGTTCAGAGGAAGCTGAAGGTGAAGGGCAAGCACGACAAGCCCAAGCCTTGGGACGACGACCCGAACATCGACCGCTGGAAGATTGAGAAGTTTGACCCTTCCTGGAACGAAGGCGGCATGCTTGACGTCACCACTTTCTCTACCCTATTCCCTCGCTACAGAGAGAAGTATTTGCAAGACGCGTGGCCGGCGGTGAAATCTGCTTTAAAAGAGTACGGCATTTCTTGCGAATTGAATCTGGTTGAGGGTTCGATGACGGTGTCTACGACCAGGAAGACTAGAGACCCCTATATTATCGTCAAAGCTAGGGATCTTATTAAACTATTATCCAGAAGTGTTCCTGCTCCTCAGGCAATAAAAGTGCTGAATGATGAAATGCAATGTGACATCATCAAGATTAGCAACTTGGTCAGAAGTAAGGAAAAATTTATAAAACGAAGGCAACGTCTTATTGGCCCCAATTCCTCCACTTTAAAGGCCCTGGAAATACTGACAGGCTGTTATATTCTGATACAAGGAAACACTGTTGCTTCAATGGGTTCATTTAAAGGATTAAAGACAGTTAGGAGGATTGTGGAAGACTGCATTGAGAATAAAATGCATCCGATATTTCATATCAAGATTCTCATGGTAAGGAAAGAACTGGAAAAGGATCCAACTCTAGCGCAGGAGAACTGGGACAGATTTCTTCCGAAATTTAAGAAGAAAAATGTTAATCAACCCAAACCTAAGAAGAGTAAGAAGAAGAAACCAGAATATACACCCATACCACCTCCTCAACCACCTAGCAAGGTTGACATACAATTGGCAACTGGAGAATACTTTTTGAGTGACAAAGTGAAATCGGAAAAGAAGTGGAAAGAGCAGCAGGAGAGACAAGCTGGAAAAACAGCAGAAAACAAGCGAAAAAGAGAAGCTGCTTTTGTTCCTCCAGAGGAGCCTGTGGTACAGCATAACAAATCAGATGACGGTACCAAAGATGTCGCCGCCCTGGCCACGTGTCTGAAGAAAAAGGCAAAAGAGTATGGAAACAAAAAGTTGATTGAAAACGTAAATCCAGAAGCTTATCTTGCAGAGTCTGGAGAACCTTCAAAAAAGAAATCCAAGAAATCCAAGGGCTCAGAGTCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

385

Amino Acids

43.92

Weight (kDa)

9.66

Isoelectric Point (pI)

41.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KH_KRR1_1st PF17903 53 - 132 3.1e-31 Krr1 KH1 domain
KH_KRR1_2nd PF21800 134 - 225 1.1e-41 KRR1 small subunit processome component, second KH domain
KH_PNO1_2nd PF22891 137 - 209 7.2e-08 Eukaryotic type KH-domain (KH-domain type I)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000145)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G08420
fragaria_vesca FvH4_1g11160 FvH4_2g08143 FvH4_3g36450 FvH4_3g36450 FvH4_3g36450 FvH4_3g36450 FvH4_3g36460 FvH4_3g36460 FvH4_3g45301 FvH4_4g27690 FvH4_4g27690 FvH4_4g27690 FvH4_4g27690 FvH4_5g09160 FvH4_5g09161 FvH4_5g09380 FvH4_5g22900 FvH4_6g42520 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550
malus_domestica MD02G1015700.v1.1 MD02G1058900.v1.1 MD02G1059000.v1.1 MD03G1170900.v1.1 MD04G1231500.v1.1 MD13G1044300.v1.1 MD16G1045100.v1.1
prunus_persica Prupe.1G308200_v2.0.a1 Prupe.2G125300_v2.0.a1 Prupe.6G307800_v2.0.a1 Prupe.6G351700_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1
pyrus_communis pycom02g01420 pycom02g04810 pycom03g12790 pycom03g12800 pycom12g17840 pycom12g17850 pycom12g17860 pycom13g03890 pycom16g03970
rosa_chinensis RchiOBHm_Chr2g0090081 RchiOBHm_Chr3g0469061 RchiOBHm_Chr3g0469081 RchiOBHm_Chr4g0435531 RchiOBHm_Chr5g0014021 RchiOBHm_Chr5g0014031 RchiOBHm_Chr5g0014041 RchiOBHm_Chr7g0190151 RchiOBHm_Chr7g0190161 RchiOBHm_Chr7g0190171 RchiOBHm_Chr7g0210441
rosa_laevigata RLG00000003683 RLG00000003687 RLG00000003688 RLG00000004561 RLG00000004643 RLG00000016083 RLG00000021085 RLG00000024381 RLG00000032065 RLG00000032067 RLG00000032071 RLG00000032072 RLG00000032075
rosa_multiflora Rmu_co8284349.1_g000001 Rmu_co8324735.1_g000001 Rmu_co8355915.1_g000001 Rmu_co8388905.1_g000001 Rmu_sc0000302.1_g000041 Rmu_sc0000302.1_g000050 Rmu_sc0001940.1_g000034 Rmu_sc0003807.1_g000011 Rmu_sc0005803.1_g000001 Rmu_sc0005803.1_g000007 Rmu_sc0007139.1_g000007 Rmu_sc0007767.1_g000001 Rmu_sc0007767.1_g000003 Rmu_sc0007767.1_g000006 Rmu_sc0007933.1_g000005 Rmu_sc0008587.1_g000004 Rmu_sc0008968.1_g000004 Rmu_sc0018491.1_g000002 Rmu_sc0022420.1_g000001 Rmu_sc0027700.1_g000001 Rmu_sc0036218.1_g000001
rosa_roxburghii Rroxscaffold_1G00062590 Rroxscaffold_1G00062600 Rroxscaffold_1G00062620 Rroxscaffold_1G00062630 Rroxscaffold_1G00062640 Rroxscaffold_1G00062670 Rroxscaffold_1G00062680 Rroxscaffold_2G00091430 Rroxscaffold_2G00151410 Rroxscaffold_3G00245340 Rroxscaffold_3G00255390 Rroxscaffold_3G00264820 Rroxscaffold_3G00264830 Rroxscaffold_3G00265870 Rroxscaffold_5G00355140 Rroxscaffold_5G00376760 Rroxscaffold_6G00412230
rosa_rugosa Rorug02G0005200 Rorug02G0468300 Rorug02G0468300 Rorug02G0532400 Rorug03G0098900 Rorug03G0099000 Rorug03G0099400 Rorug04G0286000 Rorug05G0014400 Rorug05G0014500 Rorug05G0014600 Rorug05G0014600 Rorug05G0014600 Rorug05G0014800 Rorug05G0014900 Rorug05G0015000 Rorug05G0015100 Rorug05G0015100 Rorug05G0441300 Rorug06G0495300 Rorug06G0502600 Rorug06G0502700 Rorug07G0062300
rosa_samantha Rh2AG050900 Rh2BG049600 Rh2CG051800 Rh2CG234600 Rh2DG051100 Rh3BG171300 Rh3BG171800 Rh3CG336700 Rh3DG203600 Rh3DG203800 Rh4AG341600 Rh4AG341700 Rh4BG349900 Rh4CG364600 Rh4DG344200 Rh5AG108800 Rh5AG108900 Rh5AG109000 Rh5AG109100 Rh5BG105500 Rh5CG117300 Rh5CG117500 Rh5CG117600 Rh5DG104200 Rh5DG104400 Rh5DG104500 Rh5DG104600 Rh7BG102300 Rh7BG110600 Rh7BG110700 Rh7BG118900 Rh7CG103600 Rh7CG112800 Rh7CG113000 Rh7CG200300 Rh7CG271100 Rh7DG111300 Rh7DG111400 Rh7DG194400 Rh7DG261800 Rh7DG261900
rosa_wichuraiana Rw0G014550 Rw0G014580 Rw2G004580 Rw3G013980 Rw3G013990 Rw3G014000 Rw3G014020 Rw4G029810 Rw5G009500 Rw5G009510 Rw5G009520 Rw5G009530 Rw7G008640 Rw7G009350 Rw7G021680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 455
AatII GACGTC 1 cut(s) 153
Acc65I GGTACC 1 cut(s) 995
AccB1I GGYRCC 2 cut(s) 20, 995
AccB7I CCANNNNNTGG 1 cut(s) 72
AccI GTMKAC 1 cut(s) 287
AccII CGCG 1 cut(s) 206
AciI CCGC 4 cut(s) 97, 138, 215, 1011
AclWI GGATC 3 cut(s) 342, 671, 684
AcoI YGGCCR 2 cut(s) 209, 1017
AcsI RAATTY 2 cut(s) 449, 719
AcuI CTGAAG 2 cut(s) 59, 1049
AcvI CACGTG 1 cut(s) 1023
AcyI GRCGYC 2 cut(s) 21, 150
AfaI GTAC 3 cut(s) 239, 972, 997
AfiI CCNNNNNNNGG 2 cut(s) 30, 72
AflIII ACRYGT 2 cut(s) 204, 1022
AgsI TTSAA 4 cut(s) 259, 558, 1070, 1116
AjnI CCWGG 4 cut(s) 125, 293, 504, 1014
AluBI AGCT 5 cut(s) 37, 329, 905, 941, 1088
AluI AGCT 5 cut(s) 37, 329, 905, 941, 1088
Alw26I GTCTC 2 cut(s) 300, 892
AlwI GGATC 3 cut(s) 342, 671, 684
AlwNI CAGNNNCTG 1 cut(s) 1103
AoxI GGCC 4 cut(s) 209, 478, 501, 1017
ApeKI GCWGC 2 cut(s) 889, 941
ApoI RAATTY 2 cut(s) 449, 719
ArsI GACNNNNNNTTYG 2 cut(s) 454, 486
Asp718I GGTACC 1 cut(s) 995
AspLEI GCGC 2 cut(s) 23, 691
AspS9I GGNCC 2 cut(s) 479, 502
AsuHPI GGTGA 3 cut(s) 55, 145, 229
AxyI CCTNAGG 1 cut(s) 372
BalI TGGCCA 1 cut(s) 1019
BamHI GGATCC 1 cut(s) 676
BanI GGYRCC 2 cut(s) 20, 995
BanII GRGCYC 1 cut(s) 1145
BbrPI CACGTG 1 cut(s) 1023
BbsI GAAGAC 2 cut(s) 305, 609
BbvI GCAGC 2 cut(s) 901, 928
BceAI ACGGC 3 cut(s) 8, 34, 256
BciT130I CCWGG 4 cut(s) 127, 295, 506, 1016
BcoDI GTCTC 2 cut(s) 300, 892
BfaI CTAG 4 cut(s) 303, 330, 686, 810
BfmI CTRYAG 1 cut(s) 181
BfoI RGCGCY 1 cut(s) 24
BglI GCCNNNNNGGC 1 cut(s) 1016
BisI GCNGC 4 cut(s) 139, 890, 942, 1011
BlsI GCNGC 4 cut(s) 140, 891, 943, 1012
Bme1390I CCNGG 4 cut(s) 127, 295, 506, 1016
BmgT120I GGNCC 2 cut(s) 479, 502
BmiI GGNNCC 5 cut(s) 22, 481, 678, 963, 997
BmrFI CCNGG 4 cut(s) 127, 295, 506, 1016
BmrI ACTGGG 1 cut(s) 709
BmsI GCATC 1 cut(s) 634
BmuI ACTGGG 1 cut(s) 709
BpiI GAAGAC 2 cut(s) 305, 609
BpmI CTGGAG 3 cut(s) 858, 939, 1125
BsaAI YACGTR 1 cut(s) 1023
BsaHI GRCGYC 2 cut(s) 21, 150
BsaI GGTCTC 1 cut(s) 300
BsaJI CCNNGG 4 cut(s) 71, 504, 1014, 1137
Bsc4I CCNNNNNNNGG 2 cut(s) 30, 72
Bse118I RCCGGY 1 cut(s) 211
Bse1I ACTGG 3 cut(s) 672, 704, 841
Bse21I CCTNAGG 1 cut(s) 372
Bse3DI GCAATG 1 cut(s) 410
BseBI CCWGG 4 cut(s) 127, 295, 506, 1016
BseDI CCNNGG 4 cut(s) 71, 504, 1014, 1137
BseGI GGATG 1 cut(s) 625
BseLI CCNNNNNNNGG 2 cut(s) 30, 72
BseMI GCAATG 1 cut(s) 410
BseMII CTCAG 1 cut(s) 386
BseNI ACTGG 3 cut(s) 672, 704, 841
BseRI GAGGAG 3 cut(s) 360, 789, 974
BseXI GCAGC 2 cut(s) 901, 928
Bsh1236I CGCG 1 cut(s) 206
Bsh1285I CGRYCG 1 cut(s) 97
BshFI GGCC 4 cut(s) 211, 480, 503, 1019
BshNI GGYRCC 2 cut(s) 20, 995
BsiEI CGRYCG 1 cut(s) 97
BsiSI CCGG 1 cut(s) 212
BslFI GGGAC 2 cut(s) 89, 716
BslI CCNNNNNNNGG 2 cut(s) 30, 72
BsmAI GTCTC 2 cut(s) 300, 892
BsmFI GGGAC 2 cut(s) 89, 716
BsnI GGCC 4 cut(s) 211, 480, 503, 1019
Bso31I GGTCTC 1 cut(s) 300
Bsp1286I GDGCHC 1 cut(s) 1145
Bsp143I GATC 2 cut(s) 334, 676
BspACI CCGC 4 cut(s) 97, 138, 215, 1011
BspANI GGCC 4 cut(s) 211, 480, 503, 1019
BspCNI CTCAG 1 cut(s) 385
BspFNI CGCG 1 cut(s) 206
BspLI GGNNCC 5 cut(s) 22, 481, 678, 963, 997
BspPI GGATC 3 cut(s) 342, 671, 684
BspT107I GGYRCC 2 cut(s) 20, 995
BspTNI GGTCTC 1 cut(s) 300
BsrDI GCAATG 1 cut(s) 410
BsrFI RCCGGY 1 cut(s) 211
BsrI ACTGG 3 cut(s) 672, 704, 841
BssAI RCCGGY 1 cut(s) 211
BssECI CCNNGG 4 cut(s) 71, 504, 1014, 1137
BssMI GATC 2 cut(s) 334, 676
BssNI GRCGYC 2 cut(s) 21, 150
BssT1I CCWWGG 2 cut(s) 71, 1137
Bst2UI CCWGG 4 cut(s) 127, 295, 506, 1016
Bst4CI ACNGT 4 cut(s) 283, 550, 586, 995
Bst6I CTCTTC 1 cut(s) 752
BstACI GRCGYC 2 cut(s) 21, 150
BstAPI GCANNNNNTGC 1 cut(s) 249
BstBAI YACGTR 1 cut(s) 1023
BstC8I GCNNGC 3 cut(s) 53, 143, 213
BstDEI CTNAG 4 cut(s) 372, 753, 1144, 1152
BstF5I GGATG 1 cut(s) 625
BstFNI CGCG 1 cut(s) 206
BstH2I RGCGCY 1 cut(s) 24
BstHHI GCGC 2 cut(s) 23, 691
BstKTI GATC 2 cut(s) 337, 679
BstMAI GTCTC 2 cut(s) 300, 892
BstMBI GATC 2 cut(s) 334, 676
BstMCI CGRYCG 1 cut(s) 97
BstMWI GCNNNNNNNGC 6 cut(s) 61, 212, 249, 374, 1016, 1094
BstNI CCWGG 4 cut(s) 127, 295, 506, 1016
BstNSI RCATGY 1 cut(s) 145
BstSCI CCNGG 4 cut(s) 125, 293, 504, 1014
BstSFI CTRYAG 1 cut(s) 181
BstUI CGCG 1 cut(s) 206
BstV1I GCAGC 2 cut(s) 901, 928
BstV2I GAAGAC 2 cut(s) 305, 609
BstX2I RGATCY 2 cut(s) 334, 676
BstYI RGATCY 2 cut(s) 334, 676
Bsu36I CCTNAGG 1 cut(s) 372
BsuRI GGCC 4 cut(s) 211, 480, 503, 1019
BtsCI GGATG 1 cut(s) 625
BtsIMutI CAGTG 1 cut(s) 546
Cac8I GCNNGC 3 cut(s) 53, 143, 213
CaiI CAGNNNCTG 1 cut(s) 1103
CfoI GCGC 2 cut(s) 23, 691
Cfr10I RCCGGY 1 cut(s) 211
Cfr13I GGNCC 2 cut(s) 479, 502
CseI GACGC 1 cut(s) 212
Csp6I GTAC 3 cut(s) 238, 971, 996
CspCI CAANNNNNGTGG 2 cut(s) 188, 223
CviAII CATG 2 cut(s) 142, 652
CviQI GTAC 3 cut(s) 238, 971, 996
DdeI CTNAG 4 cut(s) 372, 753, 1144, 1152
DinI GGCGCC 1 cut(s) 22
DpnI GATC 2 cut(s) 336, 678
DpnII GATC 2 cut(s) 334, 676
DraI TTTAAA 3 cut(s) 231, 498, 571
EaeI YGGCCR 2 cut(s) 209, 1017
Eam1104I CTCTTC 1 cut(s) 752
EarI CTCTTC 1 cut(s) 752
Eco130I CCWWGG 2 cut(s) 71, 1137
Eco24I GRGCYC 1 cut(s) 1145
Eco31I GGTCTC 1 cut(s) 300
Eco57I CTGAAG 2 cut(s) 59, 1049
Eco72I CACGTG 1 cut(s) 1023
Eco81I CCTNAGG 1 cut(s) 372
EcoO109I RGGNCCY 1 cut(s) 502
EcoRII CCWGG 4 cut(s) 125, 293, 504, 1014
EcoT14I CCWWGG 2 cut(s) 71, 1137
EcoT22I ATGCAT 1 cut(s) 627
EcoT38I GRGCYC 1 cut(s) 1145
EgeI GGCGCC 1 cut(s) 22
EheI GGCGCC 1 cut(s) 22
ErhI CCWWGG 2 cut(s) 71, 1137
FaeI CATG 2 cut(s) 145, 655
FalI AAGNNNNNCTT 2 cut(s) 1077, 1109
FaqI GGGAC 2 cut(s) 89, 716
FatI CATG 2 cut(s) 141, 651
FblI GTMKAC 1 cut(s) 287
Fnu4HI GCNGC 4 cut(s) 139, 890, 942, 1011
FokI GGATG 1 cut(s) 612
FriOI GRGCYC 1 cut(s) 1145
Fsp4HI GCNGC 4 cut(s) 139, 890, 942, 1011
FspBI CTAG 4 cut(s) 303, 330, 686, 810
GlaI GCGC 2 cut(s) 22, 690
GluI GCNGC 4 cut(s) 139, 890, 942, 1011
GsuI CTGGAG 3 cut(s) 858, 939, 1125
HaeII RGCGCY 1 cut(s) 24
HaeIII GGCC 4 cut(s) 211, 480, 503, 1019
HapII CCGG 1 cut(s) 212
HgaI GACGC 1 cut(s) 212
HhaI GCGC 2 cut(s) 23, 691
Hin1I GRCGYC 2 cut(s) 21, 150
Hin1II CATG 2 cut(s) 145, 655
Hin6I GCGC 2 cut(s) 21, 689
HinP1I GCGC 2 cut(s) 21, 689
HincII GTYRAC 1 cut(s) 820
HindII GTYRAC 1 cut(s) 820
HindIII AAGCTT 1 cut(s) 1086
HinfI GANTC 4 cut(s) 259, 646, 1100, 1148
HpaII CCGG 1 cut(s) 212
HphI GGTGA 3 cut(s) 55, 145, 229
Hpy166II GTNNAC 2 cut(s) 288, 820
Hpy188I TCNGA 9 cut(s) 30, 437, 534, 630, 717, 871, 988, 1029, 1147
Hpy188III TCNNGA 6 cut(s) 354, 418, 643, 956, 1082, 1104
Hpy8I GTNNAC 2 cut(s) 288, 820
Hpy99I CGWCG 2 cut(s) 14, 83
HpyAV CCTTC 6 cut(s) 34, 40, 128, 132, 456, 1122
HpyCH4III ACNGT 4 cut(s) 283, 550, 586, 995
HpyCH4IV ACGT 4 cut(s) 150, 469, 1022, 1074
HpyCH4V TGCA 5 cut(s) 199, 403, 609, 625, 1097
HpyF10VI GCNNNNNNNGC 6 cut(s) 61, 212, 249, 374, 1016, 1094
HpyF3I CTNAG 4 cut(s) 372, 753, 1144, 1152
HpySE526I ACGT 4 cut(s) 150, 469, 1022, 1074
Hsp92I GRCGYC 2 cut(s) 21, 150
Hsp92II CATG 2 cut(s) 145, 655
HspAI GCGC 2 cut(s) 21, 689
KasI GGCGCC 1 cut(s) 20
KpnI GGTACC 1 cut(s) 999
KroI GCCGGC 1 cut(s) 211
KroNI GCCGGC 1 cut(s) 213
Kzo9I GATC 2 cut(s) 334, 676
LmnI GCTCC 2 cut(s) 373, 961
Lsp1109I GCAGC 2 cut(s) 901, 928
LweI GCATC 1 cut(s) 634
MaeI CTAG 4 cut(s) 303, 330, 686, 810
MaeII ACGT 4 cut(s) 150, 469, 1022, 1074
MaeIII GTNAC 3 cut(s) 151, 407, 854
MalI GATC 2 cut(s) 336, 678
MboI GATC 2 cut(s) 334, 676
MboII GAAGA 9 cut(s) 115, 310, 614, 704, 739, 769, 778, 781, 1042
MfeI CAATTG 1 cut(s) 827
MflI RGATCY 2 cut(s) 334, 676
MhlI GDGCHC 1 cut(s) 1145
MlsI TGGCCA 1 cut(s) 1019
MluCI AATT 5 cut(s) 254, 449, 484, 719, 827
MluI ACGCGT 1 cut(s) 204
MluNI TGGCCA 1 cut(s) 1019
Mly113I GGCGCC 1 cut(s) 21
MlyI GAGTC 1 cut(s) 1109
MmeI TCCRAC 1 cut(s) 704
Mox20I TGGCCA 1 cut(s) 1019
Mph1103I ATGCAT 1 cut(s) 627
MroNI GCCGGC 1 cut(s) 211
MscI TGGCCA 1 cut(s) 1019
MseI TTAA 7 cut(s) 230, 342, 497, 570, 578, 723, 738
Msp20I TGGCCA 1 cut(s) 1019
MspA1I CMGCKG 1 cut(s) 99
MspI CCGG 1 cut(s) 212
MspR9I CCNGG 4 cut(s) 127, 295, 506, 1016
MunI CAATTG 1 cut(s) 827
MvaI CCWGG 4 cut(s) 127, 295, 506, 1016
MvnI CGCG 1 cut(s) 206
MwoI GCNNNNNNNGC 6 cut(s) 61, 212, 249, 374, 1016, 1094
NaeI GCCGGC 1 cut(s) 213
NarI GGCGCC 1 cut(s) 21
NdeII GATC 2 cut(s) 334, 676
NgoMIV GCCGGC 1 cut(s) 211
NlaIII CATG 2 cut(s) 145, 655
NlaIV GGNNCC 5 cut(s) 22, 481, 678, 963, 997
NmuCI GTSAC 3 cut(s) 151, 407, 854
NsiI ATGCAT 1 cut(s) 627
NspI RCATGY 1 cut(s) 145
PaeI GCATGC 1 cut(s) 145
PcsI WCGNNNNNNNCGW 2 cut(s) 287, 466
PdiI GCCGGC 1 cut(s) 213
PfeI GAWTC 2 cut(s) 259, 646
PflFI GACNNNGTC 1 cut(s) 283
PflMI CCANNNNNTGG 1 cut(s) 72
PfoI TCCNGGA 1 cut(s) 125
PkrI GCNGC 4 cut(s) 140, 891, 943, 1012
PleI GAGTC 1 cut(s) 1108
PluTI GGCGCC 1 cut(s) 24
PmaCI CACGTG 1 cut(s) 1023
PmlI CACGTG 1 cut(s) 1023
PpsI GAGTC 1 cut(s) 1108
Ppu21I YACGTR 1 cut(s) 1023
PsiI TTATAA 1 cut(s) 455
Psp6I CCWGG 4 cut(s) 125, 293, 504, 1014
PspCI CACGTG 1 cut(s) 1023
PspGI CCWGG 4 cut(s) 125, 293, 504, 1014
PspN4I GGNNCC 5 cut(s) 22, 481, 678, 963, 997
PspPI GGNCC 2 cut(s) 479, 502
PstNI CAGNNNCTG 1 cut(s) 1103
PsuI RGATCY 2 cut(s) 334, 676
PsyI GACNNNGTC 1 cut(s) 283
RsaI GTAC 3 cut(s) 239, 972, 997
RsaNI GTAC 3 cut(s) 238, 971, 996
SaqAI TTAA 7 cut(s) 230, 342, 497, 570, 578, 723, 738
SatI GCNGC 4 cut(s) 139, 890, 942, 1011
Sau3AI GATC 2 cut(s) 334, 676
Sau96I GGNCC 2 cut(s) 479, 502
SchI GAGTC 1 cut(s) 1109
ScrFI CCNGG 4 cut(s) 127, 295, 506, 1016
SduI GDGCHC 1 cut(s) 1145
SfaNI GCATC 1 cut(s) 634
SfcI CTRYAG 1 cut(s) 181
SfoI GGCGCC 1 cut(s) 22
SphI GCATGC 1 cut(s) 145
Sse9I AATT 5 cut(s) 254, 449, 484, 719, 827
SsiI CCGC 4 cut(s) 97, 138, 215, 1011
SspDI GGCGCC 1 cut(s) 20
SspMI CTAG 4 cut(s) 303, 330, 686, 810
StyD4I CCNGG 4 cut(s) 125, 293, 504, 1014
StyI CCWWGG 2 cut(s) 71, 1137
TaaI ACNGT 4 cut(s) 283, 550, 586, 995
TaiI ACGT 4 cut(s) 153, 472, 1025, 1077
TaqI TCGA 2 cut(s) 93, 275
TasI AATT 5 cut(s) 254, 449, 484, 719, 827
TauI GCSGC 2 cut(s) 141, 1013
TfiI GAWTC 2 cut(s) 259, 646
Tru1I TTAA 7 cut(s) 230, 342, 497, 570, 578, 723, 738
Tru9I TTAA 7 cut(s) 230, 342, 497, 570, 578, 723, 738
TscAI CASTG 1 cut(s) 553
TseFI GTSAC 3 cut(s) 151, 407, 854
TseI GCWGC 2 cut(s) 889, 941
Tsp45I GTSAC 3 cut(s) 151, 407, 854
TspDTI ATGAA 3 cut(s) 411, 555, 626
TspRI CASTG 1 cut(s) 553
Tth111I GACNNNGTC 1 cut(s) 283
Van91I CCANNNNNTGG 1 cut(s) 72
XapI RAATTY 2 cut(s) 449, 719
XceI RCATGY 1 cut(s) 145
XmiI GTMKAC 1 cut(s) 287
XspI CTAG 4 cut(s) 303, 330, 686, 810
ZraI GACGTC 1 cut(s) 151
Zsp2I ATGCAT 1 cut(s) 627
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.